ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf94h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064962:Os04g0683100 | 409 | e-114 | 2 | AK104757:Os04g0683100 | 391 | e-109 | 3 | AK060155:Os04g0683100 | 391 | e-109 | 4 | AK109009: | 228 | 6e-60 | 5 | AK099189:Os08g0398800 | 193 | 2e-49 | 6 | AK061260:Os08g0398800 | 193 | 2e-49 | 7 | L37528:Os01g0201700 | 32 | 0.62 | 8 | AY553724:Os01g0201700 | 32 | 0.62 | 9 | Os08g0419800:Os08g0419800 | 30 | 3.1 | 10 | AK065333:Os03g0454300 | 30 | 3.1 | 11 | AK111723:Os05g0203800 | 30 | 4.0 | 12 | AK120995:Os08g0541500 | 29 | 6.8 | 13 | AK105935:Os08g0562100 | 28 | 8.9 | 14 | AK102598:Os08g0562100 | 28 | 8.9 | 15 | AK071494:Os08g0562100 | 28 | 8.9 | 16 | AY428025:Os08g0465800 | 28 | 8.9 | 17 | AK060014:Os07g0530700 | 28 | 8.9 |
|---|
>AK064962:Os04g0683100 | Length = 259 Score = 409 bits (1052), Expect = e-114 Identities = 197/209 (94%), Positives = 201/209 (96%) Frame = +3 Query: 144 RTEAEEMVGAPTSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE 323 R E E + + +S VVNVYPLANYTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVE Sbjct: 51 RGEGEGKMVSSSSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVE 110 Query: 324 AILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQ 503 AILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQ Sbjct: 111 AILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQ 170 Query: 504 VGECVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFE 683 VGECVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHL+EREYFAVPRNLKLLAVPLFE Sbjct: 171 VGECVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFE 230 Query: 684 LYDNVQRYGPVISTIPQQLSRFQFNMVSS 770 LYDNVQRYGPVISTIPQQLSRFQFNMVSS Sbjct: 231 LYDNVQRYGPVISTIPQQLSRFQFNMVSS 259
>AK104757:Os04g0683100 | Length = 188 Score = 391 bits (1004), Expect = e-109 Identities = 186/188 (98%), Positives = 187/188 (99%) Frame = +3 Query: 207 ANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 386 ANYTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT Sbjct: 1 ANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 60 Query: 387 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC 566 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC Sbjct: 61 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC 120 Query: 567 PPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 746 PPHITKPKECKKLFIVHL+EREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR Sbjct: 121 PPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 180 Query: 747 FQFNMVSS 770 FQFNMVSS Sbjct: 181 FQFNMVSS 188
>AK060155:Os04g0683100 | Length = 188 Score = 391 bits (1004), Expect = e-109 Identities = 186/188 (98%), Positives = 187/188 (99%) Frame = +3 Query: 207 ANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 386 ANYTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT Sbjct: 1 ANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 60 Query: 387 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC 566 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC Sbjct: 61 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC 120 Query: 567 PPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 746 PPHITKPKECKKLFIVHL+EREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR Sbjct: 121 PPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 180 Query: 747 FQFNMVSS 770 FQFNMVSS Sbjct: 181 FQFNMVSS 188
>AK109009: | Length = 274 Score = 228 bits (581), Expect = 6e-60 Identities = 106/201 (52%), Positives = 139/201 (69%), Gaps = 5/201 (2%) Frame = +3 Query: 189 VNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 368 + +YPL+NYTFGTK+ + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL+ Sbjct: 29 IRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEGILVCHEHNHPHILM 88 Query: 369 LQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFP-----PNWQVGECVAVWWR 533 LQI N F KLPG L+ ++EIEG K +L S+LA F W+VG+ +A WWR Sbjct: 89 LQIANAFFKLPGDYLRAEDDEIEGFKARLNSRLAPTGTQFTGEGVNDEWEVGDTLAQWWR 148 Query: 534 PNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGP 713 PNFET MYP+ P H+T+PKECKKL+ + L + +VP+N+KLLAVPLFELYDN RYGP Sbjct: 149 PNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYGP 208 Query: 714 VISTIPQQLSRFQFNMVSS*G 776 +S IP LSR+ F + G Sbjct: 209 QLSAIPHLLSRYNFEFIDEEG 229
>AK099189:Os08g0398800 | Length = 226 Score = 193 bits (490), Expect = 2e-49 Identities = 95/218 (43%), Positives = 134/218 (61%), Gaps = 14/218 (6%) Frame = +3 Query: 156 EEMVGAPTSSV----VNVYPLANYTFGTKEPKMEKD----TSVADRLARMKVNYMKEGMR 311 +E AP+ + V +YPL Y FG ++ + ADR R+K N+ G+R Sbjct: 8 DEAAAAPSPAAAAARVEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLR 67 Query: 312 TSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAV------ 473 TSV +LLV+ +HPH+LLLQ+ N+ LPGGRL+PGE +++GLKRKL +KL+V Sbjct: 68 TSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDD 127 Query: 474 NSPSFPPNWQVGECVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRN 653 WQ+GEC+ +WWR F+ +PY P+ PKEC KLF++ L F VPRN Sbjct: 128 EDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRN 187 Query: 654 LKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMVS 767 +KLLAVPL +++DN Q YG +I+ IP LS+F N++S Sbjct: 188 MKLLAVPLSQIHDNAQVYGSIIAGIPNLLSKFSMNIIS 225
>AK061260:Os08g0398800 | Length = 226 Score = 193 bits (490), Expect = 2e-49 Identities = 95/218 (43%), Positives = 134/218 (61%), Gaps = 14/218 (6%) Frame = +3 Query: 156 EEMVGAPTSSV----VNVYPLANYTFGTKEPKMEKD----TSVADRLARMKVNYMKEGMR 311 +E AP+ + V +YPL Y FG ++ + ADR R+K N+ G+R Sbjct: 8 DEAAAAPSPAAAAARVEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLR 67 Query: 312 TSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAV------ 473 TSV +LLV+ +HPH+LLLQ+ N+ LPGGRL+PGE +++GLKRKL +KL+V Sbjct: 68 TSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDD 127 Query: 474 NSPSFPPNWQVGECVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRN 653 WQ+GEC+ +WWR F+ +PY P+ PKEC KLF++ L F VPRN Sbjct: 128 EDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRN 187 Query: 654 LKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMVS 767 +KLLAVPL +++DN Q YG +I+ IP LS+F N++S Sbjct: 188 MKLLAVPLSQIHDNAQVYGSIIAGIPNLLSKFSMNIIS 225
>L37528:Os01g0201700 | Length = 276 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -2 Query: 576 YVEGNKDTSRSQSLASTKQQHTHQPAS*VEMKVSSLQ 466 Y + N DTS S ++A QH Q +S + ++SSLQ Sbjct: 109 YKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQ 145
>AY553724:Os01g0201700 | Length = 273 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -2 Query: 576 YVEGNKDTSRSQSLASTKQQHTHQPAS*VEMKVSSLQ 466 Y + N DTS S ++A QH Q +S + ++SSLQ Sbjct: 95 YKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQ 131
>Os08g0419800:Os08g0419800 | Length = 725 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/52 (36%), Positives = 20/52 (38%) Frame = +2 Query: 230 GAQDGEGHLRRRPPRPHEGQLHERRNADKC*SYPTGARAQSPPHTVIANWKH 385 G Q G G L RR PRP G ERR + A P V A H Sbjct: 81 GRQCGHGRLARRGPRPRRGLPRERRGVAGLPRRQSRRPAGRPRRVVAARHPH 132
>AK065333:Os03g0454300 | Length = 171 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/69 (21%), Positives = 34/69 (49%) Frame = +2 Query: 821 SVSSTPNWLISSMTCFLSNHVSMNYAALLVYKLDMYHCWSLISRFRYYILNVLYVWCILW 1000 SV NW+ + +TC +++ ++ + + + +C + +LNV +V+C + Sbjct: 107 SVLQLTNWMRTDVTCMYCSYILISSRSRKILMVCFSNC--------FLLLNVFFVFCFIA 158 Query: 1001 LLFFVLIYL 1027 + +LI L Sbjct: 159 ICHILLIDL 167
>AK111723:Os05g0203800 | Length = 233 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -2 Query: 576 YVEGNKDTSRSQSLASTKQQHTHQPAS*VEMKVSSLQ 466 Y + N DTS + ++A QH Q A+ ++ ++++LQ Sbjct: 111 YKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQ 147
>AK120995:Os08g0541500 | Length = 733 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 11/96 (11%) Frame = +3 Query: 114 PEKKKSASAPRTEAEEMVGAPTSSVVNVYPLANYTFGTKEPKMEKD-----------TSV 260 P +K SASAP ++E++V P+S + +++ T T K+ + TS+ Sbjct: 339 PPRKSSASAPSDDSEKIVNKPSSPLRRTSGVSSNTNITNLVKIASNSKKLTDASASWTSL 398 Query: 261 ADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 368 LA++ +K + A+ +QE + LL Sbjct: 399 PPSLAKLGKELLKYRDAAQMAAVEAMQEASAAENLL 434
>AK105935:Os08g0562100 | Length = 433 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 321 EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGE 425 EA LL ++ H L GN FC LPG + PGE Sbjct: 400 EAELLAEKRCVAH--LTGEGNAFCDLPGDTMLPGE 432
>AK102598:Os08g0562100 | Length = 433 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 321 EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGE 425 EA LL ++ H L GN FC LPG + PGE Sbjct: 400 EAELLAEKRCVAH--LTGEGNAFCDLPGDTMLPGE 432
>AK071494:Os08g0562100 | Length = 433 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 321 EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGE 425 EA LL ++ H L GN FC LPG + PGE Sbjct: 400 EAELLAEKRCVAH--LTGEGNAFCDLPGDTMLPGE 432
>AY428025:Os08g0465800 | Length = 505 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Frame = +2 Query: 206 RQLH-VRHQGAQD------------GEGHLRRRPPRPHEGQLH-ERRNADKC*SYPTGAR 343 RQ+H VRH A + G+ RRRPPR H+G L E R A + AR Sbjct: 366 RQVHRVRHLRAPEEVRLDRAGVHHAGQRRARRRPPRRHQGGLQPEPRRAARLGHRQDPAR 425 Query: 344 AQSP 355 A P Sbjct: 426 AGRP 429
>AK060014:Os07g0530700 | Length = 119 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +2 Query: 251 HLRRRPPRPHEGQLHERRNADKC*SYPTGARAQSP 355 H R RP RPH G H R + GA A+SP Sbjct: 23 HGRPRPARPHAGGRHAGREVPAARAAAGGAVARSP 57 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,205,461 Number of extensions: 630089 Number of successful extensions: 1763 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1757 Number of HSP's successfully gapped: 17 Length of query: 369 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 267 Effective length of database: 11,315,673 Effective search space: 3021284691 Effective search space used: 3021284691 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
