Clone Name | FLbaf91k01 |
---|---|
Clone Library Name | barley_pub |
>Q5G872:SCUB2_DANRE Signal peptide, CUB and EGF-like domain-containing protein 2| precursor - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 1010 Score = 34.3 bits (77), Expect = 0.46 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 417 HACNHVPGIQDTKVLEWFHLLSCMHVCVDLEEGRTNN 527 H CN++PG L+ FHL H C+D++E NN Sbjct: 83 HECNNIPGNYRCTCLDGFHLAHDGHNCLDVDECVFNN 119
>Q9QY06:MYO9B_MOUSE Myosin-IXb - Mus musculus (Mouse)| Length = 2114 Score = 32.3 bits (72), Expect = 1.7 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 7/127 (5%) Frame = -2 Query: 504 NQHTHACMITSGTIQEPSCPGSLVHGCMHGERCMHGT*VGGARRPETFFWWKSLM*SAAL 325 N+H +C S T +EPS SL GE GT G R W ++ S++ Sbjct: 1154 NKHIQSCREESSTHREPSRRASL----EIGESFPEGT--KGPREDGLEAWTETTAPSSSK 1207 Query: 324 RST-------SRSPTHQPESSSLDRTLLPHLGRPSQSLM*PSSYLELELDLDRKLNIGQK 166 ++ S SP +P + +LD + P L PSS LE D D+ + + Sbjct: 1208 QAQVVGDPPGSPSPVQRPTTLALDSRVSPML---------PSSSLESPKDKDKDESSTKA 1258 Query: 165 KEKDDFP 145 ++K + P Sbjct: 1259 QDKPESP 1265
>P31264:HMPB_DROME Homeotic protein proboscipedia - Drosophila melanogaster (Fruit| fly) Length = 782 Score = 31.2 bits (69), Expect = 3.9 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = -2 Query: 594 PSTPSTHTHDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCPGSLVHG 427 P P+TH H H H + +P+++++ P++ H ++ I G P P S +HG Sbjct: 677 PPIPATHGHGHHPHH-VQVPAQAHA---PIHAHHNSAAIPGGVGVGP--PPSHIHG 726
>Q8IZF3:GP115_HUMAN Probable G-protein coupled receptor 115 precursor - Homo sapiens| (Human) Length = 695 Score = 31.2 bits (69), Expect = 3.9 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +2 Query: 326 KAADYINDFHQKKVSGRLAPPT*VPCMQRSPCMQPCTRD 442 KA D + K +GR+ PC+ S C QPC +D Sbjct: 31 KAGDKLQSPEGKPKTGRIQEKCEGPCISSSNCSQPCAKD 69
>Q8VIG0:ZCH14_MOUSE Zinc finger CCHC domain-containing protein 14 - Mus musculus| (Mouse) Length = 956 Score = 30.8 bits (68), Expect = 5.1 Identities = 27/113 (23%), Positives = 44/113 (38%) Frame = -2 Query: 621 IHL*RIPVIPSTPSTHTHDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCPG 442 +H+ R P+ S+ D P+ SVPP + + T+ T S Sbjct: 637 LHVARPPIKLLLASSVPADAAIAGQTSCPNNGQISVPPAIMNPRTALYTANTKVAFSAVS 696 Query: 441 SLVHGCMHGERCMHGT*VGGARRPETFFWWKSLM*SAALRSTSRSPTHQPESS 283 S+ G + G C + + P T F + + S S+S + + PESS Sbjct: 697 SVPVGPLQGSFCANSNTASPSSHPSTSFASMASLPSCPAPSSSPALSSVPESS 749
>Q80T03:MUC6_MOUSE Mucin-6 precursor - Mus musculus (Mouse)| Length = 2850 Score = 30.0 bits (66), Expect = 8.7 Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 1/120 (0%) Frame = -2 Query: 597 IPSTPSTHTHDRHEHRDLHLPSKSYSSVPPLNQHTHACMITSGTIQEPSCPGSL-VHGCM 421 +PS S HT P S S+ PL T G + P+ P SL V Sbjct: 1789 LPSGTSVHTTTNFPTHSG--PQSSLSTHLPLFSTLSVTPTTEG-LNTPTSPHSLSVASTS 1845 Query: 420 HGERCMHGT*VGGARRPETFFWWKSLM*SAALRSTSRSPTHQPESSSLDRTLLPHLGRPS 241 + T + G R P T S + T+ + T S S DRT PHL +PS Sbjct: 1846 MPLMTVLPTTLEGTRPPHT---------SVPVTYTTTAATQTKSSFSTDRTSAPHLSQPS 1896
>Q8LK56:DME_ARATH Transcriptional activator DEMETER - Arabidopsis thaliana (Mouse-ear| cress) Length = 1987 Score = 30.0 bits (66), Expect = 8.7 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Frame = -2 Query: 333 AALRSTSRSPTHQPESSSLDRTLLPHLGRPSQSLM*PSSY-------LELELDLDRKLNI 175 A+ +++R PE SL +P + P SY +EL L L++ L Sbjct: 1649 ASAYASARLALPAPEERSLTSATIP---------VPPESYPPVAIPMIELPLPLEKSLAS 1699 Query: 174 GQKKEKDDFPPILLPTSTPGSACCLLRET 88 G +++ PI+ ++PG C + E+ Sbjct: 1700 GAPSNRENCEPIIEEPASPGQECTEITES 1728 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 102,777,001 Number of extensions: 2077808 Number of successful extensions: 5384 Number of sequences better than 10.0: 7 Number of HSP's gapped: 5381 Number of HSP's successfully gapped: 7 Length of query: 230 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 121 Effective length of database: 70,788,284 Effective search space: 8565382364 Effective search space used: 8565382364 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)