Clone Name | FLbaf91j04 |
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Clone Library Name | barley_pub |
>ref|NM_001049817.1| Oryza sativa (japonica cultivar-group) Os01g0546500 (Os01g0546500) mRNA, complete cds Length = 1215 Score = 488 bits (246), Expect = e-134 Identities = 477/554 (86%) Strand = Plus / Plus Query: 543 cgcagacggaggacgtggacgagatcttccgaaagatgaaagagacggggctgataccta 602 ||||| ||||||||||||||||||||||| | |||||||| ||||| |||||||| || | Sbjct: 477 cgcagccggaggacgtggacgagatcttcaggaagatgaaggagactgggctgattccga 536 Query: 603 acgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatgaagc 662 |||||||||||||||||||| |||| ||||||| ||| |||||| |||||||||||||| Sbjct: 537 acgccgtcgccatgctcgacggcctgtgcaagagcgggctggtgcaggaggccatgaagc 596 Query: 663 tgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagctgttg 722 |||||||||| ||||| |||||||| ||||||| || || ||| ||||||| || |||| Sbjct: 597 tgttcggtcttatgcgagagaagggttccatccctgaggttgtcgtctacaccgcggttg 656 Query: 723 tcgaggccttctgcaaaggagccaagttggacgatgccgtcaggatcttcaggaagatgc 782 ||||||| |||||||| | | |||| | |||||||| || ||||| |||| |||||||| Sbjct: 657 tcgaggctttctgcaaggcacgcaagcttgacgatgctgtgaggattttcaagaagatgc 716 Query: 783 agggcaacggggtcattccaaatgccttcagttactggttgattatacagggtctgtgca 842 |||| || ||||| ||||| || |||||||| ||||||||| | |||||||| ||||||| Sbjct: 717 aggggaatggggttattccgaacgccttcagctactggttgctaatacaggggctgtgca 776 Query: 843 agggcgacagactggatgaggcggttgctttctgtgtggagatgttcgaggctgggcatt 902 |||| | || |||||||| || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 777 agggtgggaggctggatgatgcagttgccttctgcgtggagatgtttgaggctgggcatt 836 Query: 903 caccgaatgctgctacatttgtgggtttggttgatgctgtatgcaagatgaagggggtag 962 | |||||||| || |||||||| |||||||||| ||||||||| |||||||||| Sbjct: 837 cgccgaatgccatgacctttgtgggcttggttgatgaggtatgcaaggctaagggggtag 896 Query: 963 aggagggtgagaaccttgtgaggagcttccaggagaggaactttgccattgatgagaagt 1022 |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 897 aggaggctgagaagctcgtgaggagtttccaggacaggaactttgccattgatgagaagt 956 Query: 1023 ccatcagggaacatttggacaagaaagggccattctcaccgattgtttgggaggtgatct 1082 |||||||||| || |||||||||||||| |||||||| ||| | ||||||||||||||| Sbjct: 957 ccatcagggagcacttggacaagaaaggtccattctcgccggtcatttgggaggtgatct 1016 Query: 1083 ttgggaagaagaaa 1096 |||| ||||||||| Sbjct: 1017 ttggaaagaagaaa 1030 Score = 135 bits (68), Expect = 4e-28 Identities = 173/208 (83%) Strand = Plus / Plus Query: 115 gatgagcctgcaaattccggctaggtcacgcggcctccgccgcctcctcctgctgggtgg 174 ||||||| |||| |||||||| || || | || ||||||||||||||||| || || || Sbjct: 22 gatgagcttgcagattccggcgagatccggagggctccgccgcctcctcctcctcggagg 81 Query: 175 agaatctgggatccggcggccgtactccaccggtgaccgtcgccgccgggtgatccgcga 234 | ||||||| || |||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 82 ggcggatgggatcaggaggccctactccacgggcgaccgccggcgccgggtgatccgcga 141 Query: 235 ggcacgggatgaggaggaggacgaggccttcctccgcaccctcaactttggggctgaccc 294 ||| ||| | |||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 142 ggcgcggcaggaggaggaggacgaggccttcctccgcaccctcaacttcagcgccgaccc 201 Query: 295 agacaacaaccccctgcccccaccgccg 322 || |||||||||| ||| || |||||| Sbjct: 202 ggagaacaaccccccgccaccgccgccg 229 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 438 ccatcggggagtcgctgatggagaagcttaagctgggcgacgc 480 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 345 ccatcggggaatcgctgatggagaagcttaagctgggcgacgc 387 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 374 gacatcctccgacgcgccgccgggaagcagc 404 |||||||||||||||||||||||||| |||| Sbjct: 293 gacatcctccgacgcgccgccgggaaacagc 323
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 488 bits (246), Expect = e-134 Identities = 477/554 (86%) Strand = Plus / Minus Query: 543 cgcagacggaggacgtggacgagatcttccgaaagatgaaagagacggggctgataccta 602 ||||| ||||||||||||||||||||||| | |||||||| ||||| |||||||| || | Sbjct: 20309795 cgcagccggaggacgtggacgagatcttcaggaagatgaaggagactgggctgattccga 20309736 Query: 603 acgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatgaagc 662 |||||||||||||||||||| |||| ||||||| ||| |||||| |||||||||||||| Sbjct: 20309735 acgccgtcgccatgctcgacggcctgtgcaagagcgggctggtgcaggaggccatgaagc 20309676 Query: 663 tgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagctgttg 722 |||||||||| ||||| |||||||| ||||||| || || ||| ||||||| || |||| Sbjct: 20309675 tgttcggtcttatgcgagagaagggttccatccctgaggttgtcgtctacaccgcggttg 20309616 Query: 723 tcgaggccttctgcaaaggagccaagttggacgatgccgtcaggatcttcaggaagatgc 782 ||||||| |||||||| | | |||| | |||||||| || ||||| |||| |||||||| Sbjct: 20309615 tcgaggctttctgcaaggcacgcaagcttgacgatgctgtgaggattttcaagaagatgc 20309556 Query: 783 agggcaacggggtcattccaaatgccttcagttactggttgattatacagggtctgtgca 842 |||| || ||||| ||||| || |||||||| ||||||||| | |||||||| ||||||| Sbjct: 20309555 aggggaatggggttattccgaacgccttcagctactggttgctaatacaggggctgtgca 20309496 Query: 843 agggcgacagactggatgaggcggttgctttctgtgtggagatgttcgaggctgggcatt 902 |||| | || |||||||| || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 20309495 agggtgggaggctggatgatgcagttgccttctgcgtggagatgtttgaggctgggcatt 20309436 Query: 903 caccgaatgctgctacatttgtgggtttggttgatgctgtatgcaagatgaagggggtag 962 | |||||||| || |||||||| |||||||||| ||||||||| |||||||||| Sbjct: 20309435 cgccgaatgccatgacctttgtgggcttggttgatgaggtatgcaaggctaagggggtag 20309376 Query: 963 aggagggtgagaaccttgtgaggagcttccaggagaggaactttgccattgatgagaagt 1022 |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 20309375 aggaggctgagaagctcgtgaggagtttccaggacaggaactttgccattgatgagaagt 20309316 Query: 1023 ccatcagggaacatttggacaagaaagggccattctcaccgattgtttgggaggtgatct 1082 |||||||||| || |||||||||||||| |||||||| ||| | ||||||||||||||| Sbjct: 20309315 ccatcagggagcacttggacaagaaaggtccattctcgccggtcatttgggaggtgatct 20309256 Query: 1083 ttgggaagaagaaa 1096 |||| ||||||||| Sbjct: 20309255 ttggaaagaagaaa 20309242 Score = 135 bits (68), Expect = 4e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 115 gatgagcctgcaaattccggctaggtcacgcggcctccgccgcctcctcctgctgggtgg 174 ||||||| |||| |||||||| || || | || ||||||||||||||||| || || || Sbjct: 20310250 gatgagcttgcagattccggcgagatccggagggctccgccgcctcctcctcctcggagg 20310191 Query: 175 agaatctgggatccggcggccgtactccaccggtgaccgtcgccgccgggtgatccgcga 234 | ||||||| || |||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 20310190 ggcggatgggatcaggaggccctactccacgggcgaccgccggcgccgggtgatccgcga 20310131 Query: 235 ggcacgggatgaggaggaggacgaggccttcctccgcaccctcaactttggggctgaccc 294 ||| ||| | |||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 20310130 ggcgcggcaggaggaggaggacgaggccttcctccgcaccctcaacttcagcgccgaccc 20310071 Query: 295 agacaacaaccccctgcccccaccgccg 322 || |||||||||| ||| || |||||| Sbjct: 20310070 ggagaacaaccccccgccaccgccgccg 20310043 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 438 ccatcggggagtcgctgatggagaagcttaagctgggcgacgc 480 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 20309927 ccatcggggaatcgctgatggagaagcttaagctgggcgacgc 20309885 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Minus Query: 374 gacatcctccgacgcgccgccgggaagcagc 404 |||||||||||||||||||||||||| |||| Sbjct: 20309979 gacatcctccgacgcgccgccgggaaacagc 20309949 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ccgggaagcagcagcagcagg 413 ||||||||||||||||||||| Sbjct: 25702051 ccgggaagcagcagcagcagg 25702031 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 39135640 gcctccgccgcctcctcctgc 39135660
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 488 bits (246), Expect = e-134 Identities = 477/554 (86%) Strand = Plus / Minus Query: 543 cgcagacggaggacgtggacgagatcttccgaaagatgaaagagacggggctgataccta 602 ||||| ||||||||||||||||||||||| | |||||||| ||||| |||||||| || | Sbjct: 75828 cgcagccggaggacgtggacgagatcttcaggaagatgaaggagactgggctgattccga 75769 Query: 603 acgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatgaagc 662 |||||||||||||||||||| |||| ||||||| ||| |||||| |||||||||||||| Sbjct: 75768 acgccgtcgccatgctcgacggcctgtgcaagagcgggctggtgcaggaggccatgaagc 75709 Query: 663 tgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagctgttg 722 |||||||||| ||||| |||||||| ||||||| || || ||| ||||||| || |||| Sbjct: 75708 tgttcggtcttatgcgagagaagggttccatccctgaggttgtcgtctacaccgcggttg 75649 Query: 723 tcgaggccttctgcaaaggagccaagttggacgatgccgtcaggatcttcaggaagatgc 782 ||||||| |||||||| | | |||| | |||||||| || ||||| |||| |||||||| Sbjct: 75648 tcgaggctttctgcaaggcacgcaagcttgacgatgctgtgaggattttcaagaagatgc 75589 Query: 783 agggcaacggggtcattccaaatgccttcagttactggttgattatacagggtctgtgca 842 |||| || ||||| ||||| || |||||||| ||||||||| | |||||||| ||||||| Sbjct: 75588 aggggaatggggttattccgaacgccttcagctactggttgctaatacaggggctgtgca 75529 Query: 843 agggcgacagactggatgaggcggttgctttctgtgtggagatgttcgaggctgggcatt 902 |||| | || |||||||| || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 75528 agggtgggaggctggatgatgcagttgccttctgcgtggagatgtttgaggctgggcatt 75469 Query: 903 caccgaatgctgctacatttgtgggtttggttgatgctgtatgcaagatgaagggggtag 962 | |||||||| || |||||||| |||||||||| ||||||||| |||||||||| Sbjct: 75468 cgccgaatgccatgacctttgtgggcttggttgatgaggtatgcaaggctaagggggtag 75409 Query: 963 aggagggtgagaaccttgtgaggagcttccaggagaggaactttgccattgatgagaagt 1022 |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 75408 aggaggctgagaagctcgtgaggagtttccaggacaggaactttgccattgatgagaagt 75349 Query: 1023 ccatcagggaacatttggacaagaaagggccattctcaccgattgtttgggaggtgatct 1082 |||||||||| || |||||||||||||| |||||||| ||| | ||||||||||||||| Sbjct: 75348 ccatcagggagcacttggacaagaaaggtccattctcgccggtcatttgggaggtgatct 75289 Query: 1083 ttgggaagaagaaa 1096 |||| ||||||||| Sbjct: 75288 ttggaaagaagaaa 75275 Score = 135 bits (68), Expect = 4e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 115 gatgagcctgcaaattccggctaggtcacgcggcctccgccgcctcctcctgctgggtgg 174 ||||||| |||| |||||||| || || | || ||||||||||||||||| || || || Sbjct: 76283 gatgagcttgcagattccggcgagatccggagggctccgccgcctcctcctcctcggagg 76224 Query: 175 agaatctgggatccggcggccgtactccaccggtgaccgtcgccgccgggtgatccgcga 234 | ||||||| || |||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 76223 ggcggatgggatcaggaggccctactccacgggcgaccgccggcgccgggtgatccgcga 76164 Query: 235 ggcacgggatgaggaggaggacgaggccttcctccgcaccctcaactttggggctgaccc 294 ||| ||| | |||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 76163 ggcgcggcaggaggaggaggacgaggccttcctccgcaccctcaacttcagcgccgaccc 76104 Query: 295 agacaacaaccccctgcccccaccgccg 322 || |||||||||| ||| || |||||| Sbjct: 76103 ggagaacaaccccccgccaccgccgccg 76076 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 438 ccatcggggagtcgctgatggagaagcttaagctgggcgacgc 480 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75960 ccatcggggaatcgctgatggagaagcttaagctgggcgacgc 75918 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Minus Query: 374 gacatcctccgacgcgccgccgggaagcagc 404 |||||||||||||||||||||||||| |||| Sbjct: 76012 gacatcctccgacgcgccgccgggaaacagc 75982
>dbj|AK069340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013K01, full insert sequence Length = 1219 Score = 488 bits (246), Expect = e-134 Identities = 477/554 (86%) Strand = Plus / Plus Query: 543 cgcagacggaggacgtggacgagatcttccgaaagatgaaagagacggggctgataccta 602 ||||| ||||||||||||||||||||||| | |||||||| ||||| |||||||| || | Sbjct: 479 cgcagccggaggacgtggacgagatcttcaggaagatgaaggagactgggctgattccga 538 Query: 603 acgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatgaagc 662 |||||||||||||||||||| |||| ||||||| ||| |||||| |||||||||||||| Sbjct: 539 acgccgtcgccatgctcgacggcctgtgcaagagcgggctggtgcaggaggccatgaagc 598 Query: 663 tgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagctgttg 722 |||||||||| ||||| |||||||| ||||||| || || ||| ||||||| || |||| Sbjct: 599 tgttcggtcttatgcgagagaagggttccatccctgaggttgtcgtctacaccgcggttg 658 Query: 723 tcgaggccttctgcaaaggagccaagttggacgatgccgtcaggatcttcaggaagatgc 782 ||||||| |||||||| | | |||| | |||||||| || ||||| |||| |||||||| Sbjct: 659 tcgaggctttctgcaaggcacgcaagcttgacgatgctgtgaggattttcaagaagatgc 718 Query: 783 agggcaacggggtcattccaaatgccttcagttactggttgattatacagggtctgtgca 842 |||| || ||||| ||||| || |||||||| ||||||||| | |||||||| ||||||| Sbjct: 719 aggggaatggggttattccgaacgccttcagctactggttgctaatacaggggctgtgca 778 Query: 843 agggcgacagactggatgaggcggttgctttctgtgtggagatgttcgaggctgggcatt 902 |||| | || |||||||| || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 779 agggtgggaggctggatgatgcagttgccttctgcgtggagatgtttgaggctgggcatt 838 Query: 903 caccgaatgctgctacatttgtgggtttggttgatgctgtatgcaagatgaagggggtag 962 | |||||||| || |||||||| |||||||||| ||||||||| |||||||||| Sbjct: 839 cgccgaatgccatgacctttgtgggcttggttgatgaggtatgcaaggctaagggggtag 898 Query: 963 aggagggtgagaaccttgtgaggagcttccaggagaggaactttgccattgatgagaagt 1022 |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 899 aggaggctgagaagctcgtgaggagtttccaggacaggaactttgccattgatgagaagt 958 Query: 1023 ccatcagggaacatttggacaagaaagggccattctcaccgattgtttgggaggtgatct 1082 |||||||||| || |||||||||||||| |||||||| ||| | ||||||||||||||| Sbjct: 959 ccatcagggagcacttggacaagaaaggtccattctcgccggtcatttgggaggtgatct 1018 Query: 1083 ttgggaagaagaaa 1096 |||| ||||||||| Sbjct: 1019 ttggaaagaagaaa 1032 Score = 135 bits (68), Expect = 4e-28 Identities = 173/208 (83%) Strand = Plus / Plus Query: 115 gatgagcctgcaaattccggctaggtcacgcggcctccgccgcctcctcctgctgggtgg 174 ||||||| |||| |||||||| || || | || ||||||||||||||||| || || || Sbjct: 24 gatgagcttgcagattccggcgagatccggagggctccgccgcctcctcctcctcggagg 83 Query: 175 agaatctgggatccggcggccgtactccaccggtgaccgtcgccgccgggtgatccgcga 234 | ||||||| || |||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 84 ggcggatgggatcaggaggccctactccacgggcgaccgccggcgccgggtgatccgcga 143 Query: 235 ggcacgggatgaggaggaggacgaggccttcctccgcaccctcaactttggggctgaccc 294 ||| ||| | |||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 144 ggcgcggcaggaggaggaggacgaggccttcctccgcaccctcaacttcagcgccgaccc 203 Query: 295 agacaacaaccccctgcccccaccgccg 322 || |||||||||| ||| || |||||| Sbjct: 204 ggagaacaaccccccgccaccgccgccg 231 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 438 ccatcggggagtcgctgatggagaagcttaagctgggcgacgc 480 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 347 ccatcggggaatcgctgatggagaagcttaagctgggcgacgc 389 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 374 gacatcctccgacgcgccgccgggaagcagc 404 |||||||||||||||||||||||||| |||| Sbjct: 295 gacatcctccgacgcgccgccgggaaacagc 325
>ref|NM_001049818.1| Oryza sativa (japonica cultivar-group) Os01g0546600 (Os01g0546600) mRNA, complete cds Length = 489 Score = 125 bits (63), Expect = 4e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 543 cgcagacggaggacgtggacgagatcttccgaaagatgaaagagacggggctgataccta 602 ||||| ||||||||||||||||||||||| | |||||||| ||||| |||||||| || | Sbjct: 115 cgcagccggaggacgtggacgagatcttcaggaagatgaaggagactgggctgattccga 56 Query: 603 acgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccat 657 |||||||||||||||||||| |||| ||||||| ||| |||||| ||||||||| Sbjct: 55 acgccgtcgccatgctcgacggcctgtgcaagagcgggctggtgcaggaggccat 1 Score = 123 bits (62), Expect = 2e-24 Identities = 110/126 (87%) Strand = Plus / Minus Query: 197 tactccaccggtgaccgtcgccgccgggtgatccgcgaggcacgggatgaggaggaggac 256 |||||||| || ||||| || |||||||||||||||||||| ||| | |||||||||||| Sbjct: 488 tactccacgggcgaccgccggcgccgggtgatccgcgaggcgcggcaggaggaggaggac 429 Query: 257 gaggccttcctccgcaccctcaactttggggctgacccagacaacaaccccctgccccca 316 |||||||||||||||||||||||||| | || ||||| || |||||||||| ||| || Sbjct: 428 gaggccttcctccgcaccctcaacttcagcgccgacccggagaacaaccccccgccaccg 369 Query: 317 ccgccg 322 |||||| Sbjct: 368 ccgccg 363 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 438 ccatcggggagtcgctgatggagaagcttaagctgggcgacgc 480 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 247 ccatcggggaatcgctgatggagaagcttaagctgggcgacgc 205 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Minus Query: 374 gacatcctccgacgcgccgccgggaagcagc 404 |||||||||||||||||||||||||| |||| Sbjct: 299 gacatcctccgacgcgccgccgggaaacagc 269
>ref|NM_001036729.1| Arabidopsis thaliana unknown protein (AT4G38150) mRNA, complete cds Length = 1026 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 435 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 494 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 495 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 554 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 555 gtcgttgaggccttttgcaa 574
>ref|NM_119976.4| Arabidopsis thaliana unknown protein (AT4G38150) mRNA, complete cds Length = 1552 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 435 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 494 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 495 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 554 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 555 gtcgttgaggccttttgcaa 574
>gb|AY143852.1| Arabidopsis thaliana At4g38150/F20D10_270 mRNA, complete cds Length = 909 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 394 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 453 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 454 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 513 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 514 gtcgttgaggccttttgcaa 533
>gb|AY075695.1| Arabidopsis thaliana AT4g38150/F20D10_270 mRNA, complete cds Length = 1084 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 435 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 494 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 495 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 554 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 555 gtcgttgaggccttttgcaa 574
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 10666 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 10607 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 10606 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 10547 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 10546 gtcgttgaggccttttgcaa 10527
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 89744 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 89685 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 89684 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 89625 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 89624 gtcgttgaggccttttgcaa 89605
>dbj|AK119139.1| Arabidopsis thaliana At4g38150 mRNA for unknown protein, complete cds, clone: RAFL21-49-D05 Length = 1051 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 431 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 490 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 491 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 550 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 551 gtcgttgaggccttttgcaa 570
>emb|BX827341.1|CNS0A3MU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1509 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgcaagaacggattggtgccggaggccatg 658 |||||||||||||||||||| ||| |||||||||| | || | || | ||||||||| Sbjct: 418 cctaacgccgtcgccatgcttgacggcctctgcaaagatgggcttgtacaagaggccatg 477 Query: 659 aagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagct 718 ||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| ||| Sbjct: 478 aagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgct 537 Query: 719 gttgtcgaggccttctgcaa 738 || || |||||||| ||||| Sbjct: 538 gtcgttgaggccttttgcaa 557
>emb|BX827499.1|CNS0A2E9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1534 Score = 61.9 bits (31), Expect = 5e-06 Identities = 111/135 (82%), Gaps = 2/135 (1%) Strand = Plus / Plus Query: 599 cctaacgccgtcgccatgctcgacagcctctgc-aagaacggattggtgccggaggccat 657 |||||||||||||||||||| ||| |||||||| |||| || ||| | | |||||||| Sbjct: 418 cctaacgccgtcgccatgcttgacggcctctgcgaagatgggcttg-tacaagaggccat 476 Query: 658 gaagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacacagc 717 |||||| ||||| ||||||| || ||||| | ||||| || ||||| |||||||| || Sbjct: 477 gaagcttttcggattgatgcgtgacaagggtacaatccctgaggtcgttatctacactgc 536 Query: 718 tgttgtcgaggcctt 732 ||| || |||||||| Sbjct: 537 tgtcgttgaggcctt 551
>emb|CT985454.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 983 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Minus Query: 656 atgaagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacaca 715 |||||||| |||||||||||||| |||||||| | || ||||| || || || ||||| Sbjct: 375 atgaagcttttcggtctgatgcgggagaagggttctataccagaagtagttatatacact 316 Query: 716 gctgttgtcgaggccttctgcaaaggagccaagttggacgatgccgtcaggatcttcagg 775 ||||||||||| | |||||||||| ||||| || ||||| ||||| |||||| Sbjct: 315 gctgttgtcgaagggttctgcaaagcccaaaagtttgatgatgcaaagaggattttcagg 256 Query: 776 aagatgcagggcaacggggtcattccaaatgccttcag 813 |||||||| ||||||| ||| ||||||||| ||||| Sbjct: 255 aagatgcaaaacaacgggatcactccaaatgcattcag 218
>emb|CT982351.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 919 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Minus Query: 656 atgaagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacaca 715 |||||||| |||||||||||||| |||||||| | || ||||| || || || ||||| Sbjct: 375 atgaagcttttcggtctgatgcgggagaagggttctataccagaagtagttatatacact 316 Query: 716 gctgttgtcgaggccttctgcaaaggagccaagttggacgatgccgtcaggatcttcagg 775 ||||||||||| | |||||||||| ||||| || ||||| ||||| |||||| Sbjct: 315 gctgttgtcgaagggttctgcaaagcccaaaagtttgatgatgcaaagaggattttcagg 256 Query: 776 aagatgcagggcaacggggtcattccaaatgccttcag 813 |||||||| ||||||| ||| ||||||||| ||||| Sbjct: 255 aagatgcaaaacaacgggatcactccaaatgcattcag 218
>ref|NM_001058024.1| Oryza sativa (japonica cultivar-group) Os03g0786500 (Os03g0786500) mRNA, complete cds Length = 1471 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 245 gaggaggaggacgaggccttcctcc 269 ||||||||||||||||||||||||| Sbjct: 84 gaggaggaggacgaggccttcctcc 108
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Minus Query: 245 gaggaggaggacgaggccttcctcc 269 ||||||||||||||||||||||||| Sbjct: 8759 gaggaggaggacgaggccttcctcc 8735
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Minus Query: 245 gaggaggaggacgaggccttcctcc 269 ||||||||||||||||||||||||| Sbjct: 90398 gaggaggaggacgaggccttcctcc 90374
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Minus Query: 245 gaggaggaggacgaggccttcctcc 269 ||||||||||||||||||||||||| Sbjct: 32447141 gaggaggaggacgaggccttcctcc 32447117 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 11296951 cgccgccgggcagcagcagcagcagg 11296926 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 31711478 gcctccgccgcctcctcctgc 31711458
>dbj|AK106487.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H09, full insert sequence Length = 1471 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 245 gaggaggaggacgaggccttcctcc 269 ||||||||||||||||||||||||| Sbjct: 84 gaggaggaggacgaggccttcctcc 108
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1213 gtgatttgtatttctttgtgttta 1236 |||||||||||||||||||||||| Sbjct: 53002 gtgatttgtatttctttgtgttta 53025
>gb|AC189261.1| Brassica rapa subsp. pekinensis clone KBrB021P11, complete sequence Length = 116928 Score = 46.1 bits (23), Expect = 0.31 Identities = 68/83 (81%) Strand = Plus / Minus Query: 656 atgaagctgttcggtctgatgcgcgagaagggcgccatcccagatgtcgtcatctacaca 715 |||||||||||||| ||||||||| ||||| | ||||| || || || |||||||| Sbjct: 3905 atgaagctgttcgggtcgatgcgcgacaagggtacgatccctgaggtggttatctacact 3846 Query: 716 gctgttgtcgaggccttctgcaa 738 |||||||| |||| ||| ||||| Sbjct: 3845 gctgttgtggagggcttttgcaa 3823 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 764 aggatcttcaggaagatgcagggcaacggggtcattccaaatgccttcagtta 816 ||||| ||||||||||||||| ||| ||| | | ||||||||| |||||||| Sbjct: 3797 aggattttcaggaagatgcagagcagtgggattactccaaatgcgttcagtta 3745
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 142 acgcggcctccgccgcctcctcctgct 168 |||| |||||||||||||||||||||| Sbjct: 160777 acgccgcctccgccgcctcctcctgct 160751
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 142 acgcggcctccgccgcctcctcctgct 168 |||| |||||||||||||||||||||| Sbjct: 24092288 acgccgcctccgccgcctcctcctgct 24092262
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 143 cgcggcctccgccgcctcctcct 165 ||||||||||||||||||||||| Sbjct: 390927 cgcggcctccgccgcctcctcct 390949
>emb|CT830663.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128H09, full insert sequence Length = 1743 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 774 cgccgccgggcagcagcagcagcagg 799
>emb|CT834128.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128J02, full insert sequence Length = 1742 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 773 cgccgccgggcagcagcagcagcagg 798
>ref|NM_001056472.1| Oryza sativa (japonica cultivar-group) Os03g0315400 (Os03g0315400) mRNA, complete cds Length = 1641 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 674 cgccgccgggcagcagcagcagcagg 699
>ref|XM_001144198.1| PREDICTED: Pan troglodytes AHNAK nucleoprotein 2 (LOC741545), mRNA Length = 8614 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 8236 gccgggaagcagcagcagcagg 8215
>ref|XM_001132404.1| PREDICTED: Homo sapiens chromosome 14 open reading frame 78 (C14orf78), mRNA Length = 19674 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 19297 gccgggaagcagcagcagcagg 19276
>ref|XM_290629.7| PREDICTED: Homo sapiens chromosome 14 open reading frame 78, transcript variant 1 (C14orf78), mRNA Length = 15958 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 15580 gccgggaagcagcagcagcagg 15559
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence Length = 111678 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1008 ccattgatgagaagtccatcagggaa 1033 |||||||||||||| ||||||||||| Sbjct: 50621 ccattgatgagaaggccatcagggaa 50646
>gb|BC011859.2| Homo sapiens chromosome 14 open reading frame 78, mRNA (cDNA clone IMAGE:4309957), partial cds Length = 2058 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 1643 gccgggaagcagcagcagcagg 1622
>dbj|AK126472.1| Homo sapiens cDNA FLJ44508 fis, clone UTERU3001572, weakly similar to Neuroblast differentiation associated protein AHNAK Length = 4799 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 4423 gccgggaagcagcagcagcagg 4402
>dbj|AK095704.1| Homo sapiens cDNA FLJ38385 fis, clone FEBRA2003750 Length = 2117 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 1741 gccgggaagcagcagcagcagg 1720
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 79141 cgccgccgggcagcagcagcagcagg 79116
>gb|BC033372.1| Homo sapiens, clone IMAGE:4749202, mRNA, partial cds Length = 1948 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 1549 gccgggaagcagcagcagcagg 1528
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 8485 cgccgccgggcagcagcagcagcagg 8460
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 cgcgccgccgggaagcagcagc 407 |||||||||||||||||||||| Sbjct: 38937 cgcgccgccgggaagcagcagc 38958
>dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B13, full insert sequence Length = 1645 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 388 cgccgccgggaagcagcagcagcagg 413 |||||||||| ||||||||||||||| Sbjct: 675 cgccgccgggcagcagcagcagcagg 700
>dbj|AB095939.1| Homo sapiens mRNA for KIAA2019 protein Length = 9217 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 8841 gccgggaagcagcagcagcagg 8820
>emb|BX538133.1|HSM806334 Homo sapiens mRNA; cDNA DKFZp686A24131 (from clone DKFZp686A24131) Length = 3911 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 3484 gccgggaagcagcagcagcagg 3463
>emb|BX538106.1|HSM806297 Homo sapiens mRNA; cDNA DKFZp686J02145 (from clone DKFZp686J02145) Length = 4458 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 4063 gccgggaagcagcagcagcagg 4042
>emb|BX538040.1|HSM806209 Homo sapiens mRNA; cDNA DKFZp686E13145 (from clone DKFZp686E13145) Length = 3992 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 3597 gccgggaagcagcagcagcagg 3576
>emb|BX537923.1|HSM806037 Homo sapiens mRNA; cDNA DKFZp686I19147 (from clone DKFZp686I19147) Length = 4218 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 3823 gccgggaagcagcagcagcagg 3802
>gb|BC090889.1| Homo sapiens chromosome 14 open reading frame 78, mRNA (cDNA clone IMAGE:30387958), complete cds Length = 3572 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 3059 gccgggaagcagcagcagcagg 3038
>gb|BC049216.1| Homo sapiens chromosome 14 open reading frame 78, mRNA (cDNA clone IMAGE:5502765), complete cds Length = 2373 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 1983 gccgggaagcagcagcagcagg 1962
>emb|AL512802.2|CNS07EFG Human chromosome 14 DNA sequence BAC C-2319J18 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 97862 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 18937 gccgggaagcagcagcagcagg 18958
>emb|AL834367.1|HSM805437 Homo sapiens mRNA; cDNA DKFZp762K0712 (from clone DKFZp762K0712) Length = 3369 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gccgggaagcagcagcagcagg 413 |||||||||||||||||||||| Sbjct: 2985 gccgggaagcagcagcagcagg 2964
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 603 acgccgtcgccatgctcgaca 623 ||||||||||||||||||||| Sbjct: 2590341 acgccgtcgccatgctcgaca 2590321
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 gcggcctccgccgcctcctcc 164 ||||||||||||||||||||| Sbjct: 3743391 gcggcctccgccgcctcctcc 3743411
>dbj|AK240892.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065030K10, full insert sequence Length = 2756 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 1505 gcctccgccgcctcctcctgc 1485
>dbj|AK241712.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065197H24, full insert sequence Length = 2375 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 1541 gcctccgccgcctcctcctgc 1521
>ref|NM_001068794.1| Oryza sativa (japonica cultivar-group) Os08g0519400 (Os08g0519400) mRNA, complete cds Length = 1918 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 277 gcctccgccgcctcctcctgc 257
>ref|NM_001065341.1| Oryza sativa (japonica cultivar-group) Os07g0124700 (Os07g0124700) mRNA, partial cds Length = 1434 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 358 gcctccgccgcctcctcctgc 338
>ref|NM_001057938.1| Oryza sativa (japonica cultivar-group) Os03g0770700 (Os03g0770700) mRNA, complete cds Length = 1908 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 1280 gcctccgccgcctcctcctgc 1260
>ref|NM_001051638.1| Oryza sativa (japonica cultivar-group) Os01g0899800 (Os01g0899800) mRNA, complete cds Length = 2079 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 1265 gcctccgccgcctcctcctgc 1245
>ref|NM_001050212.1| Oryza sativa (japonica cultivar-group) Os01g0640000 (Os01g0640000) mRNA, complete cds Length = 4983 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ccgggaagcagcagcagcagg 413 ||||||||||||||||||||| Sbjct: 28 ccgggaagcagcagcagcagg 8
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete sequence Length = 292102 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 caaccccctgcccccaccgcc 321 ||||||||||||||||||||| Sbjct: 94818 caaccccctgcccccaccgcc 94838
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gacaaggtagggagagatgag 120 ||||||||||||||||||||| Sbjct: 106818 gacaaggtagggagagatgag 106798
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gaggaggaggacgaggccttc 265 ||||||||||||||||||||| Sbjct: 501038 gaggaggaggacgaggccttc 501058
>ref|XM_614269.2| PREDICTED: Bos taurus filamin A, alpha (actin binding protein 280) (FLNA), mRNA Length = 8082 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gggatgaggaggaggacgagg 260 ||||||||||||||||||||| Sbjct: 588 gggatgaggaggaggacgagg 608
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 59705 gcctccgccgcctcctcctgc 59725
>gb|AC123819.2| Mus musculus BAC clone RP23-460M11 from chromosome 8, complete sequence Length = 202899 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1216 atttgtatttctttgtgttta 1236 ||||||||||||||||||||| Sbjct: 14558 atttgtatttctttgtgttta 14578
>gb|AC124351.3| Mus musculus BAC clone RP24-467D20 from chromosome 8, complete sequence Length = 122811 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1216 atttgtatttctttgtgttta 1236 ||||||||||||||||||||| Sbjct: 92471 atttgtatttctttgtgttta 92491
>gb|AY062180.1| Oryza sativa ovule development aintegumenta-like protein BNM3 (BNM3) gene, complete cds Length = 4024 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 2613 gcctccgccgcctcctcctgc 2593
>emb|AJ427960.1|ABI427960 Adalia bipunctata microsatellite DNA, clone Ab37 Length = 474 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 cggcctccgccgcctcctcct 165 ||||||||||||||||||||| Sbjct: 230 cggcctccgccgcctcctcct 250
>emb|AJ427954.1|ABI427954 Adalia bipunctata microsatellite DNA, clone Ab31 Length = 425 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 cggcctccgccgcctcctcct 165 ||||||||||||||||||||| Sbjct: 200 cggcctccgccgcctcctcct 180
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gacaaggtagggagagatgag 120 ||||||||||||||||||||| Sbjct: 1751811 gacaaggtagggagagatgag 1751791 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 catcctccgacgcgccgccgggaag 400 |||||||||| |||||||||||||| Sbjct: 2161328 catcctccgatgcgccgccgggaag 2161352
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 25796523 gcctccgccgcctcctcctgc 25796543
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgggaagcagcagcagcaggg 414 ||||||||||||||||||||| Sbjct: 10298882 cgggaagcagcagcagcaggg 10298902
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 1302223 gcctccgccgcctcctcctgc 1302203
>gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, complete sequence Length = 155323 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 gggacaaggtagggagagatg 118 ||||||||||||||||||||| Sbjct: 67886 gggacaaggtagggagagatg 67906
>emb|CR457484.9| Zebrafish DNA sequence from clone CH211-132F3 in linkage group 18, complete sequence Length = 169672 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1027 cagggaacatttggacaagaa 1047 ||||||||||||||||||||| Sbjct: 145421 cagggaacatttggacaagaa 145441
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 11400 gcctccgccgcctcctcctgc 11420
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgggaagcagcagcagcaggg 414 ||||||||||||||||||||| Sbjct: 6587 cgggaagcagcagcagcaggg 6607
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ccgggaagcagcagcagcagg 413 ||||||||||||||||||||| Sbjct: 4515 ccgggaagcagcagcagcagg 4495
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ccgggaagcagcagcagcagg 413 ||||||||||||||||||||| Sbjct: 148857 ccgggaagcagcagcagcagg 148837
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 68734 gcctccgccgcctcctcctgc 68754
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 67058 gcctccgccgcctcctcctgc 67038
>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full insert sequence Length = 1440 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 358 gcctccgccgcctcctcctgc 338
>dbj|AK109201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C03, full insert sequence Length = 898 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 329 gcctccgccgcctcctcctgc 349
>dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N10, full insert sequence Length = 1922 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcctccgccgcctcctcctgc 167 ||||||||||||||||||||| Sbjct: 280 gcctccgccgcctcctcctgc 260
>ref|XM_838124.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1040) partial mRNA Length = 3150 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gaggaggaggacgaggccttc 265 ||||||||||||||||||||| Sbjct: 1657 gaggaggaggacgaggccttc 1677
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 catcctccgacgcgccgccgggaag 400 |||||||||| |||||||||||||| Sbjct: 58022 catcctccgatgcgccgccgggaag 58046
>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete sequence Length = 184866 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 caaccccctgcccccaccgcc 321 ||||||||||||||||||||| Sbjct: 43400 caaccccctgcccccaccgcc 43380 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 226,638,970 Number of extensions: 14026305 Number of successful extensions: 482102 Number of sequences better than 10.0: 87 Number of HSP's gapped: 482094 Number of HSP's successfully gapped: 119 Length of query: 1282 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1259 Effective length of database: 18,503,978,556 Effective search space: 23296509002004 Effective search space used: 23296509002004 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)