ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf88k09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK110919:Os09g0531100 | 493 | e-139 | 2 | AK067998:Os10g0569200 | 35 | 0.14 | 3 | Os11g0213700:Os11g0213700 | 32 | 0.92 | 4 | Os07g0118000:Os07g0118000 | 30 | 2.7 | 5 | AK073905:Os04g0483600 | 30 | 2.7 | 6 | AK073227:Os04g0483600 | 30 | 2.7 | 7 | Os08g0468700:Os08g0468700 | 30 | 3.5 | 8 | AK068322:Os03g0598200 | 30 | 3.5 | 9 | Os01g0120300:Os01g0120300 | 30 | 4.6 | 10 | Os05g0176800:Os05g0176800 | 29 | 6.0 | 11 | AY062210:Os07g0583600 | 29 | 7.8 | 12 | AK122131:Os07g0583600 | 29 | 7.8 | 13 | AK098890:Os07g0583600 | 29 | 7.8 | 14 | AK073470:Os07g0583600 | 29 | 7.8 | 15 | AK061928:Os07g0583600 | 29 | 7.8 |
|---|
>AK110919:Os09g0531100 | Length = 329 Score = 493 bits (1269), Expect = e-139 Identities = 246/301 (81%), Positives = 266/301 (88%) Frame = +2 Query: 194 QWCWGTPTXXXXXXXXXXXXXXXNTLVCAAVKGPEESLKKTIEVDRLIDMLRDANPGELD 373 +WCWG P TL+ A KGPEESLKKTIEVDRLI+MLRDANP ELD Sbjct: 29 RWCWGAPALSPARRAFHADTRRRKTLLYATDKGPEESLKKTIEVDRLIEMLRDANPRELD 88 Query: 374 LIVVENILAFSEAFWVRLAARIDLCKSDDDKKDYEELAENVMNIVDRVVHKTDEKIEQST 553 IVVEN+LAF E FWVRLAARIDLCKSDDDKKDYEELAENVMNIVDR+VHKTDEKIEQST Sbjct: 89 QIVVENVLAFDEGFWVRLAARIDLCKSDDDKKDYEELAENVMNIVDRLVHKTDEKIEQST 148 Query: 554 DVLKAIISPVMNEGEDAMWPPRNPEALKLMEKEISNREKEGQLDESFLSEVNAQLRQAKE 733 DVLKAIISPVM+EGE+A WPPR+PEALKLMEKEISNREKEGQLDE FLSEVNAQLRQAK+ Sbjct: 149 DVLKAIISPVMHEGENATWPPRDPEALKLMEKEISNREKEGQLDEGFLSEVNAQLRQAKQ 208 Query: 734 DVDKPGLQVMLQKVLQLYAYNFLQKRSYAYKGGEVVVPEKFLESIIEAPENDWNRLLLDG 913 D DKPGLQ MLQKVLQLYA NFLQKRSYAYKGGEV+VPE FLES+I+APEN+WN+LLLDG Sbjct: 209 DGDKPGLQAMLQKVLQLYASNFLQKRSYAYKGGEVIVPESFLESVIKAPENEWNKLLLDG 268 Query: 914 LTVGKGDVSPEEFYAVTKKRIERILIRTEGGSYQQRVLVEYIKEIQARAEEIVNRLQGPA 1093 LTVGKG+VSPEEFYAV KKRIER+LIRTEGGSYQQR+LVEY+KEIQARAEE+V LQGP Sbjct: 269 LTVGKGNVSPEEFYAVIKKRIERVLIRTEGGSYQQRILVEYLKEIQARAEEVVKVLQGPT 328 Query: 1094 M 1096 + Sbjct: 329 I 329
>AK067998:Os10g0569200 | Length = 719 Score = 34.7 bits (78), Expect = 0.14 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 12/96 (12%) Frame = +2 Query: 458 DDKKDYEELAENVMNIVDRVVHKTDEKIEQSTDVLKAIISPVMNEGEDAMWPPRNPEALK 637 DD + E NV+ +VD + EK E+ +V++ I S + E +W P NPE K Sbjct: 50 DDPMELEMGFANVV-VVDNLPVVPPEKFEKLENVIRKIYSQIGAIKEGGLWMPVNPETKK 108 Query: 638 L-----------MEKEISNREKEG-QLDESFLSEVN 709 E E++ + G +LD+S + VN Sbjct: 109 TYGYCFIEYNTPQEAELAREKTNGYKLDKSHIFAVN 144
>Os11g0213700:Os11g0213700 | Length = 915 Score = 32.0 bits (71), Expect = 0.92 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +2 Query: 335 IDMLRDANPGELDLIVVENILAFSEAFWVRLAARIDLCK 451 + L DANP ELD+ +EN+ + EA ++L+ + ++ K Sbjct: 445 LGQLLDANPAELDISSLENVKSTKEAKGIKLSGKRNIVK 483
>Os07g0118000:Os07g0118000 | Length = 455 Score = 30.4 bits (67), Expect = 2.7 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = +2 Query: 269 LVCAAVKGPEESLKKTIEVDRLIDMLRDANPGELDLIVVENILAFSEAFWVRLAARIDLC 448 +VC +V E++ T+ +I A GE LI+VE I +E W RL + C Sbjct: 194 IVCFSVDDLEDANMVTLRNCGVIKHQNHATGGERILIIVELIRDINEGAWRRLYSASKTC 253 Query: 449 KSDDDK 466 ++ K Sbjct: 254 AANGSK 259
>AK073905:Os04g0483600 | Length = 387 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = +2 Query: 392 ILAFSEAFWVRLAARIDLCKSDDDKKDYEELAENVMNIVDRVVHKTDEKIEQSTDVLKAI 571 I+ SE+ W+ ++ D DDD D E +E+ N D ++DE E++ D+ A+ Sbjct: 291 IIPASESEWLEISEDED--DEDDDDDDNENDSEDDANQTDEDDEESDEDAEKNVDMSTAV 348
>AK073227:Os04g0483600 | Length = 662 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = +2 Query: 392 ILAFSEAFWVRLAARIDLCKSDDDKKDYEELAENVMNIVDRVVHKTDEKIEQSTDVLKAI 571 I+ SE+ W+ ++ D DDD D E +E+ N D ++DE E++ D+ A+ Sbjct: 483 IIPASESEWLEISEDED--DEDDDDDDNENDSEDDANQTDEDDEESDEDAEKNVDMSTAV 540
>Os08g0468700:Os08g0468700 | Length = 916 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +2 Query: 833 EVVVPEKFLESIIEAPENDWNRLLLDGLTVGKGDVSPEEFYAVTKKRIERILIRTEGG 1006 E ++ E + S+I AP +D L ++G+T +G Y+ KRI R+ + +GG Sbjct: 353 EYIINELNVNSVITAPGHD-EILPINGITTQRGYTMKGYAYSGGGKRITRVEVTLDGG 409
>AK068322:Os03g0598200 | Length = 912 Score = 30.0 bits (66), Expect = 3.5 Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 19/174 (10%) Frame = +2 Query: 374 LIVVENILAFSEAFWVRLAARIDLCKSDDDKKDYEELAENVMNIVDRVVHKTDEKIEQST 553 +I+ E + +F E F L + DK D L + +++ V ++ +++ S Sbjct: 747 VIIHEELCSFPEIF----LPISSLMQEIMDKSDLPGLLQYILHEVIELIKNRSDEVHASR 802 Query: 554 DVLKAI---------ISPVMNE----GEDAMWPPRNPEALKLMEKEISNREK----EGQL 682 L+ ++P E G D P R +K M+K + + +K E + Sbjct: 803 QPLQMRKQKPEPIRQLNPKFEENYIKGLDYD-PDRERAQMKKMKKRLKSEKKGAMRELRK 861 Query: 683 DESFLSEVNAQ--LRQAKEDVDKPGLQVMLQKVLQLYAYNFLQKRSYAYKGGEV 838 D FLS V + ++Q +E +K G A FLQ++ +A+K G++ Sbjct: 862 DNYFLSAVKEKERIKQEQERAEKYGK-----------AMAFLQEQEHAFKSGQL 904
>Os01g0120300:Os01g0120300 | Length = 910 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -2 Query: 458 HPICIDQFEQPAEPRKPH*TLEYFQPLLDQALRDLHLSAYQSAYPLQW 315 HP+ D F PAE R+P L +D A R LS Q+ P+ W Sbjct: 141 HPMGWDAFGLPAEQREPTLRLPLNGTSIDSAHRLALLSYNQAEVPVNW 188
>Os05g0176800:Os05g0176800 | Length = 745 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/85 (22%), Positives = 42/85 (49%) Frame = +2 Query: 635 KLMEKEISNREKEGQLDESFLSEVNAQLRQAKEDVDKPGLQVMLQKVLQLYAYNFLQKRS 814 +L+ K++ KEG ++ + SEV ++++ +D ++K L+ + + + Sbjct: 443 QLLRKKMVQTAKEGMMNNASSSEVYGKMQEVFIKMDDKSNAKSVRKELKELKDAVIPEGN 502 Query: 815 YAYKGGEVVVPEKFLESIIEAPEND 889 A + EV PEK +E+ + N+ Sbjct: 503 GAGRVSEVFDPEKHIEAYLPVRVNE 527
>AY062210:Os07g0583600 | Length = 544 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = +2 Query: 293 PEESLKKTIEVDRLIDMLRDANPGELDLIVVE---NILAFSEAF------WVRLAARIDL 445 P+ES+ DRL+ M++ +P L L+ +E N F + F + + IDL Sbjct: 385 PDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDL 444 Query: 446 CKSDDDKK----DYEELAENVMNIV 508 DD++ + LA ++N++ Sbjct: 445 TLPRDDRERINMEQHCLAREIVNLI 469
>AK122131:Os07g0583600 | Length = 544 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = +2 Query: 293 PEESLKKTIEVDRLIDMLRDANPGELDLIVVE---NILAFSEAF------WVRLAARIDL 445 P+ES+ DRL+ M++ +P L L+ +E N F + F + + IDL Sbjct: 385 PDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDL 444 Query: 446 CKSDDDKK----DYEELAENVMNIV 508 DD++ + LA ++N++ Sbjct: 445 TLPRDDRERINMEQHCLAREIVNLI 469
>AK098890:Os07g0583600 | Length = 544 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = +2 Query: 293 PEESLKKTIEVDRLIDMLRDANPGELDLIVVE---NILAFSEAF------WVRLAARIDL 445 P+ES+ DRL+ M++ +P L L+ +E N F + F + + IDL Sbjct: 385 PDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDL 444 Query: 446 CKSDDDKK----DYEELAENVMNIV 508 DD++ + LA ++N++ Sbjct: 445 TLPRDDRERINMEQHCLAREIVNLI 469
>AK073470:Os07g0583600 | Length = 544 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = +2 Query: 293 PEESLKKTIEVDRLIDMLRDANPGELDLIVVE---NILAFSEAF------WVRLAARIDL 445 P+ES+ DRL+ M++ +P L L+ +E N F + F + + IDL Sbjct: 385 PDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDL 444 Query: 446 CKSDDDKK----DYEELAENVMNIV 508 DD++ + LA ++N++ Sbjct: 445 TLPRDDRERINMEQHCLAREIVNLI 469
>AK061928:Os07g0583600 | Length = 343 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = +2 Query: 293 PEESLKKTIEVDRLIDMLRDANPGELDLIVVE---NILAFSEAF------WVRLAARIDL 445 P+ES+ DRL+ M++ +P L L+ +E N F + F + + IDL Sbjct: 184 PDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDL 243 Query: 446 CKSDDDKK----DYEELAENVMNIV 508 DD++ + LA ++N++ Sbjct: 244 TLPRDDRERINMEQHCLAREIVNLI 268 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,121,897 Number of extensions: 617282 Number of successful extensions: 2209 Number of sequences better than 10.0: 15 Number of HSP's gapped: 2205 Number of HSP's successfully gapped: 15 Length of query: 411 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 308 Effective length of database: 11,275,632 Effective search space: 3472894656 Effective search space used: 3472894656 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
