ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK121702:Os07g0450000 165 3e-41
2AK063789:Os07g0450000 165 3e-41
3Os07g0523100:Os07g0523100 163 1e-40
4AK058924:Os07g0523300 160 7e-40
5D10406: 123 1e-28
6AK058830:Os07g0523300 79 3e-15
7AK069083: 56 2e-08
8AK121439:Os04g0530200 28 6.8
9AK105586:Os04g0530200 28 6.8
10AK119924:Os04g0211900 27 8.9 
>AK121702:Os07g0450000 |
          Length = 105
 Score =  165 bits (417), Expect = 3e-41
 Identities = 81/105 (77%), Positives = 81/105 (77%)
 Frame = +2

Query: 98  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 277
           MVNVP              HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 278 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 412
                  IVLKLQCQSCKHYSQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKGTSLF 105
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>AK063789:Os07g0450000 |
          Length = 105

 Score =  165 bits (417), Expect = 3e-41
 Identities = 81/105 (77%), Positives = 81/105 (77%)
 Frame = +2

Query: 98  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 277
           MVNVP              HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 278 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 412
                  IVLKLQCQSCKHYSQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKGTSLF 105
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>Os07g0523100:Os07g0523100 |
          Length = 149

 Score =  163 bits (412), Expect = 1e-40
 Identities = 80/104 (76%), Positives = 80/104 (76%)
 Frame = +2

Query: 101 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 280
           VNVP              HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 46  VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 105

Query: 281 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 412
                 IVLKLQCQSCKHYSQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 106 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKGTSLF 149
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>AK058924:Os07g0523300 |
          Length = 95

 Score =  160 bits (405), Expect = 7e-40
 Identities = 76/86 (88%), Positives = 76/86 (88%)
 Frame = +2

Query: 155 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 334
           HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH        IVLKLQCQSCKH
Sbjct: 10  HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKH 69

Query: 335 YSQRAIKRCKHFEIGGDKKGKGTSLF 412
           YSQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 70  YSQHPIKRCKHFEIGGDKKGKGTSLF 95
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>D10406: |
          Length = 127

 Score =  123 bits (308), Expect = 1e-28
 Identities = 66/106 (62%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = +2

Query: 98  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 277
           MVNVP              HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 278 XXXXXXXIVLKLQCQSCKHYSQRAIK-RCKHFEIGGDKKGKGTSLF 412
                  IVLKLQCQSCKH      +     FEIGGDK G     F
Sbjct: 61  KAKTTKKIVLKLQCQSCKHLLPAPXQGGASIFEIGGDKXGXXNIXF 106
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>AK058830:Os07g0523300 |
          Length = 37

 Score = 78.6 bits (192), Expect = 3e-15
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +2

Query: 302 VLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 412
           VLKLQCQSCKHYSQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 1   VLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKGTSLF 37
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>AK069083: |
          Length = 573

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 91  RSHGERSEDQEDLLQEQGVQEAHPPQGYPV*EG 189
           R +GERS+DQEDLLQEQGVQEAHP QG+ V EG
Sbjct: 541 RQNGERSQDQEDLLQEQGVQEAHPSQGHSVQEG 573
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>AK121439:Os04g0530200 |
          Length = 72

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 528 AKQMLHSPWVITRNLKIIHSSCGKFWHNILNI 433
           AK++ H    + + +K++  SC K W+ + +I
Sbjct: 39  AKELKHLKGAVMKGVKVVGDSCKKAWNKVKSI 70
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>AK105586:Os04g0530200 |
          Length = 73

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 528 AKQMLHSPWVITRNLKIIHSSCGKFWHNILNI 433
           AK++ H    + + +K++  SC K W+ + +I
Sbjct: 40  AKELKHLKGAVMKGVKVVGDSCKKAWNKVKSI 71
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>AK119924:Os04g0211900 |
          Length = 428

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -1

Query: 639 FFFVKQMLHSPWVITVVDTIAKQMLHSPWVITVVDTIAKQMLHSPWVITRNL 484
           F  V+   H+PW++ V  + A+   + P    V DT+ ++ +  P +++  L
Sbjct: 80  FVSVRSRRHAPWIVGVGGSSARN--YGPDETIVFDTVMRKEISGPKLLSTKL 129


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,927,569
Number of extensions: 380560
Number of successful extensions: 960
Number of sequences better than 10.0: 10
Number of HSP's gapped: 959
Number of HSP's successfully gapped: 10
Length of query: 213
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 117
Effective length of database: 11,555,919
Effective search space: 1352042523
Effective search space used: 1352042523
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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