ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf91i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P36714:L100_ADE12 Late 100 kDa protein - Human adenovirus 12 (HA... 36 0.67
2Q4WKB9:CWC22_ASPFU Pre-mRNA-splicing factor cwc22 - Aspergillus ... 35 2.0
3Q80VP1:EPN1_MOUSE Epsin-1 - Mus musculus (Mouse) 32 9.7

>P36714:L100_ADE12 Late 100 kDa protein - Human adenovirus 12 (HAdV-12)|
          Length = 782
 Score = 36.2 bits (82), Expect = 0.67
 Identities = 26/93 (27%), Positives = 41/93 (44%)
 Frame = +2

Query: 1013 VHFQPTTVLIWIYCSLSRNPDYSA*WEQLITIFLLTCVWMINCLCLICSSPHFNYSLNIS 1192
            ++F+     +W +C L R  +Y A    L+T      +   +C C +C+ PH +   N  
Sbjct: 509  IYFRECPPPLWSHCYLLRLANYLAYHSDLMTDSSGEGLMECHCRCNLCT-PHRSLVCNTE 567

Query: 1193 DLERLLVVQKLELHGPSGCSYFASAWRFFLPGL 1291
             L    V+   E+ GP   S F +  R   PGL
Sbjct: 568  LLSESQVIGTFEMQGPQSDSNFTTNLR-LTPGL 599



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>Q4WKB9:CWC22_ASPFU Pre-mRNA-splicing factor cwc22 - Aspergillus fumigatus (Sartorya|
           fumigata)
          Length = 881

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = +2

Query: 38  APPASIAPTRLRGFFLPLVHHKSRFISNRA*FPLLAGSASCARSRR---QGVNPARLRAE 208
           +P  S+ P R R  +       SR +S     PL A  A  AR RR   Q ++P R RAE
Sbjct: 750 SPSRSVTPPRRRTSYSRRDRSYSRSLSRSVTPPLRAVDAR-ARGRRYSSQSLSPPRRRAE 808

Query: 209 RSIGGTPSIP--RPASDSIPR 265
           RS+      P  RP  DS+ R
Sbjct: 809 RSVSPQRPPPGRRPRGDSLSR 829



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>Q80VP1:EPN1_MOUSE Epsin-1 - Mus musculus (Mouse)|
          Length = 575

 Score = 32.3 bits (72), Expect = 9.7
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
 Frame = -1

Query: 353 TQAGGRATGPW----KEPI*PSCEKPTLIRPSGDAELNQRRDAESTEFPRS----IAPRG 198
           T  G +A+ P+      P  PS   P    P     LNQ R +     P +    I+P G
Sbjct: 493 TPPGSKASNPFLPSGAPPTGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLG 552

Query: 197 GGPDLPP 177
           GGP LPP
Sbjct: 553 GGPGLPP 559


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 449,572,891
Number of extensions: 10413296
Number of successful extensions: 27809
Number of sequences better than 10.0: 3
Number of HSP's gapped: 27725
Number of HSP's successfully gapped: 3
Length of query: 830
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 708
Effective length of database: 67,222,449
Effective search space: 47593493892
Effective search space used: 47593493892
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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