ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91i20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 48.1 bits (24), Expect = 0.15 Identities = 27/28 (96%) Strand = Plus / Plus Query: 327 ccccgtcgcccgcccgcccgcctgcgtc 354 |||||||||||||||||||||| ||||| Sbjct: 75330 ccccgtcgcccgcccgcccgcccgcgtc 75357
>gb|AC012147.7|AC012147 Mus musculus, clone RP23-191A4, complete sequence Length = 217034 Score = 46.1 bits (23), Expect = 0.61 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1576 tcttctaaaaccactatctacttaatt 1602 ||||| ||||||||||||||||||||| Sbjct: 126950 tcttcaaaaaccactatctacttaatt 126924
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1604 cttgactgagataatgttatga 1625 |||||||||||||||||||||| Sbjct: 8128 cttgactgagataatgttatga 8149
>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence Length = 212472 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1365 ctcagctcttgcagatagtgtcttgc 1390 |||||||||||| ||||||||||||| Sbjct: 60450 ctcagctcttgcggatagtgtcttgc 60475
>emb|AL355361.39| Human DNA sequence from clone RP11-58N22 on chromosome 10 Contains a CpG island, complete sequence Length = 153070 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1141 tctctgtttaatttgttcttct 1162 |||||||||||||||||||||| Sbjct: 125496 tctctgtttaatttgttcttct 125517
>emb|BX927407.11| Zebrafish DNA sequence from clone CH211-67F24 in linkage group 13, complete sequence Length = 123739 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2161 tgtctgtttgtgctcctttaga 2182 |||||||||||||||||||||| Sbjct: 3769 tgtctgtttgtgctcctttaga 3748
>gb|AC119724.8| Homo sapiens 3 BAC RP11-674D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148729 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2161 tgtctgtttgtgctcctttaga 2182 |||||||||||||||||||||| Sbjct: 40742 tgtctgtttgtgctcctttaga 40763
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 ggccgcgccgccggcgtcgatc 55 |||||||||||||||||||||| Sbjct: 468754 ggccgcgccgccggcgtcgatc 468775
>emb|AL683882.8| Mouse DNA sequence from clone RP23-205P2 on chromosome 2, complete sequence Length = 74687 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 tcgcccgcccgcccgcctgcgt 353 |||||||||||||||||||||| Sbjct: 58000 tcgcccgcccgcccgcctgcgt 57979
>ref|XM_001016463.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00129950) mRNA, complete cds Length = 591 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2140 agcagctgatcttgcttttgg 2160 ||||||||||||||||||||| Sbjct: 318 agcagctgatcttgcttttgg 338
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gcgccgccggcgtcgatcgcc 58 ||||||||||||||||||||| Sbjct: 3445429 gcgccgccggcgtcgatcgcc 3445409
>ref|NM_001073158.1| Oryza sativa (japonica cultivar-group) Os12g0405300 (Os12g0405300) mRNA, complete cds Length = 2223 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 672 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 712
>ref|NM_001067915.1| Oryza sativa (japonica cultivar-group) Os08g0254200 (Os08g0254200) mRNA, complete cds Length = 2501 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 649 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 689
>ref|XM_001148050.1| PREDICTED: Pan troglodytes solute carrier family 45, member 4, transcript variant 2 (SLC45A4), mRNA Length = 7364 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tggccccgtcgcccgcccgcccgcc 348 |||||||| |||||||||||||||| Sbjct: 2402 tggccccgccgcccgcccgcccgcc 2378
>ref|XM_519984.2| PREDICTED: Pan troglodytes solute carrier family 45, member 4, transcript variant 3 (SLC45A4), mRNA Length = 7161 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tggccccgtcgcccgcccgcccgcc 348 |||||||| |||||||||||||||| Sbjct: 2199 tggccccgccgcccgcccgcccgcc 2175
>gb|AC187733.3| Pan troglodytes BAC clone CH251-434D23 from chromosome 7, complete sequence Length = 168847 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1618 tgttatgatctcttactaggcaata 1642 |||||||||||||||||||| |||| Sbjct: 155221 tgttatgatctcttactaggtaata 155245
>ref|XM_933796.2| PREDICTED: Homo sapiens solute carrier family 45, member 4, transcript variant 2 (SLC45A4), mRNA Length = 7155 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tggccccgtcgcccgcccgcccgcc 348 |||||||| |||||||||||||||| Sbjct: 2196 tggccccgccgcccgcccgcccgcc 2172
>tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1640 atattttaaattcagattttg 1660 ||||||||||||||||||||| Sbjct: 2402636 atattttaaattcagattttg 2402616
>ref|XM_992551.1| PREDICTED: Mus musculus hypothetical protein LOC672311 (LOC672311), mRNA Length = 681 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cccgtcgcccgcccgcccgcc 348 ||||||||||||||||||||| Sbjct: 453 cccgtcgcccgcccgcccgcc 473
>ref|XM_980370.1| PREDICTED: Mus musculus hypothetical protein LOC665925 (LOC665925), mRNA Length = 681 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cccgtcgcccgcccgcccgcc 348 ||||||||||||||||||||| Sbjct: 453 cccgtcgcccgcccgcccgcc 473
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cgcgccgccggcgtcgatcgc 57 ||||||||||||||||||||| Sbjct: 5511088 cgcgccgccggcgtcgatcgc 5511108
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1635 aggcaatattttaaattcaga 1655 ||||||||||||||||||||| Sbjct: 265783 aggcaatattttaaattcaga 265803
>gb|BC090891.1| Homo sapiens solute carrier family 45, member 4, mRNA (cDNA clone IMAGE:30378268), partial cds Length = 2610 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tggccccgtcgcccgcccgcccgcc 348 |||||||| |||||||||||||||| Sbjct: 2286 tggccccgccgcccgcccgcccgcc 2262
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggccgcgccgccggcgtcgatcgcc 58 |||||||| |||||||||||||||| Sbjct: 1269042 ggccgcgcagccggcgtcgatcgcc 1269018
>gb|AC108821.6| Mus musculus chromosome 15, clone RP23-61D6, complete sequence Length = 216909 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 cccgtcgcccgcccgcccgcc 348 ||||||||||||||||||||| Sbjct: 43565 cccgtcgcccgcccgcccgcc 43545
>gb|AY592132.1| Uncultured bacterium clone Kazan-2B-07/BC19-2B-07 16S ribosomal RNA gene, partial sequence Length = 1148 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 903 ccagagactgggataacacgg 923 ||||||||||||||||||||| Sbjct: 2 ccagagactgggataacacgg 22
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1611 gagataatgttatgatctctt 1631 ||||||||||||||||||||| Sbjct: 44909 gagataatgttatgatctctt 44929
>gb|AC119219.6| Mus musculus chromosome 12, clone RP24-201C18, complete sequence Length = 187098 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 cctcgccggctctgcttcctgtgct 163 |||||||| |||||||||||||||| Sbjct: 177076 cctcgccgtctctgcttcctgtgct 177100
>gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, complete sequence Length = 215972 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 cctcgccggctctgcttcctgtgct 163 |||||||| |||||||||||||||| Sbjct: 94674 cctcgccgtctctgcttcctgtgct 94650
>gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, complete sequence Length = 133815 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2152 tgcttttggtgtctgtttgtg 2172 ||||||||||||||||||||| Sbjct: 49837 tgcttttggtgtctgtttgtg 49817
>gb|AC108837.8| Mus musculus chromosome 15, clone RP23-287P15, complete sequence Length = 226886 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 cccgtcgcccgcccgcccgcc 348 ||||||||||||||||||||| Sbjct: 197183 cccgtcgcccgcccgcccgcc 197163
>gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complete sequence Length = 136006 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1618 tgttatgatctcttactaggcaata 1642 |||||||||||||||||||| |||| Sbjct: 58624 tgttatgatctcttactaggtaata 58600
>gb|U97017.1| Caenorhabditis elegans cosmid F47B3, complete sequence Length = 30413 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1487 taactgaaacatttatagaaa 1507 ||||||||||||||||||||| Sbjct: 20710 taactgaaacatttatagaaa 20730
>gb|AC011676.10| Homo sapiens chromosome , clone RP11-10J21, complete sequence Length = 197630 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 tggccccgtcgcccgcccgcccgcc 348 |||||||| |||||||||||||||| Sbjct: 76312 tggccccgccgcccgcccgcccgcc 76336
>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence Length = 181025 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2152 tgcttttggtgtctgtttgtg 2172 ||||||||||||||||||||| Sbjct: 178848 tgcttttggtgtctgtttgtg 178828
>gb|AC160985.4| Mus musculus BAC clone RP23-333D9 from chromosome 12, complete sequence Length = 201990 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1640 atattttaaattcagattttg 1660 ||||||||||||||||||||| Sbjct: 5805 atattttaaattcagattttg 5825
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 12267399 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 12267359
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 9389378 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 9389418
>gb|AC090887.3| Mus musculus strain C57BL/6J clone RP23-404D8, complete sequence Length = 161153 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1640 atattttaaattcagattttg 1660 ||||||||||||||||||||| Sbjct: 126574 atattttaaattcagattttg 126594
>emb|AL445929.5| Human DNA sequence from clone RP11-408M7 on chromosome 13 Contains a CpG island, complete sequence Length = 169403 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2150 cttgcttttggtgtctgtttg 2170 ||||||||||||||||||||| Sbjct: 168267 cttgcttttggtgtctgtttg 168247
>emb|AL512374.1| Human DNA sequence from clone RP11-65G20 on chromosome Xq26.1-27.1, complete sequence Length = 54774 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2150 cttgcttttggtgtctgtttg 2170 ||||||||||||||||||||| Sbjct: 52779 cttgcttttggtgtctgtttg 52759
>emb|AL445259.10| Human DNA sequence from clone RP11-532N4 on chromosome 6 Contains part of the TRDN gene for triadin (TDN, TRIADIN) (one variant encodes protein sequence similar to hypothetical protein from macaque) and a novel gene, complete sequence Length = 134687 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2150 cttgcttttggtgtctgtttg 2170 ||||||||||||||||||||| Sbjct: 35262 cttgcttttggtgtctgtttg 35242
>emb|AL353614.9| Human DNA sequence from clone RP11-91N2 on chromosome 9p24.1-24.3 Contains part of a novel gene (FLJ35024) and a novel gene, complete sequence Length = 119255 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2150 cttgcttttggtgtctgtttg 2170 ||||||||||||||||||||| Sbjct: 111006 cttgcttttggtgtctgtttg 110986
>emb|AL139375.18| Human DNA sequence from clone RP11-138N13 on chromosome 13q21.33-22.3, complete sequence Length = 146708 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2146 tgatcttgcttttggtgtctgtttg 2170 ||||||| ||||||||||||||||| Sbjct: 144616 tgatctttcttttggtgtctgtttg 144640
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cccgtcgcccgcccgcccgcc 348 ||||||||||||||||||||| Sbjct: 58595 cccgtcgcccgcccgcccgcc 58615
>emb|BX883052.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 11/11 Length = 349381 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1384 gtcttgcaaaggacatataattgga 1408 |||||| |||||||||||||||||| Sbjct: 330615 gtcttgtaaaggacatataattgga 330591
>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene Length = 404123 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2152 tgcttttggtgtctgtttgtg 2172 ||||||||||||||||||||| Sbjct: 204088 tgcttttggtgtctgtttgtg 204108
>emb|AL645855.25| Mouse DNA sequence from clone RP23-122N23 on chromosome 11 Contains a novel gene, complete sequence Length = 203914 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1044 ggatttattgctcattgtccagaaa 1068 |||||||||||||| |||||||||| Sbjct: 118846 ggatttattgctcagtgtccagaaa 118822
>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12 Length = 97572 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 13969 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 14009
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1946 ttggatgttggttcatttatg 1966 ||||||||||||||||||||| Sbjct: 499977 ttggatgttggttcatttatg 499997
>gb|AC084686.1|CBRMM39H11 Caenorhabditis briggsae cosmid MM39H11, complete sequence Length = 45693 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2271 gtggctctccagaaattggaa 2291 ||||||||||||||||||||| Sbjct: 40623 gtggctctccagaaattggaa 40643
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1487 taactgaaacatttatagaaa 1507 ||||||||||||||||||||| Sbjct: 2236 taactgaaacatttatagaaa 2216
>dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1575_B01 Length = 86158 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 65607 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 65647
>dbj|AK070969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070P10, full insert sequence Length = 2223 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 672 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 712
>dbj|AK066186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054H22, full insert sequence Length = 2502 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 650 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 690
>emb|BX649340.3| Mouse DNA sequence from clone RP23-225D24 on chromosome 2, complete sequence Length = 99083 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 tctcatcctgttcctagatgc 551 ||||||||||||||||||||| Sbjct: 94396 tctcatcctgttcctagatgc 94416
>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 226035 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2357 ttttcaacctttctttattct 2377 ||||||||||||||||||||| Sbjct: 201781 ttttcaacctttctttattct 201801
>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159296 Score = 42.1 bits (21), Expect = 9.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2144 gctgatcttgcttttggtgtctgtttgtgctcctttagatg 2184 |||||||| |||| |||| | ||||||||||||| |||||| Sbjct: 29918 gctgatctggcttgtggtatgtgtttgtgctcctctagatg 29958
>gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, complete sequence Length = 132960 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2152 tgcttttggtgtctgtttgtg 2172 ||||||||||||||||||||| Sbjct: 49836 tgcttttggtgtctgtttgtg 49816
>emb|CR855375.8| Zebrafish DNA sequence from clone CH211-159E12 in linkage group 11, complete sequence Length = 178231 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1641 tattttaaattcagattttgc 1661 ||||||||||||||||||||| Sbjct: 129338 tattttaaattcagattttgc 129318
>gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, complete sequence Length = 120229 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2152 tgcttttggtgtctgtttgtg 2172 ||||||||||||||||||||| Sbjct: 118422 tgcttttggtgtctgtttgtg 118402
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1640 atattttaaattcagattttg 1660 ||||||||||||||||||||| Sbjct: 732690 atattttaaattcagattttg 732670 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1640 atattttaaattcagattttg 1660 ||||||||||||||||||||| Sbjct: 953683 atattttaaattcagattttg 953663
>emb|AL833791.6| Mouse DNA sequence from clone RP23-289L9 on chromosome 4, complete sequence Length = 13228 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1361 cattctcagctcttgcagata 1381 ||||||||||||||||||||| Sbjct: 13196 cattctcagctcttgcagata 13216
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1724 aatctcttatcctctgttttt 1744 ||||||||||||||||||||| Sbjct: 146434 aatctcttatcctctgttttt 146414
>emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chromosome 4, complete sequence Length = 216190 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1361 cattctcagctcttgcagata 1381 ||||||||||||||||||||| Sbjct: 1968 cattctcagctcttgcagata 1988
>emb|AL583892.13| Mouse DNA sequence from clone RP23-32G7 on chromosome 15, complete sequence Length = 216733 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 cctcgccggctctgcttcctgtgct 163 |||||||| |||||||||||||||| Sbjct: 96990 cctcgccgtctctgcttcctgtgct 97014
>gb|AF000264.1| Caenorhabditis elegans cosmid F43E2, complete sequence Length = 28577 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tgattccagattcgatgaaaa 381 ||||||||||||||||||||| Sbjct: 16356 tgattccagattcgatgaaaa 16336
>dbj|D10658.1|HS2ICP11 Herpes simplex virus type 2 genes for DNA binding protein ICP8 (complete cds), UR28 (partial cds) and HSV-2 specific ORF (complete cds) Length = 5011 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 cccgtcgcccgcccgcccgcc 348 ||||||||||||||||||||| Sbjct: 4161 cccgtcgcccgcccgcccgcc 4141
>dbj|AB032952.1| Homo sapiens mRNA for KIAA1126 protein, partial cds Length = 6873 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tggccccgtcgcccgcccgcccgcc 348 |||||||| |||||||||||||||| Sbjct: 1921 tggccccgccgcccgcccgcccgcc 1897 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 464,156,066 Number of extensions: 26004633 Number of successful extensions: 138434 Number of sequences better than 10.0: 69 Number of HSP's gapped: 138433 Number of HSP's successfully gapped: 70 Length of query: 2492 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2469 Effective length of database: 18,503,978,556 Effective search space: 45686323054764 Effective search space used: 45686323054764 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
