ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf94h15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK062836:Os10g0478900 48 4e-06
2AK069743:Os05g0196700 30 1.5
3AK120595:Os06g0489500 29 2.0
4AK063623:Os03g0453800 29 2.6
5AK101983:Os01g0167800 28 5.8
6AY065970:Os01g0648000 27 7.5
7AK120308:Os01g0648000 27 7.5
8AK063506:Os03g0622100 27 7.5

>AK062836:Os10g0478900 |
          Length = 94
 Score = 48.1 bits (113), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
 Frame = +1

Query: 94  VLDSVPLFVVILGAAHVLALVFWIYKLAS--QKQPTRSKTH 210
           +LD +P  +V+L AAHVLAL +WIY+LA+   +QP RSK H
Sbjct: 54  LLDLLPFLIVLLIAAHVLALGYWIYRLATDGSRQPARSKKH 94



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>AK069743:Os05g0196700 |
          Length = 335

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
 Frame = -2

Query: 92  WAPAAGCF--CGIFCCDGE 42
           W P  GC   CG+FCC GE
Sbjct: 313 WWPRCGCGGGCGVFCCGGE 331



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>AK120595:Os06g0489500 |
          Length = 1590

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 355  KFFTKMRNMFGRIFC 399
            KFF+KM +MFG IFC
Sbjct: 1575 KFFSKMHHMFGTIFC 1589



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>AK063623:Os03g0453800 |
          Length = 107

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 94  VLDSVPLFVVILGAAHVLALVFWIYKLASQKQPTRSKTH*PRP 222
           +LD +PL +V+L + HVL LV       S + P+ S    P P
Sbjct: 16  LLDLLPLLIVLLISTHVLVLVHTSPSRESSRPPSGSSVLVPCP 58



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>AK101983:Os01g0167800 |
          Length = 792

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -1

Query: 399 TENPAKHVPHLGEELIGRWWCPPARRAASSLRIHWGGNEGDYLPYNEEEKTAR 241
           T NP +    L E  +G+   PP  R    LR+ W   E +  P + +E+T +
Sbjct: 304 TVNPTEPQNELVERYLGK--APPPDRPRPGLRVSWVRAEFNNCPEDADEETIK 354



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>AY065970:Os01g0648000 |
          Length = 860

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 296 Q*ILRDDAALLAGGHHHRPISSSPRCGTCLAGFSVL 403
           Q + R   A  A GHHH P S++ R     A  S++
Sbjct: 670 QLLFRSRKAATASGHHHVPSSTTTRVAPAAAAASLI 705



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>AK120308:Os01g0648000 |
          Length = 935

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 296 Q*ILRDDAALLAGGHHHRPISSSPRCGTCLAGFSVL 403
           Q + R   A  A GHHH P S++ R     A  S++
Sbjct: 745 QLLFRSRKAATASGHHHVPSSTTTRVAPAAAAASLI 780



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>AK063506:Os03g0622100 |
          Length = 382

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -1

Query: 324 RAASSLRIHWGGNEGDYLPYNEEEKTARNREMRPRARSVRLAPRRLLLGSQLVDPEHEG* 145
           R   S     GG +GD   +++ +      +   R RS+  A +R L   ++     E  
Sbjct: 140 REEKSAGAEGGGRDGDKNGHHQHQLEMTPHKNSSRCRSIPSACKRGLFSDEIEQDHREEK 199

Query: 144 NVSGAEDDDEE 112
                ED+DE+
Sbjct: 200 KEGDDEDEDED 210


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,667,077
Number of extensions: 346556
Number of successful extensions: 985
Number of sequences better than 10.0: 8
Number of HSP's gapped: 985
Number of HSP's successfully gapped: 8
Length of query: 194
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 99
Effective length of database: 11,595,960
Effective search space: 1148000040
Effective search space used: 1148000040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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