ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94j20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099298:Os04g0691600 | 179 | 2e-45 | 2 | AK059422:Os04g0691600 | 179 | 2e-45 | 3 | AF095707:Os04g0691600 | 179 | 2e-45 | 4 | AK070753:Os08g0359600 | 57 | 2e-08 | 5 | AK120520:Os04g0502300 | 37 | 0.020 | 6 | AK121056:Os07g0565000 | 36 | 0.034 | 7 | Os07g0565100:Os07g0565100 | 29 | 3.2 | 8 | Os08g0526700:Os08g0526700 | 28 | 7.1 | 9 | AK065646:Os06g0609800 | 28 | 9.2 |
|---|
>AK099298:Os04g0691600 | Length = 145 Score = 179 bits (453), Expect = 2e-45 Identities = 91/111 (81%), Positives = 99/111 (89%) Frame = +2 Query: 146 VRIEAAKQLTGRVVTTKANKTVGVEVVRLKQHPKYHRREKIKKKYQAHDPDNQFKVGDVV 325 +RI+AAKQLTGRVVTTKA+KTVGVEVVRL HPKY RRE+IKKKYQAHDPDNQFKVGDVV Sbjct: 32 LRIQAAKQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVV 91 Query: 326 ELVRSRPISKTKHFLAVPVPPRDTRRKAQLLPPLESQSGQESAADETAT*P 478 EL RSRPISKTKHFLAVP+PPRDTRRK+QLLPPL+SQS Q D+ T P Sbjct: 92 ELRRSRPISKTKHFLAVPLPPRDTRRKSQLLPPLQSQS-QSQDQDQPPTPP 141
>AK059422:Os04g0691600 | Length = 145 Score = 179 bits (453), Expect = 2e-45 Identities = 91/111 (81%), Positives = 99/111 (89%) Frame = +2 Query: 146 VRIEAAKQLTGRVVTTKANKTVGVEVVRLKQHPKYHRREKIKKKYQAHDPDNQFKVGDVV 325 +RI+AAKQLTGRVVTTKA+KTVGVEVVRL HPKY RRE+IKKKYQAHDPDNQFKVGDVV Sbjct: 32 LRIQAAKQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVV 91 Query: 326 ELVRSRPISKTKHFLAVPVPPRDTRRKAQLLPPLESQSGQESAADETAT*P 478 EL RSRPISKTKHFLAVP+PPRDTRRK+QLLPPL+SQS Q D+ T P Sbjct: 92 ELRRSRPISKTKHFLAVPLPPRDTRRKSQLLPPLQSQS-QSQDQDQPPTPP 141
>AF095707:Os04g0691600 | Length = 145 Score = 179 bits (453), Expect = 2e-45 Identities = 91/111 (81%), Positives = 99/111 (89%) Frame = +2 Query: 146 VRIEAAKQLTGRVVTTKANKTVGVEVVRLKQHPKYHRREKIKKKYQAHDPDNQFKVGDVV 325 +RI+AAKQLTGRVVTTKA+KTVGVEVVRL HPKY RRE+IKKKYQAHDPDNQFKVGDVV Sbjct: 32 LRIQAAKQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVV 91 Query: 326 ELVRSRPISKTKHFLAVPVPPRDTRRKAQLLPPLESQSGQESAADETAT*P 478 EL RSRPISKTKHFLAVP+PPRDTRRK+QLLPPL+SQS Q D+ T P Sbjct: 92 ELRRSRPISKTKHFLAVPLPPRDTRRKSQLLPPLQSQS-QSQDQDQPPTPP 141
>AK070753:Os08g0359600 | Length = 107 Score = 56.6 bits (135), Expect = 2e-08 Identities = 30/73 (41%), Positives = 41/73 (56%) Frame = +2 Query: 164 KQLTGRVVTTKANKTVGVEVVRLKQHPKYHRREKIKKKYQAHDPDNQFKVGDVVELVRSR 343 K + G VV+ K K+V V V RL H Y+R K K+ AHD +GD V+L SR Sbjct: 2 KPVVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDETEDCNIGDRVKLDPSR 61 Query: 344 PISKTKHFLAVPV 382 P+SK KH++ + Sbjct: 62 PLSKRKHWVVAEI 74
>AK120520:Os04g0502300 | Length = 160 Score = 36.6 bits (83), Expect = 0.020 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +2 Query: 170 LTGRVVTTKANKTVGVEVVRLKQHPKYHRREKIKKKYQAH-DPDNQFKVGDVVELVRSRP 346 + G + K N+T+ V L KY R EK AH P + K GD V + + RP Sbjct: 72 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 131 Query: 347 ISKTKHFLAVPVPPRDTRRKA 409 +SKT F + V P ++ A Sbjct: 132 LSKTVRFNVLKVIPAGSKSGA 152
>AK121056:Os07g0565000 | Length = 161 Score = 35.8 bits (81), Expect = 0.034 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +2 Query: 170 LTGRVVTTKANKTVGVEVVRLKQHPKYHRREKIKKKYQAH-DPDNQFKVGDVVELVRSRP 346 + G + K N+T+ V L KY R EK AH P + K GD V + + RP Sbjct: 72 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRP 131 Query: 347 ISKTKHFLAVPVPP 388 +SKT F + V P Sbjct: 132 LSKTVRFNVLKVIP 145
>Os07g0565100:Os07g0565100 | Length = 170 Score = 29.3 bits (64), Expect = 3.2 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Frame = +2 Query: 170 LTGRVVTTKANKTVGVEVVRLKQHPKYHRR---------EKIKKKYQAH-DPDNQFKVGD 319 + G + K N+T+ V L KY R+ EK AH P + K GD Sbjct: 72 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFRVKEGD 131 Query: 320 VVELVRSRPISKTKHFLAVPVPP 388 V + + RP+SKT F + V P Sbjct: 132 HVIIGQCRPLSKTVRFNVLKVIP 154
>Os08g0526700:Os08g0526700 | Length = 488 Score = 28.1 bits (61), Expect = 7.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 423 RSSHSPDKNPPPTRPLPSLVMHPAFAFP 506 R++ SP PPP RP L + A AFP Sbjct: 35 RAAASPSSPPPPPRPPQGLRLGAAAAFP 62
>AK065646:Os06g0609800 | Length = 402 Score = 27.7 bits (60), Expect = 9.2 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = -3 Query: 690 SIKYSSTRLTFAAGRRKKIQISVPSGTDE*YRSSFSLRERRTTRAVIAEEKGRTIN*LTE 511 S++ S+++ F R S S TD+ +R SF R ++ RAV EK R N E Sbjct: 47 SLRKSTSQKDFLHSRDSSSSHS--SITDDEFRDSFHSRNQKGIRAVYTLEKDRLSNNEDE 104 Query: 510 N 508 N Sbjct: 105 N 105 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,149,719 Number of extensions: 243364 Number of successful extensions: 1134 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1129 Number of HSP's successfully gapped: 9 Length of query: 258 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 160 Effective length of database: 11,475,837 Effective search space: 1836133920 Effective search space used: 1836133920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
