ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94k15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ244511.1| Zea mays clone 8695 mRNA sequence Length = 779 Score = 430 bits (217), Expect = e-117 Identities = 340/381 (89%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 165 ccggttcttggtgagccgatggacttgatgactgctctacagcttgtcatgaagaagtca 224 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||||||||| ||||| |||||||| ||||| || | |||| ||||||| Sbjct: 225 agtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcat 284 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | |||||||| ||||||||||| |||||||||||||| |||||||| || Sbjct: 285 gctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagctcgtt 344 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 |||||||| || ||||||||||| |||||| |||| || ||||| ||||| ||||||||| Sbjct: 345 aaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactctt 404 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 || |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 405 ggagagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 464 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || || ||||| ||||||||||||||||| || ||||| ||| ||||||||||| Sbjct: 465 tgctcttgcgttgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgcag 524 Query: 572 gaatacgtcaagtcgcactag 592 || ||||||||||| |||||| Sbjct: 525 gagtacgtcaagtctcactag 545
>ref|NM_001065434.1| Oryza sativa (japonica cultivar-group) Os07g0150200 (Os07g0150200) mRNA, complete cds Length = 733 Score = 430 bits (217), Expect = e-117 Identities = 340/381 (89%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 195 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 196 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 255 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 256 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 315 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 316 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 375 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 376 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 435 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 436 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 495 Query: 572 gaatacgtcaagtcgcactag 592 || || ||||| ||||||||| Sbjct: 496 gactatgtcaaatcgcactag 516
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 430 bits (217), Expect = e-117 Identities = 340/381 (89%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 196 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 197 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 256 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 257 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 316 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 317 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 376 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 377 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 436 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 437 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 496 Query: 572 gaatacgtcaagtcgcactag 592 || || ||||| ||||||||| Sbjct: 497 gactatgtcaaatcgcactag 517
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 430 bits (217), Expect = e-117 Identities = 340/381 (89%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 192 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 193 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 252 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 253 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 312 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 313 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 372 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 373 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 432 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 433 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 492 Query: 572 gaatacgtcaagtcgcactag 592 || || ||||| ||||||||| Sbjct: 493 gactatgtcaaatcgcactag 513
>emb|CT833894.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I24, full insert sequence Length = 724 Score = 422 bits (213), Expect = e-115 Identities = 339/381 (88%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 149 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 208 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 209 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 268 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 269 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 328 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || |||||||||||||| |||||| | || |||||||||||||| || |||||| Sbjct: 329 aaggctctgtgtgctgagcacaatgttcaccttgttaccgtgcctagtgctaagactctt 388 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 389 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 448 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 449 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 508 Query: 572 gaatacgtcaagtcgcactag 592 || || ||||| ||||||||| Sbjct: 509 gactatgtcaaatcgcactag 529
>emb|CT833893.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I23, full insert sequence Length = 724 Score = 422 bits (213), Expect = e-115 Identities = 339/381 (88%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 149 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 208 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 209 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 268 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 269 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 328 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || |||||||||||||| |||||| | || |||||||||||||| || |||||| Sbjct: 329 aaggctctgtgtgctgagcacaatgttcaccttgttaccgtgcctagtgctaagactctt 388 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 389 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 448 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 449 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 508 Query: 572 gaatacgtcaagtcgcactag 592 || || ||||| ||||||||| Sbjct: 509 gactatgtcaaatcgcactag 529
>gb|DQ244770.1| Zea mays clone 10578 mRNA sequence Length = 736 Score = 369 bits (186), Expect = 1e-98 Identities = 330/378 (87%) Strand = Plus / Plus Query: 215 gttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagt 274 |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 154 gttcttggagagccaatggacttgatgactgcgctgcagctggtgatgaagaagtcaagt 213 Query: 275 gctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcatgct 334 ||||||||||| ||||| ||||| || || || ||||| || || |||| |||||||||| Sbjct: 214 gctcatgatggacttgtgaagggtcttcgcgaggctgccaaggccattgagaagcatgct 273 Query: 335 gctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaag 394 |||||| | || || ||||||||||| || |||||||| |||||||| ||||| || ||| Sbjct: 274 gctcagctttgcgttcttgctgaggactgtgaccagccagattatgtcaagctggtgaag 333 Query: 395 gcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggc 454 || ||||||||||| ||||| |||||| | ||||| || ||| ||| || ||||||||| Sbjct: 334 gcgctctgtgctgaacacaatgttcaccttgtcactgttcctgctgctaagactcttggc 393 Query: 455 gagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgc 514 ||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 394 gagtgggctgggctttgcaagattgactccgagggcaaggcaaggaaggttgtaggctgc 453 Query: 515 tcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaa 574 || ||||||||||| |||||||| |||||||| || ||||| ||| |||| |||||||| Sbjct: 454 tcctgtgtcgttgtcaaggactacggtgaagaatctgagggccttaacatagtgcaggag 513 Query: 575 tacgtcaagtcgcactag 592 || ||||||||||||||| Sbjct: 514 tatgtcaagtcgcactag 531
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 369 bits (186), Expect = 1e-98 Identities = 330/378 (87%) Strand = Plus / Plus Query: 215 gttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagt 274 |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 174 gttcttggagagccaatggacttgatgactgcgctgcagctggtgatgaagaagtcaagt 233 Query: 275 gctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcatgct 334 ||||||||||| ||||| ||||| || || || ||||| || || |||| |||||||||| Sbjct: 234 gctcatgatggacttgtgaagggtcttcgcgaggctgccaaggccattgagaagcatgct 293 Query: 335 gctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaag 394 |||||| | || || ||||||||||| || |||||||| |||||||| ||||| || ||| Sbjct: 294 gctcagctttgcgttcttgctgaggactgtgaccagccagattatgtcaagctggtgaag 353 Query: 395 gcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggc 454 || ||||||||||| ||||| |||||| | ||||| || ||| ||| || ||||||||| Sbjct: 354 gcgctctgtgctgaacacaatgttcaccttgtcactgttcctgctgctaagactcttggc 413 Query: 455 gagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgc 514 ||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 414 gagtgggctgggctttgcaagattgactccgagggcaaggcaaggaaggttgtaggctgc 473 Query: 515 tcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaa 574 || ||||||||||| |||||||| |||||||| || ||||| ||| |||| |||||||| Sbjct: 474 tcctgtgtcgttgtcaaggactacggtgaagaatctgagggccttaacatagtgcaggag 533 Query: 575 tacgtcaagtcgcactag 592 || ||||||||||||||| Sbjct: 534 tatgtcaagtcgcactag 551
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 369 bits (186), Expect = 1e-98 Identities = 324/370 (87%) Strand = Plus / Plus Query: 216 ttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtg 275 ||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 154 ttcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagtcaagtg 213 Query: 276 ctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcatgctg 335 |||||||||||||||| ||||| |||||||| ||||| || | |||| ||||||||||| Sbjct: 214 ctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctg 273 Query: 336 ctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaagg 395 ||||| | |||||||| ||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 274 ctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaagg 333 Query: 396 cactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcg 455 |||| || ||||||||||| |||||| |||| || ||||| ||||| |||||||| || | Sbjct: 334 cactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactctcggag 393 Query: 456 agtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgct 515 ||||||| |||||||||||||| ||| |||||||||||||||| ||||| || ||||||| Sbjct: 394 agtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgct 453 Query: 516 catgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaat 575 | || | ||||| ||||||||||||||||| || ||||| ||| ||||||||||| | | Sbjct: 454 cttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagt 513 Query: 576 acgtcaagtc 585 | |||||||| Sbjct: 514 atgtcaagtc 523
>ref|NM_001065764.1| Oryza sativa (japonica cultivar-group) Os07g0229900 (Os07g0229900) mRNA, complete cds Length = 753 Score = 367 bits (185), Expect = 4e-98 Identities = 332/381 (87%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 152 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 211 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 || ||||||||||| || || ||||| |||||||| || || || || |||| ||||||| Sbjct: 212 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 271 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 272 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 331 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 332 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 391 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 392 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 451 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 452 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 511 Query: 572 gaatacgtcaagtcgcactag 592 || || |||||||| |||||| Sbjct: 512 gactatgtcaagtcccactag 532
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 367 bits (185), Expect = 4e-98 Identities = 332/381 (87%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 153 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 212 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 || ||||||||||| || || ||||| |||||||| || || || || |||| ||||||| Sbjct: 213 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 272 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 273 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 332 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 333 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 392 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 393 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 452 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 453 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 512 Query: 572 gaatacgtcaagtcgcactag 592 || || |||||||| |||||| Sbjct: 513 gactatgtcaagtcccactag 533
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 367 bits (185), Expect = 4e-98 Identities = 332/381 (87%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 156 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 215 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 || ||||||||||| || || ||||| |||||||| || || || || |||| ||||||| Sbjct: 216 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 275 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 276 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 335 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 336 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 395 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 396 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 455 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 456 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 515 Query: 572 gaatacgtcaagtcgcactag 592 || || |||||||| |||||| Sbjct: 516 gactatgtcaagtcccactag 536
>emb|CT833874.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA017I05, full insert sequence Length = 732 Score = 353 bits (178), Expect = 6e-94 Identities = 328/378 (86%) Strand = Plus / Plus Query: 215 gttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagt 274 |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 155 gttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtcaagc 214 Query: 275 gctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcatgct 334 ||||||||||| || || ||||| |||||||| || || || || |||| ||||||||| Sbjct: 215 gctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcatgcc 274 Query: 335 gctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaag 394 |||||| | || |||||||||||||| || ||||||||||||||||| ||| | |||||| Sbjct: 275 gctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtcaag 334 Query: 395 gcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggc 454 |||||||| |||||||||| |||||| | || |||||||||||||| |||||||||||| Sbjct: 335 gcactctgcgctgagcacagtgttcacctcgttaccgtgcctagtgctaaaactcttggc 394 Query: 455 gagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgc 514 |||||||| ||||||||||||||||| |||||||||||||| || ||||| || |||||| Sbjct: 395 gagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgc 454 Query: 515 tcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaa 574 || || |||||||| ||||||| |||||||| || ||||| || |||| || ||||| Sbjct: 455 tcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccaggac 514 Query: 575 tacgtcaagtcgcactag 592 || |||||||| |||||| Sbjct: 515 tatgtcaagtcccactag 532
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 353 bits (178), Expect = 6e-94 Identities = 343/398 (86%) Strand = Plus / Plus Query: 195 cagttgcggccccaattccggttcttggagagcccatggacttgatgactgctctgcagc 254 |||||| |||||| | ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 104 cagttgaggcccctaccccggtccttggggagccgatggacttgatgactgctctgcagc 163 Query: 255 ttgtgatgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaa 314 |||| ||||||||||| ||||||||||||||||||| ||||| || ||||| ||||| | Sbjct: 164 ttgtcatgaagaagtcgggtgctcatgatggccttgttaagggtcttcgtgaggctgcca 223 Query: 315 aagcgattgggaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctg 374 |||| |||| |||||||||||||||| | || |||||||| ||||| || |||||||||| Sbjct: 224 aagcaattgagaagcatgctgctcagctttgcgtgcttgcggaggactgtgaccagcctg 283 Query: 375 attatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgc 434 ||||||| ||||| || ||||| || || ||||||||||||||||| |||| || |||| Sbjct: 284 attatgtcaagctggtgaaggctctttgctctgagcacaacgttcacctggttactgtgc 343 Query: 435 ctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaagg 494 |||| || |||||||||||||| ||| ||||||||||||||||||| ||||||||||||| Sbjct: 344 ctagcgctaaaactcttggcgaatggtctgggctttgcaagattgattctgagggcaagg 403 Query: 495 caagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagg 554 | || ||||| ||||| ||||| ||||| || || ||||||||||| ||||| || |||| Sbjct: 404 cgaggaaggttgtgggttgctcctgtgttgtcgtcaaggactatggcgaagaatctgagg 463 Query: 555 gtcttcacatcgtgcaggaatacgtcaagtcgcactag 592 | ||| |||| || ||||| ||||||||||| |||||| Sbjct: 464 gccttaacatagttcaggagtacgtcaagtcacactag 501
>gb|DQ244291.1| Zea mays clone 4281 mRNA sequence Length = 659 Score = 351 bits (177), Expect = 2e-93 Identities = 330/381 (86%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 47 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 106 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 ||||||||||||||||||| ||||| || ||||| ||||| ||||| || | ||||||| Sbjct: 107 ggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 166 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 167 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 226 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 227 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 286 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 287 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 346 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 347 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 406 Query: 572 gaatacgtcaagtcgcactag 592 || |||||||| ||||||||| Sbjct: 407 gagtacgtcaaatcgcactag 427
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 351 bits (177), Expect = 2e-93 Identities = 330/381 (86%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 201 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 260 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 ||||||||||||||||||| ||||| || ||||| ||||| ||||| || | ||||||| Sbjct: 261 ggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 320 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 321 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 380 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 381 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 440 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 441 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 500 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 501 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 560 Query: 572 gaatacgtcaagtcgcactag 592 || |||||||| ||||||||| Sbjct: 561 gagtacgtcaaatcgcactag 581
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 327 bits (165), Expect = 4e-86 Identities = 327/381 (85%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 108 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 167 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 | | | ||||||||||||| ||||| || ||||| ||||| ||||| || | ||||||| Sbjct: 168 gggggtgatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 227 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 228 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 287 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 288 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 347 Query: 452 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 511 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 348 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 407 Query: 512 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 571 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 408 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 467 Query: 572 gaatacgtcaagtcgcactag 592 || |||||||| ||||||||| Sbjct: 468 gagtacgtcaaatcgcactag 488
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 299 bits (151), Expect = 8e-78 Identities = 295/343 (86%) Strand = Plus / Plus Query: 250 gcagcttgtgatgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagc 309 |||||| |||||||||||||||||||||||||| || ||||| ||||| |||||||| || Sbjct: 9 gcagctcgtgatgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggc 68 Query: 310 tgcaaaagcgattgggaagcatgctgctcagatctgtgtgcttgctgaggattgcgacca 369 ||| || || || | |||||| || |||||| | || |||||||||||||| || ||||| Sbjct: 69 tgccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgacca 128 Query: 370 gcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcac 429 ||| ||||| || ||||| || ||||||||||| ||||||||||| |||||| ||||||| Sbjct: 129 gccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcac 188 Query: 430 cgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgaggg 489 || ||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tgttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgaggg 248 Query: 490 caaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattc 549 ||||||||| ||||| || |||||||| || ||||| || |||||||| |||||||| || Sbjct: 249 caaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatc 308 Query: 550 ggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 592 ||||| ||| |||| |||||||| || ||||||||||||||| Sbjct: 309 tgagggccttaacatagtgcaggagtatgtcaagtcgcactag 351
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 283 bits (143), Expect = 5e-73 Identities = 224/251 (89%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2647144 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 2647203 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 2647204 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 2647263 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 2647264 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 2647323 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 2647324 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 2647383 Query: 452 ggcgagtgggc 462 ||||||||||| Sbjct: 2647384 ggcgagtgggc 2647394 Score = 276 bits (139), Expect = 1e-70 Identities = 223/251 (88%) Strand = Plus / Minus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7266262 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 7266203 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 || ||||||||||| || || ||||| |||||||| || || || || |||| ||||||| Sbjct: 7266202 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 7266143 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 7266142 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 7266083 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 7266082 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 7266023 Query: 452 ggcgagtgggc 462 ||||||||||| Sbjct: 7266022 ggcgagtgggc 7266012 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 466 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 525 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 526 tgtgaagg 533 ||| |||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 525 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 526 tgtgaagg 533 ||| |||| Sbjct: 7265687 tgtcaagg 7265680 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 531 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 590 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 2648256 Query: 591 ag 592 || Sbjct: 2648257 ag 2648258
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 283 bits (143), Expect = 5e-73 Identities = 224/251 (89%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 72862 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 72921 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 |||||||||||||| ||||| ||||| |||||||| ||||| || || || | ||||||| Sbjct: 72922 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 72981 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 72982 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 73041 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 73042 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 73101 Query: 452 ggcgagtgggc 462 ||||||||||| Sbjct: 73102 ggcgagtgggc 73112 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 466 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 525 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 526 tgtgaagg 533 ||| |||| Sbjct: 73820 tgtcaagg 73827 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 531 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 590 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 73974 Query: 591 ag 592 || Sbjct: 73975 ag 73976
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 276 bits (139), Expect = 1e-70 Identities = 223/251 (88%) Strand = Plus / Minus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106746 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 106687 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 || ||||||||||| || || ||||| |||||||| || || || || |||| ||||||| Sbjct: 106686 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 106627 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 106626 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 106567 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 106566 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 106507 Query: 452 ggcgagtgggc 462 ||||||||||| Sbjct: 106506 ggcgagtgggc 106496 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 525 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 526 tgtgaagg 533 ||| |||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 276 bits (139), Expect = 1e-70 Identities = 223/251 (88%) Strand = Plus / Plus Query: 212 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 271 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1085 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 1144 Query: 272 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgggaagcat 331 || ||||||||||| || || ||||| |||||||| || || || || |||| ||||||| Sbjct: 1145 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 1204 Query: 332 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 391 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 1205 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 1264 Query: 392 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 451 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 1265 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 1324 Query: 452 ggcgagtgggc 462 ||||||||||| Sbjct: 1325 ggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 466 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 525 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 526 tgtgaagg 533 ||| |||| Sbjct: 1660 tgtcaagg 1667
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 119 bits (60), Expect = 2e-23 Identities = 159/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| |||||||||||||||||||| || Sbjct: 234 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtgaagcttgttaa 293 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 294 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 353 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 354 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 413 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 414 ctcatgtctcgt 425
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome (AT2G32060) mRNA, complete cds Length = 694 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| || Sbjct: 253 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgttaa 312 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 313 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 372 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 373 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 432 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 433 ctcatgtctcgt 444
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome (AT2G32060) mRNA, complete cds Length = 759 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| || Sbjct: 291 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgttaa 350 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 351 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 410 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 411 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 470 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 471 ctcatgtctcgt 482
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome (AT2G32060) mRNA, complete cds Length = 723 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| || Sbjct: 255 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgttaa 314 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 315 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 374 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 375 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 434 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 435 ctcatgtctcgt 446
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| || Sbjct: 177 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgttaa 236 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 237 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 296 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 297 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 356 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 357 ctcatgtctcgt 368
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| || Sbjct: 255 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgttaa 314 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 315 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 374 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 375 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 434 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 435 ctcatgtctcgt 446
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaa 393 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| || Sbjct: 291 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgttaa 350 Query: 394 ggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttgg 453 || || || ||||| |||| | | | ||| | || || || ||||||||||| || || Sbjct: 351 agctctttgcgctgaccacagcatcaaattgcttactgttccaagtgccaaaacactcgg 410 Query: 454 cgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctg 513 ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| || || || Sbjct: 411 cgaatgggctggtctttgcaagattgattctgagggcaatgcaaggaaggttgttggatg 470 Query: 514 ctcatgtgtcgt 525 ||||||| |||| Sbjct: 471 ctcatgtctcgt 482
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome (AT1G15930) mRNA, complete cds Length = 861 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 533 gact 536 |||| Sbjct: 559 gact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome (AT1G15930) mRNA, complete cds Length = 758 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 533 gact 536 |||| Sbjct: 456 gact 459
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 255 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 256 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 315 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 316 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 375 Query: 533 gact 536 |||| Sbjct: 376 gact 379
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 533 gact 536 |||| Sbjct: 559 gact 562
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 533 gact 536 |||| Sbjct: 456 gact 459
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 252 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 311 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 312 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 371 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 372 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 431 Query: 533 gact 536 |||| Sbjct: 432 gact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 95.6 bits (48), Expect = 2e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 412 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 241 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 300 Query: 413 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 472 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 301 gaagtcaggttgctaacagtaccaagtgccaagacccttggcgaatgggctggtctctgc 360 Query: 473 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 532 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 361 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 420 Query: 533 gact 536 |||| Sbjct: 421 gact 424
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 93.7 bits (47), Expect = 9e-16 Identities = 140/171 (81%) Strand = Plus / Plus Query: 366 accagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttgg 425 |||||||||||||||| |||||||| ||||| ||||||||||| ||| | || ||| Sbjct: 268 accagcctgattatgtcaagcttgtgaaggctctctgtgctgatcacgaagtcaggttgc 327 Query: 426 tcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctg 485 | || || || |||||||| || |||||||| |||||||| || ||||||||||| |||| Sbjct: 328 taacagttccaagtgccaagacccttggcgaatgggctggtctctgcaagattgattctg 387 Query: 486 agggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggact 536 |||| || || || ||||| || || ||||||||| | ||||| ||||||| Sbjct: 388 agggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaaggact 438
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 89.7 bits (45), Expect = 1e-14 Identities = 290/369 (78%), Gaps = 2/369 (0%) Strand = Plus / Minus Query: 218 cttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtgct 277 ||||| |||||||||||| | ||||| ||||||||||| ||| | | |||||| | ||| Sbjct: 581 cttggggagcccatggacatcatgaccgctctgcagctggtgctcaggaagtctaaagct 522 Query: 278 catgatggccttg-tcaagggactccgtgaagctgcaaaagcgattgggaagcatgctgc 336 |||| || |||| || ||| ||||| ||||| ||| || | ||||| |||||||||||| Sbjct: 521 catggaggacttgctcgagg-actccatgaaggtgctaaggtgattgagaagcatgctgc 463 Query: 337 tcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggc 396 ||| | |||||||| || ||||| ||||||||||| || ||||| ||||| ||||| || Sbjct: 462 gcagctttgtgtgctagcagaggactgcgaccagccagactatgtcaagctggtcaaagc 403 Query: 397 actctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcga 456 || |||||||| ||||| || ||| | || || || | ||| |||||||||||||| Sbjct: 402 tctttgtgctgatcacaatgtcagtttgattacagttcccaatgcaaaaactcttggcga 343 Query: 457 gtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctc 516 |||||||| | ||||| ||||| ||||| || || ||||| || || || || || Sbjct: 342 atgggctggtttatgcaaaattgattctgaagggaaagcaaggaaagttgttggttgtgg 283 Query: 517 atgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaata 576 ||||| || |||||||| ||||| ||||| | |||||||| || ||||| ||||| || Sbjct: 282 ctgtgttgtcgtgaaggattatggggaagagactgagggtctccatatcgtccaggagta 223 Query: 577 cgtcaagtc 585 ||| ||||| Sbjct: 222 cgtgaagtc 214
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 344 tgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgt 403 ||||| ||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 18467 tgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggctctttgt 18408 Query: 404 gctgagcacaa 414 ||||||||||| Sbjct: 18407 gctgagcacaa 18397
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 67.9 bits (34), Expect = 5e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 304 tgaagctgcaaaagcgattgggaagcatgctgctcagatctgtgtgcttgctgaggattg 363 ||||| |||||||| ||||| |||||||||||| ||| | ||||| || ||||| ||||| Sbjct: 44266 tgaaggtgcaaaagtgattgagaagcatgctgcacagctttgtgttctagctgaagattg 44207 Query: 364 cgaccagcctgattatgt 381 ||||| ||||||||||| Sbjct: 44206 tgaccaacctgattatgt 44189
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 67.9 bits (34), Expect = 5e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 325 gaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgatta 378 |||||||||||| ||| ||||||| |||||||||||||| ||||| |||||||| Sbjct: 54494 gaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacctgatta 54441
>dbj|AB272227.1| Triticum aestivum TaGRP2 mRNA for glycine-rich RNA-binding protein, complete cds Length = 832 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 19 ggcttctcctccccactcagtcctcggttccc 50 |||||||||||||||||||||||||||||||| Sbjct: 2 ggcttctcctccccactcagtcctcggttccc 33
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 63.9 bits (32), Expect = 8e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 466 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 525 ||||||||||||||| ||||||||||| ||||| ||||| || || ||||||||| |||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctcatgtctcgt 49995 Score = 58.0 bits (29), Expect = 5e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 334 tgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgt 390 ||||||| ||||||| || ||||| |||||| |||| ||||||||||| |||||||| Sbjct: 49716 tgctcagctctgtgtcctggctgaagattgcaaccaacctgattatgtcaagcttgt 49772
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 63.9 bits (32), Expect = 8e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 353 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctga 408 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 7536 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctga 7591
>gb|DQ673390.1| Diaphorina citri putative ribosomal protein S12 mRNA, complete cds Length = 423 Score = 58.0 bits (29), Expect = 5e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 487 gggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtga 543 ||||||||||||||||||||| ||||| || ||||| || | |||||||||||||| Sbjct: 306 gggcaaggcaagaaaggtggttggctgttcctgtgttgtcattaaggactatggtga 362
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 54.0 bits (27), Expect = 8e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 434 cctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaa 492 |||| |||||| || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 337 cctaatgccaagacacttggtgaatgggctggtctgtgcaagattgactctgaaggcaa 395
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 54.0 bits (27), Expect = 8e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 491 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 533 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 10939 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 10981 Score = 50.1 bits (25), Expect = 0.013 Identities = 31/33 (93%) Strand = Plus / Plus Query: 274 tgctcatgatggccttgtcaagggactccgtga 306 ||||||||||| |||||||||||| |||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtga 8792 Score = 48.1 bits (24), Expect = 0.049 Identities = 42/48 (87%) Strand = Plus / Plus Query: 419 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 466 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 10664 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 10711
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 54.0 bits (27), Expect = 8e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 491 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 533 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32367682 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32367724 Score = 50.1 bits (25), Expect = 0.013 Identities = 31/33 (93%) Strand = Plus / Plus Query: 274 tgctcatgatggccttgtcaagggactccgtga 306 ||||||||||| |||||||||||| |||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtga 32365535 Score = 48.1 bits (24), Expect = 0.049 Identities = 42/48 (87%) Strand = Plus / Plus Query: 419 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 466 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32367407 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32367454
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 54.0 bits (27), Expect = 8e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 491 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 533 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 128844 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 128886 Score = 50.1 bits (25), Expect = 0.013 Identities = 31/33 (93%) Strand = Plus / Plus Query: 274 tgctcatgatggccttgtcaagggactccgtga 306 ||||||||||| |||||||||||| |||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtga 126697 Score = 48.1 bits (24), Expect = 0.049 Identities = 42/48 (87%) Strand = Plus / Plus Query: 419 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 466 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 128569 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 128616
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 50.1 bits (25), Expect = 0.013 Identities = 73/89 (82%) Strand = Plus / Plus Query: 449 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 508 |||||||||||||| || || |||||||| ||| || |||||||| || || ||||| Sbjct: 319 cttggcgagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtc 378 Query: 509 ggctgctcatgtgtcgttgtgaaggacta 537 |||||| |||||||| ||||||||||| Sbjct: 379 ggctgcagttgtgtcgtggtgaaggacta 407
>ref|XM_001072054.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2610034E18 gene (predicted) (RGD1309007_predicted), mRNA Length = 1067 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 cttctcctccccactcagtcctc 43 ||||||||||||||||||||||| Sbjct: 327 cttctcctccccactcagtcctc 305
>ref|XM_215595.4| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2610034E18 gene (predicted) (RGD1309007_predicted), mRNA Length = 1067 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 cttctcctccccactcagtcctc 43 ||||||||||||||||||||||| Sbjct: 327 cttctcctccccactcagtcctc 305
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 ttgactctgagggcaaggcaagaaagg 503 |||||||||||| |||||||||||||| Sbjct: 166816 ttgactctgaggccaaggcaagaaagg 166842
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 ttgactctgagggcaaggcaagaaagg 503 |||||||||||| |||||||||||||| Sbjct: 149471 ttgactctgaggccaaggcaagaaagg 149497
>dbj|AB257857.1| Mus musculus KIAA1768 mRNA for KIAA1768, complete cds Length = 7023 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2349 ttgactctgagggcaaggcaag 2328
>dbj|AK147335.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1014L18 product:Very KIND protein (Fragment), full insert sequence Length = 7300 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2626 ttgactctgagggcaaggcaag 2605
>dbj|AK147693.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1108L06 product:Very KIND protein (Fragment), full insert sequence Length = 6954 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2279 ttgactctgagggcaaggcaag 2258
>dbj|AK147672.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1106C24 product:Very KIND protein (Fragment), full insert sequence Length = 7026 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2352 ttgactctgagggcaaggcaag 2331
>dbj|AK046817.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830014K08 product:Very KIND protein (Fragment) homolog [Mus musculus], full insert sequence Length = 3667 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2362 ttgactctgagggcaaggcaag 2341
>ref|NM_177261.3| Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA Length = 7175 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2483 ttgactctgagggcaaggcaag 2462
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 125647 ttgactctgagggcaaggcaag 125626
>emb|AJ580324.2|MMU580324 Mus musculus mRNA for Very KIND protein (VKIND gene) Length = 5229 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ttgactctgagggcaaggcaag 498 |||||||||||||||||||||| Sbjct: 2134 ttgactctgagggcaaggcaag 2113
>gb|AC187115.2| Gallus gallus BAC clone CH261-60B9 from chromosome z, complete sequence Length = 241696 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 ggcaaggcaagaaaggtggtg 508 ||||||||||||||||||||| Sbjct: 5645 ggcaaggcaagaaaggtggtg 5625
>ref|XM_237520.4| PREDICTED: Rattus norvegicus elastin microfibril interfacer 2 (predicted) (Emilin2_predicted), mRNA Length = 2796 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tcaggggttggcttctcctcc 30 ||||||||||||||||||||| Sbjct: 530 tcaggggttggcttctcctcc 510
>gb|AC090587.10| Homo sapiens chromosome 11, clone RP11-348A20, complete sequence Length = 165459 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cctcccaggagcgccgagtcc 98 ||||||||||||||||||||| Sbjct: 162028 cctcccaggagcgccgagtcc 162048
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 caaggcaagaaaggtggtggg 510 ||||||||||||||||||||| Sbjct: 146770 caaggcaagaaaggtggtggg 146790
>emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in linkage group 14, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 ttgatgactgctctgcagctt 256 ||||||||||||||||||||| Sbjct: 159631 ttgatgactgctctgcagctt 159651
>emb|AL358933.15| Human DNA sequence from clone RP1-265C24 on chromosome 6 Contains the ZNF192 gene for zinc finger protein 192 (LD5-1), the gene for a novel SCAN box protein, the 5' end of a novel gene, ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 55480 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 tccctccgtcccccaacagatctac 120 |||||||| |||||||||||||||| Sbjct: 13391 tccctccgccccccaacagatctac 13415
>gb|AF139917.1|AF139917 Homo sapiens STIM1 gene, promoter sequence Length = 2129 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cctcccaggagcgccgagtcc 98 ||||||||||||||||||||| Sbjct: 1542 cctcccaggagcgccgagtcc 1562 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 126,858,122 Number of extensions: 6359009 Number of successful extensions: 108876 Number of sequences better than 10.0: 69 Number of HSP's gapped: 108875 Number of HSP's successfully gapped: 100 Length of query: 811 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 789 Effective length of database: 18,508,616,841 Effective search space: 14603298687549 Effective search space used: 14603298687549 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
