ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91k01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062477:Os02g0581200 | 72 | 4e-13 | 2 | AK107738:Os04g0466000 | 63 | 2e-10 | 3 | AK122096:Os02g0450000 | 34 | 0.11 | 4 | AK106956:Os02g0450000 | 34 | 0.11 | 5 | AK108858:Os01g0288800 | 33 | 0.14 | 6 | AK064933:Os01g0778700 | 30 | 2.0 | 7 | AK064215:Os06g0546000 | 26 | 2.3 | 8 | AK069492:Os03g0399000 | 28 | 5.9 | 9 | Os03g0648200:Os03g0648200 | 28 | 7.7 | 10 | AK119719:Os09g0541000 | 28 | 7.7 | 11 | AK109439:Os09g0541000 | 28 | 7.7 | 12 | AK107859:Os02g0517700 | 28 | 7.7 | 13 | AK104786:Os09g0541000 | 28 | 7.7 | 14 | AK102148:Os02g0517700 | 28 | 7.7 | 15 | AK067792:Os09g0541000 | 28 | 7.7 |
|---|
>AK062477:Os02g0581200 | Length = 80 Score = 72.0 bits (175), Expect = 4e-13 Identities = 37/50 (74%), Positives = 40/50 (80%), Gaps = 1/50 (2%) Frame = +2 Query: 218 DDGYMSDWEGRPRCGSKVRSSDEDSG-WWVGERDVDRKAADYINDFHQKK 364 DDG +S E R GSKVRSSDED G WWVGERDVDRKA+DYIN FHQ+K Sbjct: 27 DDGELSG-EWPARYGSKVRSSDEDYGAWWVGERDVDRKASDYINSFHQRK 75
>AK107738:Os04g0466000 | Length = 78 Score = 62.8 bits (151), Expect = 2e-10 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 2/49 (4%) Frame = +2 Query: 230 MSDWEGRPRCGS--KVRSSDEDSGWWVGERDVDRKAADYINDFHQKKVS 370 +SDWE RP KVRSSDED+GWW+GERDVD+KA+D+I FH + S Sbjct: 28 VSDWE-RPAATRLRKVRSSDEDNGWWIGERDVDQKASDFIARFHHHQTS 75
>AK122096:Os02g0450000 | Length = 810 Score = 33.9 bits (76), Expect = 0.11 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = -2 Query: 594 PSTPSTHTHDRHEH--RDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCP 445 P P +H H H R H +Y++ P++ H H ++ T+ P P Sbjct: 163 PQQPQSHHHHHHHSGSRKRHSMPPAYTAAEPVSHHHHLVVVDPSTVYSPPLP 214
>AK106956:Os02g0450000 | Length = 661 Score = 33.9 bits (76), Expect = 0.11 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = -2 Query: 594 PSTPSTHTHDRHEH--RDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCP 445 P P +H H H R H +Y++ P++ H H ++ T+ P P Sbjct: 14 PQQPQSHHHHHHHSGSRKRHSMPPAYTAAEPVSHHHHLVVVDPSTVYSPPLP 65
>AK108858:Os01g0288800 | Length = 96 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +2 Query: 251 PRCGSKVRSSDEDSGWWVGERDVDRKAADYINDFHQ 358 P +V SDED+ + ERD+DR+A+++I+ H+ Sbjct: 50 PERRRRVWPSDEDNDNYYAERDIDRRASEFIDKVHR 85
>AK064933:Os01g0778700 | Length = 438 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 538 AKQKLFVRPSSKSTHTCMHDNKWNHSRTFVSWIPGTWL 425 AK K P+S ++ + M D +WN S T V W WL Sbjct: 361 AKDKYLSTPTSATSSSKMEDTQWNFSFTLV-WNTVVWL 397
>AK064215:Os06g0546000 | Length = 222 Score = 25.8 bits (55), Expect(2) = 2.3 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -3 Query: 620 YICDASLS-SPPPQARTHTIDTNTEIYICQAKVI 522 Y C +SLS SPPP++++ ++ +C A+ + Sbjct: 43 YACSSSLSASPPPKSQSEYATMSSSNLMCSARYL 76 Score = 22.3 bits (46), Expect(2) = 2.3 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -1 Query: 478 NKWNHSRTFVSWIPGTWLHAWR 413 ++W SR WI GT L AW+ Sbjct: 109 SRWT-SREPARWISGTNLSAWK 129
>AK069492:Os03g0399000 | Length = 603 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -2 Query: 570 HDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSG 469 HD H D HL +S VPP M+TSG Sbjct: 235 HDIQHHVDRHLEDQSLPPVPPWLSDEDRRMLTSG 268
>Os03g0648200:Os03g0648200 | Length = 1064 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -1 Query: 538 AKQKLFVRPSSKSTHTCMHDNKWNHSRTFVSWIPGTWLHAWRA 410 ++ K FV + HTC + W R W+ G ++ A+RA Sbjct: 393 SRAKAFVVKTCDERHTCQKE--WILKRCTSKWLAGKYIEAFRA 433
>AK119719:Os09g0541000 | Length = 257 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 Query: 517 GRITFAWQM*ISVFVSIVCVRAWGGGDDRDASQMYLLFAAKLS 645 G + AW ++FV + C GG A + L F KLS Sbjct: 81 GYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLS 123
>AK109439:Os09g0541000 | Length = 290 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 Query: 517 GRITFAWQM*ISVFVSIVCVRAWGGGDDRDASQMYLLFAAKLS 645 G + AW ++FV + C GG A + L F KLS Sbjct: 81 GYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLS 123
>AK107859:Os02g0517700 | Length = 187 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 314 DVDRKAADYINDFHQKKVSGRLAPPT*VPCMQRSP 418 DVD +A ++IN F+++ + PPT + C RSP Sbjct: 155 DVDYRAEEFINMFYEQLRAQSFHPPTVLQC--RSP 187
>AK104786:Os09g0541000 | Length = 290 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 Query: 517 GRITFAWQM*ISVFVSIVCVRAWGGGDDRDASQMYLLFAAKLS 645 G + AW ++FV + C GG A + L F KLS Sbjct: 81 GYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLS 123
>AK102148:Os02g0517700 | Length = 187 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 314 DVDRKAADYINDFHQKKVSGRLAPPT*VPCMQRSP 418 DVD +A ++IN F+++ + PPT + C RSP Sbjct: 155 DVDYRAEEFINMFYEQLRAQSFHPPTVLQC--RSP 187
>AK067792:Os09g0541000 | Length = 290 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 Query: 517 GRITFAWQM*ISVFVSIVCVRAWGGGDDRDASQMYLLFAAKLS 645 G + AW ++FV + C GG A + L F KLS Sbjct: 81 GYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLS 123 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,690,264 Number of extensions: 379263 Number of successful extensions: 1124 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1119 Number of HSP's successfully gapped: 16 Length of query: 230 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 133 Effective length of database: 11,515,878 Effective search space: 1531611774 Effective search space used: 1531611774 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
