Clone Name | FLbaf94h15 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK062836:Os10g0478900 | 48 | 4e-06 | 2 | AK069743:Os05g0196700 | 30 | 1.5 | 3 | AK120595:Os06g0489500 | 29 | 2.0 | 4 | AK063623:Os03g0453800 | 29 | 2.6 | 5 | AK101983:Os01g0167800 | 28 | 5.8 | 6 | AY065970:Os01g0648000 | 27 | 7.5 | 7 | AK120308:Os01g0648000 | 27 | 7.5 | 8 | AK063506:Os03g0622100 | 27 | 7.5 |
---|
>AK062836:Os10g0478900 | Length = 94 Score = 48.1 bits (113), Expect = 4e-06 Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 2/41 (4%) Frame = +1 Query: 94 VLDSVPLFVVILGAAHVLALVFWIYKLAS--QKQPTRSKTH 210 +LD +P +V+L AAHVLAL +WIY+LA+ +QP RSK H Sbjct: 54 LLDLLPFLIVLLIAAHVLALGYWIYRLATDGSRQPARSKKH 94
>AK069743:Os05g0196700 | Length = 335 Score = 29.6 bits (65), Expect = 1.5 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 2/19 (10%) Frame = -2 Query: 92 WAPAAGCF--CGIFCCDGE 42 W P GC CG+FCC GE Sbjct: 313 WWPRCGCGGGCGVFCCGGE 331
>AK120595:Os06g0489500 | Length = 1590 Score = 29.3 bits (64), Expect = 2.0 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +1 Query: 355 KFFTKMRNMFGRIFC 399 KFF+KM +MFG IFC Sbjct: 1575 KFFSKMHHMFGTIFC 1589
>AK063623:Os03g0453800 | Length = 107 Score = 28.9 bits (63), Expect = 2.6 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 94 VLDSVPLFVVILGAAHVLALVFWIYKLASQKQPTRSKTH*PRP 222 +LD +PL +V+L + HVL LV S + P+ S P P Sbjct: 16 LLDLLPLLIVLLISTHVLVLVHTSPSRESSRPPSGSSVLVPCP 58
>AK101983:Os01g0167800 | Length = 792 Score = 27.7 bits (60), Expect = 5.8 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -1 Query: 399 TENPAKHVPHLGEELIGRWWCPPARRAASSLRIHWGGNEGDYLPYNEEEKTAR 241 T NP + L E +G+ PP R LR+ W E + P + +E+T + Sbjct: 304 TVNPTEPQNELVERYLGK--APPPDRPRPGLRVSWVRAEFNNCPEDADEETIK 354
>AY065970:Os01g0648000 | Length = 860 Score = 27.3 bits (59), Expect = 7.5 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 296 Q*ILRDDAALLAGGHHHRPISSSPRCGTCLAGFSVL 403 Q + R A A GHHH P S++ R A S++ Sbjct: 670 QLLFRSRKAATASGHHHVPSSTTTRVAPAAAAASLI 705
>AK120308:Os01g0648000 | Length = 935 Score = 27.3 bits (59), Expect = 7.5 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 296 Q*ILRDDAALLAGGHHHRPISSSPRCGTCLAGFSVL 403 Q + R A A GHHH P S++ R A S++ Sbjct: 745 QLLFRSRKAATASGHHHVPSSTTTRVAPAAAAASLI 780
>AK063506:Os03g0622100 | Length = 382 Score = 27.3 bits (59), Expect = 7.5 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 324 RAASSLRIHWGGNEGDYLPYNEEEKTARNREMRPRARSVRLAPRRLLLGSQLVDPEHEG* 145 R S GG +GD +++ + + R RS+ A +R L ++ E Sbjct: 140 REEKSAGAEGGGRDGDKNGHHQHQLEMTPHKNSSRCRSIPSACKRGLFSDEIEQDHREEK 199 Query: 144 NVSGAEDDDEE 112 ED+DE+ Sbjct: 200 KEGDDEDEDED 210 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,667,077 Number of extensions: 346556 Number of successful extensions: 985 Number of sequences better than 10.0: 8 Number of HSP's gapped: 985 Number of HSP's successfully gapped: 8 Length of query: 194 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 99 Effective length of database: 11,595,960 Effective search space: 1148000040 Effective search space used: 1148000040 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)