>Q700D9:MYBF_ARATH Putative Myb family transcription factor At1g14600 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 255
 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 39/66 (59%), Positives = 45/66 (68%)
 Frame = +3

Query: 1044 LRWTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYRHAKFIPEIK 1223
            LRWT ELH  FV AV+ L G  KATPK VLK+M V GLTI HVKSHLQ YR ++     K
Sbjct: 26   LRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLGK 85

Query: 1224 EEKKAS 1241
             E+ +S
Sbjct: 86   PEESSS 91

>Q9ZWJ9:ARR2_ARATH Two-component response regulator ARR2 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 664

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            W++ELH++FV AVN+L G DKA PK +L++M V GLT  +V SHLQKYR
Sbjct: 221  WSVELHQQFVAAVNQL-GVDKAVPKKILEMMNVPGLTRENVASHLQKYR 268

>Q8L9Y3:ARR14_ARATH Two-component response regulator ARR14 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 382

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            W++ELH++FV AVNKL G DKA PK +L+LM V GL+  +V SHLQK+R
Sbjct: 205  WSIELHQQFVNAVNKL-GIDKAVPKRILELMNVPGLSRENVASHLQKFR 252

>Q940D0:ARR1_ARATH Two-component response regulator ARR1 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 690

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            W++ELH++FV AVN+L G +KA PK +L+LM V GLT  +V SHLQKYR
Sbjct: 242  WSVELHQQFVAAVNQL-GVEKAVPKKILELMNVPGLTRENVASHLQKYR 289

>Q9FGT7:ARR18_ARATH Two-component response regulator ARR18 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 635

 Score = 59.3 bits (142), Expect = 5e-08
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            W+ ELH++FV AV +L G DKA PK +L LM ++GLT  +V SHLQKYR
Sbjct: 199  WSQELHQKFVSAVQQL-GLDKAVPKKILDLMSIEGLTRENVASHLQKYR 246

>P62598:ARR12_ARATH Two-component response regulator ARR12 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 596

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            WT+ELH++FV AVN+L G +KA PK +L LM V+ LT  +V SHLQK+R
Sbjct: 200  WTVELHKKFVAAVNQL-GYEKAMPKKILDLMNVEKLTRENVASHLQKFR 247

>Q6LA43:APRR2_ARATH Two-component response regulator-like APRR2 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 535

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR-HAKFI 1211
            WT ELH++FV+AV +L G D+A P  +L+LMKV  LT ++V SHLQK+R H K I
Sbjct: 301  WTPELHKKFVQAVEQL-GVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNI 354

>Q9FXD6:ARR11_ARATH Two-component response regulator ARR11 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 521

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            W+ ELH +FV AVN++    KA PK +L LM V  LT  +V SHLQKYR
Sbjct: 198  WSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYR 246

>O49397:ARR10_ARATH Two-component response regulator ARR10 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 552

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYRHA-KFIPE--I 1220
            WT ELH +F+ AV+ L G ++A PK +L LM VD LT  +V SHLQK+R A K + +  I
Sbjct: 188  WTHELHNKFLAAVDHL-GVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDAI 246

Query: 1221 KEEKKASLDVKKVQPGS 1271
            ++  +A++D   +Q  S
Sbjct: 247  QQANRAAIDSHFMQMNS 263

>Q9LZJ8:ARR20_ARATH Putative two-component response regulator ARR20 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 426

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
 Frame = +3

Query: 1044 LRWTLELHERFVEAVNKLEGPDKATPKGVLKLMK----VDGLTIYHVKSHLQKYRHA 1202
            ++WT ELH +F  AV K+   +KA PK +LK M+    V GLT  +V SHLQKYR +
Sbjct: 214  MQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQS 270

>Q9M9B9:ARR19_ARATH Putative two-component response regulator ARR19 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 407

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
 Frame = +3

Query: 1044 LRWTLELHERFVEAVNKLEGPDKATPKGV---LKLMKVDGLTIYHVKSHLQKYR---HAK 1205
            + WT ELH++F+EA+  + G +KA PK +   L+ M+++G+T  +V SHLQK+R      
Sbjct: 218  MTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEEN 277

Query: 1206 FIPEIKEEKKASLDVKKVQPGSSGSD 1283
             IP+  +    +     + P   GSD
Sbjct: 278  QIPQQTQGNGWATAYGTLAPSLQGSD 303

>Q9LYP5:ARR21_ARATH Putative two-component response regulator ARR21 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 592

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +3

Query: 1044 LRWTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            ++WT  LH+ F++A+  + G DKA PK +L  M V  LT  +V SHLQKYR
Sbjct: 225  IQWTDSLHDLFLQAIRHI-GLDKAVPKKILAFMSVPYLTRENVASHLQKYR 274

>Q9ZVD3:ARR13_ARATH Putative two-component response regulator ARR13 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 572

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQKYR 1196
            WT  L + F++A+  + G DK  PK +L +M V  LT  +V SHLQKYR
Sbjct: 230  WTNPLQDLFLQAIQHI-GYDKVVPKKILAIMNVPYLTRENVASHLQKYR 277

>Q9FJ16:APRR4_ARATH Putative two-component response regulator-like APRR4 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 292

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 22/46 (47%), Positives = 32/46 (69%)
 Frame = +3

Query: 1050 WTLELHERFVEAVNKLEGPDKATPKGVLKLMKVDGLTIYHVKSHLQ 1187
            W  ELH+ F+ AV+ L G ++A PK +L +MKVD ++  +V SHLQ
Sbjct: 228  WDEELHQNFLNAVDFL-GLERAVPKKILDVMKVDYISRENVASHLQ 272

>Q09950:YSR2_CAEEL Uncharacterized protein F59B10.2 - Caenorhabditis elegans|
          Length = 482

 Score = 36.2 bits (82), Expect = 0.46
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
 Frame = +3

Query: 1194 RHAKFIPEIKEEKKASLDV------------KKVQPGSSGSDPFKNKNLAEALRMQLEVQ 1337
            RHA F   I+EE+K S D+            K +Q GS  SD       ++++      +
Sbjct: 116  RHAHF-ESIQEEEKISEDLPTAQLPSKSPFKKAIQSGSESSD-------SDSIIFDEVFE 167

Query: 1338 KXXXXXXXXXXXXXXXXXXHAKYLQRILEEQQKAIASSGSSLSLKTPTEPSESTSKDGAE 1517
            +                    K +++   ++QKA      +    TPTE S  +S D + 
Sbjct: 168  EVLPSPPRKPAPARTAPIVVEKKIEKPAVKEQKARKKKEKT---PTPTESSFESSSDSSS 224

Query: 1518 PEEATTSSPQPSKNSETES*RPSHCPVAS 1604
              E++TSS   S  SE+ES   S   V+S
Sbjct: 225  TSESSTSSESSSSASESESESKSESQVSS 253

>P19246:NFH_MOUSE Neurofilament heavy polypeptide - Mus musculus (Mouse)|
          Length = 1090

 Score = 36.2 bits (82), Expect = 0.46
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
 Frame = +3

Query: 1218 IKEEKKASLDVKKVQ-------PGSSGSDPFKNKNLAEALRMQLEVQKXXXXXXXXXXXX 1376
            +KEE KA    KKV+       P +   +  K++   EA + ++E +K            
Sbjct: 890  VKEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDST- 948

Query: 1377 XXXXXXHAKYLQRILEEQQKAIAS---SGSSLSLKTPTEPSESTSKDGAEPEEATTSSPQ 1547
                   A+  +    E++KA+AS   + + L +K   +P E T     E E+  T + +
Sbjct: 949  -------AEAKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAED--TKAKE 999

Query: 1548 PSKNSETES*RPSHCPVA 1601
            PSK +ETE  +    P A
Sbjct: 1000 PSKPTETEKPKKEEMPAA 1017

>Q12153:SSF2_YEAST Ribosome biogenesis protein SSF2 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 453

 Score = 35.4 bits (80), Expect = 0.78
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +3

Query: 1413 RILEEQQKAIASSGSSLSLKTPTEPSESTSKD-GAEPEEATTSSPQPSKNSE 1565
            R+++ Q      S +SLS KTP + +++  ++ G E E+     P+PS+NS+
Sbjct: 267  RVVDNQDVKAKHSQTSLSQKTPVKMTDNEEREKGIEEEDVEMEEPKPSENSQ 318

>P54674:PI3K2_DICDI Phosphatidylinositol 3-kinase 2 - Dictyostelium discoideum (Slime|
            mold)
          Length = 1858

 Score = 35.0 bits (79), Expect = 1.0
 Identities = 22/53 (41%), Positives = 27/53 (50%)
 Frame = +3

Query: 1404 YLQRILEEQQKAIASSGSSLSLKTPTEPSESTSKDGAEPEEATTSSPQPSKNS 1562
            Y Q I  +QQ+    S SS +  T T  S S+S   +     T SSPQPS NS
Sbjct: 418  YTQLIPSQQQQQPTESNSSSNTNTTTTSSSSSSSSSS----LTISSPQPSNNS 466

>Q6AXX1:SLNL1_RAT Schlafen-like protein 1 - Rattus norvegicus (Rat)|
          Length = 414

 Score = 33.9 bits (76), Expect = 2.3
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = +3

Query: 1407 LQRILEEQQ--KAIASSGSSLSLKTPTEPSESTSKD--GAEPEEATTSSPQPSKNSETES 1574
            LQ  LEEQ   K + + G  L L    E      +D  G  P  +   SP PS       
Sbjct: 112  LQMALEEQLILKELTARGKELVLSEGLESLHHREQDDSGPSPSHSPGPSPGPSPGPSPGF 171

Query: 1575 *RPSHCPVASPLPRWQSCG 1631
             RP    +A P P W S G
Sbjct: 172  RRPPLPQLADPPPNWGSAG 190

>P13692:P54_ENTFC Protein P54 precursor - Enterococcus faecium (Streptococcus faecium)|
          Length = 516

 Score = 33.9 bits (76), Expect = 2.3
 Identities = 28/117 (23%), Positives = 46/117 (39%)
 Frame = +3

Query: 1224 EEKKASLDVKKVQPGSSGSDPFKNKNLAEALRMQLEVQKXXXXXXXXXXXXXXXXXXHAK 1403
            E+KKA L+ KK +  +  +   +   LAE  R Q   +K                   A 
Sbjct: 211  EDKKADLNRKKAEAEAEQARIREQARLAEQARQQAAQEK-------AEKEAREQAAAQAA 263

Query: 1404 YLQRILEEQQKAIASSGSSLSLKTPTEPSESTSKDGAEPEEATTSSPQPSKNSETES 1574
              Q +        +SS +  S +    P  ST+++    E +TT+    + +S TES
Sbjct: 264  QTQALSSASTTTESSSAAQSSSEESKAPESSTTEESTSTESSTTTENSSTGSSSTES 320

>O15047:SET1A_HUMAN Histone-lysine N-methyltransferase, H3 lysine-4 specific SET1 - Homo|
            sapiens (Human)
          Length = 1707

 Score = 33.1 bits (74), Expect = 3.9
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 1455 SSLSLKTPTEPSESTSKDGAEPEEATTSSPQPSKNSETES*RPSHCPVASPLPR 1616
            S+   ++ +  S S+S   +    +++SS + S   E E  RP+  P ASP PR
Sbjct: 1029 STSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPR 1082

>Q9JM99:PRG4_MOUSE Proteoglycan-4 precursor - Mus musculus (Mouse)|
          Length = 1054

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 1473 TPTEPSESTSKDGAEPEEATTSSPQPSKNSETES 1574
            TP EP  +T K   EPE  TT  P+P+   E ES
Sbjct: 417  TPKEPGPTTPK---EPEPTTTKEPEPTTTKEPES 447

>Q5SZV5:K0319_MOUSE Uncharacterized protein KIAA0319 precursor - Mus musculus (Mouse)|
          Length = 1081

 Score = 32.3 bits (72), Expect = 6.6
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +3

Query: 1455 SSLSLKTPTEPSESTSKDGAEPEEATTSSPQPSKNSETES*RPSHCPVASPL 1610
            SS+S   P+  S   +++G E EE      QPS +S  E   PSH P  + L
Sbjct: 239  SSISSVWPSSASPLPTEEGLEGEETLQLQEQPSNSSGKEVPMPSHNPSPASL 290

>Q868Z9:PPN_DROME Papilin precursor - Drosophila melanogaster (Fruit fly)|
          Length = 2898

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +3

Query: 1425 EQQKAIASSGSSLSLKTPTEPSESTSKDGAEPEEATTSSPQPSKNSETES 1574
            E   AIAS GS+    T  + S STS D       T SSP    +  T+S
Sbjct: 1089 ESTDAIASDGSTTEGSTVEDLSSSTSSDVTSDSTITDSSPSTEVSGSTDS 1138

>Q96RN5:PCQAP_HUMAN Positive cofactor 2 glutamine/Q-rich-associated protein - Homo|
            sapiens (Human)
          Length = 788

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 1464 SLKTPTEPSESTSKDGAEPEEATTSSPQPSKNS--ETES*RPSHCPVASPLPRWQSCGGH 1637
            S+  P +PS    +  ++P    +S P PS +S   + S +PS  PV +  P+  S    
Sbjct: 447  SMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSP 506

Query: 1638 GDIYT 1652
            G + T
Sbjct: 507  GPLNT 511

>Q9T076:ENL2_ARATH Early nodulin-like protein 2 precursor - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 349

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 1446 SSGSSLSLKTPTEPSESTSKDGAEPEEATTSSPQPSKNSETES*RPSHCPVASP 1607
            S  SS ++   T P  S +     P   TTS P P K++   S  PS  P+ SP
Sbjct: 186  SPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS--PSSAPMTSP 237


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 299,666,171
Number of extensions: 6356025
Number of successful extensions: 21618
Number of sequences better than 10.0: 26
Number of HSP's gapped: 21543
Number of HSP's successfully gapped: 26
Length of query: 593
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 474
Effective length of database: 68,045,334
Effective search space: 32253488316
Effective search space used: 32253488316
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)