ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf91k01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5G872:SCUB2_DANRE Signal peptide, CUB and EGF-like domain-conta... 34 0.46
2Q9QY06:MYO9B_MOUSE Myosin-IXb - Mus musculus (Mouse) 32 1.7
3P31264:HMPB_DROME Homeotic protein proboscipedia - Drosophila me... 31 3.9
4Q8IZF3:GP115_HUMAN Probable G-protein coupled receptor 115 precu... 31 3.9
5Q8VIG0:ZCH14_MOUSE Zinc finger CCHC domain-containing protein 14... 31 5.1
6Q80T03:MUC6_MOUSE Mucin-6 precursor - Mus musculus (Mouse) 30 8.7
7Q8LK56:DME_ARATH Transcriptional activator DEMETER - Arabidopsis... 30 8.7

>Q5G872:SCUB2_DANRE Signal peptide, CUB and EGF-like domain-containing protein 2|
           precursor - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 1010
 Score = 34.3 bits (77), Expect = 0.46
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 417 HACNHVPGIQDTKVLEWFHLLSCMHVCVDLEEGRTNN 527
           H CN++PG      L+ FHL    H C+D++E   NN
Sbjct: 83  HECNNIPGNYRCTCLDGFHLAHDGHNCLDVDECVFNN 119



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>Q9QY06:MYO9B_MOUSE Myosin-IXb - Mus musculus (Mouse)|
          Length = 2114

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
 Frame = -2

Query: 504  NQHTHACMITSGTIQEPSCPGSLVHGCMHGERCMHGT*VGGARRPETFFWWKSLM*SAAL 325
            N+H  +C   S T +EPS   SL      GE    GT   G R      W ++   S++ 
Sbjct: 1154 NKHIQSCREESSTHREPSRRASL----EIGESFPEGT--KGPREDGLEAWTETTAPSSSK 1207

Query: 324  RST-------SRSPTHQPESSSLDRTLLPHLGRPSQSLM*PSSYLELELDLDRKLNIGQK 166
            ++        S SP  +P + +LD  + P L         PSS LE   D D+  +  + 
Sbjct: 1208 QAQVVGDPPGSPSPVQRPTTLALDSRVSPML---------PSSSLESPKDKDKDESSTKA 1258

Query: 165  KEKDDFP 145
            ++K + P
Sbjct: 1259 QDKPESP 1265



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>P31264:HMPB_DROME Homeotic protein proboscipedia - Drosophila melanogaster (Fruit|
           fly)
          Length = 782

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -2

Query: 594 PSTPSTHTHDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCPGSLVHG 427
           P  P+TH H  H H  + +P+++++   P++ H ++  I  G    P  P S +HG
Sbjct: 677 PPIPATHGHGHHPHH-VQVPAQAHA---PIHAHHNSAAIPGGVGVGP--PPSHIHG 726



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>Q8IZF3:GP115_HUMAN Probable G-protein coupled receptor 115 precursor - Homo sapiens|
           (Human)
          Length = 695

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 326 KAADYINDFHQKKVSGRLAPPT*VPCMQRSPCMQPCTRD 442
           KA D +     K  +GR+      PC+  S C QPC +D
Sbjct: 31  KAGDKLQSPEGKPKTGRIQEKCEGPCISSSNCSQPCAKD 69



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>Q8VIG0:ZCH14_MOUSE Zinc finger CCHC domain-containing protein 14 - Mus musculus|
           (Mouse)
          Length = 956

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 27/113 (23%), Positives = 44/113 (38%)
 Frame = -2

Query: 621 IHL*RIPVIPSTPSTHTHDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCPG 442
           +H+ R P+     S+   D         P+    SVPP   +    + T+ T    S   
Sbjct: 637 LHVARPPIKLLLASSVPADAAIAGQTSCPNNGQISVPPAIMNPRTALYTANTKVAFSAVS 696

Query: 441 SLVHGCMHGERCMHGT*VGGARRPETFFWWKSLM*SAALRSTSRSPTHQPESS 283
           S+  G + G  C +      +  P T F   + + S    S+S + +  PESS
Sbjct: 697 SVPVGPLQGSFCANSNTASPSSHPSTSFASMASLPSCPAPSSSPALSSVPESS 749



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>Q80T03:MUC6_MOUSE Mucin-6 precursor - Mus musculus (Mouse)|
          Length = 2850

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
 Frame = -2

Query: 597  IPSTPSTHTHDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCPGSL-VHGCM 421
            +PS  S HT           P  S S+  PL         T G +  P+ P SL V    
Sbjct: 1789 LPSGTSVHTTTNFPTHSG--PQSSLSTHLPLFSTLSVTPTTEG-LNTPTSPHSLSVASTS 1845

Query: 420  HGERCMHGT*VGGARRPETFFWWKSLM*SAALRSTSRSPTHQPESSSLDRTLLPHLGRPS 241
                 +  T + G R P T         S  +  T+ + T    S S DRT  PHL +PS
Sbjct: 1846 MPLMTVLPTTLEGTRPPHT---------SVPVTYTTTAATQTKSSFSTDRTSAPHLSQPS 1896



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>Q8LK56:DME_ARATH Transcriptional activator DEMETER - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 1987

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
 Frame = -2

Query: 333  AALRSTSRSPTHQPESSSLDRTLLPHLGRPSQSLM*PSSY-------LELELDLDRKLNI 175
            A+  +++R     PE  SL    +P         + P SY       +EL L L++ L  
Sbjct: 1649 ASAYASARLALPAPEERSLTSATIP---------VPPESYPPVAIPMIELPLPLEKSLAS 1699

Query: 174  GQKKEKDDFPPILLPTSTPGSACCLLRET 88
            G    +++  PI+   ++PG  C  + E+
Sbjct: 1700 GAPSNRENCEPIIEEPASPGQECTEITES 1728


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 102,777,001
Number of extensions: 2077808
Number of successful extensions: 5384
Number of sequences better than 10.0: 7
Number of HSP's gapped: 5381
Number of HSP's successfully gapped: 7
Length of query: 230
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 121
Effective length of database: 70,788,284
Effective search space: 8565382364
Effective search space used: 8565382364
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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