ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91k03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0122300:Os01g0122300 | 28 | 1.8 | 2 | Os01g0343900:Os01g0343900 | 28 | 2.3 | 3 | Os06g0280500:Os06g0280500 | 27 | 3.9 | 4 | AK067297:Os01g0501700 | 27 | 3.9 | 5 | AK101000:Os07g0124500 | 27 | 5.2 | 6 | AK070529:Os07g0124500 | 27 | 5.2 | 7 | Os02g0123300:Os02g0123300 | 27 | 6.7 | 8 | AK109988: | 27 | 6.7 | 9 | AK100131:Os05g0583500 | 27 | 6.7 | 10 | AK069464:Os06g0164000 | 27 | 6.7 | 11 | AK059334:Os05g0583500 | 27 | 6.7 | 12 | AK102886:Os02g0288200 | 26 | 8.8 | 13 | AK099258:Os04g0479200 | 26 | 8.8 | 14 | AK072524:Os04g0479200 | 26 | 8.8 | 15 | AK072240:Os04g0479200 | 26 | 8.8 |
|---|
>Os01g0122300:Os01g0122300 | Length = 305 Score = 28.5 bits (62), Expect = 1.8 Identities = 19/78 (24%), Positives = 27/78 (34%) Frame = -2 Query: 310 PGAIAWPAPSHEQRSFLPANQRSAGTPQPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATR 131 P W S RS P + +AG P T + A TR Sbjct: 101 PALAPWRPSSRRPRSSAPTRRTAAGATSPTTPS-----------------TTTSARARTR 143 Query: 130 SPRKLKPASSSDSLLQHI 77 PA++S +LL+H+ Sbjct: 144 RAHARSPAAASPALLEHL 161
>Os01g0343900:Os01g0343900 | Length = 697 Score = 28.1 bits (61), Expect = 2.3 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -2 Query: 292 PAPSHEQRSFLPANQRSAGTPQPLPQQH 209 P PSH Q+ LPA Q +P QQH Sbjct: 412 PPPSHSQQPALPAPQPVQASPTSPAQQH 439
>Os06g0280500:Os06g0280500 | Length = 1168 Score = 27.3 bits (59), Expect = 3.9 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = -2 Query: 310 PGAIAWPAPSHEQRSFLPANQRSAGTPQPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATR 131 P + P P H +R +PA R + Q + ++ +R G R+ M AT Sbjct: 191 PSPLPSPPPGHRRRQVVPAVARVTYSVQMVVRRR-----SKRKAGRNRTEQEVEMDTATS 245 Query: 130 SPRKLKPASSS 98 +P + + ++S+ Sbjct: 246 APERTETSTSA 256
>AK067297:Os01g0501700 | Length = 359 Score = 27.3 bits (59), Expect = 3.9 Identities = 17/72 (23%), Positives = 28/72 (38%) Frame = -2 Query: 292 PAPSHEQRSFLPANQRSAGTPQPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATRSPRKLK 113 P+P QR P+ A P PQ V + FGG+ +++ ++L Sbjct: 69 PSPPAPQREESPSGSLGAALEDPSPQP----VQNGSFGGITEDEEQSSLYNFLYPSKELL 124 Query: 112 PASSSDSLLQHI 77 P S+ H+ Sbjct: 125 PDDKEMSIFDHL 136
>AK101000:Os07g0124500 | Length = 936 Score = 26.9 bits (58), Expect = 5.2 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -1 Query: 398 YYTDKKHGLQFRRVLQFSSTVVIISEPEKTRSHCLACS 285 Y K FRR+L+ S + PE R H +A + Sbjct: 658 YDRRKSMNRTFRRLLEISERQTFVGPPENVRDHVMAAT 695
>AK070529:Os07g0124500 | Length = 936 Score = 26.9 bits (58), Expect = 5.2 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -1 Query: 398 YYTDKKHGLQFRRVLQFSSTVVIISEPEKTRSHCLACS 285 Y K FRR+L+ S + PE R H +A + Sbjct: 658 YDRRKSMNRTFRRLLEISERQTFVGPPENVRDHVMAAT 695
>Os02g0123300:Os02g0123300 | Length = 984 Score = 26.6 bits (57), Expect = 6.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -1 Query: 368 FRRVLQFSSTVVIISEPEKTRSHCLACS 285 FRR+L+ S + PE R H +A + Sbjct: 722 FRRLLEISERQTFVGPPENVRDHVMAAT 749
>AK109988: | Length = 775 Score = 26.6 bits (57), Expect = 6.7 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -2 Query: 310 PGAIAWPAPSHEQRSFLPANQRSAGTPQPLPQ 215 PG A P P + QR + PA Q QP Q Sbjct: 264 PGGYAPPQPWNPQRGYYPAQQHPPFLAQPQQQ 295
>AK100131:Os05g0583500 | Length = 1136 Score = 26.6 bits (57), Expect = 6.7 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = -2 Query: 187 RFGGVQRSMNTNAMTAATRSPRKLKPASSSDSLLQHIFPM 68 RF Q + + TR P LKP SSS SL P+ Sbjct: 340 RFSQDQSKAAPDTQLSNTRHPSNLKPNSSSTSLTNSSHPL 379
>AK069464:Os06g0164000 | Length = 872 Score = 26.6 bits (57), Expect = 6.7 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Frame = -2 Query: 313 KPGAIAWP----APSHEQRSFLPANQRSAGTPQPL 221 +P A+ P AP Q FLPA R TP P+ Sbjct: 774 RPQAVPRPTISQAPPRAQSPFLPATARPPSTPPPI 808
>AK059334:Os05g0583500 | Length = 491 Score = 26.6 bits (57), Expect = 6.7 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = -2 Query: 187 RFGGVQRSMNTNAMTAATRSPRKLKPASSSDSLLQHIFPM 68 RF Q + + TR P LKP SSS SL P+ Sbjct: 233 RFSQDQSKAAPDTQLSNTRHPSNLKPNSSSTSLTNSSHPL 272
>AK102886:Os02g0288200 | Length = 578 Score = 26.2 bits (56), Expect = 8.8 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 316 RKPGAIAWPAPSHEQRSFLPANQRSAGTPQPLP 218 +K A PAPS + + P SA P+P P Sbjct: 121 KKKRAAPEPAPSGKAKKAKPEKSSSAAAPEPAP 153
>AK099258:Os04g0479200 | Length = 409 Score = 26.2 bits (56), Expect = 8.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 292 PAPSHEQRSFLPANQRSAGTPQPLPQQHG 206 P P+H +RS P +R +P P P HG Sbjct: 33 PPPTHGRRS-APLLRRILSSPAPAPAHHG 60
>AK072524:Os04g0479200 | Length = 415 Score = 26.2 bits (56), Expect = 8.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 292 PAPSHEQRSFLPANQRSAGTPQPLPQQHG 206 P P+H +RS P +R +P P P HG Sbjct: 39 PPPTHGRRS-APLLRRILSSPAPAPAHHG 66
>AK072240:Os04g0479200 | Length = 409 Score = 26.2 bits (56), Expect = 8.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 292 PAPSHEQRSFLPANQRSAGTPQPLPQQHG 206 P P+H +RS P +R +P P P HG Sbjct: 33 PPPTHGRRS-APLLRRILSSPAPAPAHHG 60 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,408,906 Number of extensions: 257894 Number of successful extensions: 712 Number of sequences better than 10.0: 15 Number of HSP's gapped: 712 Number of HSP's successfully gapped: 15 Length of query: 141 Length of database: 15,399,855 Length adjustment: 90 Effective length of query: 51 Effective length of database: 11,796,165 Effective search space: 601604415 Effective search space used: 601604415 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
