ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91m01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058439.1| Oryza sativa (japonica cultivar-group) Os03g0850200 (Os03g0850200) mRNA, complete cds Length = 1584 Score = 67.9 bits (34), Expect = 1e-07 Identities = 88/106 (83%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctgctatccccatgggcgccacc 1420 |||||||| ||||| || | ||||||||||||||||| | ||| ||||||||||| || Sbjct: 1366 gagctcctgccgttcgggtcggggcggcggatctgccccggcatcgccatgggcgccgcc 1425 Query: 1421 atcgtggagttcacgcttgctagcttgctgcattcgttcgactggg 1466 | ||||||||||||||| || | | ||||||| | |||||||||| Sbjct: 1426 aacgtggagttcacgctggccaacctgctgcactgcttcgactggg 1471 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgcatgatgtccattgctgc 364 |||||||| ||||||||||| || |||||||||| | |||||| || | | | |||||| Sbjct: 280 gtggtgtcctcgccggaggcggcgcaggaggtgctgaggacgcacgacgccgactgctgc 339 Query: 365 agccg 369 ||||| Sbjct: 340 agccg 344
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 67.9 bits (34), Expect = 1e-07 Identities = 88/106 (83%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctgctatccccatgggcgccacc 1420 |||||||| ||||| || | ||||||||||||||||| | ||| ||||||||||| || Sbjct: 35566958 gagctcctgccgttcgggtcggggcggcggatctgccccggcatcgccatgggcgccgcc 35567017 Query: 1421 atcgtggagttcacgcttgctagcttgctgcattcgttcgactggg 1466 | ||||||||||||||| || | | ||||||| | |||||||||| Sbjct: 35567018 aacgtggagttcacgctggccaacctgctgcactgcttcgactggg 35567063 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgca 348 |||| ||||||||| ||||||| |||| |||||||||||||||||| Sbjct: 21924547 tcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgca 21924592 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacg 346 |||| ||||||||| | ||||| |||| |||||||||||||||| Sbjct: 21884695 tcgtcgtgtcgtcggccgaggccgccagggaggtgctcaagacg 21884738 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1031 aatccgacggtgatgaagaaggcacaa 1057 ||||||| ||||||||||||||||||| Sbjct: 20357957 aatccgagggtgatgaagaaggcacaa 20357983 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgcatgatgtccattgctgc 364 |||||||| ||||||||||| || |||||||||| | |||||| || | | | |||||| Sbjct: 35564422 gtggtgtcctcgccggaggcggcgcaggaggtgctgaggacgcacgacgccgactgctgc 35564481 Query: 365 agccg 369 ||||| Sbjct: 35564482 agccg 35564486
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 67.9 bits (34), Expect = 1e-07 Identities = 88/106 (83%) Strand = Plus / Minus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctgctatccccatgggcgccacc 1420 |||||||| ||||| || | ||||||||||||||||| | ||| ||||||||||| || Sbjct: 10740 gagctcctgccgttcgggtcggggcggcggatctgccccggcatcgccatgggcgccgcc 10681 Query: 1421 atcgtggagttcacgcttgctagcttgctgcattcgttcgactggg 1466 | ||||||||||||||| || | | ||||||| | |||||||||| Sbjct: 10680 aacgtggagttcacgctggccaacctgctgcactgcttcgactggg 10635 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgcatgatgtccattgctgc 364 |||||||| ||||||||||| || |||||||||| | |||||| || | | | |||||| Sbjct: 13276 gtggtgtcctcgccggaggcggcgcaggaggtgctgaggacgcacgacgccgactgctgc 13217 Query: 365 agccg 369 ||||| Sbjct: 13216 agccg 13212
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 67.9 bits (34), Expect = 1e-07 Identities = 88/106 (83%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctgctatccccatgggcgccacc 1420 |||||||| ||||| || | ||||||||||||||||| | ||| ||||||||||| || Sbjct: 9849 gagctcctgccgttcgggtcggggcggcggatctgccccggcatcgccatgggcgccgcc 9908 Query: 1421 atcgtggagttcacgcttgctagcttgctgcattcgttcgactggg 1466 | ||||||||||||||| || | | ||||||| | |||||||||| Sbjct: 9909 aacgtggagttcacgctggccaacctgctgcactgcttcgactggg 9954 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgcatgatgtccattgctgc 364 |||||||| ||||||||||| || |||||||||| | |||||| || | | | |||||| Sbjct: 7313 gtggtgtcctcgccggaggcggcgcaggaggtgctgaggacgcacgacgccgactgctgc 7372 Query: 365 agccg 369 ||||| Sbjct: 7373 agccg 7377
>emb|CT828730.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA015A07, full insert sequence Length = 685 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgca 348 |||| ||||||||| ||||||| |||| |||||||||||||||||| Sbjct: 283 tcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgca 328
>ref|NM_001064697.1| Oryza sativa (japonica cultivar-group) Os06g0639800 (Os06g0639800) mRNA, complete cds Length = 1815 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccc 1398 |||||||||||||| ||||||||||||||||| ||||| Sbjct: 1391 gagctccttccgttcggcgccgggcggcggatgtgccc 1428 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtg 337 |||||||||||||||||||| || |||||||| Sbjct: 302 gtggtgtcgtcgccggaggcggcgcaggaggtg 334
>ref|NM_001057129.1| Oryza sativa (japonica cultivar-group) Os03g0594900 (Os03g0594900) mRNA, complete cds Length = 1762 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgca 348 |||| ||||||||| ||||||| |||| |||||||||||||||||| Sbjct: 318 tcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgca 363
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccc 1398 |||||||||||||| ||||||||||||||||| ||||| Sbjct: 25645164 gagctccttccgttcggcgccgggcggcggatgtgccc 25645201 Score = 48.1 bits (24), Expect = 0.10 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctg 1400 |||||||| ||||||||||| || |||||||| ||||||| Sbjct: 25703206 gagctcctgccgtttggcgctggccggcggatgtgccctg 25703245 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtg 337 |||||||||||||||||||| || |||||||| Sbjct: 25638916 gtggtgtcgtcgccggaggcggcgcaggaggtg 25638948
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgca 348 |||| ||||||||| ||||||| |||| |||||||||||||||||| Sbjct: 77498 tcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgca 77453 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacg 346 |||| ||||||||| | ||||| |||| |||||||||||||||| Sbjct: 117350 tcgtcgtgtcgtcggccgaggccgccagggaggtgctcaagacg 117307
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccc 1398 |||||||||||||| ||||||||||||||||| ||||| Sbjct: 68609 gagctccttccgttcggcgccgggcggcggatgtgccc 68646 Score = 48.1 bits (24), Expect = 0.10 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctg 1400 |||||||| ||||||||||| || |||||||| ||||||| Sbjct: 126651 gagctcctgccgtttggcgctggccggcggatgtgccctg 126690 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtg 337 |||||||||||||||||||| || |||||||| Sbjct: 62361 gtggtgtcgtcgccggaggcggcgcaggaggtg 62393
>dbj|AK106068.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H02, full insert sequence Length = 1775 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccc 1398 |||||||||||||| ||||||||||||||||| ||||| Sbjct: 1377 gagctccttccgttcggcgccgggcggcggatgtgccc 1414 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtg 337 |||||||||||||||||||| || |||||||| Sbjct: 288 gtggtgtcgtcgccggaggcggcgcaggaggtg 320
>dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D06, full insert sequence Length = 1763 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgca 348 |||| ||||||||| ||||||| |||| |||||||||||||||||| Sbjct: 319 tcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgca 364
>dbj|AK060486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E10, full insert sequence Length = 1815 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccc 1398 |||||||||||||| ||||||||||||||||| ||||| Sbjct: 1391 gagctccttccgttcggcgccgggcggcggatgtgccc 1428 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtg 337 |||||||||||||||||||| || |||||||| Sbjct: 302 gtggtgtcgtcgccggaggcggcgcaggaggtg 334
>emb|CT836150.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN009A03, full insert sequence Length = 1126 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Plus Query: 609 tcgacggcttcatcggtacggtggcgttcggga 641 |||||||| |||||||||||||||| ||||||| Sbjct: 632 tcgacggcatcatcggtacggtggccttcggga 664
>ref|NM_001065935.1| Oryza sativa (japonica cultivar-group) Os07g0293000 (Os07g0293000) mRNA, complete cds Length = 1227 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Plus Query: 609 tcgacggcttcatcggtacggtggcgttcggga 641 |||||||| |||||||||||||||| ||||||| Sbjct: 215 tcgacggcatcatcggtacggtggccttcggga 247
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Minus Query: 609 tcgacggcttcatcggtacggtggcgttcggga 641 |||||||| |||||||||||||||| ||||||| Sbjct: 11415733 tcgacggcatcatcggtacggtggccttcggga 11415701
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Minus Query: 609 tcgacggcttcatcggtacggtggcgttcggga 641 |||||||| |||||||||||||||| ||||||| Sbjct: 25253 tcgacggcatcatcggtacggtggccttcggga 25221
>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0656C04 Length = 143411 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Minus Query: 609 tcgacggcttcatcggtacggtggcgttcggga 641 |||||||| |||||||||||||||| ||||||| Sbjct: 116244 tcgacggcatcatcggtacggtggccttcggga 116212
>ref|NM_001064702.1| Oryza sativa (japonica cultivar-group) Os06g0641200 (Os06g0641200) mRNA, complete cds Length = 753 Score = 48.1 bits (24), Expect = 0.10 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1361 gagctccttccgtttggcgccgggcggcggatctgccctg 1400 |||||||| ||||||||||| || |||||||| ||||||| Sbjct: 520 gagctcctgccgtttggcgctggccggcggatgtgccctg 559
>ref|NM_001057126.1| Oryza sativa (japonica cultivar-group) Os03g0594100 (Os03g0594100) mRNA, complete cds Length = 2154 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacg 346 |||| ||||||||| | ||||| |||| |||||||||||||||| Sbjct: 581 tcgtcgtgtcgtcggccgaggccgccagggaggtgctcaagacg 624
>ref|NM_001052660.1| Oryza sativa (japonica cultivar-group) Os02g0187000 (Os02g0187000) mRNA, complete cds Length = 1572 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1139 gtcgtcaaagaaacactacgactgcacccgccggcgccgctgct 1182 |||||||| || || || || ||||||||||||||||||||||| Sbjct: 1105 gtcgtcaaggagacgctccggctgcacccgccggcgccgctgct 1148
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1139 gtcgtcaaagaaacactacgactgcacccgccggcgccgctgct 1182 |||||||| || || || || ||||||||||||||||||||||| Sbjct: 4829863 gtcgtcaaggagacgctccggctgcacccgccggcgccgctgct 4829906
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1139 gtcgtcaaagaaacactacgactgcacccgccggcgccgctgct 1182 |||||||| || || || || ||||||||||||||||||||||| Sbjct: 110453 gtcgtcaaggagacgctccggctgcacccgccggcgccgctgct 110496
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1139 gtcgtcaaagaaacactacgactgcacccgccggcgccgctgct 1182 |||||||| || || || || ||||||||||||||||||||||| Sbjct: 72022 gtcgtcaaggagacgctccggctgcacccgccggcgccgctgct 72065
>dbj|AB052131.1| Asparagus officinalis Asp-3 mRNA for cytochrome P450, complete cds Length = 1497 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1456 gttcgactgggagttgcctgacggcatg 1483 ||||||||||||||||||||| |||||| Sbjct: 1368 gttcgactgggagttgcctgatggcatg 1395
>dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A07, full insert sequence Length = 2154 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 303 tcgtggtgtcgtcgccggaggctgccaaggaggtgctcaagacg 346 |||| ||||||||| | ||||| |||| |||||||||||||||| Sbjct: 581 tcgtcgtgtcgtcggccgaggccgccagggaggtgctcaagacg 624
>gb|AF029858.1|AF029858 Sorghum bicolor cytochrome P450 CYP71E1 (CYP71E1) mRNA, complete cds Length = 1929 Score = 48.1 bits (24), Expect = 0.10 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1127 tacctgaaaatggtcgtcaaagaaacactacgactgcacccgccggcgccgctgct 1182 |||||||| ||||| ||||| || || || || ||||||||||||||| ||||||| Sbjct: 1215 tacctgaagatggtggtcaaggagacgctgcggctgcacccgccggcgacgctgct 1270
>dbj|AK240728.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043029C11, full insert sequence Length = 2663 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccctg 1400 ||||||||||| |||||||||||||| |||| Sbjct: 2308 ccgtttggcgcagggcggcggatctgtcctg 2338 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 184 gaggctgccaatcatagggcatctgcacct 213 ||||||||| ||||||||||| |||||||| Sbjct: 210 gaggctgcccatcatagggcacctgcacct 239
>ref|NM_001069849.1| Oryza sativa (japonica cultivar-group) Os09g0447500 (Os09g0447500) mRNA, complete cds Length = 1862 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 1097 ctgcacccgccggcgccgctgct 1119
>ref|NM_001057044.1| Oryza sativa (japonica cultivar-group) Os03g0568400 (Os03g0568400) mRNA, complete cds Length = 1380 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1031 aatccgacggtgatgaagaaggcacaa 1057 ||||||| ||||||||||||||||||| Sbjct: 850 aatccgagggtgatgaagaaggcacaa 876
>ref|NM_001049812.1| Oryza sativa (japonica cultivar-group) Os01g0543600 (Os01g0543600) mRNA, complete cds Length = 1203 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccctg 1400 ||||||||||| |||||||||||||| |||| Sbjct: 961 ccgtttggcgcagggcggcggatctgtcctg 991
>dbj|AK226798.1| Arabidopsis thaliana mRNA for putative cytochrome P450, complete cds, clone: RAFL07-89-K10 Length = 1769 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1298 cctgaggagttttacccggagaggttt 1324 |||||||||||| |||||||||||||| Sbjct: 1297 cctgaggagtttaacccggagaggttt 1323
>gb|DQ446703.1| Arabidopsis thaliana clone pENTR221-At3g26270 cytochrome P450 71B25 (At3g26270) mRNA, complete cds Length = 1506 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1298 cctgaggagttttacccggagaggttt 1324 |||||||||||| |||||||||||||| Sbjct: 1237 cctgaggagtttaacccggagaggttt 1263
>ref|NM_113534.1| Arabidopsis thaliana CYP71B25; heme binding / iron ion binding / monooxygenase/ oxygen binding (CYP71B25) mRNA, complete cds Length = 1551 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1298 cctgaggagttttacccggagaggttt 1324 |||||||||||| |||||||||||||| Sbjct: 1242 cctgaggagtttaacccggagaggttt 1268
>ref|NM_113530.2| Arabidopsis thaliana CYP71B24; heme binding / iron ion binding / monooxygenase/ oxygen binding (CYP71B24) mRNA, complete cds Length = 1508 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1298 cctgaggagttttacccggagaggttt 1324 |||||||||||| |||||||||||||| Sbjct: 1239 cctgaggagtttaacccggagaggttt 1265
>dbj|AB124855.1| Triticum aestivum CYP71C6v3 mRNA for P450, complete cds Length = 1844 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgc 1396 |||||||| |||||||||||||||||| Sbjct: 1398 ccgtttggggccgggcggcggatctgc 1424
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 16664747 ctgcacccgccggcgccgctgct 16664725 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1256 aacgtgtgggctatggggagggaccctgc 1284 ||||||||||| || |||||||||||||| Sbjct: 20469106 aacgtgtgggcgatcgggagggaccctgc 20469134 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||| |||||||||||||| Sbjct: 20474343 ccgttcggcgccggccggcggatctgccc 20474371
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccctg 1400 ||||||||||| |||||||||||||| |||| Sbjct: 20122611 ccgtttggcgcagggcggcggatctgtcctg 20122641 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 184 gaggctgccaatcatagggcatctgcacct 213 ||||||||| ||||||||||| |||||||| Sbjct: 20120512 gaggctgcccatcatagggcacctgcacct 20120541
>gb|AF321860.1|AF321860 Lolium rigidum clone Lol-20-f putative cytochrome P450 mRNA, complete cds Length = 1782 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 1157 ctgcacccgccggcgccgctgct 1179
>gb|AF321859.1|AF321859 Lolium rigidum clone Lol-20-d putative cytochrome P450 mRNA, complete cds Length = 1906 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 1175 ctgcacccgccggcgccgctgct 1197
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccctg 1400 ||||||||||| |||||||||||||| |||| Sbjct: 28989 ccgtttggcgcagggcggcggatctgtcctg 29019 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 184 gaggctgccaatcatagggcatctgcacct 213 ||||||||| ||||||||||| |||||||| Sbjct: 26890 gaggctgcccatcatagggcacctgcacct 26919
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccctg 1400 ||||||||||| |||||||||||||| |||| Sbjct: 120573 ccgtttggcgcagggcggcggatctgtcctg 120603 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 184 gaggctgccaatcatagggcatctgcacct 213 ||||||||| ||||||||||| |||||||| Sbjct: 118474 gaggctgcccatcatagggcacctgcacct 118503
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1031 aatccgacggtgatgaagaaggcacaa 1057 ||||||| ||||||||||||||||||| Sbjct: 9228 aatccgagggtgatgaagaaggcacaa 9254
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 72886 ctgcacccgccggcgccgctgct 72864
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 13441 ctgcacccgccggcgccgctgct 13419
>dbj|AB127341.1| Muscari armeniacum MaP450 gene for cytochrome P450, complete cds Length = 1669 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1454 tcgttcgactgggagttgcctga 1476 ||||||||||||||||||||||| Sbjct: 1461 tcgttcgactgggagttgcctga 1483
>dbj|AB127340.1| Muscari armeniacum MaP450 mRNA for cytochrome P450, complete cds Length = 1621 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1454 tcgttcgactgggagttgcctga 1476 ||||||||||||||||||||||| Sbjct: 1390 tcgttcgactgggagttgcctga 1412
>dbj|AB024038.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTC11 Length = 83859 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1298 cctgaggagttttacccggagaggttt 1324 |||||||||||| |||||||||||||| Sbjct: 46106 cctgaggagtttaacccggagaggttt 46080 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1298 cctgaggagttttacccggagaggttt 1324 |||||||||||| |||||||||||||| Sbjct: 75508 cctgaggagtttaacccggagaggttt 75482
>dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D04, full insert sequence Length = 1862 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1160 ctgcacccgccggcgccgctgct 1182 ||||||||||||||||||||||| Sbjct: 1097 ctgcacccgccggcgccgctgct 1119
>emb|CR378203.1| Pinus pinaster SSR, clone PPC2G09 Length = 573 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 143 aagaagaagaagaacaccatccgtcttcctc 173 |||||||||||||| ||||| |||||||||| Sbjct: 197 aagaagaagaagaagaccatacgtcttcctc 227
>gb|AC193793.1| Gallus gallus BAC clone CH261-30P23 from chromosome z, complete sequence Length = 181135 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1045 gaagaaggcacaaacagagata 1066 |||||||||||||||||||||| Sbjct: 63061 gaagaaggcacaaacagagata 63082
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 591 agaccctcttcacgctcatcgacggc 616 |||||||| ||||||||||||||||| Sbjct: 2597659 agaccctcgtcacgctcatcgacggc 2597634
>ref|NM_001059254.1| Oryza sativa (japonica cultivar-group) Os04g0407900 (Os04g0407900) mRNA, partial cds Length = 1698 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1377 gcgccgggcggcggatctgccc 1398 |||||||||||||||||||||| Sbjct: 1207 gcgccgggcggcggatctgccc 1228
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 591 agaccctcttcacgctcatcgacggc 616 |||||||| ||||||||||||||||| Sbjct: 2667991 agaccctcgtcacgctcatcgacggc 2668016
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1377 gcgccgggcggcggatctgccc 1398 |||||||||||||||||||||| Sbjct: 20222272 gcgccgggcggcggatctgccc 20222293
>dbj|AK064758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G11, full insert sequence Length = 1698 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1377 gcgccgggcggcggatctgccc 1398 |||||||||||||||||||||| Sbjct: 1207 gcgccgggcggcggatctgccc 1228
>gb|AY108916.1| Zea mays PCO123628 mRNA sequence Length = 535 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1241 acaaggatcttcgtgaacgtgtgggctatggggaggga 1278 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 432 acaaggattttcgtgaacgtttgggcaatgggaaggga 395
>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete sequence Length = 213347 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 912 ggaaggggcaagggaaggtcac 933 |||||||||||||||||||||| Sbjct: 130713 ggaaggggcaagggaaggtcac 130734
>emb|CT829590.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115K10, full insert sequence Length = 1779 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||||||| |||||||||| Sbjct: 1443 ccgttcggcgccgggcggaggatctgccc 1471
>emb|CT835106.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA031B19, full insert sequence Length = 759 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 305 gtggtgtcgtcgccggaggctgccaaggaggtgctcaagacgcatgatgtccattgctgc 364 |||||||| ||||||||||| || |||||||||| | |||||| || | | | |||||| Sbjct: 346 gtggtgtcctcgccggaggcggcgcaggaggtgctgaggacgcacgacgccgactgctgc 405 Query: 365 agccg 369 ||||| Sbjct: 406 agccg 410
>ref|NM_001070674.1| Oryza sativa (japonica cultivar-group) Os10g0139700 (Os10g0139700) mRNA, complete cds Length = 1789 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||||||| |||||||||| Sbjct: 1444 ccgttcggcgccgggcggaggatctgccc 1472
>ref|NM_001070563.1| Oryza sativa (japonica cultivar-group) Os10g0108700 (Os10g0108700) mRNA, complete cds Length = 1504 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 cggtggcacgacgacgagctc 993 ||||||||||||||||||||| Sbjct: 838 cggtggcacgacgacgagctc 818
>ref|NM_001070283.1| Oryza sativa (japonica cultivar-group) Os09g0530300 (Os09g0530300) mRNA, complete cds Length = 1764 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||| |||||||||||||| Sbjct: 1356 ccgttcggcgccggccggcggatctgccc 1384
>gb|DQ399840.1| Hibiscus cannabinus cinnamate-4-hydroxylate-like (c4h) mRNA, partial cds Length = 1335 Score = 42.1 bits (21), Expect = 6.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1220 gggtacgacatccccgcgaagacaaggatcttcgtgaacgtgtgg 1264 |||||||||||||||||| ||| | |||| ||||||||| |||| Sbjct: 1028 gggtacgacatccccgcggagagcaagatcctcgtgaacgcgtgg 1072
>gb|AY674634.1| Sapria himalayana 18S ribosomal RNA gene, partial sequence Length = 1697 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1580 atgaatttatactgtgaaact 1600 ||||||||||||||||||||| Sbjct: 18 atgaatttatactgtgaaact 38
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 cgcggccatcgtggtgtcgtc 315 ||||||||||||||||||||| Sbjct: 2242026 cgcggccatcgtggtgtcgtc 2242006
>gb|AY290727.1| Triticum aestivum putative cytochrome P450-like mRNA, partial sequence Length = 544 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| ||||||||||||||| ||||||| Sbjct: 108 ccgttcggcgccgggcggcgggtctgccc 136
>gb|L24048.2|RZIRG18S Rhizanthes infanticida 18S ribosomal RNA gene, partial sequence Length = 1786 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1580 atgaatttatactgtgaaact 1600 ||||||||||||||||||||| Sbjct: 66 atgaatttatactgtgaaact 86
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 cggtggcacgacgacgagctc 993 ||||||||||||||||||||| Sbjct: 562993 cggtggcacgacgacgagctc 562973
>gb|AF038946.1| Ambystoma tigrinum blue cone visual pigment mRNA, complete cds Length = 1479 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 643 catgaagggcgccaagctcatgaag 667 |||||||| |||||||||||||||| Sbjct: 331 catgaaggccgccaagctcatgaag 307
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 cggtggcacgacgacgagctc 993 ||||||||||||||||||||| Sbjct: 30601 cggtggcacgacgacgagctc 30581
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 cggtggcacgacgacgagctc 993 ||||||||||||||||||||| Sbjct: 562993 cggtggcacgacgacgagctc 562973 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||||||| |||||||||| Sbjct: 2433288 ccgttcggcgccgggcggaggatctgccc 2433260
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||||||| |||||||||| Sbjct: 90020 ccgttcggcgccgggcggaggatctgccc 89992
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1256 aacgtgtgggctatggggagggaccctgc 1284 ||||||||||| || |||||||||||||| Sbjct: 97245 aacgtgtgggcgatcgggagggaccctgc 97273 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||| |||||||||||||| Sbjct: 102482 ccgttcggcgccggccggcggatctgccc 102510
>dbj|AK120674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161I12, full insert sequence Length = 1763 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||| |||||||||||||| Sbjct: 1355 ccgttcggcgccggccggcggatctgccc 1383
>dbj|AK120444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099E24, full insert sequence Length = 1765 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||| |||||||||||||| Sbjct: 1357 ccgttcggcgccggccggcggatctgccc 1385
>dbj|AK067458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107H17, full insert sequence Length = 1792 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1370 ccgtttggcgccgggcggcggatctgccc 1398 ||||| |||||||||||| |||||||||| Sbjct: 1447 ccgttcggcgccgggcggaggatctgccc 1475
>dbj|AK060361.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H07, full insert sequence Length = 1465 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 cggtggcacgacgacgagctc 993 ||||||||||||||||||||| Sbjct: 793 cggtggcacgacgacgagctc 773
>dbj|AK060060.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F11, full insert sequence Length = 1504 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 cggtggcacgacgacgagctc 993 ||||||||||||||||||||| Sbjct: 838 cggtggcacgacgacgagctc 818
>gb|AY104083.1| Zea mays PCO090231 mRNA sequence Length = 1749 Score = 42.1 bits (21), Expect = 6.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1248 tcttcgtgaacgtgtgggctatggggagggaccctgc 1284 ||||||| ||||||||||| || ||| |||||||||| Sbjct: 1189 tcttcgtcaacgtgtgggccatcgggcgggaccctgc 1225 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 248,111,099 Number of extensions: 13397561 Number of successful extensions: 856215 Number of sequences better than 10.0: 80 Number of HSP's gapped: 856215 Number of HSP's successfully gapped: 104 Length of query: 1634 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1611 Effective length of database: 18,503,978,556 Effective search space: 29809909453716 Effective search space used: 29809909453716 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
