ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94m02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054489.1| Oryza sativa (japonica cultivar-group) Os02g0720600 (Os02g0720600) mRNA, complete cds Length = 1735 Score = 278 bits (140), Expect = 5e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 887 ggcggggagcagctcagcgtggcgccctccgtcttctccgccgggtccgtgatggactcc 946 |||||| |||||||| | || |||| || || ||| |||||||||||||| |||||||| Sbjct: 1029 ggcgggaagcagctcgggctgtcgccgtcggtgttcgccgccgggtccgtggtggactcc 1088 Query: 947 gggaccatcatcacgcggctgccgcccacggcgtacacggcgctcaagacggcgttcaag 1006 || || |||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 1089 ggcacgatcatcacgcggctgccgccgacggcgtactcggcgctgtcgtcggcgttcaag 1148 Query: 1007 gacggcatgaagcagtacccgacggcgccggccaggagcatcctggacacgtgcttcgac 1066 | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 1149 gccggcatgaagcagtaccggtcggcgccggccaggagcatcctcgacacgtgcttcgac 1208 Query: 1067 ttcagcggccaggacaacgtcaccatacccaccgtcgctttggtgttcgacggcggcaag 1126 ||| ||||||| | | || ||||||| |||||||| |||||||| ||||||| Sbjct: 1209 ttcgccggccagacccagatctccataccgaccgtcgcgctggtgttctccggcggcgcc 1268 Query: 1127 gtcgtcgacctcgacgccaacgggatcatattcggcagctgcctcgcgttcacggacacc 1186 | | ||||||||||| | ||||||||||| | ||||| ||||||||||||| | | |||| Sbjct: 1269 gccatcgacctcgacccgaacgggatcatgtacggcaactgcctcgcgttcgccgccacc 1328 Query: 1187 ggcgacgacggaagcaccggcatcatcggcaacgtgcagcagaggacccttgaggtgctc 1246 ||||||||||| | ||||||||||||||| |||||||||||| |||| | ||||| || Sbjct: 1329 ggcgacgacgggaccaccggcatcatcgggaacgtgcagcagcggacgttcgaggtcctg 1388 Query: 1247 tacgacgt 1254 |||||||| Sbjct: 1389 tacgacgt 1396 Score = 145 bits (73), Expect = 5e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 606 ccgtcaagggtttccagttcggctgcagccgcgtcgaggaggggttcggcgacaagaccg 665 |||| ||||| ||||||||||| ||||||| ||||||| ||| ||| ||||| |||||| Sbjct: 748 ccgtgaagggattccagttcgggtgcagccacgtcgagtcgggattcagcgaccagaccg 807 Query: 666 acgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgt 725 ||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||| ||| Sbjct: 808 acgggctcatgggcctcggcggcggcgcgcagtcgctcgtgtcgcagacggcggcggcgt 867 Query: 726 acggcaaggccttctcctactgcctcccg 754 |||| || ||||||| |||||||||||| Sbjct: 868 acgggaattccttctcgtactgcctcccg 896 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 384 gtgccgaccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 443 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 444 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 503 Query: 499 cactgcaac 507 || |||||| Sbjct: 504 cagtgcaac 512 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 163 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 222 |||||||||||||||| || | ||| ||||||||| |||||| |||||||| ||||| Sbjct: 153 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 212 Query: 223 aaccacaggcatggcccgtgctcgccgg 250 |||||| |||| || || |||||||||| Sbjct: 213 aaccaccggcacgggccatgctcgccgg 240 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1357 taggctgctctcatgtggttgtcttcttgtttctagttgcgaggtaag 1404 |||| |||||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 1512 taggttgctctcatgtggtcgtctacttgtttgtggttgcgaggtaag 1559
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 278 bits (140), Expect = 5e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 887 ggcggggagcagctcagcgtggcgccctccgtcttctccgccgggtccgtgatggactcc 946 |||||| |||||||| | || |||| || || ||| |||||||||||||| |||||||| Sbjct: 29911687 ggcgggaagcagctcgggctgtcgccgtcggtgttcgccgccgggtccgtggtggactcc 29911628 Query: 947 gggaccatcatcacgcggctgccgcccacggcgtacacggcgctcaagacggcgttcaag 1006 || || |||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 29911627 ggcacgatcatcacgcggctgccgccgacggcgtactcggcgctgtcgtcggcgttcaag 29911568 Query: 1007 gacggcatgaagcagtacccgacggcgccggccaggagcatcctggacacgtgcttcgac 1066 | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 29911567 gccggcatgaagcagtaccggtcggcgccggccaggagcatcctcgacacgtgcttcgac 29911508 Query: 1067 ttcagcggccaggacaacgtcaccatacccaccgtcgctttggtgttcgacggcggcaag 1126 ||| ||||||| | | || ||||||| |||||||| |||||||| ||||||| Sbjct: 29911507 ttcgccggccagacccagatctccataccgaccgtcgcgctggtgttctccggcggcgcc 29911448 Query: 1127 gtcgtcgacctcgacgccaacgggatcatattcggcagctgcctcgcgttcacggacacc 1186 | | ||||||||||| | ||||||||||| | ||||| ||||||||||||| | | |||| Sbjct: 29911447 gccatcgacctcgacccgaacgggatcatgtacggcaactgcctcgcgttcgccgccacc 29911388 Query: 1187 ggcgacgacggaagcaccggcatcatcggcaacgtgcagcagaggacccttgaggtgctc 1246 ||||||||||| | ||||||||||||||| |||||||||||| |||| | ||||| || Sbjct: 29911387 ggcgacgacgggaccaccggcatcatcgggaacgtgcagcagcggacgttcgaggtcctg 29911328 Query: 1247 tacgacgt 1254 |||||||| Sbjct: 29911327 tacgacgt 29911320 Score = 145 bits (73), Expect = 5e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 606 ccgtcaagggtttccagttcggctgcagccgcgtcgaggaggggttcggcgacaagaccg 665 |||| ||||| ||||||||||| ||||||| ||||||| ||| ||| ||||| |||||| Sbjct: 29911968 ccgtgaagggattccagttcgggtgcagccacgtcgagtcgggattcagcgaccagaccg 29911909 Query: 666 acgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgt 725 ||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||| ||| Sbjct: 29911908 acgggctcatgggcctcggcggcggcgcgcagtcgctcgtgtcgcagacggcggcggcgt 29911849 Query: 726 acggcaaggccttctcctactgcctcccg 754 |||| || ||||||| |||||||||||| Sbjct: 29911848 acgggaattccttctcgtactgcctcccg 29911820 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 29912332 gtgccgaccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 29912273 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 29912272 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 29912213 Query: 499 cactgcaac 507 || |||||| Sbjct: 29912212 cagtgcaac 29912204 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 957 tcacgcggctgccgcccacggcgtacacggcgct 990 |||||||||||||||||||||||||| ||||||| Sbjct: 29908943 tcacgcggctgccgcccacggcgtactcggcgct 29908976 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 1357 taggctgctctcatgtggttgtcttcttgtttctagttgcgaggtaag 1404 |||| |||||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 29911204 taggttgctctcatgtggtcgtctacttgtttgtggttgcgaggtaag 29911157 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 191 cgtcgtcgtccagtggagccacggtgccgttgaaccacaggcatggcccgtgctcgccgg 250 ||||||||| |||||| |||||||| ||||||||||| |||| || || |||||||||| Sbjct: 29912535 cgtcgtcgttgagtggaaccacggtggcgttgaaccaccggcacgggccatgctcgccgg 29912476 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Plus Query: 472 gacaccgggagcgacgtgtcgtggttgcactgcaa 506 |||||||| ||||||||||||||| |||| ||||| Sbjct: 29908330 gacaccggcagcgacgtgtcgtgggtgcagtgcaa 29908364 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1022 tacccgacggcgccggccaggagcatcctggacacgtgcttcgacttca 1070 |||||| |||||||||| | | | ||||||||||| |||| |||||||| Sbjct: 29909014 tacccgtcggcgccggcgacggggatcctggacacctgctacgacttca 29909062
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 278 bits (140), Expect = 5e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 887 ggcggggagcagctcagcgtggcgccctccgtcttctccgccgggtccgtgatggactcc 946 |||||| |||||||| | || |||| || || ||| |||||||||||||| |||||||| Sbjct: 11963 ggcgggaagcagctcgggctgtcgccgtcggtgttcgccgccgggtccgtggtggactcc 11904 Query: 947 gggaccatcatcacgcggctgccgcccacggcgtacacggcgctcaagacggcgttcaag 1006 || || |||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 11903 ggcacgatcatcacgcggctgccgccgacggcgtactcggcgctgtcgtcggcgttcaag 11844 Query: 1007 gacggcatgaagcagtacccgacggcgccggccaggagcatcctggacacgtgcttcgac 1066 | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 11843 gccggcatgaagcagtaccggtcggcgccggccaggagcatcctcgacacgtgcttcgac 11784 Query: 1067 ttcagcggccaggacaacgtcaccatacccaccgtcgctttggtgttcgacggcggcaag 1126 ||| ||||||| | | || ||||||| |||||||| |||||||| ||||||| Sbjct: 11783 ttcgccggccagacccagatctccataccgaccgtcgcgctggtgttctccggcggcgcc 11724 Query: 1127 gtcgtcgacctcgacgccaacgggatcatattcggcagctgcctcgcgttcacggacacc 1186 | | ||||||||||| | ||||||||||| | ||||| ||||||||||||| | | |||| Sbjct: 11723 gccatcgacctcgacccgaacgggatcatgtacggcaactgcctcgcgttcgccgccacc 11664 Query: 1187 ggcgacgacggaagcaccggcatcatcggcaacgtgcagcagaggacccttgaggtgctc 1246 ||||||||||| | ||||||||||||||| |||||||||||| |||| | ||||| || Sbjct: 11663 ggcgacgacgggaccaccggcatcatcgggaacgtgcagcagcggacgttcgaggtcctg 11604 Query: 1247 tacgacgt 1254 |||||||| Sbjct: 11603 tacgacgt 11596 Score = 145 bits (73), Expect = 5e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 606 ccgtcaagggtttccagttcggctgcagccgcgtcgaggaggggttcggcgacaagaccg 665 |||| ||||| ||||||||||| ||||||| ||||||| ||| ||| ||||| |||||| Sbjct: 12244 ccgtgaagggattccagttcgggtgcagccacgtcgagtcgggattcagcgaccagaccg 12185 Query: 666 acgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgt 725 ||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||| ||| Sbjct: 12184 acgggctcatgggcctcggcggcggcgcgcagtcgctcgtgtcgcagacggcggcggcgt 12125 Query: 726 acggcaaggccttctcctactgcctcccg 754 |||| || ||||||| |||||||||||| Sbjct: 12124 acgggaattccttctcgtactgcctcccg 12096 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 12608 gtgccgaccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 12549 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 12548 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 12489 Query: 499 cactgcaac 507 || |||||| Sbjct: 12488 cagtgcaac 12480 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 957 tcacgcggctgccgcccacggcgtacacggcgct 990 |||||||||||||||||||||||||| ||||||| Sbjct: 9219 tcacgcggctgccgcccacggcgtactcggcgct 9252 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 1357 taggctgctctcatgtggttgtcttcttgtttctagttgcgaggtaag 1404 |||| |||||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 11480 taggttgctctcatgtggtcgtctacttgtttgtggttgcgaggtaag 11433 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 191 cgtcgtcgtccagtggagccacggtgccgttgaaccacaggcatggcccgtgctcgccgg 250 ||||||||| |||||| |||||||| ||||||||||| |||| || || |||||||||| Sbjct: 12811 cgtcgtcgttgagtggaaccacggtggcgttgaaccaccggcacgggccatgctcgccgg 12752 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Plus Query: 472 gacaccgggagcgacgtgtcgtggttgcactgcaa 506 |||||||| ||||||||||||||| |||| ||||| Sbjct: 8606 gacaccggcagcgacgtgtcgtgggtgcagtgcaa 8640 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1022 tacccgacggcgccggccaggagcatcctggacacgtgcttcgacttca 1070 |||||| |||||||||| | | | ||||||||||| |||| |||||||| Sbjct: 9290 tacccgtcggcgccggcgacggggatcctggacacctgctacgacttca 9338
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 278 bits (140), Expect = 5e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 887 ggcggggagcagctcagcgtggcgccctccgtcttctccgccgggtccgtgatggactcc 946 |||||| |||||||| | || |||| || || ||| |||||||||||||| |||||||| Sbjct: 68652 ggcgggaagcagctcgggctgtcgccgtcggtgttcgccgccgggtccgtggtggactcc 68593 Query: 947 gggaccatcatcacgcggctgccgcccacggcgtacacggcgctcaagacggcgttcaag 1006 || || |||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 68592 ggcacgatcatcacgcggctgccgccgacggcgtactcggcgctgtcgtcggcgttcaag 68533 Query: 1007 gacggcatgaagcagtacccgacggcgccggccaggagcatcctggacacgtgcttcgac 1066 | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 68532 gccggcatgaagcagtaccggtcggcgccggccaggagcatcctcgacacgtgcttcgac 68473 Query: 1067 ttcagcggccaggacaacgtcaccatacccaccgtcgctttggtgttcgacggcggcaag 1126 ||| ||||||| | | || ||||||| |||||||| |||||||| ||||||| Sbjct: 68472 ttcgccggccagacccagatctccataccgaccgtcgcgctggtgttctccggcggcgcc 68413 Query: 1127 gtcgtcgacctcgacgccaacgggatcatattcggcagctgcctcgcgttcacggacacc 1186 | | ||||||||||| | ||||||||||| | ||||| ||||||||||||| | | |||| Sbjct: 68412 gccatcgacctcgacccgaacgggatcatgtacggcaactgcctcgcgttcgccgccacc 68353 Query: 1187 ggcgacgacggaagcaccggcatcatcggcaacgtgcagcagaggacccttgaggtgctc 1246 ||||||||||| | ||||||||||||||| |||||||||||| |||| | ||||| || Sbjct: 68352 ggcgacgacgggaccaccggcatcatcgggaacgtgcagcagcggacgttcgaggtcctg 68293 Query: 1247 tacgacgt 1254 |||||||| Sbjct: 68292 tacgacgt 68285 Score = 145 bits (73), Expect = 5e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 606 ccgtcaagggtttccagttcggctgcagccgcgtcgaggaggggttcggcgacaagaccg 665 |||| ||||| ||||||||||| ||||||| ||||||| ||| ||| ||||| |||||| Sbjct: 68933 ccgtgaagggattccagttcgggtgcagccacgtcgagtcgggattcagcgaccagaccg 68874 Query: 666 acgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgt 725 ||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||| ||| Sbjct: 68873 acgggctcatgggcctcggcggcggcgcgcagtcgctcgtgtcgcagacggcggcggcgt 68814 Query: 726 acggcaaggccttctcctactgcctcccg 754 |||| || ||||||| |||||||||||| Sbjct: 68813 acgggaattccttctcgtactgcctcccg 68785 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 69297 gtgccgaccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 69238 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 69237 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 69178 Query: 499 cactgcaac 507 || |||||| Sbjct: 69177 cagtgcaac 69169 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 957 tcacgcggctgccgcccacggcgtacacggcgct 990 |||||||||||||||||||||||||| ||||||| Sbjct: 65908 tcacgcggctgccgcccacggcgtactcggcgct 65941 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 1357 taggctgctctcatgtggttgtcttcttgtttctagttgcgaggtaag 1404 |||| |||||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 68169 taggttgctctcatgtggtcgtctacttgtttgtggttgcgaggtaag 68122 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 191 cgtcgtcgtccagtggagccacggtgccgttgaaccacaggcatggcccgtgctcgccgg 250 ||||||||| |||||| |||||||| ||||||||||| |||| || || |||||||||| Sbjct: 69500 cgtcgtcgttgagtggaaccacggtggcgttgaaccaccggcacgggccatgctcgccgg 69441 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Plus Query: 472 gacaccgggagcgacgtgtcgtggttgcactgcaa 506 |||||||| ||||||||||||||| |||| ||||| Sbjct: 65295 gacaccggcagcgacgtgtcgtgggtgcagtgcaa 65329 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1022 tacccgacggcgccggccaggagcatcctggacacgtgcttcgacttca 1070 |||||| |||||||||| | | | ||||||||||| |||| |||||||| Sbjct: 65979 tacccgtcggcgccggcgacggggatcctggacacctgctacgacttca 66027
>dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G11, full insert sequence Length = 1716 Score = 278 bits (140), Expect = 5e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 887 ggcggggagcagctcagcgtggcgccctccgtcttctccgccgggtccgtgatggactcc 946 |||||| |||||||| | || |||| || || ||| |||||||||||||| |||||||| Sbjct: 1025 ggcgggaagcagctcgggctgtcgccgtcggtgttcgccgccgggtccgtggtggactcc 1084 Query: 947 gggaccatcatcacgcggctgccgcccacggcgtacacggcgctcaagacggcgttcaag 1006 || || |||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 1085 ggcacgatcatcacgcggctgccgccgacggcgtactcggcgctgtcgtcggcgttcaag 1144 Query: 1007 gacggcatgaagcagtacccgacggcgccggccaggagcatcctggacacgtgcttcgac 1066 | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 1145 gccggcatgaagcagtaccggtcggcgccggccaggagcatcctcgacacgtgcttcgac 1204 Query: 1067 ttcagcggccaggacaacgtcaccatacccaccgtcgctttggtgttcgacggcggcaag 1126 ||| ||||||| | | || ||||||| |||||||| |||||||| ||||||| Sbjct: 1205 ttcgccggccagacccagatctccataccgaccgtcgcgctggtgttctccggcggcgcc 1264 Query: 1127 gtcgtcgacctcgacgccaacgggatcatattcggcagctgcctcgcgttcacggacacc 1186 | | ||||||||||| | ||||||||||| | ||||| ||||||||||||| | | |||| Sbjct: 1265 gccatcgacctcgacccgaacgggatcatgtacggcaactgcctcgcgttcgccgccacc 1324 Query: 1187 ggcgacgacggaagcaccggcatcatcggcaacgtgcagcagaggacccttgaggtgctc 1246 ||||||||||| | ||||||||||||||| |||||||||||| |||| | ||||| || Sbjct: 1325 ggcgacgacgggaccaccggcatcatcgggaacgtgcagcagcggacgttcgaggtcctg 1384 Query: 1247 tacgacgt 1254 |||||||| Sbjct: 1385 tacgacgt 1392 Score = 145 bits (73), Expect = 5e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 606 ccgtcaagggtttccagttcggctgcagccgcgtcgaggaggggttcggcgacaagaccg 665 |||| ||||| ||||||||||| ||||||| ||||||| ||| ||| ||||| |||||| Sbjct: 744 ccgtgaagggattccagttcgggtgcagccacgtcgagtcgggattcagcgaccagaccg 803 Query: 666 acgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgt 725 ||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||| ||| Sbjct: 804 acgggctcatgggcctcggcggcggcgcgcagtcgctcgtgtcgcagacggcggcggcgt 863 Query: 726 acggcaaggccttctcctactgcctcccg 754 |||| || ||||||| |||||||||||| Sbjct: 864 acgggaattccttctcgtactgcctcccg 892 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 380 gtgccgaccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 439 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 440 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 499 Query: 499 cactgcaac 507 || |||||| Sbjct: 500 cagtgcaac 508 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 163 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 222 |||||||||||||||| || | ||| ||||||||| |||||| |||||||| ||||| Sbjct: 149 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 208 Query: 223 aaccacaggcatggcccgtgctcgccgg 250 |||||| |||| || || |||||||||| Sbjct: 209 aaccaccggcacgggccatgctcgccgg 236 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1357 taggctgctctcatgtggttgtcttcttgtttctagttgcgaggtaag 1404 |||| |||||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 1508 taggttgctctcatgtggtcgtctacttgtttgtggttgcgaggtaag 1555
>dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076I21, full insert sequence Length = 1736 Score = 278 bits (140), Expect = 5e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 887 ggcggggagcagctcagcgtggcgccctccgtcttctccgccgggtccgtgatggactcc 946 |||||| |||||||| | || |||| || || ||| |||||||||||||| |||||||| Sbjct: 1030 ggcgggaagcagctcgggctgtcgccgtcggtgttcgccgccgggtccgtggtggactcc 1089 Query: 947 gggaccatcatcacgcggctgccgcccacggcgtacacggcgctcaagacggcgttcaag 1006 || || |||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 1090 ggcacgatcatcacgcggctgccgccgacggcgtactcggcgctgtcgtcggcgttcaag 1149 Query: 1007 gacggcatgaagcagtacccgacggcgccggccaggagcatcctggacacgtgcttcgac 1066 | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 1150 gccggcatgaagcagtaccggtcggcgccggccaggagcatcctcgacacgtgcttcgac 1209 Query: 1067 ttcagcggccaggacaacgtcaccatacccaccgtcgctttggtgttcgacggcggcaag 1126 ||| ||||||| | | || ||||||| |||||||| |||||||| ||||||| Sbjct: 1210 ttcgccggccagacccagatctccataccgaccgtcgcgctggtgttctccggcggcgcc 1269 Query: 1127 gtcgtcgacctcgacgccaacgggatcatattcggcagctgcctcgcgttcacggacacc 1186 | | ||||||||||| | ||||||||||| | ||||| ||||||||||||| | | |||| Sbjct: 1270 gccatcgacctcgacccgaacgggatcatgtacggcaactgcctcgcgttcgccgccacc 1329 Query: 1187 ggcgacgacggaagcaccggcatcatcggcaacgtgcagcagaggacccttgaggtgctc 1246 ||||||||||| | ||||||||||||||| |||||||||||| |||| | ||||| || Sbjct: 1330 ggcgacgacgggaccaccggcatcatcgggaacgtgcagcagcggacgttcgaggtcctg 1389 Query: 1247 tacgacgt 1254 |||||||| Sbjct: 1390 tacgacgt 1397 Score = 145 bits (73), Expect = 5e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 606 ccgtcaagggtttccagttcggctgcagccgcgtcgaggaggggttcggcgacaagaccg 665 |||| ||||| ||||||||||| ||||||| ||||||| ||| ||| ||||| |||||| Sbjct: 749 ccgtgaagggattccagttcgggtgcagccacgtcgagtcgggattcagcgaccagaccg 808 Query: 666 acgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgt 725 ||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||| ||| Sbjct: 809 acgggctcatgggcctcggcggcggcgcgcagtcgctcgtgtcgcagacggcggcggcgt 868 Query: 726 acggcaaggccttctcctactgcctcccg 754 |||| || ||||||| |||||||||||| Sbjct: 869 acgggaattccttctcgtactgcctcccg 897 Score = 97.6 bits (49), Expect = 1e-16 Identities = 109/129 (84%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 |||||| || ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 385 gtgccgcccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 444 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 445 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 504 Query: 499 cactgcaac 507 || |||||| Sbjct: 505 cagtgcaac 513 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 163 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 222 |||||||||||||||| || | ||| ||||||||| |||||| |||||||| ||||| Sbjct: 154 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 213 Query: 223 aaccacaggcatggcccgtgctcgccgg 250 |||||| |||| || || |||||||||| Sbjct: 214 aaccaccggcacgggccatgctcgccgg 241 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1357 taggctgctctcatgtggttgtcttcttgtttctagttgcgaggtaag 1404 |||| |||||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 1513 taggttgctctcatgtggtcgtctacttgtttgtggttgcgaggtaag 1560
>ref|NM_001050071.1| Oryza sativa (japonica cultivar-group) Os01g0608300 (Os01g0608300) mRNA, complete cds Length = 1479 Score = 115 bits (58), Expect = 5e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 655 cgacaagaccgacgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagac 714 ||||||||||||||| ||||| || |||||||||||||||| ||||| || |||||||| Sbjct: 825 cgacaagaccgacggcctcatcggcctcggcggcgacgcgcagtcgccggtgtcgcagac 884 Query: 715 cgcggcgacgtacggcaaggccttctcctactgcctcccggc 756 ||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 885 ggcggcgaggtacggcaagtccttcttctactgcctcccggc 926 Score = 113 bits (57), Expect = 2e-21 Identities = 243/305 (79%) Strand = Plus / Plus Query: 924 ccgccgggtccgtgatggactccgggaccatcatcacgcggctgccgcccacggcgtaca 983 |||||||||| || |||||||||| || | ||||||||||||||||| |||||||| Sbjct: 1109 ccgccgggtcgctggtggactccggcacggtgatcacgcggctgccgccggcggcgtacg 1168 Query: 984 cggcgctcaagacggcgttcaaggacggcatgaagcagtacccgacggcgccggccagga 1043 ||||||| | |||||||| | ||| |||| || |||| ||| |||| | || | Sbjct: 1169 cggcgctgtcgtcggcgttccgagccgggatgacgcggtacgcgagggcggagcccctgg 1228 Query: 1044 gcatcctggacacgtgcttcgacttcagcggccaggacaacgtcaccatacccaccgtcg 1103 |||| || |||||||||||| |||||| ||||| |||||| |||| |||||| ||||||| Sbjct: 1229 gcattctcgacacgtgcttcaacttcaccggcctggacaaggtcagcataccgaccgtcg 1288 Query: 1104 ctttggtgttcgacggcggcaaggtcgtcgacctcgacgccaacgggatcatattcggca 1163 | ||||||||| ||||||| ||||||||||||||||| |||| ||| | | |||| Sbjct: 1289 cgctggtgttcgccggcggcgccgtcgtcgacctcgacgcgcacggcatcgtgtccggcg 1348 Query: 1164 gctgcctcgcgttcacggacaccggcgacgacggaagcaccggcatcatcggcaacgtgc 1223 |||||||||||||| || |||| |||||||| | ||||| |||||||||||||| Sbjct: 1349 gctgcctcgcgttcgcgcccacccgcgacgacaaggccttcggcaccatcggcaacgtgc 1408 Query: 1224 agcag 1228 ||||| Sbjct: 1409 agcag 1413 Score = 91.7 bits (46), Expect = 7e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| |||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 403 gtgccgaccacgctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 462 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||||||||||||||| ||||| || |||||||||||| ||||||||||||||| || Sbjct: 463 ggctcgccggcggtgacgcagagggtggtcatcgacaccggcagcgacgtgtcgtgggtg 522 Query: 499 ca 500 || Sbjct: 523 ca 524 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 276 cgaggagcggctccgccgtgacacgctccgagccggctacgtccagcggaagttctcc 333 |||||||| ||||||||||||| ||||||||| | |||| ||| || ||||||||| Sbjct: 294 cgaggagctgctccgccgtgaccagctccgagctgactacatccgacgcaagttctcc 351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 115 bits (58), Expect = 5e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 655 cgacaagaccgacgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagac 714 ||||||||||||||| ||||| || |||||||||||||||| ||||| || |||||||| Sbjct: 24015398 cgacaagaccgacggcctcatcggcctcggcggcgacgcgcagtcgccggtgtcgcagac 24015457 Query: 715 cgcggcgacgtacggcaaggccttctcctactgcctcccggc 756 ||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 24015458 ggcggcgaggtacggcaagtccttcttctactgcctcccggc 24015499 Score = 113 bits (57), Expect = 2e-21 Identities = 243/305 (79%) Strand = Plus / Plus Query: 924 ccgccgggtccgtgatggactccgggaccatcatcacgcggctgccgcccacggcgtaca 983 |||||||||| || |||||||||| || | ||||||||||||||||| |||||||| Sbjct: 24015682 ccgccgggtcgctggtggactccggcacggtgatcacgcggctgccgccggcggcgtacg 24015741 Query: 984 cggcgctcaagacggcgttcaaggacggcatgaagcagtacccgacggcgccggccagga 1043 ||||||| | |||||||| | ||| |||| || |||| ||| |||| | || | Sbjct: 24015742 cggcgctgtcgtcggcgttccgagccgggatgacgcggtacgcgagggcggagcccctgg 24015801 Query: 1044 gcatcctggacacgtgcttcgacttcagcggccaggacaacgtcaccatacccaccgtcg 1103 |||| || |||||||||||| |||||| ||||| |||||| |||| |||||| ||||||| Sbjct: 24015802 gcattctcgacacgtgcttcaacttcaccggcctggacaaggtcagcataccgaccgtcg 24015861 Query: 1104 ctttggtgttcgacggcggcaaggtcgtcgacctcgacgccaacgggatcatattcggca 1163 | ||||||||| ||||||| ||||||||||||||||| |||| ||| | | |||| Sbjct: 24015862 cgctggtgttcgccggcggcgccgtcgtcgacctcgacgcgcacggcatcgtgtccggcg 24015921 Query: 1164 gctgcctcgcgttcacggacaccggcgacgacggaagcaccggcatcatcggcaacgtgc 1223 |||||||||||||| || |||| |||||||| | ||||| |||||||||||||| Sbjct: 24015922 gctgcctcgcgttcgcgcccacccgcgacgacaaggccttcggcaccatcggcaacgtgc 24015981 Query: 1224 agcag 1228 ||||| Sbjct: 24015982 agcag 24015986 Score = 91.7 bits (46), Expect = 7e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| |||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 24014976 gtgccgaccacgctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 24015035 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||||||||||||||| ||||| || |||||||||||| ||||||||||||||| || Sbjct: 24015036 ggctcgccggcggtgacgcagagggtggtcatcgacaccggcagcgacgtgtcgtgggtg 24015095 Query: 499 ca 500 || Sbjct: 24015096 ca 24015097 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 276 cgaggagcggctccgccgtgacacgctccgagccggctacgtccagcggaagttctcc 333 |||||||| ||||||||||||| ||||||||| | |||| ||| || ||||||||| Sbjct: 24014867 cgaggagctgctccgccgtgaccagctccgagctgactacatccgacgcaagttctcc 24014924
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 115 bits (58), Expect = 5e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 655 cgacaagaccgacgggctcatggggctcggcggcgacgcgccgtcgctcgtctcgcagac 714 ||||||||||||||| ||||| || |||||||||||||||| ||||| || |||||||| Sbjct: 129920 cgacaagaccgacggcctcatcggcctcggcggcgacgcgcagtcgccggtgtcgcagac 129979 Query: 715 cgcggcgacgtacggcaaggccttctcctactgcctcccggc 756 ||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 129980 ggcggcgaggtacggcaagtccttcttctactgcctcccggc 130021 Score = 113 bits (57), Expect = 2e-21 Identities = 243/305 (79%) Strand = Plus / Plus Query: 924 ccgccgggtccgtgatggactccgggaccatcatcacgcggctgccgcccacggcgtaca 983 |||||||||| || |||||||||| || | ||||||||||||||||| |||||||| Sbjct: 130204 ccgccgggtcgctggtggactccggcacggtgatcacgcggctgccgccggcggcgtacg 130263 Query: 984 cggcgctcaagacggcgttcaaggacggcatgaagcagtacccgacggcgccggccagga 1043 ||||||| | |||||||| | ||| |||| || |||| ||| |||| | || | Sbjct: 130264 cggcgctgtcgtcggcgttccgagccgggatgacgcggtacgcgagggcggagcccctgg 130323 Query: 1044 gcatcctggacacgtgcttcgacttcagcggccaggacaacgtcaccatacccaccgtcg 1103 |||| || |||||||||||| |||||| ||||| |||||| |||| |||||| ||||||| Sbjct: 130324 gcattctcgacacgtgcttcaacttcaccggcctggacaaggtcagcataccgaccgtcg 130383 Query: 1104 ctttggtgttcgacggcggcaaggtcgtcgacctcgacgccaacgggatcatattcggca 1163 | ||||||||| ||||||| ||||||||||||||||| |||| ||| | | |||| Sbjct: 130384 cgctggtgttcgccggcggcgccgtcgtcgacctcgacgcgcacggcatcgtgtccggcg 130443 Query: 1164 gctgcctcgcgttcacggacaccggcgacgacggaagcaccggcatcatcggcaacgtgc 1223 |||||||||||||| || |||| |||||||| | ||||| |||||||||||||| Sbjct: 130444 gctgcctcgcgttcgcgcccacccgcgacgacaaggccttcggcaccatcggcaacgtgc 130503 Query: 1224 agcag 1228 ||||| Sbjct: 130504 agcag 130508 Score = 91.7 bits (46), Expect = 7e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| |||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 129498 gtgccgaccacgctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 129557 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||||||||||||||| ||||| || |||||||||||| ||||||||||||||| || Sbjct: 129558 ggctcgccggcggtgacgcagagggtggtcatcgacaccggcagcgacgtgtcgtgggtg 129617 Query: 499 ca 500 || Sbjct: 129618 ca 129619 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 276 cgaggagcggctccgccgtgacacgctccgagccggctacgtccagcggaagttctcc 333 |||||||| ||||||||||||| ||||||||| | |||| ||| || ||||||||| Sbjct: 129389 cgaggagctgctccgccgtgaccagctccgagctgactacatccgacgcaagttctcc 129446
>emb|CT831609.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA009C18, full insert sequence Length = 596 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 379 gtgccgaccgagctgggttctccccaggacacgctggagtacgtcataaccgtcggcgtc 438 ||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||| || Sbjct: 383 gtgccgaccaagctgggctcctccctggacacgctggagtacgtcatctccgtcgggctc 442 Query: 439 ggctcgccggcggtgcagcagatcatgaccatcgacaccgggagcgacgtgtcgtggttg 498 ||| ||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || Sbjct: 443 ggcacgccggccgtgacgcagacggtgaccatcgacaccggcagcgacgtgtcgtgggtg 502 Query: 499 cactgcaac 507 || |||||| Sbjct: 503 cagtgcaac 511 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 163 gccgtctgctccgagcccaaagggatcccgtcgtcgtccagtggagccacggtgccgttg 222 |||||||||||||||| || | ||| ||||||||| |||||| |||||||| ||||| Sbjct: 152 gccgtctgctccgagcgaaatgcgatttcgtcgtcgttgagtggaaccacggtggcgttg 211 Query: 223 aaccacaggcatggcccgtgctcgccgg 250 |||||| |||| || || |||||||||| Sbjct: 212 aaccaccggcacgggccatgctcgccgg 239
>ref|NM_001054488.1| Oryza sativa (japonica cultivar-group) Os02g0720500 (Os02g0720500) mRNA, partial cds Length = 1066 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 957 tcacgcggctgccgcccacggcgtacacggcgct 990 |||||||||||||||||||||||||| ||||||| Sbjct: 182 tcacgcggctgccgcccacggcgtactcggcgct 215 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1022 tacccgacggcgccggccaggagcatcctggacacgtgcttcgacttca 1070 |||||| |||||||||| | | | ||||||||||| |||| |||||||| Sbjct: 253 tacccgtcggcgccggcgacggggatcctggacacctgctacgacttca 301
>dbj|AK108932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A08, full insert sequence Length = 1066 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 957 tcacgcggctgccgcccacggcgtacacggcgct 990 |||||||||||||||||||||||||| ||||||| Sbjct: 182 tcacgcggctgccgcccacggcgtactcggcgct 215 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1022 tacccgacggcgccggccaggagcatcctggacacgtgcttcgacttca 1070 |||||| |||||||||| | | | ||||||||||| |||| |||||||| Sbjct: 253 tacccgtcggcgccggcgacggggatcctggacacctgctacgacttca 301
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 58.0 bits (29), Expect = 9e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 410 cgctggagtacgtcataaccgtcggcgtcggctcgccggcggtgcagcagatcatgacca 469 |||||||||||||| | || ||||| ||||| ||||||| || ||||||| | | || Sbjct: 11426126 cgctggagtacgtcgtcacgctcggcatcggcacgccggccgtccagcagaccgtcctca 11426185 Query: 470 tcgacaccgggagcgacgtgtcgtggttgcactgcaa 506 |||||||||| |||||| |||||||| |||| ||||| Sbjct: 11426186 tcgacaccggcagcgacctgtcgtgggtgcagtgcaa 11426222 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1203 ccggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 ||||| ||||||||||||||||||||| ||| || |||||| | |||||||| Sbjct: 1062982 ccggcttcatcggcaacgtgcagcagaagacgctggaggtggtgtacgacgt 1062931 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 697 gtcgctcgtctcgcagaccgcggcgacgtacggcaaggccttctcctactgcctcccgg 755 ||||||| | |||||||| |||||||||| ||| || || |||||||||||| |||||| Sbjct: 1153520 gtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccgg 1153578 Score = 48.1 bits (24), Expect = 0.091 Identities = 63/76 (82%) Strand = Plus / Minus Query: 679 gctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgtacggcaaggcctt 738 ||||||||||| | ||| |||||| || |||||| ||| || |||||||| || ||| Sbjct: 1063518 gctcggcggcggctcgcagtcgctggtgcagcagacggcgacgcggtacggcagggtctt 1063459 Query: 739 ctcctactgcctcccg 754 |||||||||||||||| Sbjct: 1063458 ctcctactgcctcccg 1063443 Score = 46.1 bits (23), Expect = 0.36 Identities = 65/79 (82%) Strand = Plus / Minus Query: 904 cgtggcgccctccgtcttctccgccgggtccgtgatggactccgggaccatcatcacgcg 963 |||| ||||| | |||||||||||| | || ||||| ||||||| ||| ||||| |||| Sbjct: 978057 cgtgccgcccactgtcttctccgccagctctgtgatcgactccgccaccgtcatctcgcg 977998 Query: 964 gctgccgcccacggcgtac 982 | | ||||| ||||||||| Sbjct: 977997 gattccgccgacggcgtac 977979 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 1137493 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 1137543 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 1154039 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 1154089 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 954 tcatcacgcggctgccgcccacggcgtac 982 ||||| ||||||||||||| ||||||||| Sbjct: 1061970 tcatctcgcggctgccgccgacggcgtac 1061942 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 734 gccttctcctactgcctcccg 754 ||||||||||||||||||||| Sbjct: 11330735 gccttctcctactgcctcccg 11330715 Score = 42.1 bits (21), Expect = 5.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 406 gacacgctggagtacgtcataaccgtcggcgtcggctcgccggcg 450 ||||||||||||| |||| | |||||||| ||||| |||||||| Sbjct: 11398616 gacacgctggagttcgtcgtcgccgtcggcctcggcacgccggcg 11398660
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 58.0 bits (29), Expect = 9e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 410 cgctggagtacgtcataaccgtcggcgtcggctcgccggcggtgcagcagatcatgacca 469 |||||||||||||| | || ||||| ||||| ||||||| || ||||||| | | || Sbjct: 113835 cgctggagtacgtcgtcacgctcggcatcggcacgccggccgtccagcagaccgtcctca 113894 Query: 470 tcgacaccgggagcgacgtgtcgtggttgcactgcaa 506 |||||||||| |||||| |||||||| |||| ||||| Sbjct: 113895 tcgacaccggcagcgacctgtcgtgggtgcagtgcaa 113931 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 734 gccttctcctactgcctcccg 754 ||||||||||||||||||||| Sbjct: 18444 gccttctcctactgcctcccg 18424 Score = 42.1 bits (21), Expect = 5.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 406 gacacgctggagtacgtcataaccgtcggcgtcggctcgccggcg 450 ||||||||||||| |||| | |||||||| ||||| |||||||| Sbjct: 86325 gacacgctggagttcgtcgtcgccgtcggcctcggcacgccggcg 86369
>ref|NM_001063168.1| Oryza sativa (japonica cultivar-group) Os06g0119600 (Os06g0119600) mRNA, complete cds Length = 1898 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1203 ccggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 ||||| ||||||||||||||||||||| ||| || |||||| | |||||||| Sbjct: 1459 ccggcttcatcggcaacgtgcagcagaagacgctggaggtggtgtacgacgt 1510 Score = 48.1 bits (24), Expect = 0.091 Identities = 63/76 (82%) Strand = Plus / Plus Query: 679 gctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgtacggcaaggcctt 738 ||||||||||| | ||| |||||| || |||||| ||| || |||||||| || ||| Sbjct: 923 gctcggcggcggctcgcagtcgctggtgcagcagacggcgacgcggtacggcagggtctt 982 Query: 739 ctcctactgcctcccg 754 |||||||||||||||| Sbjct: 983 ctcctactgcctcccg 998
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1203 ccggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 ||||| ||||||||||||||||||||| ||| || |||||| | |||||||| Sbjct: 125855 ccggcttcatcggcaacgtgcagcagaagacgctggaggtggtgtacgacgt 125804 Score = 48.1 bits (24), Expect = 0.091 Identities = 63/76 (82%) Strand = Plus / Minus Query: 679 gctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgtacggcaaggcctt 738 ||||||||||| | ||| |||||| || |||||| ||| || |||||||| || ||| Sbjct: 126391 gctcggcggcggctcgcagtcgctggtgcagcagacggcgacgcggtacggcagggtctt 126332 Query: 739 ctcctactgcctcccg 754 |||||||||||||||| Sbjct: 126331 ctcctactgcctcccg 126316 Score = 46.1 bits (23), Expect = 0.36 Identities = 65/79 (82%) Strand = Plus / Minus Query: 904 cgtggcgccctccgtcttctccgccgggtccgtgatggactccgggaccatcatcacgcg 963 |||| ||||| | |||||||||||| | || ||||| ||||||| ||| ||||| |||| Sbjct: 40930 cgtgccgcccactgtcttctccgccagctctgtgatcgactccgccaccgtcatctcgcg 40871 Query: 964 gctgccgcccacggcgtac 982 | | ||||| ||||||||| Sbjct: 40870 gattccgccgacggcgtac 40852 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 954 tcatcacgcggctgccgcccacggcgtac 982 ||||| ||||||||||||| ||||||||| Sbjct: 124843 tcatctcgcggctgccgccgacggcgtac 124815
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1203 ccggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 ||||| ||||||||||||||||||||| ||| || |||||| | |||||||| Sbjct: 39205 ccggcttcatcggcaacgtgcagcagaagacgctggaggtggtgtacgacgt 39154 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 697 gtcgctcgtctcgcagaccgcggcgacgtacggcaaggccttctcctactgcctcccgg 755 ||||||| | |||||||| |||||||||| ||| || || |||||||||||| |||||| Sbjct: 129743 gtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccgg 129801 Score = 48.1 bits (24), Expect = 0.091 Identities = 63/76 (82%) Strand = Plus / Minus Query: 679 gctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgtacggcaaggcctt 738 ||||||||||| | ||| |||||| || |||||| ||| || |||||||| || ||| Sbjct: 39741 gctcggcggcggctcgcagtcgctggtgcagcagacggcgacgcggtacggcagggtctt 39682 Query: 739 ctcctactgcctcccg 754 |||||||||||||||| Sbjct: 39681 ctcctactgcctcccg 39666 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 113716 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 113766 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 130262 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 130312 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 954 tcatcacgcggctgccgcccacggcgtac 982 ||||| ||||||||||||| ||||||||| Sbjct: 38193 tcatctcgcggctgccgccgacggcgtac 38165
>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full insert sequence Length = 1886 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1203 ccggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 ||||| ||||||||||||||||||||| ||| || |||||| | |||||||| Sbjct: 1468 ccggcttcatcggcaacgtgcagcagaagacgctggaggtggtgtacgacgt 1519 Score = 48.1 bits (24), Expect = 0.091 Identities = 63/76 (82%) Strand = Plus / Plus Query: 679 gctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgtacggcaaggcctt 738 ||||||||||| | ||| |||||| || |||||| ||| || |||||||| || ||| Sbjct: 932 gctcggcggcggctcgcagtcgctggtgcagcagacggcgacgcggtacggcagggtctt 991 Query: 739 ctcctactgcctcccg 754 |||||||||||||||| Sbjct: 992 ctcctactgcctcccg 1007
>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full insert sequence Length = 1900 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1203 ccggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 ||||| ||||||||||||||||||||| ||| || |||||| | |||||||| Sbjct: 1460 ccggcttcatcggcaacgtgcagcagaagacgctggaggtggtgtacgacgt 1511 Score = 48.1 bits (24), Expect = 0.091 Identities = 63/76 (82%) Strand = Plus / Plus Query: 679 gctcggcggcgacgcgccgtcgctcgtctcgcagaccgcggcgacgtacggcaaggcctt 738 ||||||||||| | ||| |||||| || |||||| ||| || |||||||| || ||| Sbjct: 924 gctcggcggcggctcgcagtcgctggtgcagcagacggcgacgcggtacggcagggtctt 983 Query: 739 ctcctactgcctcccg 754 |||||||||||||||| Sbjct: 984 ctcctactgcctcccg 999
>dbj|AK242323.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075197H21, full insert sequence Length = 1389 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 697 gtcgctcgtctcgcagaccgcggcgacgtacggcaaggccttctcctactgcctcccgg 755 ||||||| | |||||||| |||||||||| ||| || || |||||||||||| |||||| Sbjct: 621 gtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccgg 563 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Minus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 102 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 52
>ref|NM_001063174.1| Oryza sativa (japonica cultivar-group) Os06g0121800 (Os06g0121800) mRNA, complete cds Length = 1518 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 697 gtcgctcgtctcgcagaccgcggcgacgtacggcaaggccttctcctactgcctcccgg 755 ||||||| | |||||||| |||||||||| ||| || || |||||||||||| |||||| Sbjct: 909 gtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccgg 967 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 1428 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 1478
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 697 gtcgctcgtctcgcagaccgcggcgacgtacggcaaggccttctcctactgcctcccgg 755 ||||||| | |||||||| |||||||||| ||| || || |||||||||||| |||||| Sbjct: 5473 gtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccgg 5531 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 5992 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 6042
>ref|NM_001063173.1| Oryza sativa (japonica cultivar-group) Os06g0121500 (Os06g0121500) mRNA, complete cds Length = 1389 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 1252 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 1302
>ref|NM_001063162.1| Oryza sativa (japonica cultivar-group) Os06g0118000 (Os06g0118000) mRNA, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.36 Identities = 65/79 (82%) Strand = Plus / Plus Query: 904 cgtggcgccctccgtcttctccgccgggtccgtgatggactccgggaccatcatcacgcg 963 |||| ||||| | |||||||||||| | || ||||| ||||||| ||| ||||| |||| Sbjct: 392 cgtgccgcccactgtcttctccgccagctctgtgatcgactccgccaccgtcatctcgcg 451 Query: 964 gctgccgcccacggcgtac 982 | | ||||| ||||||||| Sbjct: 452 gattccgccgacggcgtac 470
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.36 Identities = 29/31 (93%) Strand = Plus / Minus Query: 429 cgtcggcgtcggctcgccggcggtgcagcag 459 |||||||||||||| ||||||| |||||||| Sbjct: 5124998 cgtcggcgtcggcttgccggcgctgcagcag 5124968
>dbj|AK061513.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H02, full insert sequence Length = 1132 Score = 46.1 bits (23), Expect = 0.36 Identities = 65/79 (82%) Strand = Plus / Plus Query: 904 cgtggcgccctccgtcttctccgccgggtccgtgatggactccgggaccatcatcacgcg 963 |||| ||||| | |||||||||||| | || ||||| ||||||| ||| ||||| |||| Sbjct: 392 cgtgccgcccactgtcttctccgccagctctgtgatcgactccgccaccgtcatctcgcg 451 Query: 964 gctgccgcccacggcgtac 982 | | ||||| ||||||||| Sbjct: 452 gattccgccgacggcgtac 470
>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full insert sequence Length = 1389 Score = 46.1 bits (23), Expect = 0.36 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1204 cggcatcatcggcaacgtgcagcagaggacccttgaggtgctctacgacgt 1254 |||| ||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 1252 cggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgt 1302
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 781 gacgctcggcgcggagaccagc 802 |||||||||||||||||||||| Sbjct: 5365104 gacgctcggcgcggagaccagc 5365083
>ref|XM_749710.1| Aspergillus fumigatus Af293 cell wall protein (Afu3g08110) partial mRNA Length = 1848 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1187 ggcgacgacggaagcaccggca 1208 |||||||||||||||||||||| Sbjct: 834 ggcgacgacggaagcaccggca 813
>gb|AC025437.6| Homo sapiens chromosome 5 clone CTC-436K13, complete sequence Length = 171125 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 tgctcagaagccaacagtcccc 849 |||||||||||||||||||||| Sbjct: 879 tgctcagaagccaacagtcccc 858
>gb|AC091975.3| Homo sapiens chromosome 5 clone RP11-524N5, complete sequence Length = 133791 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 828 tgctcagaagccaacagtcccc 849 |||||||||||||||||||||| Sbjct: 14069 tgctcagaagccaacagtcccc 14090
>ref|NM_153550.3| Mus musculus disrupted in renal carcinoma 2 (human) (Dirc2), mRNA Length = 4554 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 gcggctgccgctcctcctcct 74 ||||||||||||||||||||| Sbjct: 158 gcggctgccgctcctcctcct 138
>gb|AY009799.1| Caribaeohypnum polypterum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 25S ribosomal RNA gene, partial sequence Length = 823 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 633 gccgcgtcgaggaggggttcggcga 657 ||||||||| ||||||||||||||| Sbjct: 262 gccgcgtcgcggaggggttcggcga 286
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1119 gcggcaaggtcgtcgacctcgacgc 1143 ||||| ||||||||||||||||||| Sbjct: 473460 gcggcgaggtcgtcgacctcgacgc 473436
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1116 acggcggcaaggtcgtcgacc 1136 ||||||||||||||||||||| Sbjct: 1854303 acggcggcaaggtcgtcgacc 1854323
>gb|BC037460.1| Mus musculus disrupted in renal carcinoma 2 (human), mRNA (cDNA clone MGC:47126 IMAGE:4190539), complete cds Length = 2073 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 gcggctgccgctcctcctcct 74 ||||||||||||||||||||| Sbjct: 132 gcggctgccgctcctcctcct 112
>gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, complete sequence Length = 214649 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 gcggctgccgctcctcctcct 74 ||||||||||||||||||||| Sbjct: 161031 gcggctgccgctcctcctcct 161011
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1126 ggtcgtcgacctcgacgccaacggg 1150 |||||||||| |||||||||||||| Sbjct: 4424814 ggtcgtcgacatcgacgccaacggg 4424790
>dbj|AK172331.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830201N18 product:disrupted in renal carcinoma 2 (human), full insert sequence Length = 2090 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 gcggctgccgctcctcctcct 74 ||||||||||||||||||||| Sbjct: 173 gcggctgccgctcctcctcct 153
>dbj|AK034214.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330164E21 product:hypothetical Trypsin-like serine proteases structure containing protein, full insert sequence Length = 4555 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 gcggctgccgctcctcctcct 74 ||||||||||||||||||||| Sbjct: 158 gcggctgccgctcctcctcct 138
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 tctcgcggctgccgctcctcctcct 74 ||||||||| ||||||||||||||| Sbjct: 4412 tctcgcggccgccgctcctcctcct 4436 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 tctcgcggctgccgctcctcctcct 74 ||||||||| ||||||||||||||| Sbjct: 122605 tctcgcggccgccgctcctcctcct 122581
>dbj|AK102614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099D18, full insert sequence Length = 1868 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 734 gccttctcctactgcctcccg 754 ||||||||||||||||||||| Sbjct: 894 gccttctcctactgcctcccg 914
>emb|CR378099.1| Pinus pinaster SSR, clone PPB2F11 Length = 647 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gggagagtgagcaaggaggag 34 ||||||||||||||||||||| Sbjct: 80 gggagagtgagcaaggaggag 100
>emb|CR378086.1| Pinus pinaster SSR, clone PPB2D04 Length = 654 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gggagagtgagcaaggaggag 34 ||||||||||||||||||||| Sbjct: 91 gggagagtgagcaaggaggag 111
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1345 agggtggctagctaggctgct 1365 ||||||||||||||||||||| Sbjct: 84443 agggtggctagctaggctgct 84463 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 189,245,903 Number of extensions: 10598024 Number of successful extensions: 210655 Number of sequences better than 10.0: 45 Number of HSP's gapped: 210640 Number of HSP's successfully gapped: 128 Length of query: 1480 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1457 Effective length of database: 18,503,978,556 Effective search space: 26960296756092 Effective search space used: 26960296756092 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
