ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf88p05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK058848:Os04g0414700 | 241 | 5e-64 | 2 | AK106286:Os04g0449300 | 33 | 0.16 | 3 | Os05g0188700:Os05g0188700 | 29 | 3.9 | 4 | Os05g0114500:Os05g0114500 | 28 | 6.6 | 5 | M24287:Os08g0473900 | 28 | 6.6 | 6 | AK119761:Os08g0473900 | 28 | 6.6 | 7 | AK119561:Os08g0473900 | 28 | 6.6 | 8 | AK106236:Os07g0520200 | 28 | 6.6 | 9 | AK073487:Os08g0473900 | 28 | 6.6 | 10 | AK120560:Os02g0229400 | 28 | 8.6 | 11 | AK099716:Os02g0229400 | 28 | 8.6 |
|---|
>AK058848:Os04g0414700 | Length = 142 Score = 241 bits (614), Expect = 5e-64 Identities = 110/125 (88%), Positives = 118/125 (94%) Frame = +3 Query: 174 PAFSTSFTSGGRVSARNPLMTRNLERNGRITCMTFPRDWLRRDLNVIGFGLIGWLAPSSI 353 PAFST FT+G RVSARNPL+TRNLERNGRITCMTFP+DWLRRDLNVIGFGLIGW+APSS+ Sbjct: 18 PAFSTGFTTGARVSARNPLLTRNLERNGRITCMTFPQDWLRRDLNVIGFGLIGWIAPSSV 77 Query: 354 PLINGNSLTGLFFSSIGEELAHFPSPPALQSQFWLWLVTWHLGLFIALTFGQIGFKGRTE 533 P INGNSLTGLFFSSIG+EL+HFPSPPAL S FWLWLVTWHLGLF+ALTFGQIGFKGRTE Sbjct: 78 PAINGNSLTGLFFSSIGQELSHFPSPPALDSPFWLWLVTWHLGLFLALTFGQIGFKGRTE 137 Query: 534 DYFQK 548 YF K Sbjct: 138 GYFDK 142
>AK106286:Os04g0449300 | Length = 406 Score = 33.5 bits (75), Expect = 0.16 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 16/96 (16%) Frame = -1 Query: 626 EHTCAEVAQHK*GRRTCMIQKLVNPLLLEV---------------VLGPALEP-DLAEGE 495 +H E QH G R ++Q L L ++V ++ L+P + + Sbjct: 47 DHHVGEAQQHHLGERLLVVQLLAGALPVQVRRLEHAHGLPARRAVLVVQVLDPLGVGAVQ 106 Query: 494 RDEQTQVPRHQPQPELRLESRGRGEVGELLADAGEE 387 R + ++ +P+ LRL S G GEVG LL AGE+ Sbjct: 107 RHHEHRLAPPRPRRRLRLVSGG-GEVGPLLRHAGED 141
>Os05g0188700:Os05g0188700 | Length = 440 Score = 28.9 bits (63), Expect = 3.9 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +2 Query: 338 GAVEHPADQRQQLDGALLLQHRRGARP-LPLAPGSPVAVLAVVGDVAPGSVHRA 496 GAV R GA +L H RGARP L LA P A AV+ G+ HRA Sbjct: 265 GAVPQQQAHRLHSGGARVLAHHRGARPELQLALRPPPA-HAVLPRRHRGAQHRA 317
>Os05g0114500:Os05g0114500 | Length = 548 Score = 28.1 bits (61), Expect = 6.6 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -1 Query: 503 EGERDEQTQVPRHQPQPELRLESRGRGEVGELLADAGEEE 384 E R+E+ +V + + + +E+ GEVGE A+ EEE Sbjct: 73 ELRREERRKVKKEKRRIRRLMETEAAGEVGEAAAEEEEEE 112
>M24287:Os08g0473900 | Length = 436 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/78 (23%), Positives = 32/78 (41%) Frame = +3 Query: 225 PLMTRNLERNGRITCMTFPRDWLRRDLNVIGFGLIGWLAPSSIPLINGNSLTGLFFSSIG 404 P MT + G + W RD N G+IGWL ++ ++ + + Sbjct: 263 PAMTFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWLPEKAVTFVDNHD------TGST 316 Query: 405 EELAHFPSPPALQSQFWL 458 ++L FPS +Q ++ Sbjct: 317 QKLWPFPSDKVMQGYAYI 334
>AK119761:Os08g0473900 | Length = 436 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/78 (23%), Positives = 32/78 (41%) Frame = +3 Query: 225 PLMTRNLERNGRITCMTFPRDWLRRDLNVIGFGLIGWLAPSSIPLINGNSLTGLFFSSIG 404 P MT + G + W RD N G+IGWL ++ ++ + + Sbjct: 263 PAMTFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWLPEKAVTFVDNHD------TGST 316 Query: 405 EELAHFPSPPALQSQFWL 458 ++L FPS +Q ++ Sbjct: 317 QKLWPFPSDKVMQGYAYI 334
>AK119561:Os08g0473900 | Length = 436 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/78 (23%), Positives = 32/78 (41%) Frame = +3 Query: 225 PLMTRNLERNGRITCMTFPRDWLRRDLNVIGFGLIGWLAPSSIPLINGNSLTGLFFSSIG 404 P MT + G + W RD N G+IGWL ++ ++ + + Sbjct: 263 PAMTFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWLPEKAVTFVDNHD------TGST 316 Query: 405 EELAHFPSPPALQSQFWL 458 ++L FPS +Q ++ Sbjct: 317 QKLWPFPSDKVMQGYAYI 334
>AK106236:Os07g0520200 | Length = 331 Score = 28.1 bits (61), Expect = 6.6 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 6/67 (8%) Frame = +2 Query: 338 GAVEHPADQ------RQQLDGALLLQHRRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAH 499 GA P Q RQQL QHR GA APG P +A V P V H Sbjct: 133 GAAREPEQQGGDDVERQQLHQR---QHRDGA-----APGPPPGEVAPDLAVDPAHVPPQH 184 Query: 500 LRPDRVQ 520 LRP ++ Sbjct: 185 LRPQELR 191
>AK073487:Os08g0473900 | Length = 476 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/78 (23%), Positives = 32/78 (41%) Frame = +3 Query: 225 PLMTRNLERNGRITCMTFPRDWLRRDLNVIGFGLIGWLAPSSIPLINGNSLTGLFFSSIG 404 P MT + G + W RD N G+IGWL ++ ++ + + Sbjct: 303 PAMTFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWLPEKAVTFVDNHD------TGST 356 Query: 405 EELAHFPSPPALQSQFWL 458 ++L FPS +Q ++ Sbjct: 357 QKLWPFPSDKVMQGYAYI 374
>AK120560:Os02g0229400 | Length = 746 Score = 27.7 bits (60), Expect = 8.6 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -1 Query: 542 EVVLGPALEP---DLAEGERDEQTQVPRHQPQPELRLESRGRGEVGELLA 402 E ++GPA+EP + +G++D+ T + Q + S+G +G +L+ Sbjct: 235 EYIIGPAIEPADEHVVDGDKDQITLYGPEEGQSWIARPSKGPSILGSVLS 284
>AK099716:Os02g0229400 | Length = 679 Score = 27.7 bits (60), Expect = 8.6 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -1 Query: 542 EVVLGPALEP---DLAEGERDEQTQVPRHQPQPELRLESRGRGEVGELLA 402 E ++GPA+EP + +G++D+ T + Q + S+G +G +L+ Sbjct: 168 EYIIGPAIEPADEHVVDGDKDQITLYGPEEGQSWIARPSKGPSILGSVLS 217 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,091,156 Number of extensions: 355316 Number of successful extensions: 1290 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1290 Number of HSP's successfully gapped: 11 Length of query: 247 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 149 Effective length of database: 11,475,837 Effective search space: 1709899713 Effective search space used: 1709899713 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
