ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91l21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056612.1| Oryza sativa (japonica cultivar-group) Os03g0343400 (Os03g0343400) mRNA, complete cds Length = 1800 Score = 692 bits (349), Expect = 0.0 Identities = 640/737 (86%) Strand = Plus / Plus Query: 246 gccggagcagaggccgtctacgcgcacggggaggtgtcgcgggacgagtgccgcacggag 305 ||||| || |||||||| | ||||||||| ||||||||||| |||||||||||| | ||| Sbjct: 657 gccggtgcggaggccgtgttcgcgcacggcgaggtgtcgcgcgacgagtgccgcgccgag 716 Query: 306 gagaaggtcagcaaggccatagagaaggaaggcgtcgaggttaagtacttctggggcagc 365 |||||||| ||||||||| | |||||||| || ||||||| |||||||||||||||||| Sbjct: 717 gagaaggtgagcaaggccgttgagaaggagggaatcgaggtcaagtacttctggggcagc 776 Query: 366 acgctctaccacttagacgatctgcccttcaggctcaatgacatgccatccagctatggc 425 ||||| |||||| | || || ||||||||| | ||| | |||||||| |||| ||| || Sbjct: 777 acgctgtaccacctggatgacctgcccttccgcctcgaggacatgccgtccaactacggt 836 Query: 426 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 485 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 837 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 896 Query: 486 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 545 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 897 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 956 Query: 546 cttggactctctgcaccaccggccatggcacaggactcaaaatctgccgctggttcaaat 605 || || ||| | || ||||||||||||||||| | ||||||| |||| | |||||| | | Sbjct: 957 ctcggcctcaccgcgccaccggccatggcacatggctcaaaagctgctgttggttctact 1016 Query: 606 cttattggtggtgaagcagaagccctggaaaggctgaagaaatttgctgcagaatgttgt 665 || |||||||||||||| ||||| ||||| ||| ||||||| |||||| ||||||||||| Sbjct: 1017 ctcattggtggtgaagctgaagctctggagaggttgaagaagtttgcttcagaatgttgt 1076 Query: 666 atgcagccgaacaaagctgtcaaagatagtacccagaatagcatatatggtgctaatttc 725 |||||||| ||||||| | ||| || || || | ||||||||||||||||||||||| Sbjct: 1077 atgcagccaaacaaaggggacaaggacagcactcgagatagcatatatggtgctaatttc 1136 Query: 726 tcctgcaaaatttctccatggcttgctactggttgtctctctccacgtttcatgtatgag 785 |||||||||||||| |||||||||||||| ||||| ||||| || || |||||||||||| Sbjct: 1137 tcctgcaaaatttcaccatggcttgctacaggttgcctctcaccgcgcttcatgtatgag 1196 Query: 786 gagttgaagaagcatgccattagagcaattccatcagggtcaacacccaaggacggtgac 845 ||||||||||||||||| |||||||||||||| || |||||||||||| | ||||| Sbjct: 1197 gagttgaagaagcatgcttcaagagcaattccatcgggatcaacacccaagaatggtgat 1256 Query: 846 ggaacatcagatgctgggacaaattggttaatgtttgaattgctatggagagatttcttc 905 || ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1257 ggcacatctgatgctggtacaaattggttaatgttcgaattgctatggagagatttcttc 1316 Query: 906 aggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccggccact 965 |||||| |||||||||||||||| |||||||||||||| || |||||||| || |||||| Sbjct: 1317 aggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctgccact 1376 Query: 966 ggttgcacacctacccc 982 |||||||| |||||||| Sbjct: 1377 ggttgcacccctacccc 1393 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1115 agtaagctgttcctgcattttggaccaatttgatctcggaagagat--tgttgtatctgt 1172 ||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||| Sbjct: 1528 agtaagctgttcctgcattttggactaatttgatctcagaagagatccttttgtatctgt 1587 Query: 1173 cgaca 1177 ||||| Sbjct: 1588 cgaca 1592
>dbj|AK105611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B05, full insert sequence Length = 1800 Score = 692 bits (349), Expect = 0.0 Identities = 640/737 (86%) Strand = Plus / Plus Query: 246 gccggagcagaggccgtctacgcgcacggggaggtgtcgcgggacgagtgccgcacggag 305 ||||| || |||||||| | ||||||||| ||||||||||| |||||||||||| | ||| Sbjct: 657 gccggtgcggaggccgtgttcgcgcacggcgaggtgtcgcgcgacgagtgccgcgccgag 716 Query: 306 gagaaggtcagcaaggccatagagaaggaaggcgtcgaggttaagtacttctggggcagc 365 |||||||| ||||||||| | |||||||| || ||||||| |||||||||||||||||| Sbjct: 717 gagaaggtgagcaaggccgttgagaaggagggaatcgaggtcaagtacttctggggcagc 776 Query: 366 acgctctaccacttagacgatctgcccttcaggctcaatgacatgccatccagctatggc 425 ||||| |||||| | || || ||||||||| | ||| | |||||||| |||| ||| || Sbjct: 777 acgctgtaccacctggatgacctgcccttccgcctcgaggacatgccgtccaactacggt 836 Query: 426 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 485 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 837 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 896 Query: 486 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 545 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 897 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 956 Query: 546 cttggactctctgcaccaccggccatggcacaggactcaaaatctgccgctggttcaaat 605 || || ||| | || ||||||||||||||||| | ||||||| |||| | |||||| | | Sbjct: 957 ctcggcctcaccgcgccaccggccatggcacatggctcaaaagctgctgttggttctact 1016 Query: 606 cttattggtggtgaagcagaagccctggaaaggctgaagaaatttgctgcagaatgttgt 665 || |||||||||||||| ||||| ||||| ||| ||||||| |||||| ||||||||||| Sbjct: 1017 ctcattggtggtgaagctgaagctctggagaggttgaagaagtttgcttcagaatgttgt 1076 Query: 666 atgcagccgaacaaagctgtcaaagatagtacccagaatagcatatatggtgctaatttc 725 |||||||| ||||||| | ||| || || || | ||||||||||||||||||||||| Sbjct: 1077 atgcagccaaacaaaggggacaaggacagcactcgagatagcatatatggtgctaatttc 1136 Query: 726 tcctgcaaaatttctccatggcttgctactggttgtctctctccacgtttcatgtatgag 785 |||||||||||||| |||||||||||||| ||||| ||||| || || |||||||||||| Sbjct: 1137 tcctgcaaaatttcaccatggcttgctacaggttgcctctcaccgcgcttcatgtatgag 1196 Query: 786 gagttgaagaagcatgccattagagcaattccatcagggtcaacacccaaggacggtgac 845 ||||||||||||||||| |||||||||||||| || |||||||||||| | ||||| Sbjct: 1197 gagttgaagaagcatgcttcaagagcaattccatcgggatcaacacccaagaatggtgat 1256 Query: 846 ggaacatcagatgctgggacaaattggttaatgtttgaattgctatggagagatttcttc 905 || ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1257 ggcacatctgatgctggtacaaattggttaatgttcgaattgctatggagagatttcttc 1316 Query: 906 aggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccggccact 965 |||||| |||||||||||||||| |||||||||||||| || |||||||| || |||||| Sbjct: 1317 aggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctgccact 1376 Query: 966 ggttgcacacctacccc 982 |||||||| |||||||| Sbjct: 1377 ggttgcacccctacccc 1393 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1115 agtaagctgttcctgcattttggaccaatttgatctcggaagagat--tgttgtatctgt 1172 ||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||| Sbjct: 1528 agtaagctgttcctgcattttggactaatttgatctcagaagagatccttttgtatctgt 1587 Query: 1173 cgaca 1177 ||||| Sbjct: 1588 cgaca 1592
>gb|AY107492.1| Zea mays PCO060628 mRNA sequence Length = 1028 Score = 563 bits (284), Expect = e-157 Identities = 527/608 (86%) Strand = Plus / Plus Query: 348 aagtacttctggggcagcacgctctaccacttagacgatctgcccttcaggctcaatgac 407 |||||||||||||| |||||||| |||||| | || || || |||||| | ||| | ||| Sbjct: 67 aagtacttctggggtagcacgctataccacgtggaagaccttcccttccgcctcgaggac 126 Query: 408 atgccatccagctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtg 467 ||||| |||| ||||||||| ||||||||||| || |||||||||||||| || |||||| Sbjct: 127 atgccgtccaactatggcggcttcagggaggccgtgaaggggttggaggtcagaaaggtg 186 Query: 468 ctggacgcgccagaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgac 527 ||||| || || || ||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 187 ctggaggctcccgaggaggtcaagtgcgtgcccatgaagaatgtgctcgagcccggtgac 246 Query: 528 atccccacgcttggtgagcttggactctctgcaccaccggccatggcacaggactcaaaa 587 ||||||||||||| |||||| || ||| |||| ||||| |||||| |||||||||||||| Sbjct: 247 atccccacgcttgctgagctcgggctcactgcgccaccagccatgtcacaggactcaaaa 306 Query: 588 tctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggctgaagaaa 647 |||| | ||| || | ||| ||||||||||| ||||||| ||||| ||| ||||||| Sbjct: 307 cctgctgttggctctactctcattggtggtgagacagaagctctggagaggttgaagaag 366 Query: 648 tttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtacccagaatagc 707 |||||||||||||| | ||||||||| ||||||| | |||| | |||||| ||||| Sbjct: 367 tttgctgcagaatgctctatgcagccaaacaaagtagacaaaagcaatacccaagatagc 426 Query: 708 atatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttgtctctct 767 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 427 atatatggtgctaatttctcttgcaaaatttctccatggcttgctacaggttgcctctct 486 Query: 768 ccacgtttcatgtatgaggagttgaagaagcatgccattagagcaattccatcagggtca 827 ||||| ||||||||||||||||||||||||||||| | || ||||||||| | |||||| Sbjct: 487 ccacggttcatgtatgaggagttgaagaagcatgctactaaagcaattccttttgggtca 546 Query: 828 acacccaaggacggtgacggaacatcagatgctgggacaaattggttaatgtttgaattg 887 ||||||||| | ||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 547 acacccaagaataatgatggcacatctgatgctggaacaaattggttaatgtttgagttg 606 Query: 888 ctatggagagatttcttcaggttcgtcacaaagaagtacagctctgcacagaagacatcc 947 || ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 607 ctgtggagagatttcttcaggttcatcacaaagaagtacagctctgtacagaagacatct 666 Query: 948 gaagttgc 955 |||||||| Sbjct: 667 gaagttgc 674
>gb|BT018292.1| Zea mays clone EL01T0205D06.c mRNA sequence Length = 996 Score = 531 bits (268), Expect = e-147 Identities = 523/608 (86%) Strand = Plus / Plus Query: 348 aagtacttctggggcagcacgctctaccacttagacgatctgcccttcaggctcaatgac 407 |||||||||||||| |||||||| |||||| | || || || |||||| | ||| | ||| Sbjct: 68 aagtacttctggggtagcacgctgtaccacgtggaagaccttcccttccgcctcgacgac 127 Query: 408 atgccatccagctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtg 467 ||||| |||| ||||||||| ||||||||||| || ||| || |||| || || |||||| Sbjct: 128 atgccgtccaactatggcggcttcagggaggccgtgaagaggctggacgtcagaaaggtg 187 Query: 468 ctggacgcgccagaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgac 527 ||||| ||||| || ||||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 188 ctggaggcgcccgaggaggtcaagtgcgtgcccatgaagaatgtgctcgagcccggcgac 247 Query: 528 atccccacgcttggtgagcttggactctctgcaccaccggccatggcacaggactcaaaa 587 ||||||||||||| |||||| || ||| |||| ||||| |||||||||||||| || ||| Sbjct: 248 atccccacgcttgctgagctcggtctcactgcgccaccagccatggcacaggattcgaaa 307 Query: 588 tctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggctgaagaaa 647 |||| | ||| || | ||| ||||||||||| ||| ||| ||||| ||| ||||||| Sbjct: 308 cctgctgttggctctactctcattggtggtgagacaggagctctggagaggttgaagaag 367 Query: 648 tttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtacccagaatagc 707 |||||||||||||| | ||||||||| |||||||| | ||| | |||||| ||||| Sbjct: 368 tttgctgcagaatgctctatgcagccaaacaaagcagataaaagcaatacccaagatagc 427 Query: 708 atatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttgtctctct 767 |||||||||||| |||||||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 428 atatatggtgctgatttctcctgcaaaatttctccatggctcgctacaggttgcctttct 487 Query: 768 ccacgtttcatgtatgaggagttgaagaagcatgccattagagcaattccatcagggtca 827 ||| | ||||||||||||||||||||||||||||| | |||||||||||| || |||||| Sbjct: 488 ccaaggttcatgtatgaggagttgaagaagcatgctactagagcaattccttctgggtca 547 Query: 828 acacccaaggacggtgacggaacatcagatgctgggacaaattggttaatgtttgaattg 887 ||||||||| | ||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 548 acacccaagaataatgatggcacatctgatgctgggacaaattggttaatgtttgagttg 607 Query: 888 ctatggagagatttcttcaggttcgtcacaaagaagtacagctctgcacagaagacatcc 947 |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 608 ctatggagagatttcttcaggttcatcacaaagaagtacagctctgtacagaagacatct 667 Query: 948 gaagttgc 955 |||||||| Sbjct: 668 gaagttgc 675
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni Length = 312 Score = 454 bits (229), Expect = e-124 Identities = 229/229 (100%) Strand = Plus / Plus Query: 16 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 61 Query: 76 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 121 Query: 136 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 181 Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 230
>emb|AJ303112.1|HVU303112 Hordeum vulgare partial mRNA for lectin, clone 4B 9T7 Length = 189 Score = 325 bits (164), Expect = 2e-85 Identities = 167/168 (99%) Strand = Plus / Plus Query: 357 tggggcagcacgctctaccacttagacgatctgcccttcaggctcaatgacatgccatcc 416 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 tggggcggcacgctctaccacttagacgatctgcccttcaggctcaatgacatgccatcc 66 Query: 417 agctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 agctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcg 126 Query: 477 ccagaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggt 524 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ccagaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggt 174
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 293 bits (148), Expect = 8e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 246 gccggagcagaggccgtctacgcgcacggggaggtgtcgcgggacgagtgccgcacggag 305 ||||| || |||||||| | ||||||||| ||||||||||| |||||||||||| | ||| Sbjct: 7866 gccggtgcggaggccgtgttcgcgcacggcgaggtgtcgcgcgacgagtgccgcgccgag 7925 Query: 306 gagaaggtcagcaaggccatagagaaggaaggcgtcgaggttaagtacttctggggcagc 365 |||||||| ||||||||| | |||||||| || ||||||| |||||||||||||||||| Sbjct: 7926 gagaaggtgagcaaggccgttgagaaggagggaatcgaggtcaagtacttctggggcagc 7985 Query: 366 acgctctaccacttagacgatctgcccttcaggctcaatgacatgccatccagctatggc 425 ||||| |||||| | || || ||||||||| | ||| | |||||||| |||| ||| || Sbjct: 7986 acgctgtaccacctggatgacctgcccttccgcctcgaggacatgccgtccaactacggt 8045 Query: 426 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 485 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 8046 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 8105 Query: 486 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 545 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 8106 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 8165 Query: 546 cttggactctctgcaccaccggccatggcaca 577 || || ||| | || ||||||||||||||||| Sbjct: 8166 ctcggcctcaccgcgccaccggccatggcaca 8197 Score = 210 bits (106), Expect = 9e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 581 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 640 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 9456 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 9515 Query: 641 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 700 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 9516 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 9575 Query: 701 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 760 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 9576 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 9635 Query: 761 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 802 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 9636 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 9677 Score = 133 bits (67), Expect = 2e-27 Identities = 94/103 (91%) Strand = Plus / Plus Query: 807 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 866 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 9792 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 9851 Query: 867 aattggttaatgtttgaattgctatggagagatttcttcaggt 909 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9852 aattggttaatgttcgaattgctatggagagatttcttcaggt 9894 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 901 tcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccgg 960 |||| |||||| |||||||||||||||| |||||||||||||| || |||||||| || | Sbjct: 10133 tctttaggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctg 10192 Query: 961 ccactggttgcacacctacccc 982 ||||||||||||| |||||||| Sbjct: 10193 ccactggttgcacccctacccc 10214 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1115 agtaagctgttcctgcattttggaccaatttgatctcggaagagat--tgttgtatctgt 1172 ||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||| Sbjct: 10349 agtaagctgttcctgcattttggactaatttgatctcagaagagatccttttgtatctgt 10408 Query: 1173 cgaca 1177 ||||| Sbjct: 10409 cgaca 10413
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 293 bits (148), Expect = 8e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 246 gccggagcagaggccgtctacgcgcacggggaggtgtcgcgggacgagtgccgcacggag 305 ||||| || |||||||| | ||||||||| ||||||||||| |||||||||||| | ||| Sbjct: 12766413 gccggtgcggaggccgtgttcgcgcacggcgaggtgtcgcgcgacgagtgccgcgccgag 12766472 Query: 306 gagaaggtcagcaaggccatagagaaggaaggcgtcgaggttaagtacttctggggcagc 365 |||||||| ||||||||| | |||||||| || ||||||| |||||||||||||||||| Sbjct: 12766473 gagaaggtgagcaaggccgttgagaaggagggaatcgaggtcaagtacttctggggcagc 12766532 Query: 366 acgctctaccacttagacgatctgcccttcaggctcaatgacatgccatccagctatggc 425 ||||| |||||| | || || ||||||||| | ||| | |||||||| |||| ||| || Sbjct: 12766533 acgctgtaccacctggatgacctgcccttccgcctcgaggacatgccgtccaactacggt 12766592 Query: 426 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 485 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 12766593 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 12766652 Query: 486 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 545 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 12766653 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 12766712 Query: 546 cttggactctctgcaccaccggccatggcaca 577 || || ||| | || ||||||||||||||||| Sbjct: 12766713 ctcggcctcaccgcgccaccggccatggcaca 12766744 Score = 210 bits (106), Expect = 9e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 581 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 640 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 12768003 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 12768062 Query: 641 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 700 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 12768063 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 12768122 Query: 701 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 760 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 12768123 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 12768182 Query: 761 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 802 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 12768183 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 12768224 Score = 133 bits (67), Expect = 2e-27 Identities = 94/103 (91%) Strand = Plus / Plus Query: 807 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 866 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 12768339 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 12768398 Query: 867 aattggttaatgtttgaattgctatggagagatttcttcaggt 909 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12768399 aattggttaatgttcgaattgctatggagagatttcttcaggt 12768441 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 901 tcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccgg 960 |||| |||||| |||||||||||||||| |||||||||||||| || |||||||| || | Sbjct: 12768680 tctttaggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctg 12768739 Query: 961 ccactggttgcacacctacccc 982 ||||||||||||| |||||||| Sbjct: 12768740 ccactggttgcacccctacccc 12768761 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1115 agtaagctgttcctgcattttggaccaatttgatctcggaagagat--tgttgtatctgt 1172 ||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||| Sbjct: 12768896 agtaagctgttcctgcattttggactaatttgatctcagaagagatccttttgtatctgt 12768955 Query: 1173 cgaca 1177 ||||| Sbjct: 12768956 cgaca 12768960 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 200 tggtacggccccgaccgcgtgctctacctcggcccgctctc 240 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 18182725 tggtacggccccgaccgcgtcatctacctccgcccgctctc 18182685
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 293 bits (148), Expect = 8e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 246 gccggagcagaggccgtctacgcgcacggggaggtgtcgcgggacgagtgccgcacggag 305 ||||| || |||||||| | ||||||||| ||||||||||| |||||||||||| | ||| Sbjct: 124103 gccggtgcggaggccgtgttcgcgcacggcgaggtgtcgcgcgacgagtgccgcgccgag 124162 Query: 306 gagaaggtcagcaaggccatagagaaggaaggcgtcgaggttaagtacttctggggcagc 365 |||||||| ||||||||| | |||||||| || ||||||| |||||||||||||||||| Sbjct: 124163 gagaaggtgagcaaggccgttgagaaggagggaatcgaggtcaagtacttctggggcagc 124222 Query: 366 acgctctaccacttagacgatctgcccttcaggctcaatgacatgccatccagctatggc 425 ||||| |||||| | || || ||||||||| | ||| | |||||||| |||| ||| || Sbjct: 124223 acgctgtaccacctggatgacctgcccttccgcctcgaggacatgccgtccaactacggt 124282 Query: 426 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 485 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 124283 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 124342 Query: 486 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 545 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 124343 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 124402 Query: 546 cttggactctctgcaccaccggccatggcaca 577 || || ||| | || ||||||||||||||||| Sbjct: 124403 ctcggcctcaccgcgccaccggccatggcaca 124434 Score = 210 bits (106), Expect = 9e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 581 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 640 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 125693 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 125752 Query: 641 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 700 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 125753 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 125812 Query: 701 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 760 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 125813 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 125872 Query: 761 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 802 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 125873 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 125914 Score = 133 bits (67), Expect = 2e-27 Identities = 94/103 (91%) Strand = Plus / Plus Query: 807 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 866 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 126029 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 126088 Query: 867 aattggttaatgtttgaattgctatggagagatttcttcaggt 909 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 126089 aattggttaatgttcgaattgctatggagagatttcttcaggt 126131
>gb|BC029947.1| Homo sapiens, clone IMAGE:5196281, mRNA Length = 114 Score = 129 bits (65), Expect = 3e-26 Identities = 101/112 (90%), Gaps = 7/112 (6%) Strand = Plus / Plus Query: 40 cagcagcttgctctgttccatccggcagcaagcaatggcggccacgacca---tggcgct 96 ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| Sbjct: 1 cagcagcttgctctgttccatccggcagcaa----tggcggccaccaccaccatggcgct 56 Query: 97 ctcctcccccgcgatgaagctcgccggagcctcgtacgtcctcggcggcggc 148 ||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 57 ctcctcccccgcgatcaagctcgccggagcctcctacgccctcggcggcggc 108
>emb|CT830375.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI216I02, full insert sequence Length = 1060 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 270
>ref|NM_001050625.1| Oryza sativa (japonica cultivar-group) Os01g0720500 (Os01g0720500) mRNA, complete cds Length = 1057 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 272
>ref|NM_001050028.1| Oryza sativa (japonica cultivar-group) Os01g0600900 (Os01g0600900) mRNA, complete cds Length = 1179 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 197 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 247
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Minus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 14535 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 14485
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23603670 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 23603720 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 30024476 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 30024526 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 37443416 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37443369
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 20466 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 20516
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 66369 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 66419
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 248
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 197 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 247
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 270
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 270
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 272
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 272
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 624 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 674
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 93.7 bits (47), Expect = 1e-15 Identities = 50/51 (98%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 181 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggc 231
>gb|DQ244490.1| Zea mays clone 8303 mRNA sequence Length = 1099 Score = 91.7 bits (46), Expect = 6e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 187 ctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 196 ctccggcagcccgtggtacggccccgaccgcgtgctctacctgggcccgctgtccggc 253
>gb|BC111384.1| Homo sapiens cDNA clone IMAGE:5198300, partial cds Length = 1043 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 205 gcagcccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccggc 257 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 153 tcaccatgcgcaagaccgcggccaaggc 180 |||||||||||||||||||||||||||| Sbjct: 160 tcaccatgcgcaagaccgcggccaaggc 187
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 203 gcagcccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccggc 255 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 153 tcaccatgcgcaagaccgcggccaaggc 180 |||||||||||||||||||||||||||| Sbjct: 158 tcaccatgcgcaagaccgcggccaaggc 185
>emb|CT830272.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA052A21, full insert sequence Length = 1225 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 190 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 240
>emb|CT830271.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA011A08, full insert sequence Length = 1040 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 195 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 245
>emb|CT830270.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA009P09, full insert sequence Length = 1041 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 246
>emb|CT830269.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI007G05, full insert sequence Length = 1039 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 195 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 245
>emb|CT837549.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032J21, full insert sequence Length = 1030 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 195 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 245
>ref|NM_001069474.1| Oryza sativa (japonica cultivar-group) Os09g0346500 (Os09g0346500) mRNA, complete cds Length = 1234 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 246
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 10793123 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 10793173
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 16846 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 16896
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 129741 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 129791
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 191 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 241
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 246
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 248
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 246
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 246
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 177 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggc 227
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 187 ctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||| Sbjct: 144 ctccggcagcccgtggtacggccccgaccgcgtgctctacctgggcccactgtccggc 201
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 77.8 bits (39), Expect = 9e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctc 240 ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 585 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctc 631
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 191 agcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||||||||||||||||| | ||||| |||||||||||||||||||| |||||| Sbjct: 339 agcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttccggc 392
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 71.9 bits (36), Expect = 5e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 24462467 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 24462518
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 37953 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37906
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 71.9 bits (36), Expect = 5e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 78183 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 78234
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggc 1201
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 203 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggc 253
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 194 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggc 1201
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 67.9 bits (34), Expect = 8e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 191 agcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||||||||||||||||| | ||||| ||||||||||||||| |||| |||||| Sbjct: 134 agcagcccgtggtacggctctgaccgtgtgctctacctcggctcgctttccggc 187
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 ||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 62463 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 62510
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 ||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 17802509 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 17802556
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 866 aaattggttaatgtttgaattgctatggagagatttctt 904 |||||| |||||||| ||||||||||||||||||||||| Sbjct: 14524905 aaattgattaatgttcgaattgctatggagagatttctt 14524943
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 132 acgtcctcggcggcggccgcatcaccatgcgcaagaccgcggccaag 178 ||||| |||||| |||||||||||||||||||||||||| |||||| Sbjct: 1994 acgtcttcggcgagggccgcatcaccatgcgcaagaccgccgccaag 2040
>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158261 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 866 aaattggttaatgtttgaattgctatggagagatttctt 904 |||||| |||||||| ||||||||||||||||||||||| Sbjct: 136388 aaattgattaatgttcgaattgctatggagagatttctt 136350
>gb|BT029173.1| Arabidopsis thaliana At2g47590 mRNA, complete cds Length = 1344 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 929 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1225 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1284 Query: 930 tc 931 || Sbjct: 1285 tc 1286
>dbj|AK226246.1| Arabidopsis thaliana mRNA for photolyase/blue-light receptor, clone: RAFL04-19-I15 Length = 1668 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 929 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1288 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1347 Query: 930 tc 931 || Sbjct: 1348 tc 1349
>gb|AC186746.1| Musa acuminata clone MA4_25J11, complete sequence Length = 105019 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 178 ggctgccacctccagcagcccgtggtacggccccgaccgcgt 219 ||||||| ||||| ||||||| |||||||||||||||||||| Sbjct: 36301 ggctgcctcctccggcagcccatggtacggccccgaccgcgt 36260
>ref|NM_130327.3| Arabidopsis thaliana PHR2 (PHOTOLYASE/BLUE-LIGHT RECEPTOR 2) (PHR2) mRNA, complete cds Length = 1766 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 929 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1316 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1375 Query: 930 tc 931 || Sbjct: 1376 tc 1377
>gb|AY087383.1| Arabidopsis thaliana clone 34800 mRNA, complete sequence Length = 1631 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 929 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1242 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1301 Query: 930 tc 931 || Sbjct: 1302 tc 1303
>emb|BX819772.1|CNS0A8GH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1467 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 929 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1215 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1274 Query: 930 tc 931 || Sbjct: 1275 tc 1276
>gb|AF053366.1|AF053366 Arabidopsis thaliana photolyase/blue light photoreceptor PHR2 (PHR2) mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 929 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1294 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1353 Query: 930 tc 931 || Sbjct: 1354 tc 1355
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 186 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 ||||| ||||||| |||||||| | ||||| ||||||||||||||||| |||||||| Sbjct: 143 cctccggcagcccatggtacggtgctgaccgtgtgctctacctcggcccactctccgg 200 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 148 ccgcatcaccatgcgcaagaccgcggccaaggc 180 |||| ||||||||||||||||||| || ||||| Sbjct: 99 ccgcgtcaccatgcgcaagaccgcagcaaaggc 131
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 200 tggtacggccccgaccgcgtgctctacctcggcccgctctc 240 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 94169 tggtacggccccgaccgcgtcatctacctccgcccgctctc 94129
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 870 tggttaatgtttgaattgctatggagagatttcttcaggt 909 |||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 25122 tggttaatgtatgagttgctatggagggatttcttcaggt 25083
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 188 tccagcagcccgtggtacggccccgaccgcgt 219 ||||||||||||||||||||||| |||||||| Sbjct: 25 tccagcagcccgtggtacggccctgaccgcgt 56
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 186 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctc 240 ||||||||||||| |||||||| | || || ||||||||||||||||| ||||| Sbjct: 152 cctccagcagcccatggtacggagctgatcgtgtgctctacctcggcccactctc 206
>gb|AC186755.1| Musa balbisiana clone MBP_91N22, complete sequence Length = 154246 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 186 cctccagcagcccgtggtacggccccgaccgcgt 219 ||||| ||||||| |||||||||||||||||||| Sbjct: 20578 cctccggcagcccctggtacggccccgaccgcgt 20611
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 52.0 bits (26), Expect = 0.005 Identities = 85/105 (80%), Gaps = 6/105 (5%) Strand = Plus / Plus Query: 146 ggccgcatcaccatgcgcaagaccgcgg------ccaaggctgccacctccagcagcccg 199 ||||||||||||||||||||||||| || |||||| || | ||| ||||||| Sbjct: 967 ggccgcatcaccatgcgcaagaccgtgggcaagcccaaggtggcggcgtccggcagcccc 1026 Query: 200 tggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 1027 tggtacggccccgaccgcgtcaagtacctcggccccttctccggc 1071
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||||||||||||||||| ||||| || |||||||||||| |||||||| Sbjct: 194 gcagcccgtggtacggcccggaccgtgtcaagtacctcggcccgttctccggc 246
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Minus Query: 183 ccacctccagcagcccgtggtacggccccgaccgcgt 219 ||||||| |||||||||||||||| ||||||||||| Sbjct: 76481 ccacctctggcagcccgtggtacggacccgaccgcgt 76445
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 183 ccacctccagcagcccgtggtacggccccgaccgcgt 219 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18136647 ccacctctggcagcccgtggtacggacccgaccgcgt 18136683
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 48.1 bits (24), Expect = 0.076 Identities = 45/52 (86%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 |||||||||||||||||||||| || || |||||||||||| ||||||| Sbjct: 178 gcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccgg 229
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 48.1 bits (24), Expect = 0.076 Identities = 45/52 (86%) Strand = Plus / Plus Query: 192 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 |||||||||||||||||||||| || || |||||||||||| ||||||| Sbjct: 13 gcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccgg 64
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence Length = 108802 Score = 48.1 bits (24), Expect = 0.076 Identities = 39/44 (88%) Strand = Plus / Plus Query: 703 atagcatatatggtgctaatttctcctgcaaaatttctccatgg 746 |||| ||||||||||| || || || |||||||||||||||||| Sbjct: 11470 atagtatatatggtgccaacttttcatgcaaaatttctccatgg 11513 Score = 46.1 bits (23), Expect = 0.30 Identities = 38/43 (88%) Strand = Plus / Plus Query: 867 aattggttaatgtttgaattgctatggagagatttcttcaggt 909 |||||||| |||||||| ||||||||||| || ||||| |||| Sbjct: 11713 aattggttgatgtttgagttgctatggagggacttctttaggt 11755
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.076 Identities = 42/48 (87%) Strand = Plus / Minus Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 |||||||||| | ||||||||||| |||||||| ||| ||||||||| Sbjct: 31814159 cccgtggtacagtcccgaccgcgtcatctacctccgcctgctctccgg 31814112
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 48.1 bits (24), Expect = 0.076 Identities = 42/48 (87%) Strand = Plus / Minus Query: 196 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 243 |||||||||| | ||||||||||| |||||||| ||| ||||||||| Sbjct: 109957 cccgtggtacagtcccgaccgcgtcatctacctccgcctgctctccgg 109910
>emb|BX819264.1|CNS0A8SM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1537 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 870 tggttaatgtttgaattgctatggagagatttcttc 905 |||||||||| ||| ||||||||||| ||||||||| Sbjct: 1230 tggttaatgtatgagttgctatggagggatttcttc 1265
>gb|AC128239.4| Rattus norvegicus 4 BAC CH230-514E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 187607 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1011 gccaagcagagagtctgctgctg 1033 ||||||||||||||||||||||| Sbjct: 107892 gccaagcagagagtctgctgctg 107870
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 46.1 bits (23), Expect = 0.30 Identities = 50/59 (84%) Strand = Plus / Plus Query: 186 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc 244 ||||| ||||||| |||||||| ||||||||||| ||||| |||||| |||||||| Sbjct: 528 cctccggcagcccctggtacgggcccgaccgcgtcaagtacctaggcccgttctccggc 586
>ref|NM_060412.2| Caenorhabditis elegans B0205.5 (B0205.5) mRNA, complete cds Length = 141 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 532 ccacgcttggtgagcttggact 553 |||||||||||||||||||||| Sbjct: 53 ccacgcttggtgagcttggact 32
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 cgcagcagcagccgcacatcag 42 |||||||||||||||||||||| Sbjct: 16528152 cgcagcagcagccgcacatcag 16528131
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 agaaggaaggcgtcgaggttaagtac 353 ||||||||||||||||||| |||||| Sbjct: 1583709 agaaggaaggcgtcgaggtgaagtac 1583734
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 agaaggaaggcgtcgaggttaagtac 353 ||||||||||||||||||| |||||| Sbjct: 4419001 agaaggaaggcgtcgaggtgaagtac 4418976
>ref|NM_165165.1| Drosophila melanogaster CG5953-RB, transcript variant B (CG5953), mRNA Length = 3796 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cgcagcagcagccgcacatcag 42 |||||||||||||||||||||| Sbjct: 707 cgcagcagcagccgcacatcag 728
>ref|NM_135952.1| Drosophila melanogaster CG5953-RA, transcript variant A (CG5953), mRNA Length = 3534 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cgcagcagcagccgcacatcag 42 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 cgccggagcctcgtacgtcctcggcg 143 |||||||||| ||||||||||||||| Sbjct: 3741869 cgccggagccgcgtacgtcctcggcg 3741894
>gb|BT023765.1| Drosophila melanogaster RE18252 full insert cDNA Length = 3550 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cgcagcagcagccgcacatcag 42 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 agaaggaaggcgtcgaggttaagtac 353 ||||||||||||||||||| |||||| Sbjct: 1626432 agaaggaaggcgtcgaggtgaagtac 1626457
>emb|AL136460.28| Human DNA sequence from clone RP11-102J14 on chromosome 20 Contains a novel gene and the PA2G4P2 gene for proliferation-associated 2G4 pseudogene 2, complete sequence Length = 139030 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 726 tcctgcaaaatttctccatggc 747 |||||||||||||||||||||| Sbjct: 88963 tcctgcaaaatttctccatggc 88984
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 agaaggaaggcgtcgaggttaagtac 353 ||||||||||||||||||| |||||| Sbjct: 186710 agaaggaaggcgtcgaggtgaagtac 186685
>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone BACR44N04, complete sequence Length = 190651 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 cgcagcagcagccgcacatcag 42 |||||||||||||||||||||| Sbjct: 70485 cgcagcagcagccgcacatcag 70464
>gb|AF067211.2| Caenorhabditis elegans cosmid B0205, complete sequence Length = 40951 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 532 ccacgcttggtgagcttggact 553 |||||||||||||||||||||| Sbjct: 34375 ccacgcttggtgagcttggact 34354
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 cggcggccgcatcaccatgcgc 163 |||||||||||||||||||||| Sbjct: 123 cggcggccgcatcaccatgcgc 144
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 cgccggagcctcgtacgtcctcggcg 143 |||||||||| ||||||||||||||| Sbjct: 3726293 cgccggagccgcgtacgtcctcggcg 3726318
>gb|DQ246091.1| Zea mays clone 15735 mRNA sequence Length = 1072 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 132 acgtcctcggcggcggccgcatcaccatgcgcaagac 168 ||||| |||||| || |||||||||||||||||||| Sbjct: 140 acgtcttcggcgaggggcgcatcaccatgcgcaagac 176
>ref|XM_001188934.1| PREDICTED: Strongylocentrotus purpuratus similar to centrosome-associated protein 350 (LOC577510), mRNA Length = 10509 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 atgtgcttgagcctggtgacatccc 532 |||| |||||||||||||||||||| Sbjct: 3955 atgtccttgagcctggtgacatccc 3931
>ref|XM_777733.2| PREDICTED: Strongylocentrotus purpuratus similar to centrosome-associated protein 350 (LOC577510), mRNA Length = 10509 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 atgtgcttgagcctggtgacatccc 532 |||| |||||||||||||||||||| Sbjct: 3955 atgtccttgagcctggtgacatccc 3931
>gb|DQ423047.2| Coffea canephora cultivar BP409 Length = 568 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 331 aggaaggcgtcgaggttaagtacttctggggcagcac 367 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 350 aggaaggagtggaggttaagtacttttggggaagcac 386
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 ccccgaccgcgtgctctacctcggc 232 ||||||||||||| ||||||||||| Sbjct: 436200 ccccgaccgcgtgatctacctcggc 436176
>gb|AC153360.6| Mus musculus BAC clone RP23-321I6 from chromosome 10, complete sequence Length = 233014 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 341 cgaggttaagtacttctggggcagc 365 |||||||||| |||||||||||||| Sbjct: 221944 cgaggttaagcacttctggggcagc 221968
>gb|BT013885.1| Lycopersicon esculentum clone 132866F, mRNA sequence Length = 1649 Score = 42.1 bits (21), Expect = 4.7 Identities = 75/93 (80%) Strand = Plus / Plus Query: 705 agcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttgtctc 764 |||||||||||||| || || || |||||||| || || ||| | |||| || |||||| Sbjct: 1230 agcatatatggtgcaaacttttcttgcaaaatatcgccttggttagctatgggatgtctc 1289 Query: 765 tctccacgtttcatgtatgaggagttgaagaag 797 || || |||| ||||| ||| || ||||||||| Sbjct: 1290 tcaccccgttccatgtttgatgaattgaagaag 1322
>gb|AC132290.3| Mus musculus BAC clone RP24-318H2 from chromosome 10, complete sequence Length = 152306 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 341 cgaggttaagtacttctggggcagc 365 |||||||||| |||||||||||||| Sbjct: 45819 cgaggttaagcacttctggggcagc 45843
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 754 ctggttgtctctctccacgtt 774 ||||||||||||||||||||| Sbjct: 179521 ctggttgtctctctccacgtt 179541
>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence Length = 255667 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 341 cgaggttaagtacttctggggcagc 365 |||||||||| |||||||||||||| Sbjct: 16479 cgaggttaagcacttctggggcagc 16503
>gb|AE011818.1| Xanthomonas axonopodis pv. citri str. 306, section 196 of 469 of the complete genome Length = 11244 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 138 tcggcggcggccgcatcaccatgcgcaag 166 |||||||||||||||||||| ||||||| Sbjct: 3700 tcggcggcggccgcatcaccgcgcgcaag 3672
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 754 ctggttgtctctctccacgtt 774 ||||||||||||||||||||| Sbjct: 108204 ctggttgtctctctccacgtt 108224
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 183 ccacctccagcagcccgtggtacggccccgaccgcgt 219 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 16289621 ccacctctggcagcccgtggtacggacccaaccgcgt 16289585
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 186 cctccagcagcccgtggtacggccccgac 214 ||||| ||||||| ||||||||||||||| Sbjct: 42 cctccggcagcccctggtacggccccgac 70
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 ctctcctcccccgcgatgaagctcg 119 ||||||||||||| ||||||||||| Sbjct: 38496 ctctcctcccccgggatgaagctcg 38472
>gb|AC022092.8| Homo sapiens chromosome 5 clone CTB-138E5, complete sequence Length = 102444 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 aagcagaagccctggaaaggc 639 ||||||||||||||||||||| Sbjct: 56248 aagcagaagccctggaaaggc 56228
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 183 ccacctccagcagcccgtggtacggccccgaccgcgt 219 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 114513 ccacctctggcagcccgtggtacggacccaaccgcgt 114477
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 cctcggcggcggccgcatcac 156 ||||||||||||||||||||| Sbjct: 4204589 cctcggcggcggccgcatcac 4204609 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 219,781,318 Number of extensions: 11781383 Number of successful extensions: 228403 Number of sequences better than 10.0: 116 Number of HSP's gapped: 228389 Number of HSP's successfully gapped: 143 Length of query: 1239 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1216 Effective length of database: 18,503,978,556 Effective search space: 22500837924096 Effective search space used: 22500837924096 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
