ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf94k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5TM26:BAT2_MACMU Large proline-rich protein BAT2 - Macaca mulat... 33 1.1
2P48634:BAT2_HUMAN Large proline-rich protein BAT2 - Homo sapiens... 33 1.1
3Q96J92:WNK4_HUMAN Serine/threonine-protein kinase WNK4 - Homo sa... 32 1.4
4Q767L8:MDC1_PIG Mediator of DNA damage checkpoint protein 1 - Su... 32 2.3
5O08784:TCOF_MOUSE Treacle protein - Mus musculus (Mouse) 30 5.2
6P22807:SLOU_DROME Homeobox protein slou - Drosophila melanogaste... 30 8.9
7Q9V4W1:GLE1_DROME Nucleoporin GLE1 - Drosophila melanogaster (Fr... 30 8.9

>Q5TM26:BAT2_MACMU Large proline-rich protein BAT2 - Macaca mulatta (Rhesus macaque)|
          Length = 2160
 Score = 32.7 bits (73), Expect = 1.1
 Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
 Frame = +2

Query: 134  QIPLLHF--------PPRVPLCRLPSPIASRNKS*AEFPGPPKLLRHGLSPAR--PRDLG 283
            Q+P+++F        P   PL  LP   A +  S A  P P    R   SPAR  P  LG
Sbjct: 1990 QLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLG 2049

Query: 284  H*PYPPVDANRFRDHAGMPGAENGAP*LPQSSLKPPT 394
                 PV+   F+D+  +     G    P SS  PPT
Sbjct: 2050 RAELHPVELKPFQDYQKLSSNLGG----PGSSRTPPT 2082



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>P48634:BAT2_HUMAN Large proline-rich protein BAT2 - Homo sapiens (Human)|
          Length = 2157

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
 Frame = +2

Query: 134  QIPLLHF--------PPRVPLCRLPSPIASRNKS*AEFPGPPKLLRHGLSPAR--PRDLG 283
            Q+P+++F        P   PL  LP   A +  S A  P P    R   SPAR  P  LG
Sbjct: 1987 QLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLG 2046

Query: 284  H*PYPPVDANRFRDHAGMPGAENGAP*LPQSSLKPPT 394
                 PV+   F+D+  +     G    P SS  PPT
Sbjct: 2047 RAELHPVELKPFQDYQKLSSNLGG----PGSSRTPPT 2079



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>Q96J92:WNK4_HUMAN Serine/threonine-protein kinase WNK4 - Homo sapiens (Human)|
          Length = 1243

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 88   CHHGQAKFEIGRADSSNTPAPFPSKSPVMPPSIANCFQE*IMSRIPWST--EASPPWFKP 261
            CH   + F    +  S+ P+P P+ SP +P S +       +S+ PWS+    SPP F P
Sbjct: 836  CHPSPSPFSPISSQVSSNPSPHPTSSP-LPFSSSTPEFPVPLSQCPWSSLPTTSPPTFSP 894



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>Q767L8:MDC1_PIG Mediator of DNA damage checkpoint protein 1 - Sus scrofa (Pig)|
          Length = 2042

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
 Frame = +2

Query: 158  PRVPLCRLPSPIASRNKS*AEFPGPPKLLRHGLSPARPRDLGH*PYPPVDANRFR-DHAG 334
            P VP   L +P    ++S  + P P       L P+ P D    P P   A R R   A 
Sbjct: 1248 PVVPKPTLRAPRGRTHRSSVKTPEPNIPTAPELRPSTPTDQPVAPEPLSRATRGRTPRAS 1307

Query: 335  MPGAENGAP*LPQS-----------SLKPPTASVRAREGRR*TRYLSASHPLPSVA 469
            +   E   P  P+            + KP + + R R  R   +  +AS PLPS +
Sbjct: 1308 VKSPEQNVPTAPEHPQPSTPTDQPVTPKPTSRATRGRAHRSSVKTPAASEPLPSAS 1363



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>O08784:TCOF_MOUSE Treacle protein - Mus musculus (Mouse)|
          Length = 1320

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 211 MSRIPWSTEASPPWFKPRSTSRSRALALPSSGCKPLP*SRWYARCREWSPLATAIFVEAT 390
           + R+P +    PP   P +++  +A+A P+ G  P+P S   AR +   P A      AT
Sbjct: 684 LGRLPQAKANPPPTKTPPASASGKAVAAPTKGKPPVPNSTVSARGQRSVPAAGKAGAPAT 743



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>P22807:SLOU_DROME Homeobox protein slou - Drosophila melanogaster (Fruit fly)|
          Length = 659

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +1

Query: 85  HCH-HGQAKFEIGRADSSNTPAPFPSKSPVMPPSIANCFQE*IMSRIPWSTEASPPWFKP 261
           H H H  A F +    SS+T  P P+ SP+ PP+      +  M     S   +PP   P
Sbjct: 229 HPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHSDQQM-----SPPIAPPQNPP 283

Query: 262 RSTS--RSRALALPS 300
            S+   + + +A PS
Sbjct: 284 HSSQPPQQQQVAAPS 298



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>Q9V4W1:GLE1_DROME Nucleoporin GLE1 - Drosophila melanogaster (Fruit fly)|
          Length = 677

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 79  ETHCHHGQAKFEIGRADSSNTPAPFPSKSPVMPPS 183
           E+     Q + E  +AD++N PAP   KS  +PP+
Sbjct: 326 ESAAKEKQQEAETAKADAANVPAPLEPKSQDVPPA 360


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 118,674,423
Number of extensions: 2947887
Number of successful extensions: 7581
Number of sequences better than 10.0: 7
Number of HSP's gapped: 7560
Number of HSP's successfully gapped: 7
Length of query: 203
Length of database: 100,686,439
Length adjustment: 108
Effective length of query: 95
Effective length of database: 71,062,579
Effective search space: 6750945005
Effective search space used: 6750945005
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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