Clone Name | FLbaf91k03 |
---|---|
Clone Library Name | barley_pub |
>O70279:DGC14_MOUSE Protein DGCR14 - Mus musculus (Mouse)| Length = 479 Score = 32.7 bits (73), Expect = 0.44 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = -2 Query: 247 RSAGTPQPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATRSPRKLKPASSSDSLLQ 83 R++ TP P H GG Q +T A +ATR+P PAS +D+LLQ Sbjct: 418 RASYTPSPARSSH----LKTPAGGPQTPTSTPAPGSATRTPLTQDPASITDNLLQ 468
>Q96DF8:DGC14_HUMAN Protein DGCR14 - Homo sapiens (Human)| Length = 476 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -2 Query: 247 RSAGTPQPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATRSPRKLKPASSSDSLLQ 83 R++ TP P H G+Q +T A +ATR+P PAS +D+LLQ Sbjct: 415 RASYTPSPARSTH----LKTPASGLQTPTSTPAPGSATRTPLTQDPASITDNLLQ 465
>Q07564:ECPC_EIKCO Fimbrial protein ecpC precursor - Eikenella corrodens| Length = 153 Score = 30.4 bits (67), Expect = 2.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 Query: 307 GAIAWPAPSHEQRSFLPANQRSAGTPQPLP 218 G+ +W S+ +LP++ R+A TP P P Sbjct: 124 GSFSWECSSNADAKYLPSSCRNAATPTPTP 153
>Q9TSZ3:KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 - Canis| familiaris (Dog) Length = 1158 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = -2 Query: 301 IAWPAPSHEQRSFLPANQRSAGTPQPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATRSPR 122 +A P EQR+ + ++ AG P+PLP + G S + A T + S Sbjct: 222 VAGLGPMEEQRALVGSSSPPAGAPEPLPSPRAHSLNPDASG----SSCSLARTRSRESCA 277 Query: 121 KLKPASSSDSL 89 ++ ASS+D + Sbjct: 278 SVRRASSADDI 288
>P21525:FOSL_DROME Transcription factor kayak - Drosophila melanogaster (Fruit fly)| Length = 722 Score = 30.0 bits (66), Expect = 2.9 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -2 Query: 259 PANQRSAGTP-QPLPQQHG*MVTDRRFGGVQRSMNTNAMTAATRSPRKLKPASSSDSLLQ 83 PA SAG+ H D G + T T + SP LKPA++ DSLL Sbjct: 471 PAGLLSAGSSGSGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKPAANIDSLLM 530 Query: 82 HI 77 HI Sbjct: 531 HI 532
>P06592:PHYA_CUCPE Phytochrome A - Cucurbita pepo (Vegetable marrow) (Summer squash)| Length = 1124 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -1 Query: 191 SPLRWGAEEHEH-QRDDGRDEEPQ 123 S +RWG +HEH Q+DD R P+ Sbjct: 526 SEIRWGGAKHEHGQKDDARKMHPR 549 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 67,090,833 Number of extensions: 1365163 Number of successful extensions: 3076 Number of sequences better than 10.0: 6 Number of HSP's gapped: 3074 Number of HSP's successfully gapped: 6 Length of query: 141 Length of database: 100,686,439 Length adjustment: 102 Effective length of query: 39 Effective length of database: 72,708,349 Effective search space: 2835625611 Effective search space used: 2835625611 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)