ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94i06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831137.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA220O22, full insert sequence Length = 2583 Score = 204 bits (103), Expect = 1e-48 Identities = 403/503 (80%) Strand = Plus / Plus Query: 1507 gacaaggatgatcttctcattgtcaactgcttgttccgaatgcggcacatgatggacgag 1566 ||||||||||| ||||| |||| |||||| | ||||| ||| | ||||||||||||| Sbjct: 1908 gacaaggatgaacttcttgttgttaactgccttttccggatgagaaacatgatggacgaa 1967 Query: 1567 acggtgacagaagagagcccgaggatgacagtcttgaacacaatcaggaggatgaaccca 1626 | ||||||||| || ||||| || ||| || |||| ||||| || | |||||| ||| Sbjct: 1968 atggtgacagatgacagcccaagaatgcaggttctgaagacaataagaaagatgaatcca 2027 Query: 1627 catctgttcatccacgcggtcgtcaatggcaccttcaacgcgccgttcttcgtgacgcgc 1686 || |||||||||| | || ||||||||||||| ||| ||||| ||||||||||| || Sbjct: 2028 aatttgttcatccatggcgttgtcaatggcacctacaatgcgcccttcttcgtgacacga 2087 Query: 1687 tttaaggaggctctcttctacttctcttcacacttcgacatgctcgaggcgaccgcaccg 1746 || ||||||||| | ||||||| |||||||| || || ||||| || | || || | Sbjct: 2088 ttcaaggaggctttgttctactactcttcactttttgatatgcttgaaacaactgcttca 2147 Query: 1747 ccggtggacgaacacaggcagctgatcgaaagggaatacttcggacgggaagccctcaac 1806 | ||| |||||| |||||| |||||| ||||| || |||||| |||||||| || || Sbjct: 2148 cgggtcgacgaaaacaggctgctgatagaaagagatctcttcggccgggaagctcttaat 2207 Query: 1807 gtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaagcaatggcag 1866 ||||| ||||| |||||||| ||||| || || || || ||||| ||||||||||||||| Sbjct: 2208 gtggttgcttgtgagggcactgagagagtagaaagaccagagacgtacaagcaatggcag 2267 Query: 1867 gtaaggaacctcagggcagggttcaggcaggtacctctgcttcaagagacggtgaaaaaa 1926 || |||||| |||||||||| |||| |||| |||| ||| |||||||||||||| || Sbjct: 2268 gtgaggaacatcagggcaggcttcaagcagctaccactgaaccaagagacggtgaagaag 2327 Query: 1927 gcaagatacaaggtaaccaagagctatcacaaggatttcttcgtcgacgaagataacaag 1986 |||||||||||||| | || ||| |||| ||||||| | || |||||||||||||| Sbjct: 2328 gcaagatacaaggtgaagaaatcctaccacagggatttcctagttgacgaagataacaaa 2387 Query: 1987 tggatgttgcagggttggaaggg 2009 |||||| |||| ||||||||||| Sbjct: 2388 tggatgctgcaaggttggaaggg 2410 Score = 93.7 bits (47), Expect = 3e-15 Identities = 185/231 (80%) Strand = Plus / Plus Query: 1155 attcaagctgtatgggactgcatgcccgttcttgagaatgttcaggttctactcgaatga 1214 |||||||||||||| || |||||||||||| || ||| | | |||| ||||| || Sbjct: 1550 attcaagctgtatgttacagcatgcccgttcaagaaaatatcgaacttcttctcgatcga 1609 Query: 1215 agccatcttggatgctgccaagggtgtgacaagcgtgcacattctggactacggtataga 1274 |||||||||| | || |||||||| ||||||| |||||||| | ||||| |||||| | Sbjct: 1610 agccatcttgaacgcatccaagggtatgacaaggttgcacattgttgactatggtataca 1669 Query: 1275 ctggggcttccagtggccaatcttcctgcagaggatctcgaagagagatggcggcccccc 1334 | || |||||||||||||||||| | ||| |||||||||||||| ||| ||||| || Sbjct: 1670 gtatggattccagtggccaatcttcttccagcggatctcgaagagacctggtggccctcc 1729 Query: 1335 aagaatccgaatcaccggcattgacttgccgcagccagggttccggcctgc 1385 ||| | ||||||||||| ||||||| || ||||| || ||||| ||||| Sbjct: 1730 aagtgttcgaatcaccggtgttgacttaccacagccgggattccgccctgc 1780 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 949 gcccaggccgcggccatcgatgatcaccg 977 ||||||||||| || |||||||||||||| Sbjct: 1344 gcccaggccgctgcaatcgatgatcaccg 1372
>ref|NM_001060241.1| Oryza sativa (japonica cultivar-group) Os04g0590400 (Os04g0590400) mRNA, complete cds Length = 2562 Score = 204 bits (103), Expect = 1e-48 Identities = 403/503 (80%) Strand = Plus / Plus Query: 1507 gacaaggatgatcttctcattgtcaactgcttgttccgaatgcggcacatgatggacgag 1566 ||||||||||| ||||| |||| |||||| | ||||| ||| | ||||||||||||| Sbjct: 1692 gacaaggatgaacttcttgttgttaactgccttttccggatgagaaacatgatggacgaa 1751 Query: 1567 acggtgacagaagagagcccgaggatgacagtcttgaacacaatcaggaggatgaaccca 1626 | ||||||||| || ||||| || ||| || |||| ||||| || | |||||| ||| Sbjct: 1752 atggtgacagatgacagcccaagaatgcaggttctgaagacaataagaaagatgaatcca 1811 Query: 1627 catctgttcatccacgcggtcgtcaatggcaccttcaacgcgccgttcttcgtgacgcgc 1686 || |||||||||| | || ||||||||||||| ||| ||||| ||||||||||| || Sbjct: 1812 aatttgttcatccatggcgttgtcaatggcacctacaatgcgcccttcttcgtgacacga 1871 Query: 1687 tttaaggaggctctcttctacttctcttcacacttcgacatgctcgaggcgaccgcaccg 1746 || ||||||||| | ||||||| |||||||| || || ||||| || | || || | Sbjct: 1872 ttcaaggaggctttgttctactactcttcactttttgatatgcttgaaacaactgcttca 1931 Query: 1747 ccggtggacgaacacaggcagctgatcgaaagggaatacttcggacgggaagccctcaac 1806 | ||| |||||| |||||| |||||| ||||| || |||||| |||||||| || || Sbjct: 1932 cgggtcgacgaaaacaggctgctgatagaaagagatctcttcggccgggaagctcttaat 1991 Query: 1807 gtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaagcaatggcag 1866 ||||| ||||| |||||||| ||||| || || || || ||||| ||||||||||||||| Sbjct: 1992 gtggttgcttgtgagggcactgagagagtagaaagaccagagacgtacaagcaatggcag 2051 Query: 1867 gtaaggaacctcagggcagggttcaggcaggtacctctgcttcaagagacggtgaaaaaa 1926 || |||||| |||||||||| |||| |||| |||| ||| |||||||||||||| || Sbjct: 2052 gtgaggaacatcagggcaggcttcaagcagctaccactgaaccaagagacggtgaagaag 2111 Query: 1927 gcaagatacaaggtaaccaagagctatcacaaggatttcttcgtcgacgaagataacaag 1986 |||||||||||||| | || ||| |||| ||||||| | || |||||||||||||| Sbjct: 2112 gcaagatacaaggtgaagaaatcctaccacagggatttcctagttgacgaagataacaaa 2171 Query: 1987 tggatgttgcagggttggaaggg 2009 |||||| |||| ||||||||||| Sbjct: 2172 tggatgctgcaaggttggaaggg 2194 Score = 93.7 bits (47), Expect = 3e-15 Identities = 185/231 (80%) Strand = Plus / Plus Query: 1155 attcaagctgtatgggactgcatgcccgttcttgagaatgttcaggttctactcgaatga 1214 |||||||||||||| || |||||||||||| || ||| | | |||| ||||| || Sbjct: 1334 attcaagctgtatgttacagcatgcccgttcaagaaaatatcgaacttcttctcgatcga 1393 Query: 1215 agccatcttggatgctgccaagggtgtgacaagcgtgcacattctggactacggtataga 1274 |||||||||| | || |||||||| ||||||| |||||||| | ||||| |||||| | Sbjct: 1394 agccatcttgaacgcatccaagggtatgacaaggttgcacattgttgactatggtataca 1453 Query: 1275 ctggggcttccagtggccaatcttcctgcagaggatctcgaagagagatggcggcccccc 1334 | || |||||||||||||||||| | ||| |||||||||||||| ||| ||||| || Sbjct: 1454 gtatggattccagtggccaatcttcttccagcggatctcgaagagacctggtggccctcc 1513 Query: 1335 aagaatccgaatcaccggcattgacttgccgcagccagggttccggcctgc 1385 ||| | ||||||||||| ||||||| || ||||| || ||||| ||||| Sbjct: 1514 aagtgttcgaatcaccggtgttgacttaccacagccgggattccgccctgc 1564 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 949 gcccaggccgcggccatcgatgatcaccg 977 ||||||||||| || |||||||||||||| Sbjct: 1128 gcccaggccgctgcaatcgatgatcaccg 1156
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 204 bits (103), Expect = 1e-48 Identities = 403/503 (80%) Strand = Plus / Plus Query: 1507 gacaaggatgatcttctcattgtcaactgcttgttccgaatgcggcacatgatggacgag 1566 ||||||||||| ||||| |||| |||||| | ||||| ||| | ||||||||||||| Sbjct: 29832642 gacaaggatgaacttcttgttgttaactgccttttccggatgagaaacatgatggacgaa 29832701 Query: 1567 acggtgacagaagagagcccgaggatgacagtcttgaacacaatcaggaggatgaaccca 1626 | ||||||||| || ||||| || ||| || |||| ||||| || | |||||| ||| Sbjct: 29832702 atggtgacagatgacagcccaagaatgcaggttctgaagacaataagaaagatgaatcca 29832761 Query: 1627 catctgttcatccacgcggtcgtcaatggcaccttcaacgcgccgttcttcgtgacgcgc 1686 || |||||||||| | || ||||||||||||| ||| ||||| ||||||||||| || Sbjct: 29832762 aatttgttcatccatggcgttgtcaatggcacctacaatgcgcccttcttcgtgacacga 29832821 Query: 1687 tttaaggaggctctcttctacttctcttcacacttcgacatgctcgaggcgaccgcaccg 1746 || ||||||||| | ||||||| |||||||| || || ||||| || | || || | Sbjct: 29832822 ttcaaggaggctttgttctactactcttcactttttgatatgcttgaaacaactgcttca 29832881 Query: 1747 ccggtggacgaacacaggcagctgatcgaaagggaatacttcggacgggaagccctcaac 1806 | ||| |||||| |||||| |||||| ||||| || |||||| |||||||| || || Sbjct: 29832882 cgggtcgacgaaaacaggctgctgatagaaagagatctcttcggccgggaagctcttaat 29832941 Query: 1807 gtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaagcaatggcag 1866 ||||| ||||| |||||||| ||||| || || || || ||||| ||||||||||||||| Sbjct: 29832942 gtggttgcttgtgagggcactgagagagtagaaagaccagagacgtacaagcaatggcag 29833001 Query: 1867 gtaaggaacctcagggcagggttcaggcaggtacctctgcttcaagagacggtgaaaaaa 1926 || |||||| |||||||||| |||| |||| |||| ||| |||||||||||||| || Sbjct: 29833002 gtgaggaacatcagggcaggcttcaagcagctaccactgaaccaagagacggtgaagaag 29833061 Query: 1927 gcaagatacaaggtaaccaagagctatcacaaggatttcttcgtcgacgaagataacaag 1986 |||||||||||||| | || ||| |||| ||||||| | || |||||||||||||| Sbjct: 29833062 gcaagatacaaggtgaagaaatcctaccacagggatttcctagttgacgaagataacaaa 29833121 Query: 1987 tggatgttgcagggttggaaggg 2009 |||||| |||| ||||||||||| Sbjct: 29833122 tggatgctgcaaggttggaaggg 29833144 Score = 93.7 bits (47), Expect = 3e-15 Identities = 185/231 (80%) Strand = Plus / Plus Query: 1155 attcaagctgtatgggactgcatgcccgttcttgagaatgttcaggttctactcgaatga 1214 |||||||||||||| || |||||||||||| || ||| | | |||| ||||| || Sbjct: 29832284 attcaagctgtatgttacagcatgcccgttcaagaaaatatcgaacttcttctcgatcga 29832343 Query: 1215 agccatcttggatgctgccaagggtgtgacaagcgtgcacattctggactacggtataga 1274 |||||||||| | || |||||||| ||||||| |||||||| | ||||| |||||| | Sbjct: 29832344 agccatcttgaacgcatccaagggtatgacaaggttgcacattgttgactatggtataca 29832403 Query: 1275 ctggggcttccagtggccaatcttcctgcagaggatctcgaagagagatggcggcccccc 1334 | || |||||||||||||||||| | ||| |||||||||||||| ||| ||||| || Sbjct: 29832404 gtatggattccagtggccaatcttcttccagcggatctcgaagagacctggtggccctcc 29832463 Query: 1335 aagaatccgaatcaccggcattgacttgccgcagccagggttccggcctgc 1385 ||| | ||||||||||| ||||||| || ||||| || ||||| ||||| Sbjct: 29832464 aagtgttcgaatcaccggtgttgacttaccacagccgggattccgccctgc 29832514 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Plus Query: 423 tgctcccgccgccgccgcgccggc 446 |||||||||||||||||||||||| Sbjct: 28468896 tgctcccgccgccgccgcgccggc 28468919 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 423 tgctcccgccgccgccgcgccggc 446 |||||||||||||||||||||||| Sbjct: 30024621 tgctcccgccgccgccgcgccggc 30024598 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 949 gcccaggccgcggccatcgatgatcaccg 977 ||||||||||| || |||||||||||||| Sbjct: 29832078 gcccaggccgctgcaatcgatgatcaccg 29832106
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 204 bits (103), Expect = 1e-48 Identities = 403/503 (80%) Strand = Plus / Plus Query: 1507 gacaaggatgatcttctcattgtcaactgcttgttccgaatgcggcacatgatggacgag 1566 ||||||||||| ||||| |||| |||||| | ||||| ||| | ||||||||||||| Sbjct: 113568 gacaaggatgaacttcttgttgttaactgccttttccggatgagaaacatgatggacgaa 113627 Query: 1567 acggtgacagaagagagcccgaggatgacagtcttgaacacaatcaggaggatgaaccca 1626 | ||||||||| || ||||| || ||| || |||| ||||| || | |||||| ||| Sbjct: 113628 atggtgacagatgacagcccaagaatgcaggttctgaagacaataagaaagatgaatcca 113687 Query: 1627 catctgttcatccacgcggtcgtcaatggcaccttcaacgcgccgttcttcgtgacgcgc 1686 || |||||||||| | || ||||||||||||| ||| ||||| ||||||||||| || Sbjct: 113688 aatttgttcatccatggcgttgtcaatggcacctacaatgcgcccttcttcgtgacacga 113747 Query: 1687 tttaaggaggctctcttctacttctcttcacacttcgacatgctcgaggcgaccgcaccg 1746 || ||||||||| | ||||||| |||||||| || || ||||| || | || || | Sbjct: 113748 ttcaaggaggctttgttctactactcttcactttttgatatgcttgaaacaactgcttca 113807 Query: 1747 ccggtggacgaacacaggcagctgatcgaaagggaatacttcggacgggaagccctcaac 1806 | ||| |||||| |||||| |||||| ||||| || |||||| |||||||| || || Sbjct: 113808 cgggtcgacgaaaacaggctgctgatagaaagagatctcttcggccgggaagctcttaat 113867 Query: 1807 gtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaagcaatggcag 1866 ||||| ||||| |||||||| ||||| || || || || ||||| ||||||||||||||| Sbjct: 113868 gtggttgcttgtgagggcactgagagagtagaaagaccagagacgtacaagcaatggcag 113927 Query: 1867 gtaaggaacctcagggcagggttcaggcaggtacctctgcttcaagagacggtgaaaaaa 1926 || |||||| |||||||||| |||| |||| |||| ||| |||||||||||||| || Sbjct: 113928 gtgaggaacatcagggcaggcttcaagcagctaccactgaaccaagagacggtgaagaag 113987 Query: 1927 gcaagatacaaggtaaccaagagctatcacaaggatttcttcgtcgacgaagataacaag 1986 |||||||||||||| | || ||| |||| ||||||| | || |||||||||||||| Sbjct: 113988 gcaagatacaaggtgaagaaatcctaccacagggatttcctagttgacgaagataacaaa 114047 Query: 1987 tggatgttgcagggttggaaggg 2009 |||||| |||| ||||||||||| Sbjct: 114048 tggatgctgcaaggttggaaggg 114070 Score = 93.7 bits (47), Expect = 3e-15 Identities = 185/231 (80%) Strand = Plus / Plus Query: 1155 attcaagctgtatgggactgcatgcccgttcttgagaatgttcaggttctactcgaatga 1214 |||||||||||||| || |||||||||||| || ||| | | |||| ||||| || Sbjct: 113210 attcaagctgtatgttacagcatgcccgttcaagaaaatatcgaacttcttctcgatcga 113269 Query: 1215 agccatcttggatgctgccaagggtgtgacaagcgtgcacattctggactacggtataga 1274 |||||||||| | || |||||||| ||||||| |||||||| | ||||| |||||| | Sbjct: 113270 agccatcttgaacgcatccaagggtatgacaaggttgcacattgttgactatggtataca 113329 Query: 1275 ctggggcttccagtggccaatcttcctgcagaggatctcgaagagagatggcggcccccc 1334 | || |||||||||||||||||| | ||| |||||||||||||| ||| ||||| || Sbjct: 113330 gtatggattccagtggccaatcttcttccagcggatctcgaagagacctggtggccctcc 113389 Query: 1335 aagaatccgaatcaccggcattgacttgccgcagccagggttccggcctgc 1385 ||| | ||||||||||| ||||||| || ||||| || ||||| ||||| Sbjct: 113390 aagtgttcgaatcaccggtgttgacttaccacagccgggattccgccctgc 113440 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 949 gcccaggccgcggccatcgatgatcaccg 977 ||||||||||| || |||||||||||||| Sbjct: 113004 gcccaggccgctgcaatcgatgatcaccg 113032
>dbj|AK100784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120N07, full insert sequence Length = 2565 Score = 196 bits (99), Expect = 3e-46 Identities = 402/503 (79%) Strand = Plus / Plus Query: 1507 gacaaggatgatcttctcattgtcaactgcttgttccgaatgcggcacatgatggacgag 1566 ||||||||||| ||||| |||| |||||| | ||||| ||| | ||||||||||||| Sbjct: 1694 gacaaggatgaacttcttgttgttaactgccttttccggatgagaaacatgatggacgaa 1753 Query: 1567 acggtgacagaagagagcccgaggatgacagtcttgaacacaatcaggaggatgaaccca 1626 | ||||||||| || ||||| || ||| || |||| ||||| || |||||| ||| Sbjct: 1754 atggtgacagatgacagcccaagaatgcaggttctgaagacaataagagagatgaatcca 1813 Query: 1627 catctgttcatccacgcggtcgtcaatggcaccttcaacgcgccgttcttcgtgacgcgc 1686 || |||||||||| | || ||||||||||||| ||| ||||| ||||||||||| || Sbjct: 1814 aatttgttcatccatggcgttgtcaatggcacctacaatgcgcccttcttcgtgacacga 1873 Query: 1687 tttaaggaggctctcttctacttctcttcacacttcgacatgctcgaggcgaccgcaccg 1746 || ||||||||| | ||||||| |||||||| || || ||||| || | || || | Sbjct: 1874 ttcaaggaggctttgttctactactcttcactttttgatatgcttgaaacaactgcttca 1933 Query: 1747 ccggtggacgaacacaggcagctgatcgaaagggaatacttcggacgggaagccctcaac 1806 | ||| |||||| |||||| |||||| ||||| || |||||| |||||||| || || Sbjct: 1934 cgggtcgacgaaaacaggctgctgatagaaagagatctcttcggccgggaagctcttaat 1993 Query: 1807 gtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaagcaatggcag 1866 ||||| ||||| |||||||| ||||| || || || || ||||| ||||||||||||||| Sbjct: 1994 gtggttgcttgtgagggcactgagagagtagaaagaccagagacgtacaagcaatggcag 2053 Query: 1867 gtaaggaacctcagggcagggttcaggcaggtacctctgcttcaagagacggtgaaaaaa 1926 || |||||| |||||||||| |||| |||| |||| ||| |||||||||||||| || Sbjct: 2054 gtgaggaacatcagggcaggcttcaagcagctaccactgaaccaagagacggtgaagaag 2113 Query: 1927 gcaagatacaaggtaaccaagagctatcacaaggatttcttcgtcgacgaagataacaag 1986 |||||||||||||| | || ||| |||| ||||||| | || |||||||||||||| Sbjct: 2114 gcaagatacaaggtgaagaaatcctaccacagggatttcctagttgacgaagataacaaa 2173 Query: 1987 tggatgttgcagggttggaaggg 2009 |||||| |||| ||||||||||| Sbjct: 2174 tggatgctgcaaggttggaaggg 2196 Score = 93.7 bits (47), Expect = 3e-15 Identities = 185/231 (80%) Strand = Plus / Plus Query: 1155 attcaagctgtatgggactgcatgcccgttcttgagaatgttcaggttctactcgaatga 1214 |||||||||||||| || |||||||||||| || ||| | | |||| ||||| || Sbjct: 1336 attcaagctgtatgttacagcatgcccgttcaagaaaatatcgaacttcttctcgatcga 1395 Query: 1215 agccatcttggatgctgccaagggtgtgacaagcgtgcacattctggactacggtataga 1274 |||||||||| | || |||||||| ||||||| |||||||| | ||||| |||||| | Sbjct: 1396 agccatcttgaacgcatccaagggtatgacaaggttgcacattgttgactatggtataca 1455 Query: 1275 ctggggcttccagtggccaatcttcctgcagaggatctcgaagagagatggcggcccccc 1334 | || |||||||||||||||||| | ||| |||||||||||||| ||| ||||| || Sbjct: 1456 gtatggattccagtggccaatcttcttccagcggatctcgaagagacctggtggccctcc 1515 Query: 1335 aagaatccgaatcaccggcattgacttgccgcagccagggttccggcctgc 1385 ||| | ||||||||||| ||||||| || ||||| || ||||| ||||| Sbjct: 1516 aagtgttcgaatcaccggtgttgacttaccacagccgggattccgccctgc 1566 Score = 42.1 bits (21), Expect = 9.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 949 gcccaggccgcggccatcgatgatcaccg 977 ||||||||||| || |||||||||||||| Sbjct: 1130 gcccaggccgctgcaatcgatgatcaccg 1158
>dbj|AB106274.2| Lilium longiflorum LlSCL mRNA for SCARECROW-like protein, complete cds Length = 2597 Score = 73.8 bits (37), Expect = 3e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 1811 tcgcttgcgagggcacggagagggtcgagaggccggagacctacaagcaatggcaggtaa 1870 |||| |||||||| || || ||||| |||||||| ||||| |||||||| |||||||||| Sbjct: 2187 tcgcctgcgagggaacagaaagggtggagaggccagagacatacaagcagtggcaggtaa 2246 Query: 1871 ggaacctcagggcagggttca 1891 ||||| || |||| ||||||| Sbjct: 2247 ggaacttccgggctgggttca 2267
>ref|NM_001075081.1| Oryza sativa (japonica cultivar-group) Os11g0705800 (Os11g0705800) mRNA, complete cds Length = 1926 Score = 65.9 bits (33), Expect = 6e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 1666 gcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcgac 1725 ||||| ||||||||||||||||| | |||||||||||||| || ||| | ||||||||| Sbjct: 1528 gcgcccttcttcgtgacgcgcttcagggaggctctcttcttctactcggcgcacttcgac 1587 Query: 1726 atgct 1730 ||||| Sbjct: 1588 atgct 1592 Score = 46.1 bits (23), Expect = 0.59 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1798 gccctcaacgtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaag 1857 ||||||||||| |||| ||||||||| | || || || || |||||||||| |||||| Sbjct: 1660 gccctcaacgtcatcgcctgcgagggcgcagacagagttgatcggccggagacgtacaag 1719 Query: 1858 caatggcaggt 1868 || |||||||| Sbjct: 1720 cagtggcaggt 1730
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 65.9 bits (33), Expect = 6e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 1666 gcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcgac 1725 ||||| ||||||||||||||||| | |||||||||||||| || ||| | ||||||||| Sbjct: 63173 gcgcccttcttcgtgacgcgcttcagggaggctctcttcttctactcggcgcacttcgac 63232 Query: 1726 atgct 1730 ||||| Sbjct: 63233 atgct 63237 Score = 46.1 bits (23), Expect = 0.59 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1798 gccctcaacgtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaag 1857 ||||||||||| |||| ||||||||| | || || || || |||||||||| |||||| Sbjct: 63305 gccctcaacgtcatcgcctgcgagggcgcagacagagttgatcggccggagacgtacaag 63364 Query: 1858 caatggcaggt 1868 || |||||||| Sbjct: 63365 cagtggcaggt 63375 Score = 44.1 bits (22), Expect = 2.3 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1665 cgcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcga 1724 |||||| |||||| |||||||||| | |||| | ||||||| || ||| || || ||||| Sbjct: 45850 cgcgcccttcttcctgacgcgcttcagggagacgctcttcttctactcgtcgcagttcga 45909 Query: 1725 catgct 1730 |||||| Sbjct: 45910 catgct 45915
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 65.9 bits (33), Expect = 6e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 1666 gcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcgac 1725 ||||| ||||||||||||||||| | |||||||||||||| || ||| | ||||||||| Sbjct: 28258371 gcgcccttcttcgtgacgcgcttcagggaggctctcttcttctactcggcgcacttcgac 28258430 Query: 1726 atgct 1730 ||||| Sbjct: 28258431 atgct 28258435 Score = 46.1 bits (23), Expect = 0.59 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1798 gccctcaacgtggtcgcttgcgagggcacggagagggtcgagaggccggagacctacaag 1857 ||||||||||| |||| ||||||||| | || || || || |||||||||| |||||| Sbjct: 28258503 gccctcaacgtcatcgcctgcgagggcgcagacagagttgatcggccggagacgtacaag 28258562 Query: 1858 caatggcaggt 1868 || |||||||| Sbjct: 28258563 cagtggcaggt 28258573 Score = 44.1 bits (22), Expect = 2.3 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1665 cgcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcga 1724 |||||| |||||| |||||||||| | |||| | ||||||| || ||| || || ||||| Sbjct: 28240832 cgcgcccttcttcctgacgcgcttcagggagacgctcttcttctactcgtcgcagttcga 28240891 Query: 1725 catgct 1730 |||||| Sbjct: 28240892 catgct 28240897 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 8986481 tcctcctcgacgacgacgacgacga 8986457
>ref|NM_001051306.1| Oryza sativa (japonica cultivar-group) Os01g0842200 (Os01g0842200) mRNA, complete cds Length = 3035 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1827 ggagagggtcgagaggccggagacctacaagcaatggcaggtaaggaacc 1876 ||||||| | |||||||| ||||| |||||||||||||||||| |||||| Sbjct: 2404 ggagaggatggagaggccagagacatacaagcaatggcaggtacggaacc 2453 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1600 ttgaacacaatcaggaggatgaacccacatctgttcat 1637 ||||| ||||| |||| ||||||||||||| ||||||| Sbjct: 2177 ttgaagacaattaggaagatgaacccacatgtgttcat 2214
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1827 ggagagggtcgagaggccggagacctacaagcaatggcaggtaaggaacc 1876 ||||||| | |||||||| ||||| |||||||||||||||||| |||||| Sbjct: 36154135 ggagaggatggagaggccagagacatacaagcaatggcaggtacggaacc 36154184 Score = 46.1 bits (23), Expect = 0.59 Identities = 23/23 (100%) Strand = Plus / Minus Query: 428 ccgccgccgccgcgccggcgcgg 450 ||||||||||||||||||||||| Sbjct: 30468772 ccgccgccgccgcgccggcgcgg 30468750 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1600 ttgaacacaatcaggaggatgaacccacatctgttcat 1637 ||||| ||||| |||| ||||||||||||| ||||||| Sbjct: 36153908 ttgaagacaattaggaagatgaacccacatgtgttcat 36153945 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 428 ccgccgccgccgcgccggcgcg 449 |||||||||||||||||||||| Sbjct: 40742637 ccgccgccgccgcgccggcgcg 40742616 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 cctcctcgaggacgacgacga 413 ||||||||||||||||||||| Sbjct: 9442936 cctcctcgaggacgacgacga 9442916 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 24051891 tcctcctcgacgacgacgacgacga 24051915
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1827 ggagagggtcgagaggccggagacctacaagcaatggcaggtaaggaacc 1876 ||||||| | |||||||| ||||| |||||||||||||||||| |||||| Sbjct: 31148 ggagaggatggagaggccagagacatacaagcaatggcaggtacggaacc 31197 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1600 ttgaacacaatcaggaggatgaacccacatctgttcat 1637 ||||| ||||| |||| ||||||||||||| ||||||| Sbjct: 30921 ttgaagacaattaggaagatgaacccacatgtgttcat 30958
>dbj|AK119896.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-C06, full insert sequence Length = 3032 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1827 ggagagggtcgagaggccggagacctacaagcaatggcaggtaaggaacc 1876 ||||||| | |||||||| ||||| |||||||||||||||||| |||||| Sbjct: 2401 ggagaggatggagaggccagagacatacaagcaatggcaggtacggaacc 2450 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1600 ttgaacacaatcaggaggatgaacccacatctgttcat 1637 ||||| ||||| |||| ||||||||||||| ||||||| Sbjct: 2174 ttgaagacaattaggaagatgaacccacatgtgttcat 2211
>dbj|AK102593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098G15, full insert sequence Length = 2662 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1827 ggagagggtcgagaggccggagacctacaagcaatggcaggtaaggaacc 1876 ||||||| | |||||||| ||||| |||||||||||||||||| |||||| Sbjct: 2217 ggagaggatggagaggccagagacatacaagcaatggcaggtacggaacc 2266 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1600 ttgaacacaatcaggaggatgaacccacatctgttcat 1637 ||||| ||||| |||| ||||||||||||| ||||||| Sbjct: 1990 ttgaagacaattaggaagatgaacccacatgtgttcat 2027
>gb|BT013847.1| Lycopersicon esculentum clone 132804F, mRNA sequence Length = 2525 Score = 58.0 bits (29), Expect = 2e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1828 gagagggtcgagaggccggagacctacaagcaatggcaggt 1868 |||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 2129 gagagggttgagaggcctgagacgtacaagcaatggcaggt 2169
>dbj|AK226419.1| Arabidopsis thaliana mRNA for scarecrow-like protein, complete cds, clone: RAFL06-09-N12 Length = 2009 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1840 aggccggagacctacaagcaatggcaggtaagga 1873 ||||| ||||||||||||||||||||||| |||| Sbjct: 1662 aggccagagacctacaagcaatggcaggttagga 1695
>ref|NM_202662.1| Arabidopsis thaliana unknown protein (AT3G46600) mRNA, complete cds Length = 1963 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1840 aggccggagacctacaagcaatggcaggtaagga 1873 ||||| ||||||||||||||||||||||| |||| Sbjct: 1582 aggccagagacctacaagcaatggcaggttagga 1615
>ref|NM_114527.2| Arabidopsis thaliana transcription factor (AT3G46600) mRNA, complete cds Length = 2042 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1840 aggccggagacctacaagcaatggcaggtaagga 1873 ||||| ||||||||||||||||||||||| |||| Sbjct: 1661 aggccagagacctacaagcaatggcaggttagga 1694
>gb|AY087418.1| Arabidopsis thaliana clone 35201 mRNA, complete sequence Length = 1968 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1840 aggccggagacctacaagcaatggcaggtaagga 1873 ||||| ||||||||||||||||||||||| |||| Sbjct: 1630 aggccagagacctacaagcaatggcaggttagga 1663
>emb|BX823273.1|CNS0A7CU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1907 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1840 aggccggagacctacaagcaatggcaggtaagga 1873 ||||| ||||||||||||||||||||||| |||| Sbjct: 1580 aggccagagacctacaagcaatggcaggttagga 1613
>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12 Length = 100815 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1840 aggccggagacctacaagcaatggcaggtaagga 1873 ||||| ||||||||||||||||||||||| |||| Sbjct: 58686 aggccagagacctacaagcaatggcaggttagga 58719
>emb|AJ539024.1|NTA539024 Nicotiana tabacum cDNA-AFLP-fragment BT4-M32-026 Length = 213 Score = 50.1 bits (25), Expect = 0.038 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1828 gagagggtcgagaggccggagacctacaagcaatggcaggt 1868 |||||||| |||||||| ||||| || |||||||||||||| Sbjct: 136 gagagggttgagaggcctgagacatataagcaatggcaggt 176
>emb|AJ538755.1|NTA538755 Nicotiana tabacum cDNA-AFLP-fragment BC43-M1-045 Length = 247 Score = 50.1 bits (25), Expect = 0.038 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1828 gagagggtcgagaggccggagacctacaagcaatggcaggt 1868 |||||||| |||||||| ||||| || |||||||||||||| Sbjct: 170 gagagggttgagaggcctgagacatataagcaatggcaggt 210
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 423 tgctcccgccgccgccgcgccggc 446 |||||||||||||||||||||||| Sbjct: 64303 tgctcccgccgccgccgcgccggc 64280
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 423 tgctcccgccgccgccgcgccggc 446 |||||||||||||||||||||||| Sbjct: 161373 tgctcccgccgccgccgcgccggc 161350
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Plus Query: 423 tgctcccgccgccgccgcgccggc 446 |||||||||||||||||||||||| Sbjct: 117571 tgctcccgccgccgccgcgccggc 117594
>ref|XM_867101.1| PREDICTED: Bos taurus similar to gastrin-releasing peptide isoform 2 preproprotein (LOC615323), mRNA Length = 1546 Score = 46.1 bits (23), Expect = 0.59 Identities = 26/27 (96%) Strand = Plus / Minus Query: 419 cctctgctcccgccgccgccgcgccgg 445 |||||||||| |||||||||||||||| Sbjct: 723 cctctgctccggccgccgccgcgccgg 697
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 46.1 bits (23), Expect = 0.59 Identities = 23/23 (100%) Strand = Plus / Minus Query: 428 ccgccgccgccgcgccggcgcgg 450 ||||||||||||||||||||||| Sbjct: 97035 ccgccgccgccgcgccggcgcgg 97013
>gb|AC006346.1|AC006346 Homo sapiens PAC clone RP5-820G22 from 7, complete sequence Length = 130336 Score = 46.1 bits (23), Expect = 0.59 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1946 agagctatcacaaggatttcttc 1968 ||||||||||||||||||||||| Sbjct: 71240 agagctatcacaaggatttcttc 71262
>gb|AC000373.1|HSAC000373 Human cosmid g1862d218, complete sequence Length = 39602 Score = 46.1 bits (23), Expect = 0.59 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1946 agagctatcacaaggatttcttc 1968 ||||||||||||||||||||||| Sbjct: 18593 agagctatcacaaggatttcttc 18615
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 367 gccgtgctcgcctacatcaacc 388 |||||||||||||||||||||| Sbjct: 1974362 gccgtgctcgcctacatcaacc 1974341
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 685 gacgacgacctggagctggagg 706 |||||||||||||||||||||| Sbjct: 423525 gacgacgacctggagctggagg 423504
>ref|NM_001075080.1| Oryza sativa (japonica cultivar-group) Os11g0705200 (Os11g0705200) mRNA, complete cds Length = 2215 Score = 44.1 bits (22), Expect = 2.3 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1665 cgcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcga 1724 |||||| |||||| |||||||||| | |||| | ||||||| || ||| || || ||||| Sbjct: 1723 cgcgcccttcttcctgacgcgcttcagggagacgctcttcttctactcgtcgcagttcga 1782 Query: 1725 catgct 1730 |||||| Sbjct: 1783 catgct 1788
>ref|NM_001069708.1| Oryza sativa (japonica cultivar-group) Os09g0415400 (Os09g0415400) mRNA, complete cds Length = 1153 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 ttcctcctcgaggacgacgacgacga 416 ||||||||||| |||||||||||||| Sbjct: 374 ttcctcctcgacgacgacgacgacga 399 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 454 tcctcctcgacgacgacgacgacga 478 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 685 tcctcctcgacgacgacgacgacga 709
>ref|NM_001051811.1| Oryza sativa (japonica cultivar-group) Os01g0928400 (Os01g0928400) mRNA, partial cds Length = 1569 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 428 ccgccgccgccgcgccggcgcg 449 |||||||||||||||||||||| Sbjct: 545 ccgccgccgccgcgccggcgcg 566
>gb|AC183837.3| Pan troglodytes BAC clone CH251-60C22 from chromosome 17, complete sequence Length = 239719 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 194673 gaccaatcttcctcttcctccttctc 194698
>ref|XM_001134416.1| PREDICTED: Homo sapiens chromosome 1 open reading frame 133, transcript variant 1 (C1orf133), mRNA Length = 2702 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 419 cctctgctcccgccgccgccgc 440 |||||||||||||||||||||| Sbjct: 1504 cctctgctcccgccgccgccgc 1525
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 685 gacgacgacctggagctggagg 706 |||||||||||||||||||||| Sbjct: 408776 gacgacgacctggagctggagg 408755
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2358 aaatagaaatgatattctgatg 2379 |||||||||||||||||||||| Sbjct: 21562 aaatagaaatgatattctgatg 21541
>gb|AC183625.3| Pan troglodytes BAC clone CH251-12B21 from chromosome 17, complete sequence Length = 134326 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 90113 gaccaatcttcctcttcctccttctc 90138
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 cgccgtgctcgcctacatcaac 387 |||||||||||||||||||||| Sbjct: 557318 cgccgtgctcgcctacatcaac 557339
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 888 gaccggagtgcccaccgtggag 909 |||||||||||||||||||||| Sbjct: 59244 gaccggagtgcccaccgtggag 59265
>ref|XM_539166.2| PREDICTED: Canis familiaris similar to adenylate cyclase 8 (LOC482045), mRNA Length = 3842 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 419 cctctgctcccgccgccgccgc 440 |||||||||||||||||||||| Sbjct: 191 cctctgctcccgccgccgccgc 170
>gb|BC041488.2| Homo sapiens cDNA clone IMAGE:5494257, partial cds Length = 3459 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 247 gaccaatcttcctcttcctccttctc 272
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 cagcagcagcagctcctgttcc 226 |||||||||||||||||||||| Sbjct: 3167321 cagcagcagcagctcctgttcc 3167300
>dbj|AK057473.1| Homo sapiens cDNA FLJ32911 fis, clone TESTI2006210 Length = 1911 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 624 gaccaatcttcctcttcctccttctc 649
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 tcccgccgccgccgcgccggcg 447 |||||||||||||||||||||| Sbjct: 2828265 tcccgccgccgccgcgccggcg 2828286
>gb|BC094794.1| Homo sapiens cDNA clone IMAGE:30520069 Length = 2717 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 419 cctctgctcccgccgccgccgc 440 |||||||||||||||||||||| Sbjct: 1504 cctctgctcccgccgccgccgc 1525
>tpg|BK001591.1| TPA_exp: Homo sapiens chromosome 17 proximal SMS-REP low-copy repeat, genomic sequence Length = 255901 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 6467 gaccaatcttcctcttcctccttctc 6442
>tpg|BK001590.1| TPA_exp: Homo sapiens chromosome 17 middle SMS-REP low-copy repeat, genomic sequence Length = 240806 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 236327 gaccaatcttcctcttcctccttctc 236352
>tpg|BK001589.1| TPA_exp: Homo sapiens chromosome 17 distal SMS-REP low-copy repeat, genomic sequence Length = 176482 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 6203 gaccaatcttcctcttcctccttctc 6178
>gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence Length = 176040 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 87888 gaccaatcttcctcttcctccttctc 87863
>gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, complete sequence Length = 207418 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 68765 gaccaatcttcctcttcctccttctc 68740
>gb|AC026271.6| Homo sapiens chromosome 17, clone RP11-815I9, complete sequence Length = 171978 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 97904 gaccaatcttcctcttcctccttctc 97879
>gb|AC105100.5| Homo sapiens, clone RP11-448D22, complete sequence Length = 167889 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 47011 gaccaatcttcctcttcctccttctc 46986
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 ttcctcctcgaggacgacgacgacga 416 ||||||||||| |||||||||||||| Sbjct: 14795468 ttcctcctcgacgacgacgacgacga 14795493 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 14795548 tcctcctcgacgacgacgacgacga 14795572 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 14795779 tcctcctcgacgacgacgacgacga 14795803
>gb|AC098850.2| Homo sapiens chromosome 17, clone RP11-92B11, complete sequence Length = 178965 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 70362 gaccaatcttcctcttcctccttctc 70337
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 428 ccgccgccgccgcgccggcgcg 449 |||||||||||||||||||||| Sbjct: 45283 ccgccgccgccgcgccggcgcg 45262
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 acggataagcgagtacgccaag 1431 |||||||||||||||||||||| Sbjct: 1330183 acggataagcgagtacgccaag 1330204
>gb|AC126352.6| Homo sapiens chromosome 17, clone CTD-2509K7, complete sequence Length = 211403 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 172806 gaccaatcttcctcttcctccttctc 172831
>gb|AC008088.8|AC008088 Homo sapiens chromosome 17, clone RP11-121A13, complete sequence Length = 118392 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 61174 gaccaatcttcctcttcctccttctc 61199
>gb|AC022596.9|AC022596 Homo sapiens chromosome 17, clone RP11-219A15, complete sequence Length = 192337 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gaccaatcttcctcttcctctttctc 40 |||||||||||||||||||| ||||| Sbjct: 180891 gaccaatcttcctcttcctccttctc 180916
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 ttcctcctcgaggacgacgacgacga 416 ||||||||||| |||||||||||||| Sbjct: 3807 ttcctcctcgacgacgacgacgacga 3832 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 3887 tcctcctcgacgacgacgacgacga 3911 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 4118 tcctcctcgacgacgacgacgacga 4142
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 ttcctcctcgaggacgacgacgacga 416 ||||||||||| |||||||||||||| Sbjct: 80857 ttcctcctcgacgacgacgacgacga 80882 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 80937 tcctcctcgacgacgacgacgacga 80961 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 81168 tcctcctcgacgacgacgacgacga 81192
>dbj|AK119737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-D08, full insert sequence Length = 1152 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 ttcctcctcgaggacgacgacgacga 416 ||||||||||| |||||||||||||| Sbjct: 374 ttcctcctcgacgacgacgacgacga 399 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 454 tcctcctcgacgacgacgacgacga 478 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 685 tcctcctcgacgacgacgacgacga 709
>dbj|AK111454.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-C02, full insert sequence Length = 1569 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 428 ccgccgccgccgcgccggcgcg 449 |||||||||||||||||||||| Sbjct: 545 ccgccgccgccgcgccggcgcg 566
>dbj|AK102199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087D22, full insert sequence Length = 2216 Score = 44.1 bits (22), Expect = 2.3 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1665 cgcgccgttcttcgtgacgcgctttaaggaggctctcttctacttctcttcacacttcga 1724 |||||| |||||| |||||||||| | |||| | ||||||| || ||| || || ||||| Sbjct: 1724 cgcgcccttcttcctgacgcgcttcagggagacgctcttcttctactcgtcgcagttcga 1783 Query: 1725 catgct 1730 |||||| Sbjct: 1784 catgct 1789
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2358 aaatagaaatgatattctgatg 2379 |||||||||||||||||||||| Sbjct: 47381 aaatagaaatgatattctgatg 47360
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2358 aaatagaaatgatattctgatg 2379 |||||||||||||||||||||| Sbjct: 114929 aaatagaaatgatattctgatg 114908
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence Length = 234061 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2358 aaatagaaatgatattctgatg 2379 |||||||||||||||||||||| Sbjct: 48850 aaatagaaatgatattctgatg 48871
>gb|U13016.1|SCU13016 Saccharomyces cerevisiae transcription initiation factor TFIIF middle subunit (TFG2) gene, complete cds, and small nuclear ribonucleoprotein (PRP18) gene, partial cds Length = 2809 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 caaggaaggaaggaggtggatc 106 |||||||||||||||||||||| Sbjct: 2604 caaggaaggaaggaggtggatc 2583
>ref|XM_001015929.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00267940) mRNA, complete cds Length = 4743 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 aatcttcctcttcctctttct 39 ||||||||||||||||||||| Sbjct: 4225 aatcttcctcttcctctttct 4205
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gcagcagctcctgttcccccc 230 ||||||||||||||||||||| Sbjct: 4713010 gcagcagctcctgttcccccc 4712990
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 cgccgccgccgcgccggcgcg 449 ||||||||||||||||||||| Sbjct: 939108 cgccgccgccgcgccggcgcg 939128
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 424 gctcccgccgccgccgcgccggcgc 448 ||||| ||||||||||||||||||| Sbjct: 2368512 gctccggccgccgccgcgccggcgc 2368488 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 agcgtccgacgacgccgtgctcgcc 378 |||| |||||||||||||||||||| Sbjct: 3275936 agcggccgacgacgccgtgctcgcc 3275960
>emb|CT832004.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA039E14, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 148 cccgccgccgccgcgccggcg 128
>emb|CT832002.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126H21, full insert sequence Length = 1576 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 1248 cccgccgccgccgcgccggcg 1228
>ref|XM_001219340.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_00120) mRNA, complete cds Length = 456 Score = 42.1 bits (21), Expect = 9.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 458 cgctcctcgccgtcgccaagcccttcgtcgacatcatcgcc 498 |||||||||| ||||||||||| || ||||| |||||||| Sbjct: 53 cgctcctcgcgctcgccaagcccgtcctcgacctcatcgcc 93
>dbj|AK243525.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100075O07, full insert sequence Length = 491 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 cctcctcgaggacgacgacga 413 ||||||||||||||||||||| Sbjct: 136 cctcctcgaggacgacgacga 156
>ref|NM_001074192.1| Oryza sativa (japonica cultivar-group) Os11g0265500 (Os11g0265500) mRNA, complete cds Length = 1605 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 198 tcctcctcgacgacgacgacgacga 222
>ref|NM_001071299.1| Oryza sativa (japonica cultivar-group) Os10g0457600 (Os10g0457600) mRNA, complete cds Length = 1809 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tcccgccgccgccgcgccggc 446 ||||||||||||||||||||| Sbjct: 290 tcccgccgccgccgcgccggc 310
>ref|NM_001058170.1| Oryza sativa (japonica cultivar-group) Os03g0806500 (Os03g0806500) mRNA, complete cds Length = 1462 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 81 cccgccgccgccgcgccggcg 61
>ref|NM_001054773.1| Oryza sativa (japonica cultivar-group) Os02g0768300 (Os02g0768300) mRNA, complete cds Length = 1397 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 1053 cccgccgccgccgcgccggcg 1033
>ref|NM_001049247.1| Oryza sativa (japonica cultivar-group) Os01g0273000 (Os01g0273000) mRNA, complete cds Length = 231 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 cctcctcgaggacgacgacga 413 ||||||||||||||||||||| Sbjct: 51 cctcctcgaggacgacgacga 71
>gb|BT026780.1| Gasterosteus aculeatus clone CFW41-C01 mRNA sequence Length = 1875 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 ccgccgccgccgcgccggcgc 448 ||||||||||||||||||||| Sbjct: 240 ccgccgccgccgcgccggcgc 220
>tpg|BK001015.1| TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.4 PDR1 ABC transporter (pdr1) gene, complete cds Length = 8375 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 139 tcctcctcgacgacgacgacgacga 115
>gb|AC188100.1| Pongo pygmaeus abelii chromosome UNK clone CH276-42H12, complete sequence Length = 197637 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1985 agtggatgttgcagggttgga 2005 ||||||||||||||||||||| Sbjct: 166581 agtggatgttgcagggttgga 166561
>ref|XM_001096996.1| PREDICTED: Macaca mulatta similar to RNA binding motif protein 15B (LOC700716), mRNA Length = 7422 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ctgctcccgccgccgccgcgc 442 ||||||||||||||||||||| Sbjct: 777 ctgctcccgccgccgccgcgc 757
>gb|CP000380.1| Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence Length = 1196094 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 gctcccgccgccgccgcgccggcgc 448 ||||| ||||||||||||||||||| Sbjct: 523192 gctccggccgccgccgcgccggcgc 523216
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 cgccgccgccgcgccggcgcg 449 ||||||||||||||||||||| Sbjct: 1542013 cgccgccgccgcgccggcgcg 1541993
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 agcgtccgacgacgccgtgctcgcc 378 |||| |||||||||||||||||||| Sbjct: 2592696 agcggccgacgacgccgtgctcgcc 2592720
>gb|AC182696.2| Populus trichocarpa clone Pop1-69I10, complete sequence Length = 92421 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 aatcttcctcttcctctttct 39 ||||||||||||||||||||| Sbjct: 89623 aatcttcctcttcctctttct 89643
>emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chromosome 16, complete sequence Length = 241451 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 gcatgggttcttgcgaggacg 133 ||||||||||||||||||||| Sbjct: 176759 gcatgggttcttgcgaggacg 176739
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ccttccagcagcagcagctcc 220 ||||||||||||||||||||| Sbjct: 230477 ccttccagcagcagcagctcc 230497
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 tcccgccgccgccgcgccggcgcgg 450 |||||||||||||||||| |||||| Sbjct: 42765 tcccgccgccgccgcgcctgcgcgg 42741
>gb|AF263141.1| Polybioides tabidus microsatellite 188 sequence Length = 328 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tcgaggacgacgacgacgagt 418 ||||||||||||||||||||| Sbjct: 221 tcgaggacgacgacgacgagt 241
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 31746 tcctcctcgacgacgacgacgacga 31770
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 tcccgccgccgccgcgccggcgcgg 450 |||||||||||||||||| |||||| Sbjct: 136667 tcccgccgccgccgcgcctgcgcgg 136691
>gb|BT019045.1| Zea mays clone Contig566.F mRNA sequence Length = 722 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 ctgctcccgccgccgccgcgccggc 446 ||||| ||||||||||||||||||| Sbjct: 216 ctgctgccgccgccgccgcgccggc 240
>gb|DQ145272.1| Drosophila miranda neo-X tor gene, partial sequence Length = 1266 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 ccaccgtggaggaggagtccg 919 ||||||||||||||||||||| Sbjct: 709 ccaccgtggaggaggagtccg 729
>gb|AC124704.4| Mus musculus BAC clone RP23-480H24 from chromosome 6, complete sequence Length = 185099 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2224 atttcagatttgtaccaaatg 2244 ||||||||||||||||||||| Sbjct: 4837 atttcagatttgtaccaaatg 4857
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ccgccgcgccggcgcgggact 454 ||||||||||||||||||||| Sbjct: 3259024 ccgccgcgccggcgcgggact 3259004
>dbj|AK091230.1| Homo sapiens cDNA FLJ33911 fis, clone CTONG2008577 Length = 3007 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1920 gaaaaaagcaagatacaaggt 1940 ||||||||||||||||||||| Sbjct: 527 gaaaaaagcaagatacaaggt 507
>gb|AC163031.5| Mus musculus BAC clone RP24-146A18 from chromosome 6, complete sequence Length = 149473 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2224 atttcagatttgtaccaaatg 2244 ||||||||||||||||||||| Sbjct: 8430 atttcagatttgtaccaaatg 8410
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1647 cgtcaatggcaccttcaacgc 1667 ||||||||||||||||||||| Sbjct: 4712118 cgtcaatggcaccttcaacgc 4712138
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tcccgccgccgccgcgccggc 446 ||||||||||||||||||||| Sbjct: 140402 tcccgccgccgccgcgccggc 140422
>emb|CR762485.16| Zebrafish DNA sequence from clone DKEY-269K12 in linkage group 19, complete sequence Length = 171225 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2269 tgttccttgaatcagtagctc 2289 ||||||||||||||||||||| Sbjct: 142630 tgttccttgaatcagtagctc 142610
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 tcccgccgccgccgcgccggc 446 ||||||||||||||||||||| Sbjct: 96563 tcccgccgccgccgcgccggc 96543
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tcccgccgccgccgcgccggc 446 ||||||||||||||||||||| Sbjct: 16261513 tcccgccgccgccgcgccggc 16261533
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 ccgccgccgccgcgccggcgc 448 ||||||||||||||||||||| Sbjct: 23965920 ccgccgccgccgcgccggcgc 23965940 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 32378030 cccgccgccgccgcgccggcg 32378050
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 tcccgccgccgccgcgccggcgcgg 450 |||||||||||||||||| |||||| Sbjct: 29094046 tcccgccgccgccgcgcctgcgcgg 29094022 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 33479843 cccgccgccgccgcgccggcg 33479823
>dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic gene cluster (vinR1, vinA, vinB, vinC, vinP2, vinP3, vinP4, vinG, vinF, vinD, vinE, vinH, vinI, vinJ, vinK, vinL, vinM, vinN, vinO, vinP1), partial and complete cds Length = 64492 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 684 cgacgacgacctggagctgga 704 ||||||||||||||||||||| Sbjct: 29637 cgacgacgacctggagctgga 29617 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 684 cgacgacgacctggagctgga 704 ||||||||||||||||||||| Sbjct: 50369 cgacgacgacctggagctgga 50349
>emb|AL158139.26| Human DNA sequence from clone RP1-80B9 on chromosome 6 Contains the 5' end of the GMDS gene for GDP-mannose 4,6-dehydratase, a novel gene and a CpG island, complete sequence Length = 130403 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2357 taaatagaaatgatattctga 2377 ||||||||||||||||||||| Sbjct: 129244 taaatagaaatgatattctga 129224
>gb|AC026360.17| Homo sapiens 3 BAC RP11-392B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 77304 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 atcttcctcttcctctttctc 40 ||||||||||||||||||||| Sbjct: 14248 atcttcctcttcctctttctc 14268
>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201259 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1508 acaaggatgatcttctcattg 1528 ||||||||||||||||||||| Sbjct: 179600 acaaggatgatcttctcattg 179580
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 108778 cccgccgccgccgcgccggcg 108798
>emb|BX649545.14| Zebrafish DNA sequence from clone CH211-9N13 in linkage group 19, complete sequence Length = 169802 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2269 tgttccttgaatcagtagctc 2289 ||||||||||||||||||||| Sbjct: 98978 tgttccttgaatcagtagctc 98958
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 27713 tcctcctcgacgacgacgacgacga 27737
>emb|BX321859.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 4/10 Length = 316050 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ttctccttccagcagcagcag 216 ||||||||||||||||||||| Sbjct: 41088 ttctccttccagcagcagcag 41068
>ref|NM_001031221.1| Gallus gallus coiled-coil domain containing 6 (CCDC6), mRNA emb|AJ851457.1| Gallus gallus mRNA for hypothetical protein, clone 3i14 Length = 4004 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 gctcccgccgccgccgcgccg 444 ||||||||||||||||||||| Sbjct: 53 gctcccgccgccgccgcgccg 33
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 cctcctcgaggacgacgacga 413 ||||||||||||||||||||| Sbjct: 113263 cctcctcgaggacgacgacga 113243
>emb|AL731673.8| Mouse DNA sequence from clone RP23-452E21 on chromosome 11, complete sequence Length = 134108 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 atcttcctcttcctctttctc 40 ||||||||||||||||||||| Sbjct: 63352 atcttcctcttcctctttctc 63372
>emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in linkage group 11, complete sequence Length = 237930 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cttccagcagcagcagctcct 221 ||||||||||||||||||||| Sbjct: 99502 cttccagcagcagcagctcct 99522
>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete sequence Length = 144474 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1619 tgaacccacatctgttcatcc 1639 ||||||||||||||||||||| Sbjct: 110464 tgaacccacatctgttcatcc 110484
>gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds Length = 1277 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 ctgctcccgccgccgccgcgccggc 446 ||||| ||||||||||||||||||| Sbjct: 727 ctgctgccgccgccgccgcgccggc 751
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 accggcacggcgacgacgacc 694 ||||||||||||||||||||| Sbjct: 2922010 accggcacggcgacgacgacc 2922030
>gb|AC016144.13|AC016144 Homo sapiens 12 BAC RP11-367O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178453 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1985 agtggatgttgcagggttgga 2005 ||||||||||||||||||||| Sbjct: 167202 agtggatgttgcagggttgga 167222
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 cctcgaggacgacgacgacga 416 ||||||||||||||||||||| Sbjct: 1930495 cctcgaggacgacgacgacga 1930475
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 ccgccgccgccgcgccggcgc 448 ||||||||||||||||||||| Sbjct: 958 ccgccgccgccgcgccggcgc 978
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 ccgccgccgccgcgccggcgc 448 ||||||||||||||||||||| Sbjct: 99884 ccgccgccgccgcgccggcgc 99904
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 39543 cccgccgccgccgcgccggcg 39563
>dbj|AK120555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130O10, full insert sequence Length = 2489 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 tcctcgccgtcgccaagccct 481 ||||||||||||||||||||| Sbjct: 1615 tcctcgccgtcgccaagccct 1635
>dbj|AK100198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N20, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 83 cccgccgccgccgcgccggcg 63
>dbj|AK073339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030K15, full insert sequence Length = 1398 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 1054 cccgccgccgccgcgccggcg 1034
>dbj|AK073308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I21, full insert sequence Length = 1198 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cccgccgccgccgcgccggcg 447 ||||||||||||||||||||| Sbjct: 88 cccgccgccgccgcgccggcg 68
>dbj|AK072460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121H13, full insert sequence Length = 1808 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tcccgccgccgccgcgccggc 446 ||||||||||||||||||||| Sbjct: 291 tcccgccgccgccgcgccggc 311
>dbj|AK063462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H03, full insert sequence Length = 1606 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 198 tcctcctcgacgacgacgacgacga 222
>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069, complete sequence Length = 103659 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 acttctccttccagcagcagcagct 218 |||||| |||||||||||||||||| Sbjct: 100597 acttcttcttccagcagcagcagct 100573
>ref|XM_316679.2| Anopheles gambiae str. PEST ENSANGP00000011347 (ENSANGG00000008858), partial mRNA Length = 636 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 706 gacgagcggcggcgcaagcag 726 ||||||||||||||||||||| Sbjct: 574 gacgagcggcggcgcaagcag 594
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 2/3 Length = 348050 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1619 tgaacccacatctgttcatcc 1639 ||||||||||||||||||||| Sbjct: 120118 tgaacccacatctgttcatcc 120098
>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 Length = 340000 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1619 tgaacccacatctgttcatcc 1639 ||||||||||||||||||||| Sbjct: 78959 tgaacccacatctgttcatcc 78979
>gb|AY110918.1| Zea mays CL7399_1 mRNA sequence Length = 896 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 cctcctcgaggacgacgacga 413 ||||||||||||||||||||| Sbjct: 123 cctcctcgaggacgacgacga 143
>gb|AC156390.3| Mus musculus 10 BAC RP24-280O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158038 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1508 acaaggatgatcttctcattg 1528 ||||||||||||||||||||| Sbjct: 96551 acaaggatgatcttctcattg 96571
>emb|AL132985.4|CNS01DTT Human chromosome 14 DNA sequence BAC R-1103G16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196993 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1920 gaaaaaagcaagatacaaggt 1940 ||||||||||||||||||||| Sbjct: 119278 gaaaaaagcaagatacaaggt 119298
>ref|XM_838070.1| Leishmania major strain Friedlin proteophosphoglycan (LMJ_0986) partial mRNA Length = 52179 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ccttccagcagcagcagctcc 220 ||||||||||||||||||||| Sbjct: 36997 ccttccagcagcagcagctcc 37017
>emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-306B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188736 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1920 gaaaaaagcaagatacaaggt 1940 ||||||||||||||||||||| Sbjct: 145834 gaaaaaagcaagatacaaggt 145814
>emb|AJ535045.1|OSA535045 Oryza sativa (japonica cultivar-group) pdr10 gene for PDR-like ABC transporter, exons 1-21 Length = 8375 Score = 42.1 bits (21), Expect = 9.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tcctcctcgaggacgacgacgacga 416 |||||||||| |||||||||||||| Sbjct: 139 tcctcctcgacgacgacgacgacga 115
>emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L19, complete sequence Length = 180915 Score = 42.1 bits (21), Expect = 9.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2279 atcagtagctctgatatttac 2299 ||||||||||||||||||||| Sbjct: 95233 atcagtagctctgatatttac 95253 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 373,615,530 Number of extensions: 21972742 Number of successful extensions: 199133 Number of sequences better than 10.0: 148 Number of HSP's gapped: 199124 Number of HSP's successfully gapped: 195 Length of query: 2402 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2379 Effective length of database: 18,503,978,556 Effective search space: 44020964984724 Effective search space used: 44020964984724 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
