ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94h15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ245994.1| Zea mays clone 94067 mRNA sequence Length = 511 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 112 ctcttcgtcgtcatcctcggcgccgctcacgttctagccctcgtgttctggatctacaag 171 |||||||||||||||||| ||| || ||||| || ||||||||||||||||| |||||| Sbjct: 106 ctcttcgtcgtcatcctcctcgcggcccacgtcctggccctcgtgttctggatgtacaag 165 Query: 172 ctggcttcccagaagca 188 ||||||||| ||||||| Sbjct: 166 ctggcttccgagaagca 182
>emb|CT829059.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA212H09, full insert sequence Length = 402 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 73 cagccggcggccggcgcccacgtcctcgactccgtaccactcttcgtcgtcatcctcggc 132 |||||| |||||||| | | | |||||||| |||| || |||||||||||| ||||| | Sbjct: 63 cagccgccggccggctcgcgcctcctcgacgccgtcccgctcttcgtcgtcgtcctcctc 122 Query: 133 gccgctcacgttctagccctcgtgttctggatctacaagctggcttcccagaagcagccg 192 ||||| ||||| ||||||||||||| |||||| |||| | | || || | ||||||||| Sbjct: 123 gccgcccacgtcctagccctcgtgtactggatgtacaggttagcctcggacaagcagccg 182 Query: 193 acgcggagcaagacgca 209 ||||||| |||||||| Sbjct: 183 ccgcggaggaagacgca 199
>dbj|AK063739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F06, full insert sequence Length = 536 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 73 cagccggcggccggcgcccacgtcctcgactccgtaccactcttcgtcgtcatcctcggc 132 |||||| |||||||| | | | |||||||| |||| || |||||||||||| ||||| | Sbjct: 63 cagccgccggccggctcgcgcctcctcgacgccgtcccgctcttcgtcgtcgtcctcctc 122 Query: 133 gccgctcacgttctagccctcgtgttctggatctacaagctggcttcccagaagcagccg 192 ||||| ||||| ||||||||||||| |||||| |||| | | || || | ||||||||| Sbjct: 123 gccgcccacgtcctagccctcgtgtactggatgtacaggttagcctcggacaagcagccg 182 Query: 193 acgcggagcaagacgca 209 ||||||| |||||||| Sbjct: 183 ccgcggaggaagacgca 199
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 73 cagccggcggccggcgcccacgtcctcgactccgtaccactcttcgtcgtcatcctcggc 132 |||||| |||||||| | | | |||||||| |||| || |||||||||||| ||||| | Sbjct: 15610284 cagccgccggccggctcgcgcctcctcgacgccgtcccgctcttcgtcgtcgtcctcctc 15610343 Query: 133 gccgctcacgttctagccctcgt 155 ||||| ||||| ||||||||||| Sbjct: 15610344 gccgcccacgtcctagccctcgt 15610366
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 73 cagccggcggccggcgcccacgtcctcgactccgtaccactcttcgtcgtcatcctcggc 132 |||||| |||||||| | | | |||||||| |||| || |||||||||||| ||||| | Sbjct: 137844 cagccgccggccggctcgcgcctcctcgacgccgtcccgctcttcgtcgtcgtcctcctc 137903 Query: 133 gccgctcacgttctagccctcgt 155 ||||| ||||| ||||||||||| Sbjct: 137904 gccgcccacgtcctagccctcgt 137926
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 73 cagccggcggccggcgcccacgtcctcgactccgtaccactcttcgtcgtcatcctcggc 132 |||||| |||||||| | | | |||||||| |||| || |||||||||||| ||||| | Sbjct: 18971 cagccgccggccggctcgcgcctcctcgacgccgtcccgctcttcgtcgtcgtcctcctc 19030 Query: 133 gccgctcacgttctagccctcgt 155 ||||| ||||| ||||||||||| Sbjct: 19031 gccgcccacgtcctagccctcgt 19053
>gb|AC185994.3| Pan troglodytes BAC clone CH251-306M14 from chromosome 13, complete sequence Length = 154885 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 531 aaataattgcttcaaaaaatataa 554 |||||||||||||||||||||||| Sbjct: 136955 aaataattgcttcaaaaaatataa 136978
>ref|XM_816879.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506529.669) partial mRNA Length = 489 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 240 ttcgtgctgttttttcttcttcgt 263 |||||||||||||||||||||||| Sbjct: 477 ttcgtgctgttttttcttcttcgt 454
>emb|AL359513.12| Human DNA sequence from clone RP11-245D16 on chromosome 13 Contains the gene for TMTSP for transmembrane molecule with thrombospondin module (LOC55901), the gene fpr CGI-145 protein (LOC51028), the CKAP2 gene for cytoskeleton associated protein 2 (LB1, FLJ10749) and 3 CpG islands, complete sequence Length = 116430 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 531 aaataattgcttcaaaaaatataa 554 |||||||||||||||||||||||| Sbjct: 51879 aaataattgcttcaaaaaatataa 51856
>emb|BX537689.1|HSM805761 Homo sapiens genomic DNA; cDNA DKFZp686N18111 (from clone DKFZp686N18111) Length = 6402 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 531 aaataattgcttcaaaaaatataa 554 |||||||||||||||||||||||| Sbjct: 2313 aaataattgcttcaaaaaatataa 2336
>ref|XM_815799.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510889.340) partial mRNA Length = 489 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 240 ttcgtgctgttttttcttcttcg 262 ||||||||||||||||||||||| Sbjct: 477 ttcgtgctgttttttcttcttcg 455
>gb|AC161421.3| Mus musculus BAC clone RP24-424A8 from chromosome 9, complete sequence Length = 167449 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 378 catgtttggcaggattttctgttctgt 404 |||||| |||||||||||||||||||| Sbjct: 112339 catgttaggcaggattttctgttctgt 112365
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 gcagccggcggccggcgcccacg 94 ||||||||||||||||||||||| Sbjct: 2453199 gcagccggcggccggcgcccacg 2453177
>gb|AC154406.2| Mus musculus BAC clone RP24-251M20 from 9, complete sequence Length = 169877 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 378 catgtttggcaggattttctgttctgt 404 |||||| |||||||||||||||||||| Sbjct: 24922 catgttaggcaggattttctgttctgt 24948
>gb|AF178757.1| Anabaena PCC7120 phycobilisome rod structure gene cluster, partial sequence Length = 16341 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 ttttttcttcttcgttataggg 270 |||||||||||||||||||||| Sbjct: 14649 ttttttcttcttcgttataggg 14628
>ref|XM_653892.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1380.2), mRNA Length = 1977 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 385 ggcaggattttctgttctgtag 406 |||||||||||||||||||||| Sbjct: 26 ggcaggattttctgttctgtag 5
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 ttttttcttcttcgttataggg 270 |||||||||||||||||||||| Sbjct: 3642357 ttttttcttcttcgttataggg 3642336
>gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complete sequence Length = 144165 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 455 tgtcaaaataatggacaaaaca 476 |||||||||||||||||||||| Sbjct: 129353 tgtcaaaataatggacaaaaca 129332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ctcttcgtcgtcatcctcggcg 133 |||||||||||||||||||||| Sbjct: 29332625 ctcttcgtcgtcatcctcggcg 29332604
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ctcttcgtcgtcatcctcggcg 133 |||||||||||||||||||||| Sbjct: 121314 ctcttcgtcgtcatcctcggcg 121293
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 ttttttcttcttcgttataggg 270 |||||||||||||||||||||| Sbjct: 626926 ttttttcttcttcgttataggg 626905
>gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome 16, complete sequence Length = 166329 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 taattgcttcaaaaaatataat 555 |||||||||||||||||||||| Sbjct: 48276 taattgcttcaaaaaatataat 48297
>gb|M80435.1|ANARODCORA Anabaena sp. cpcF gene, 3' end; cpcG1, cpcG2, cpcG3, and cpcG4 genes, complete cds; and unknown ORF, 3' end Length = 3971 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 ttttttcttcttcgttataggg 270 |||||||||||||||||||||| Sbjct: 2279 ttttttcttcttcgttataggg 2258
>gb|CP000460.1| Burkholderia cenocepacia HI2424 chromosome 3, complete genome Length = 1055417 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agcagccggcggccggcgcccacgt 95 ||||||||||||||||||| ||||| Sbjct: 1046768 agcagccggcggccggcgcgcacgt 1046792
>emb|CT571275.15| Mouse DNA sequence from clone RP24-284I9 on chromosome 16, complete sequence Length = 182213 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 taattgcttcaaaaaatataa 554 ||||||||||||||||||||| Sbjct: 49385 taattgcttcaaaaaatataa 49405
>gb|CP000380.1| Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence Length = 1196094 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agcagccggcggccggcgcccacgt 95 ||||||||||||||||||| ||||| Sbjct: 13530 agcagccggcggccggcgcgcacgt 13554
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agcagccggcggccggcgcccacgt 95 ||||||||||||||||||| ||||| Sbjct: 785987 agcagccggcggccggcgcgcacgt 786011
>emb|AL049649.7|HSJ734C18 Human DNA sequence from clone RP4-734C18 on chromosome 20 Contains a putative novel gene, ESTs, STSs, GSSs and genomic marker D20S6, complete sequence Length = 135636 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 gaaataattgcttcaaaaaat 550 ||||||||||||||||||||| Sbjct: 83848 gaaataattgcttcaaaaaat 83868
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 cttctggctggagggcaccac 343 ||||||||||||||||||||| Sbjct: 44209 cttctggctggagggcaccac 44229
>gb|AC079256.5| Homo sapiens BAC clone RP11-325I24 from 2, complete sequence Length = 156069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 ctagaaataattgcttcaaaa 547 ||||||||||||||||||||| Sbjct: 132821 ctagaaataattgcttcaaaa 132841
>gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, complete sequence Length = 206677 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 ctataaaaatcctagaaataa 536 ||||||||||||||||||||| Sbjct: 65968 ctataaaaatcctagaaataa 65948
>emb|CT485791.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 77367 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gatgatgcagctcttctggc 330 |||||||||||||||||||| Sbjct: 31171 gatgatgcagctcttctggc 31152
>ref|XM_001223410.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_04197) mRNA, complete cds Length = 2328 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cactcttcgtcgtcatcctc 129 |||||||||||||||||||| Sbjct: 902 cactcttcgtcgtcatcctc 883
>ref|XM_001144557.1| PREDICTED: Pan troglodytes intersectin 2, transcript variant 1 (ITSN2), mRNA Length = 6405 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 agaaacccagccccagaaac 36 |||||||||||||||||||| Sbjct: 6400 agaaacccagccccagaaac 6381
>ref|XM_001145237.1| PREDICTED: Pan troglodytes intersectin 2, transcript variant 3 (ITSN2), mRNA Length = 6336 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 agaaacccagccccagaaac 36 |||||||||||||||||||| Sbjct: 6331 agaaacccagccccagaaac 6312
>ref|XM_515329.2| PREDICTED: Pan troglodytes intersectin 2, transcript variant 4 (ITSN2), mRNA Length = 6504 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 agaaacccagccccagaaac 36 |||||||||||||||||||| Sbjct: 6499 agaaacccagccccagaaac 6480
>gb|DQ867020.1| Caenorhabditis elegans eukaryotic translation initiation factor eIF5B (iffb-1) mRNA, complete cds Length = 3698 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 actcttcgtcgtcatcctcg 130 |||||||||||||||||||| Sbjct: 1322 actcttcgtcgtcatcctcg 1303
>gb|AC146873.3| Xenopus tropicalis clone CH216-71K21, complete sequence Length = 147918 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 aataattgcttcaaaaaatataat 555 ||||||||||||| |||||||||| Sbjct: 78426 aataattgcttcataaaatataat 78449
>gb|AC166146.18| Medicago truncatula clone mth2-174g5, complete sequence Length = 110915 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 aataattgcttcaaaaaata 551 |||||||||||||||||||| Sbjct: 53181 aataattgcttcaaaaaata 53162
>gb|AC188107.1| Pongo pygmaeus abelii chromosome UNK clone CH276-5H12, complete sequence Length = 201045 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 tctataaaaatcctagaaataatt 538 ||||| |||||||||||||||||| Sbjct: 170660 tctatgaaaatcctagaaataatt 170683
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 cttcgtcgtcatcctcggcgccgc 137 ||||||||||||||||| |||||| Sbjct: 7091648 cttcgtcgtcatcctcgccgccgc 7091671
>gb|AC155957.2| Xenopus tropicalis clone CH216-18G23, complete sequence Length = 89687 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gcactatccctgatttccca 447 |||||||||||||||||||| Sbjct: 24086 gcactatccctgatttccca 24067
>gb|AC146002.2| Pan troglodytes BAC clone RP43-153B17 from 7, complete sequence Length = 169542 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tcaaaataatggacaaaaca 476 |||||||||||||||||||| Sbjct: 139247 tcaaaataatggacaaaaca 139266
>gb|AC155993.2| Xenopus tropicalis clone ISB1-298C4, complete sequence Length = 89687 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gcactatccctgatttccca 447 |||||||||||||||||||| Sbjct: 24086 gcactatccctgatttccca 24067
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 915478 tataaaaatcctagaaataa 915497
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 924806 tataaaaatcctagaaataa 924825
>gb|AC161474.4| Pan troglodytes BAC clone CH251-488B17 from chromosome 7, complete sequence Length = 191529 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tcaaaataatggacaaaaca 476 |||||||||||||||||||| Sbjct: 160548 tcaaaataatggacaaaaca 160567
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 821195 tataaaaatcctagaaataa 821214
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 901332 tataaaaatcctagaaataa 901351
>ref|NM_065135.2| Caenorhabditis elegans Initiation Factor Five B (eIF5B) family member (iffb-1) (iffb-1) mRNA, complete cds Length = 3561 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 actcttcgtcgtcatcctcg 130 |||||||||||||||||||| Sbjct: 1300 actcttcgtcgtcatcctcg 1281
>gb|AC105400.3| Homo sapiens BAC clone RP11-748L11 from 4, complete sequence Length = 90462 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 32268 tataaaaatcctagaaataa 32249
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cttcaaaaaatataatatct 559 |||||||||||||||||||| Sbjct: 9578540 cttcaaaaaatataatatct 9578521
>emb|AL357373.8| Human DNA sequence from clone RP11-414C16 on chromosome 1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila) and a novel pseudogene, complete sequence Length = 87340 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 ataaaaatcctagaaataat 537 |||||||||||||||||||| Sbjct: 9106 ataaaaatcctagaaataat 9087
>emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chromosome 6 Contains a putative novel gene, complete sequence Length = 72139 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 acaaaacagtgacagtaatttatt 492 ||||| |||||||||||||||||| Sbjct: 15165 acaaaccagtgacagtaatttatt 15142
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ataatggacaaaacagtgac 481 |||||||||||||||||||| Sbjct: 838154 ataatggacaaaacagtgac 838135
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 869286 tataaaaatcctagaaataa 869305
>emb|AJ005422.1|TCAJ5422 Tribolium castaneum mRNA for caudal protein, splice variant B Length = 1202 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gccggcgcccacgtcctcga 101 |||||||||||||||||||| Sbjct: 800 gccggcgcccacgtcctcga 819
>emb|AL050059.1|HSM800385 Homo sapiens genomic DNA; cDNA DKFZp566H153 (from clone DKFZp566H153) Length = 1556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 ataaaaatcctagaaataat 537 |||||||||||||||||||| Sbjct: 902 ataaaaatcctagaaataat 921
>ref|XM_395000.2| PREDICTED: Apis mellifera similar to maternal embryonic leucine zipper kinase (LOC411529), mRNA Length = 1821 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tcaaaataatggacaaaaca 476 |||||||||||||||||||| Sbjct: 116 tcaaaataatggacaaaaca 135
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 885317 tataaaaatcctagaaataa 885336
>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence Length = 166660 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 agaaacccagccccagaaac 36 |||||||||||||||||||| Sbjct: 154685 agaaacccagccccagaaac 154704
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 883674 tataaaaatcctagaaataa 883693
>gb|AC007534.2|AC007534 Genomic sequence for Arabidopsis thaliana BAC F7F22 from chromosome I, complete sequence Length = 118986 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 aaaaatcctagaaataattg 539 |||||||||||||||||||| Sbjct: 21677 aaaaatcctagaaataattg 21658
>gb|AC011751.2|AC011751 Homo sapiens BAC clone RP11-478I15 from Y, complete sequence Length = 179715 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 aaaataatggacaaaacagt 478 |||||||||||||||||||| Sbjct: 47629 aaaataatggacaaaacagt 47610
>gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13 Length = 100592 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcgtgctgttttttcttctt 260 |||||||||||||||||||| Sbjct: 86827 tcgtgctgttttttcttctt 86808
>gb|AC096548.1| Homo sapiens BAC clone CTD-2225G20 from 2, complete sequence Length = 51341 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 ctataaaaatcctagaaataattg 539 |||||||||||||||||| ||||| Sbjct: 42256 ctataaaaatcctagaaaaaattg 42233
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 2656452 tataaaaatcctagaaataa 2656471
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gacgcactgaccgcgcccgc 223 |||||||||||||||||||| Sbjct: 2149008 gacgcactgaccgcgcccgc 2148989
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 917135 tataaaaatcctagaaataa 917154
>emb|BX936450.6| Zebrafish DNA sequence from clone CH211-232I12 in linkage group 17, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cattttgtatgtcaaaataa 465 |||||||||||||||||||| Sbjct: 127654 cattttgtatgtcaaaataa 127635
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165137 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cttcaaaaaatataatatct 559 |||||||||||||||||||| Sbjct: 41851 cttcaaaaaatataatatct 41832
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tataaaaatcctagaaataa 536 |||||||||||||||||||| Sbjct: 846104 tataaaaatcctagaaataa 846123
>emb|AL732417.19| Mouse DNA sequence from clone RP23-36F21 on chromosome X, complete sequence Length = 176133 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 tatccctgatttcccatttt 451 |||||||||||||||||||| Sbjct: 172750 tatccctgatttcccatttt 172769
>gb|AC026301.3| Caenorhabditis elegans cosmid Y54F10BM, complete sequence Length = 85397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 actcttcgtcgtcatcctcg 130 |||||||||||||||||||| Sbjct: 55555 actcttcgtcgtcatcctcg 55536 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 114,597,542 Number of extensions: 6846882 Number of successful extensions: 152523 Number of sequences better than 10.0: 74 Number of HSP's gapped: 152523 Number of HSP's successfully gapped: 74 Length of query: 582 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 560 Effective length of database: 18,508,616,841 Effective search space: 10364825430960 Effective search space used: 10364825430960 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
