ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94h08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A17, full insert sequence Length = 1211 Score = 886 bits (447), Expect = 0.0 Identities = 567/607 (93%) Strand = Plus / Plus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 cgtcgccggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 246 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 306 Query: 298 aagaaggaatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcaccccc 357 |||||||||||||||| ||||||||||| |||||| |||||||||| ||||| || |||| Sbjct: 307 aagaaggaatgcggaccagtgttgaagcaatcctattggtgcaagaacacaaccatcccc 366 Query: 358 acatactgttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagc 417 |||||||| | ||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 367 acatactgctgttgcaaattggtaatacattttgcaagcttcctggtggacgtttgaagc 426 Query: 418 ctggagaaaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaact 477 |||||||||||||||||||||| |||||||||||| | ||||| || ||||||||||||| Sbjct: 427 ctggagaaaatgaaattgagggtctgaaaagaaagttatgcagtaagcttgcagtgaact 486 Query: 478 caccttcatttccacctaactggcaggttggtgagtgtgttgctgtttggtggaggccaa 537 | ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 487 cgccttcctttccacctaactggcaggttggagagtgtgttgctgtatggtggaggccaa 546 Query: 538 actttgagaccgtgatgtatccttattgccctccacatataaccaagcccaaggaatgca 597 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 547 actttgagactgtgatgtatccttactgccctccacatataaccaagcccaaggagtgca 606 Query: 598 agaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaaggaacttga 657 ||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||| ||| Sbjct: 607 agaagcttttcattgttcacctatctgaaagagagtattttgctgttccgaggaacctga 666 Query: 658 agctacttgctgttccactgtttgaactctatgacaatgttcagcggtatggacctgtaa 717 |||| |||||||||||||||||||||||||||||||| |||||||| ||||| || || | Sbjct: 667 agctgcttgctgttccactgtttgaactctatgacaacgttcagcgatatgggccagtca 726 Query: 718 tttccaccatcccacagcagctgtctaggttccagttcaacatggtgagctcgtaagggt 777 |||||||||| || |||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 727 tttccaccattccgcagcagctgtctaggttccagttcaacatggttagctcgtgaaggt 786 Query: 778 gatgaga 784 ||||||| Sbjct: 787 gatgaga 793
>ref|NM_001060836.1| Oryza sativa (japonica cultivar-group) Os04g0683100 (Os04g0683100) mRNA, partial cds Length = 1208 Score = 878 bits (443), Expect = 0.0 Identities = 566/607 (93%) Strand = Plus / Plus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cgtcgccggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 244 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 297 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 245 agatggagaaggacacctccgtcgccgaccgcttcgcccgcatgaaggtcaactacatga 304 Query: 298 aagaaggaatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcaccccc 357 |||||||||||||||| ||||||||||| |||||| |||||||||| ||||| || |||| Sbjct: 305 aagaaggaatgcggaccagtgttgaagcaatcctattggtgcaagaacacaaccatcccc 364 Query: 358 acatactgttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagc 417 |||||||| | ||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 365 acatactgctgttgcaaattggtaatacattttgcaagcttcctggtggacgtttgaagc 424 Query: 418 ctggagaaaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaact 477 |||||||||||||||||||||| |||||||||||| | ||||| || ||||||||||||| Sbjct: 425 ctggagaaaatgaaattgagggtctgaaaagaaagttatgcagtaagcttgcagtgaact 484 Query: 478 caccttcatttccacctaactggcaggttggtgagtgtgttgctgtttggtggaggccaa 537 | ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 485 cgccttcctttccacctaactggcaggttggagagtgtgttgctgtatggtggaggccaa 544 Query: 538 actttgagaccgtgatgtatccttattgccctccacatataaccaagcccaaggaatgca 597 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 545 actttgagactgtgatgtatccttactgccctccacatataaccaagcccaaggagtgca 604 Query: 598 agaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaaggaacttga 657 ||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||| ||| Sbjct: 605 agaagcttttcattgttcacctatctgaaagagagtattttgctgttccgaggaacctga 664 Query: 658 agctacttgctgttccactgtttgaactctatgacaatgttcagcggtatggacctgtaa 717 |||| |||||||||||||||||||||||||||||||| |||||||| ||||| || || | Sbjct: 665 agctgcttgctgttccactgtttgaactctatgacaacgttcagcgatatgggccagtca 724 Query: 718 tttccaccatcccacagcagctgtctaggttccagttcaacatggtgagctcgtaagggt 777 |||||||||| || |||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 725 tttccaccattccgcagcagctgtctaggttccagttcaacatggttagctcgtgaaggt 784 Query: 778 gatgaga 784 ||||||| Sbjct: 785 gatgaga 791
>dbj|AK104757.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G07, full insert sequence Length = 1014 Score = 839 bits (423), Expect = 0.0 Identities = 540/579 (93%) Strand = Plus / Plus Query: 206 cgccaactacacgttcggcaccaaggagcccaagatggagaaggacacctccgtcgccga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgccaactacacgttcggcaccaaggagcccaagatggagaaggacacctccgtcgccga 60 Query: 266 ccgcctcgcccgcatgaaggtcaactacatgaaagaaggaatgcggacaagtgttgaagc 325 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 61 ccgcctcgcccgcatgaaggtcaactacatgaaagaaggaatgcggaccagtgttgaagc 120 Query: 326 tatcctactggtgcaagagcacaatcacccccacatactgttattgcaaattggaaacac 385 |||||| |||||||||| ||||| || |||||||||||| | ||||||||||| || || Sbjct: 121 aatcctattggtgcaagaacacaaccatccccacatactgctgttgcaaattggtaatac 180 Query: 386 attttgcaaacttcctggtggacgtttgaagcctggagaaaatgaaattgagggcctgaa 445 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 181 attttgcaagcttcctggtggacgtttgaagcctggagaaaatgaaattgagggtctgaa 240 Query: 446 aagaaagctgtgcagcaaacttgcagtgaactcaccttcatttccacctaactggcaggt 505 ||||||| | ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 241 aagaaagttatgcagtaagcttgcagtgaactcgccttcctttccacctaactggcaggt 300 Query: 506 tggtgagtgtgttgctgtttggtggaggccaaactttgagaccgtgatgtatccttattg 565 ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 301 tggagagtgtgttgctgtatggtggaggccaaactttgagactgtgatgtatccttactg 360 Query: 566 ccctccacatataaccaagcccaaggaatgcaagaagcttttcattgttcatctaactga 625 ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| Sbjct: 361 ccctccacatataaccaagcccaaggagtgcaagaagcttttcattgttcacctatctga 420 Query: 626 aagagagtatttcgctgttccaaggaacttgaagctacttgctgttccactgtttgaact 685 |||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||| Sbjct: 421 aagagagtattttgctgttccgaggaacctgaagctgcttgctgttccactgtttgaact 480 Query: 686 ctatgacaatgttcagcggtatggacctgtaatttccaccatcccacagcagctgtctag 745 ||||||||| |||||||| ||||| || || ||||||||||| || |||||||||||||| Sbjct: 481 ctatgacaacgttcagcgatatgggccagtcatttccaccattccgcagcagctgtctag 540 Query: 746 gttccagttcaacatggtgagctcgtaagggtgatgaga 784 |||||||||||||||||| ||||||| | |||||||||| Sbjct: 541 gttccagttcaacatggttagctcgtgaaggtgatgaga 579
>dbj|AK060155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F03, full insert sequence Length = 1014 Score = 839 bits (423), Expect = 0.0 Identities = 540/579 (93%) Strand = Plus / Plus Query: 206 cgccaactacacgttcggcaccaaggagcccaagatggagaaggacacctccgtcgccga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgccaactacacgttcggcaccaaggagcccaagatggagaaggacacctccgtcgccga 60 Query: 266 ccgcctcgcccgcatgaaggtcaactacatgaaagaaggaatgcggacaagtgttgaagc 325 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 61 ccgcctcgcccgcatgaaggtcaactacatgaaagaaggaatgcggaccagtgttgaagc 120 Query: 326 tatcctactggtgcaagagcacaatcacccccacatactgttattgcaaattggaaacac 385 |||||| |||||||||| ||||| || |||||||||||| | ||||||||||| || || Sbjct: 121 aatcctattggtgcaagaacacaaccatccccacatactgctgttgcaaattggtaatac 180 Query: 386 attttgcaaacttcctggtggacgtttgaagcctggagaaaatgaaattgagggcctgaa 445 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 181 attttgcaagcttcctggtggacgtttgaagcctggagaaaatgaaattgagggtctgaa 240 Query: 446 aagaaagctgtgcagcaaacttgcagtgaactcaccttcatttccacctaactggcaggt 505 ||||||| | ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 241 aagaaagttatgcagtaagcttgcagtgaactcgccttcctttccacctaactggcaggt 300 Query: 506 tggtgagtgtgttgctgtttggtggaggccaaactttgagaccgtgatgtatccttattg 565 ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 301 tggagagtgtgttgctgtatggtggaggccaaactttgagactgtgatgtatccttactg 360 Query: 566 ccctccacatataaccaagcccaaggaatgcaagaagcttttcattgttcatctaactga 625 ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| Sbjct: 361 ccctccacatataaccaagcccaaggagtgcaagaagcttttcattgttcacctatctga 420 Query: 626 aagagagtatttcgctgttccaaggaacttgaagctacttgctgttccactgtttgaact 685 |||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||| Sbjct: 421 aagagagtattttgctgttccgaggaacctgaagctgcttgctgttccactgtttgaact 480 Query: 686 ctatgacaatgttcagcggtatggacctgtaatttccaccatcccacagcagctgtctag 745 ||||||||| |||||||| ||||| || || ||||||||||| || |||||||||||||| Sbjct: 481 ctatgacaacgttcagcgatatgggccagtcatttccaccattccgcagcagctgtctag 540 Query: 746 gttccagttcaacatggtgagctcgtaagggtgatgaga 784 |||||||||||||||||| ||||||| | |||||||||| Sbjct: 541 gttccagttcaacatggttagctcgtgaaggtgatgaga 579
>gb|DQ244894.1| Zea mays clone 11595 mRNA sequence Length = 1109 Score = 793 bits (400), Expect = 0.0 Identities = 544/592 (91%) Strand = Plus / Plus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 cgtcgtcggtggttaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 217 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 277 Query: 298 aagaaggaatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcaccccc 357 ||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||| | Sbjct: 278 aagaaggaatgcgtacaagtgttgaagcaatcctattggtgcaagagcacaaccaccctc 337 Query: 358 acatactgttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagc 417 |||||||| | ||||||| ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 338 acatactgctcctgcaaatcggaaatacattctgcaaacttcctggtggacggttgaagc 397 Query: 418 ctggagaaaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaact 477 |||||||||||||||| || || |||||||||||||||||||||||||||| ||||||| Sbjct: 398 ctggagaaaatgaaatcgaaggtttgaaaagaaagctgtgcagcaaacttgctgtgaact 457 Query: 478 caccttcatttccacctaactggcaggttggtgagtgtgttgctgtttggtggaggccaa 537 | ||||| || |||||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 458 cgccttccttcccacctaactggcaggttggagagtgtgttgctgtgtggtggaggccga 517 Query: 538 actttgagaccgtgatgtatccttattgccctccacatataaccaagcccaaggaatgca 597 | |||||||| |||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 518 attttgagactgtgatgtatccttactgccctccacatatcaccaagcccaaggagtgca 577 Query: 598 agaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaaggaacttga 657 |||| |||||||| ||||| ||| | |||||||||||||| |||||||||||||| |||| Sbjct: 578 agaaacttttcatcgttcacctatccgaaagagagtattttgctgttccaaggaatttga 637 Query: 658 agctacttgctgttccactgtttgaactctatgacaatgttcagcggtatggacctgtaa 717 |||| ||||||||||| || ||||||||||| || ||| ||||||| ||||| ||||| | Sbjct: 638 agctgcttgctgttccgctctttgaactctacgataatattcagcgatatgggcctgtca 697 Query: 718 tttccaccatcccacagcagctgtctaggttccagttcaacatggtgagctc 769 | ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 698 tctccaccatcccgcagcagctttctaggttccagttcaacatggtgagctc 749
>gb|AY104258.1| Zea mays PCO079129 mRNA sequence Length = 1187 Score = 755 bits (381), Expect = 0.0 Identities = 550/605 (90%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 cgtcgtcggtggttaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 209 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 297 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 210 agatggagaaggacacctccgtcgccgaccgcctcgctcgcatgaaggtcaactacatga 269 Query: 298 aagaaggaatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcaccccc 357 ||||||||||||| |||||||||||||| |||||| |||||||||||||||| || || | Sbjct: 270 aagaaggaatgcgtacaagtgttgaagcaatcctattggtgcaagagcacaaccatcctc 329 Query: 358 acatactgttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagc 417 |||||||| | ||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 330 acatactgctcctgcaaatcggtaatacattctgcaaacttcctggtggacggttgaagc 389 Query: 418 ctggagaaaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaact 477 |||||||||||||||| ||||| ||||||||||| | |||||||||||||| ||||||| Sbjct: 390 ctggagaaaatgaaatcgagggtttgaaaagaaagttatgcagcaaacttgctgtgaact 449 Query: 478 caccttcatttccacctaactggcaggttggtgagtgtgttgctgtttggtggaggccaa 537 | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| | Sbjct: 450 cgccttcctttccacctaactggcaggttggagagtgcgttgctgtgtggtggaggccga 509 Query: 538 actttgagaccgtgatgtatccttattgccctccacatataaccaagcccaaggaatgca 597 |||||||||| |||||||||||||| || ||||||||||| || ||||||||||| |||| Sbjct: 510 actttgagactgtgatgtatccttactgtcctccacatatcactaagcccaaggagtgca 569 Query: 598 agaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaaggaacttga 657 |||| |||||||||||||| ||| | |||||||||||||| |||||||||||||| ||| Sbjct: 570 agaaacttttcattgttcacctatccgaaagagagtattttgctgttccaaggaatctga 629 Query: 658 agctacttgctgttccactgtttgaactctatgacaatgttcagcggtatggacctgtaa 717 | || |||||||||||||||||||||||||| |||||||||||| |||| || ||||| | Sbjct: 630 aactgcttgctgttccactgtttgaactctacgacaatgttcagaggtacgggcctgtca 689 Query: 718 tttccaccatcccacagcagctgtctaggttccagttcaacatggtgagctcgtaagggt 777 | || |||||||| |||||||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 690 tctctaccatcccgcagcagctttctaggttccagttcaacatggttagctc-ttagggt 748 Query: 778 gatga 782 ||||| Sbjct: 749 gatga 753
>gb|BT018459.1| Zea mays clone EL01N0413H10.d mRNA sequence Length = 1316 Score = 700 bits (353), Expect = 0.0 Identities = 544/605 (89%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 cgtcgccggtggtcaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 634 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatga 297 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 635 agatggagaaggacacctccgtcgccgaccgcctcgcccgtatgaaggtcaactacatga 694 Query: 298 aagaaggaatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcaccccc 357 ||||||||||||| |||||||||||||| |||||| |||||||||||||||| || || | Sbjct: 695 aagaaggaatgcgtacaagtgttgaagcaatcctattggtgcaagagcacaaccatcctc 754 Query: 358 acatactgttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagc 417 |||||||| | ||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 755 acatactgctcctgcaaatcgggaatacattctgcaaacttcctggtggacggttgaagc 814 Query: 418 ctggagaaaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaact 477 |||||||||||||||| ||||| ||||||||||| | |||||||||||||| ||||||| Sbjct: 815 ctggagaaaatgaaatcgagggtttgaaaagaaagttatgcagcaaacttgctgtgaact 874 Query: 478 caccttcatttccacctaactggcaggttggtgagtgtgttgctgtttggtggaggccaa 537 | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| | Sbjct: 875 cgccttcctttccacctaactggcaggttggagagtgcgttgctgtgtggtggaggccga 934 Query: 538 actttgagaccgtgatgtatccttattgccctccacatataaccaagcccaaggaatgca 597 |||||||||| |||||||||||||| || ||||||||||| || ||||||||||| |||| Sbjct: 935 actttgagactgtgatgtatccttactgtcctccacatatcactaagcccaaggagtgca 994 Query: 598 agaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaaggaacttga 657 |||| |||||||||||||| ||| | |||||||||||||| |||||||||||||| ||| Sbjct: 995 agaaacttttcattgttcacctatccgaaagagagtattttgctgttccaaggaatctga 1054 Query: 658 agctacttgctgttccactgtttgaactctatgacaatgttcagcggtatggacctgtaa 717 | || ||||||||||||||| | ||||| ||||||||||||||||| || ||||| | Sbjct: 1055 aactgcttgctgttccactg-tccccctctacgacaatgttcagcggtacgggcctgtca 1113 Query: 718 tttccaccatcccacagcagctgtctaggttccagttcaacatggtgagctcgtaagggt 777 | || |||| ||| |||||||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 1114 tctctaccaccccgcagcagctttctaggttccagttcaacatggttagctc-ttagggt 1172 Query: 778 gatga 782 ||||| Sbjct: 1173 gatga 1177
>gb|BT012871.1| Lycopersicon esculentum clone 113969R, mRNA sequence Length = 1037 Score = 319 bits (161), Expect = 1e-83 Identities = 443/537 (82%) Strand = Plus / Plus Query: 225 accaaggagcccaagatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaag 284 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || ||||| Sbjct: 252 accaaggagcccaaaatggaaaaggacacctccgtcgccgatcgccttgctcgtatgaaa 311 Query: 285 gtcaactacatgaaagaaggaatgcggacaagtgttgaagctatcctactggtgcaagag 344 |||||||| | ||| || || ||| |||| || ||||||| || ||| |||| ||||| Sbjct: 312 gtcaactatacgaaggagggcatgaggactagcgttgaaggaattctattggtacaagaa 371 Query: 345 cacaatcacccccacatactgttattgcaaattggaaacacattttgcaaacttcctggt 404 |||||||| || ||||| || ||||||||||||| |||||||| ||||||||||| ||| Sbjct: 372 cacaatcatcctcacattcttctattgcaaattgggaacacattctgcaaacttccaggt 431 Query: 405 ggacgtttgaagcctggagaaaatgaaattgagggcctgaaaagaaagctgtgcagcaaa 464 ||||||||||| || ||||| || |||||||| || ||||||| || |||| || ||| Sbjct: 432 ggacgtttgaaaccaggagagaacgaaattgaaggtttgaaaaggaaactgtctagtaaa 491 Query: 465 cttgcagtgaactcaccttcatttccacctaactggcaggttggtgagtgtgttgctgtt 524 ||||||| || || ||| ||| || || |||||||| ||||||||||| || | Sbjct: 492 cttgcagctaattctcctggcattcagccaaattggcaggtaggtgagtgtgtggccatc 551 Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||||||||||| ||||| ||| | |||||||| ||||| |||||||| ||||| || Sbjct: 552 tggtggaggccaaattttgaaaccataatgtatccatattgtcctccacacataacaaaa 611 Query: 585 cccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgtt 644 |||||||| || |||||||| ||| ||||||||||| ||||||||||||| || ||||| Sbjct: 612 cccaaggagtgtaagaagctcttcgttgttcatctatctgaaagagagtactttgctgtc 671 Query: 645 ccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcagcgg 704 |||| || ||||||| ||||| || ||| |||||||||| ||||||||||||||| | Sbjct: 672 ccaaaaaatctgaagcttcttgcagtgccattgtttgaactttatgacaatgttcagaga 731 Query: 705 tatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaacatg 761 ||||||||||| || ||||| || || || ||||| || |||||||||||||||||| Sbjct: 732 tatggacctgtgatatccacgattcctcaacagctttccaggttccagttcaacatg 788
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete sequence Length = 84361 Score = 214 bits (108), Expect = 5e-52 Identities = 111/112 (99%) Strand = Plus / Minus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1083 cgtcgccggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 1024 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaa 289 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1023 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaa 972 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 290 ctacatgaaagaaggaatgcggacaagtgttgaagctatcctactggtg 338 |||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 262 ctacatgaaagaaggaatgcggaccagtgttgaagcaatcctattggtg 214 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 335 ggtgcaagagcacaatcacccccacatactgttattgcaaattggaaacacattttgcaa 394 ||||||||| ||||| || |||||||||||| | ||||||||||| || ||||||||||| Sbjct: 64 ggtgcaagaacacaaccatccccacatactgctgttgcaaattggtaatacattttgcaa 5
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 214 bits (108), Expect = 5e-52 Identities = 111/112 (99%) Strand = Plus / Minus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96030 cgtcgccggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 95971 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaa 289 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95970 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaa 95919 Score = 161 bits (81), Expect = 7e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 589 aggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaa 648 |||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| | Sbjct: 93687 aggagtgcaagaagcttttcattgttcacctatctgaaagagagtattttgctgttccga 93628 Query: 649 ggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcag 701 ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 93627 ggaacctgaagctgcttgctgttccactgtttgaactctatgacaacgttcag 93575 Score = 149 bits (75), Expect = 3e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 501 caggttggtgagtgtgttgctgtttggtggaggccaaactttgagaccgtgatgtatcct 560 |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 94057 caggttggagagtgtgttgctgtatggtggaggccaaactttgagactgtgatgtatcct 93998 Query: 561 tattgccctccacatataaccaagcccaagg 591 || |||||||||||||||||||||||||||| Sbjct: 93997 tactgccctccacatataaccaagcccaagg 93967 Score = 125 bits (63), Expect = 4e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 335 ggtgcaagagcacaatcacccccacatactgttattgcaaattggaaacacattttgcaa 394 ||||||||| ||||| || |||||||||||| | ||||||||||| || ||||||||||| Sbjct: 95011 ggtgcaagaacacaaccatccccacatactgctgttgcaaattggtaatacattttgcaa 94952 Query: 395 acttcctggtggacgtttgaagcctggagaaaatg 429 |||||||||||||||||||||||||||||||||| Sbjct: 94951 gcttcctggtggacgtttgaagcctggagaaaatg 94917 Score = 99.6 bits (50), Expect = 2e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 699 cagcggtatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaac 758 ||||| ||||| || || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 92982 cagcgatatgggccagtcatttccaccattccgcagcagctgtctaggttccagttcaac 92923 Query: 759 atggtgagctcgtaagggtgatgaga 784 ||||| ||||||| | |||||||||| Sbjct: 92922 atggttagctcgtgaaggtgatgaga 92897 Score = 97.6 bits (49), Expect = 8e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 429 gaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaactcaccttcattt 488 ||||||||||| |||||||||||| | ||||| || |||||||||||||| ||||| ||| Sbjct: 94821 gaaattgagggtctgaaaagaaagttatgcagtaagcttgcagtgaactcgccttccttt 94762 Query: 489 ccacctaactggcaggt 505 ||||||||||||||||| Sbjct: 94761 ccacctaactggcaggt 94745 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 290 ctacatgaaagaaggaatgcggacaagtgttgaagctatcctactggtg 338 |||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 95209 ctacatgaaagaaggaatgcggaccagtgttgaagcaatcctattggtg 95161
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 206 bits (104), Expect = 1e-49 Identities = 110/112 (98%) Strand = Plus / Minus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34916508 cgtcgccggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 34916449 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaa 289 |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 34916448 agatggagaaggacacctccgtcgccgaccgcttcgcccgcatgaaggtcaa 34916397 Score = 161 bits (81), Expect = 7e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 589 aggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaa 648 |||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| | Sbjct: 34914167 aggagtgcaagaagcttttcattgttcacctatctgaaagagagtattttgctgttccga 34914108 Query: 649 ggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcag 701 ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 34914107 ggaacctgaagctgcttgctgttccactgtttgaactctatgacaacgttcag 34914055 Score = 149 bits (75), Expect = 3e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 501 caggttggtgagtgtgttgctgtttggtggaggccaaactttgagaccgtgatgtatcct 560 |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 34914537 caggttggagagtgtgttgctgtatggtggaggccaaactttgagactgtgatgtatcct 34914478 Query: 561 tattgccctccacatataaccaagcccaagg 591 || |||||||||||||||||||||||||||| Sbjct: 34914477 tactgccctccacatataaccaagcccaagg 34914447 Score = 125 bits (63), Expect = 4e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 335 ggtgcaagagcacaatcacccccacatactgttattgcaaattggaaacacattttgcaa 394 ||||||||| ||||| || |||||||||||| | ||||||||||| || ||||||||||| Sbjct: 34915491 ggtgcaagaacacaaccatccccacatactgctgttgcaaattggtaatacattttgcaa 34915432 Query: 395 acttcctggtggacgtttgaagcctggagaaaatg 429 |||||||||||||||||||||||||||||||||| Sbjct: 34915431 gcttcctggtggacgtttgaagcctggagaaaatg 34915397 Score = 99.6 bits (50), Expect = 2e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 699 cagcggtatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaac 758 ||||| ||||| || || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 34913460 cagcgatatgggccagtcatttccaccattccgcagcagctgtctaggttccagttcaac 34913401 Query: 759 atggtgagctcgtaagggtgatgaga 784 ||||| ||||||| | |||||||||| Sbjct: 34913400 atggttagctcgtgaaggtgatgaga 34913375 Score = 97.6 bits (49), Expect = 8e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 429 gaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaactcaccttcattt 488 ||||||||||| |||||||||||| | ||||| || |||||||||||||| ||||| ||| Sbjct: 34915301 gaaattgagggtctgaaaagaaagttatgcagtaagcttgcagtgaactcgccttccttt 34915242 Query: 489 ccacctaactggcaggt 505 ||||||||||||||||| Sbjct: 34915241 ccacctaactggcaggt 34915225 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 290 ctacatgaaagaaggaatgcggacaagtgttgaagctatcctactggtg 338 |||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 34915689 ctacatgaaagaaggaatgcggaccagtgttgaagcaatcctattggtg 34915641
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 206 bits (104), Expect = 1e-49 Identities = 110/112 (98%) Strand = Plus / Minus Query: 178 cgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 237 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122621 cgtcgccggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagccca 122562 Query: 238 agatggagaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaa 289 |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122561 agatggagaaggacacctccgtcgccgaccgcttcgcccgcatgaaggtcaa 122510 Score = 161 bits (81), Expect = 7e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 589 aggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgttccaa 648 |||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| | Sbjct: 120280 aggagtgcaagaagcttttcattgttcacctatctgaaagagagtattttgctgttccga 120221 Query: 649 ggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcag 701 ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 120220 ggaacctgaagctgcttgctgttccactgtttgaactctatgacaacgttcag 120168 Score = 149 bits (75), Expect = 3e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 501 caggttggtgagtgtgttgctgtttggtggaggccaaactttgagaccgtgatgtatcct 560 |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 120650 caggttggagagtgtgttgctgtatggtggaggccaaactttgagactgtgatgtatcct 120591 Query: 561 tattgccctccacatataaccaagcccaagg 591 || |||||||||||||||||||||||||||| Sbjct: 120590 tactgccctccacatataaccaagcccaagg 120560 Score = 125 bits (63), Expect = 4e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 335 ggtgcaagagcacaatcacccccacatactgttattgcaaattggaaacacattttgcaa 394 ||||||||| ||||| || |||||||||||| | ||||||||||| || ||||||||||| Sbjct: 121604 ggtgcaagaacacaaccatccccacatactgctgttgcaaattggtaatacattttgcaa 121545 Query: 395 acttcctggtggacgtttgaagcctggagaaaatg 429 |||||||||||||||||||||||||||||||||| Sbjct: 121544 gcttcctggtggacgtttgaagcctggagaaaatg 121510 Score = 99.6 bits (50), Expect = 2e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 699 cagcggtatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaac 758 ||||| ||||| || || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 119573 cagcgatatgggccagtcatttccaccattccgcagcagctgtctaggttccagttcaac 119514 Query: 759 atggtgagctcgtaagggtgatgaga 784 ||||| ||||||| | |||||||||| Sbjct: 119513 atggttagctcgtgaaggtgatgaga 119488 Score = 97.6 bits (49), Expect = 8e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 429 gaaattgagggcctgaaaagaaagctgtgcagcaaacttgcagtgaactcaccttcattt 488 ||||||||||| |||||||||||| | ||||| || |||||||||||||| ||||| ||| Sbjct: 121414 gaaattgagggtctgaaaagaaagttatgcagtaagcttgcagtgaactcgccttccttt 121355 Query: 489 ccacctaactggcaggt 505 ||||||||||||||||| Sbjct: 121354 ccacctaactggcaggt 121338 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 290 ctacatgaaagaaggaatgcggacaagtgttgaagctatcctactggtg 338 |||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 121802 ctacatgaaagaaggaatgcggaccagtgttgaagcaatcctattggtg 121754
>dbj|AK228476.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-08-C23 Length = 1051 Score = 174 bits (88), Expect = 4e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 157 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 216 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatgaaagaagg 304 ||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| || Sbjct: 217 aaaggacacctccgtcgccgaccggctcgctcgtatgaaaatcaactatatgaaagaggg 276 Query: 305 aatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcacccccacatact 364 ||| |||| || ||||||| || |||||||||||||| ||||| || || || ||||| Sbjct: 277 catgaggactagcgttgaagggattctactggtgcaagaacacaaccatcctcatatact 336 Query: 365 gttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggaga 424 | | |||||||| |||||||| ||||||||||| |||||||| |||||||||| || Sbjct: 337 tctgctacaaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtga 396 Query: 425 aaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttg 468 ||||||| ||| || ||||||||||||||| ||| ||||||| Sbjct: 397 aaatgaagctgatggtctgaaaagaaagctgaccagtaaacttg 440 Score = 81.8 bits (41), Expect = 5e-12 Identities = 188/237 (79%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||| | ||||||||||| ||| ||||||| || ||||||||||| || || || || Sbjct: 497 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcctcacatcacgaaa 556 Query: 585 cccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgtt 644 || ||||||||||||| || | ||||||||| | |||| | |||||| || ||||| Sbjct: 557 ccaaaggaatgcaagagactctacattgttcacttgtctgagaaagagtactttgctgtg 616 Query: 645 ccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcagcgg 704 || | || |||||||| | || || || |||| ||||||||||||||||||||| | Sbjct: 617 cccaaaaatttgaagctcttggccgtccctttgttcgaactctatgacaatgttcagaga 676 Query: 705 tatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaacatg 761 |||||||| || || || ||||| || |||||||| || || ||||| ||||||||| Sbjct: 677 tatggaccggttatatcaaccattccgcagcagctatccagattccatttcaacatg 733
>ref|NM_118687.2| Arabidopsis thaliana unknown protein (AT4G25550) mRNA, complete cds Length = 1041 Score = 174 bits (88), Expect = 4e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 157 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 216 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatgaaagaagg 304 ||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| || Sbjct: 217 aaaggacacctccgtcgccgaccggctcgctcgtatgaaaatcaactatatgaaagaggg 276 Query: 305 aatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcacccccacatact 364 ||| |||| || ||||||| || |||||||||||||| ||||| || || || ||||| Sbjct: 277 catgaggactagcgttgaagggattctactggtgcaagaacacaaccatcctcatatact 336 Query: 365 gttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggaga 424 | | |||||||| |||||||| ||||||||||| |||||||| |||||||||| || Sbjct: 337 tctgctacaaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtga 396 Query: 425 aaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttg 468 ||||||| ||| || ||||||||||||||| ||| ||||||| Sbjct: 397 aaatgaagctgatggtctgaaaagaaagctgaccagtaaacttg 440 Score = 81.8 bits (41), Expect = 5e-12 Identities = 188/237 (79%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||| | ||||||||||| ||| ||||||| || ||||||||||| || || || || Sbjct: 497 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcctcacatcacgaaa 556 Query: 585 cccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgtt 644 || ||||||||||||| || | ||||||||| | |||| | |||||| || ||||| Sbjct: 557 ccaaaggaatgcaagagactctacattgttcacttgtctgagaaagagtactttgctgtg 616 Query: 645 ccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcagcgg 704 || | || |||||||| | || || || |||| ||||||||||||||||||||| | Sbjct: 617 cccaaaaatttgaagctcttggccgtccctttgttcgaactctatgacaatgttcagaga 676 Query: 705 tatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaacatg 761 |||||||| || || || ||||| || |||||||| || || ||||| ||||||||| Sbjct: 677 tatggaccggttatatcaaccattccgcagcagctatccagattccatttcaacatg 733
>gb|BT005519.1| Arabidopsis thaliana clone U50693 unknown protein (At4g25550) mRNA, complete cds Length = 634 Score = 174 bits (88), Expect = 4e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 15 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 74 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatgaaagaagg 304 ||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| || Sbjct: 75 aaaggacacctccgtcgccgaccggctcgctcgtatgaaaatcaactatatgaaagaggg 134 Query: 305 aatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcacccccacatact 364 ||| |||| || ||||||| || |||||||||||||| ||||| || || || ||||| Sbjct: 135 catgaggactagcgttgaagggattctactggtgcaagaacacaaccatcctcatatact 194 Query: 365 gttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggaga 424 | | |||||||| |||||||| ||||||||||| |||||||| |||||||||| || Sbjct: 195 tctgctacaaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtga 254 Query: 425 aaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttg 468 ||||||| ||| || ||||||||||||||| ||| ||||||| Sbjct: 255 aaatgaagctgatggtctgaaaagaaagctgaccagtaaacttg 298 Score = 81.8 bits (41), Expect = 5e-12 Identities = 188/237 (79%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||| | ||||||||||| ||| ||||||| || ||||||||||| || || || || Sbjct: 355 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcctcacatcacgaaa 414 Query: 585 cccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgtt 644 || ||||||||||||| || | ||||||||| | |||| | |||||| || ||||| Sbjct: 415 ccaaaggaatgcaagagactctacattgttcacttgtctgagaaagagtactttgctgtg 474 Query: 645 ccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcagcgg 704 || | || |||||||| | || || || |||| ||||||||||||||||||||| | Sbjct: 475 cccaaaaatttgaagctcttggccgtccctttgttcgaactctatgacaatgttcagaga 534 Query: 705 tatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaacatg 761 |||||||| || || || ||||| || |||||||| || || ||||| ||||||||| Sbjct: 535 tatggaccggttatatcaaccattccgcagcagctatccagattccatttcaacatg 591
>dbj|AK118070.1| Arabidopsis thaliana At4g25550 mRNA for unknown protein, complete cds, clone: RAFL19-31-N23 Length = 972 Score = 174 bits (88), Expect = 4e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 157 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 216 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatgaaagaagg 304 ||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| || Sbjct: 217 aaaggacacctccgtcgccgaccggctcgctcgtatgaaaatcaactatatgaaagaggg 276 Query: 305 aatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcacccccacatact 364 ||| |||| || ||||||| || |||||||||||||| ||||| || || || ||||| Sbjct: 277 catgaggactagcgttgaagggattctactggtgcaagaacacaaccatcctcatatact 336 Query: 365 gttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggaga 424 | | |||||||| |||||||| ||||||||||| |||||||| |||||||||| || Sbjct: 337 tctgctacaaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtga 396 Query: 425 aaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttg 468 ||||||| ||| || ||||||||||||||| ||| ||||||| Sbjct: 397 aaatgaagctgatggtctgaaaagaaagctgaccagtaaacttg 440 Score = 81.8 bits (41), Expect = 5e-12 Identities = 188/237 (79%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||| | ||||||||||| ||| ||||||| || ||||||||||| || || || || Sbjct: 497 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcctcacatcacgaaa 556 Query: 585 cccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgctgtt 644 || ||||||||||||| || | ||||||||| | |||| | |||||| || ||||| Sbjct: 557 ccaaaggaatgcaagagactctacattgttcacttgtctgagaaagagtactttgctgtg 616 Query: 645 ccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcagcgg 704 || | || |||||||| | || || || |||| ||||||||||||||||||||| | Sbjct: 617 cccaaaaatttgaagctcttggccgtccctttgttcgaactctatgacaatgttcagaga 676 Query: 705 tatggacctgtaatttccaccatcccacagcagctgtctaggttccagttcaacatg 761 |||||||| || || || ||||| || |||||||| || || ||||| ||||||||| Sbjct: 677 tatggaccggttatatcaaccattccgcagcagctatccagattccatttcaacatg 733
>emb|BX828932.1|CNS0A2IL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1001 Score = 174 bits (88), Expect = 4e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 138 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 197 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatgaaagaagg 304 ||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| || Sbjct: 198 aaaggacacctccgtcgccgaccggctcgctcgtatgaaaatcaactatatgaaagaggg 257 Query: 305 aatgcggacaagtgttgaagctatcctactggtgcaagagcacaatcacccccacatact 364 ||| |||| || ||||||| || |||||||||||||| ||||| || || || ||||| Sbjct: 258 catgaggactagcgttgaagggattctactggtgcaagaacacaaccatcctcatatact 317 Query: 365 gttattgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggaga 424 | | |||||||| |||||||| ||||||||||| |||||||| |||||||||| || Sbjct: 318 tctgctacaaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtga 377 Query: 425 aaatgaaattgagggcctgaaaagaaagctgtgcagcaaacttg 468 ||||||| ||| || ||||||||||||||| ||| ||||||| Sbjct: 378 aaatgaagctgatggtctgaaaagaaagctgaccagtaaacttg 421 Score = 56.0 bits (28), Expect = 3e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||| | ||||||||||| ||| ||||||| || ||||||||||| || || || || Sbjct: 478 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcctcacatcacgaaa 537 Query: 585 cccaaggaatgcaaga 600 || ||||||||||||| Sbjct: 538 ccaaaggaatgcaaga 553 Score = 50.1 bits (25), Expect = 0.017 Identities = 34/37 (91%) Strand = Plus / Plus Query: 676 tgtttgaactctatgacaatgttcagcggtatggacc 712 |||| ||||||||||||||||||||| | |||||||| Sbjct: 630 tgttcgaactctatgacaatgttcagagatatggacc 666
>dbj|AK220576.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-95-A13 Length = 598 Score = 97.6 bits (49), Expect = 8e-17 Identities = 127/153 (83%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 157 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 216 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaaggtcaactacatgaaagaagg 304 ||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||| || Sbjct: 217 aaaggacacctccgtcgccgaccggctcgctcgtatgaaaatcaactatatgaaagaggg 276 Query: 305 aatgcggacaagtgttgaagctatcctactggt 337 ||| |||| || ||||||| || |||||||| Sbjct: 277 catgaggactagcgttgaagggattctactggt 309
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 83.8 bits (42), Expect = 1e-12 Identities = 85/100 (85%), Gaps = 7/100 (7%) Strand = Plus / Plus Query: 197 gtacccgctcgccaactacacgttcggcaccaaggagcccaagatggagaaggacacctc 256 |||||||||||||| |||||||||||| ||||||||||||| |||||| | || |||||| Sbjct: 21567060 gtacccgctcgccagctacacgttcggtaccaaggagcccaggatggaaaggggcacctc 21567119 Query: 257 cgtcgccgacc-------gcctcgcccgcatgaaggtcaa 289 ||| |||||| |||||||||||||||||||||| Sbjct: 21567120 tgtcaccgaccggcgactgcctcgcccgcatgaaggtcaa 21567159
>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0006G05 Length = 56865 Score = 83.8 bits (42), Expect = 1e-12 Identities = 85/100 (85%), Gaps = 7/100 (7%) Strand = Plus / Plus Query: 197 gtacccgctcgccaactacacgttcggcaccaaggagcccaagatggagaaggacacctc 256 |||||||||||||| |||||||||||| ||||||||||||| |||||| | || |||||| Sbjct: 13434 gtacccgctcgccagctacacgttcggtaccaaggagcccaggatggaaaggggcacctc 13493 Query: 257 cgtcgccgacc-------gcctcgcccgcatgaaggtcaa 289 ||| |||||| |||||||||||||||||||||| Sbjct: 13494 tgtcaccgaccggcgactgcctcgcccgcatgaaggtcaa 13533
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 77.8 bits (39), Expect = 8e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 130772 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 130831 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaa 283 ||||||||||||||||||||||| ||||| || ||||| Sbjct: 130832 aaaggacacctccgtcgccgaccggctcgctcgtatgaa 130870 Score = 67.9 bits (34), Expect = 7e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 372 caaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggagaaaatg 429 |||||||| |||||||| ||||||||||| |||||||| |||||||||| ||||||| Sbjct: 132125 caaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtgaaaatg 132182 Score = 46.1 bits (23), Expect = 0.27 Identities = 41/47 (87%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctcc 571 |||||| | ||||||||||| ||| ||||||| || ||||||||||| Sbjct: 132698 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcc 132744 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 676 tgtttgaactctatgacaatgttcag 701 |||| ||||||||||||||||||||| Sbjct: 132932 tgttcgaactctatgacaatgttcag 132957
>emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2 (ESSA project) Length = 80386 Score = 77.8 bits (39), Expect = 8e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || ||||| |||||| |||| Sbjct: 24046 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaggaacccaagctgga 23987 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaa 283 ||||||||||||||||||||||| ||||| || ||||| Sbjct: 23986 aaaggacacctccgtcgccgaccggctcgctcgtatgaa 23948 Score = 67.9 bits (34), Expect = 7e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 372 caaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggagaaaatg 429 |||||||| |||||||| ||||||||||| |||||||| |||||||||| ||||||| Sbjct: 22693 caaattggtaacacattctgcaaacttccaggtggacgcctgaagcctggtgaaaatg 22636 Score = 46.1 bits (23), Expect = 0.27 Identities = 41/47 (87%) Strand = Plus / Minus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctcc 571 |||||| | ||||||||||| ||| ||||||| || ||||||||||| Sbjct: 22120 tggtggcgtccaaactttgaaaccatgatgtacccgtattgccctcc 22074 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 676 tgtttgaactctatgacaatgttcag 701 |||| ||||||||||||||||||||| Sbjct: 21886 tgttcgaactctatgacaatgttcag 21861
>gb|AC189309.1| Brassica rapa subsp. pekinensis clone KBrB034C07, complete sequence Length = 109282 Score = 69.9 bits (35), Expect = 2e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataaccaag 584 |||||| | ||||||||||||||| ||||||| || ||||||||||| || ||||| ||| Sbjct: 70876 tggtggcgtccaaactttgagaccatgatgtacccatattgccctcctcacataactaag 70935 Query: 585 cccaagg 591 ||||||| Sbjct: 70936 cccaagg 70942 Score = 67.9 bits (34), Expect = 7e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 370 tgcaaattggaaacacattttgcaaacttcctggtggacgtttgaagcctggagaaaa 427 |||||||||| |||||||| ||||| ||||| |||||||| |||||||||||||||| Sbjct: 70305 tgcaaattggtaacacattctgcaagcttccaggtggacgcctgaagcctggagaaaa 70362 Score = 61.9 bits (31), Expect = 5e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 185 ggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgga 244 |||||||||| ||||||||| | ||||||| ||||| || || || || ||| |||| Sbjct: 69136 ggtggtgaacacgtacccgctttcgaactacagcttcggaactaaagaaccgaagctgga 69195 Query: 245 gaaggacacctccgtcgccgaccgcctcgcccgcatgaa 283 ||||||||||||||||||||||| ||||| || ||||| Sbjct: 69196 aaaggacacctccgtcgccgaccgtctcgctcgtatgaa 69234
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 184 cggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgg 243 |||||||||||||| |||||||||||| | || | ||| |||||||||||||||||||| Sbjct: 1207919 cggtggtgaacgtgcacccgctcgccagccgcatggtcgacaccaaggagcccaagatgg 1207978 Query: 244 ag 245 || Sbjct: 1207979 ag 1207980
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 184 cggtggtgaacgtgtacccgctcgccaactacacgttcggcaccaaggagcccaagatgg 243 |||||||||||||| |||||||||||| | || | ||| |||||||||||||||||||| Sbjct: 59872 cggtggtgaacgtgcacccgctcgccagccgcatggtcgacaccaaggagcccaagatgg 59931 Query: 244 ag 245 || Sbjct: 59932 ag 59933
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 61.9 bits (31), Expect = 5e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 339 caagagcacaatcacccccacatactgttattgcaaattggaaacacattttgcaaactt 398 |||||||| || ||||| ||||||||| | |||||| |||| ||||||||||||||| Sbjct: 19571 caagagcagaaccaccctcacatactgctcctgcaaaccagaaatacattttgcaaactt 19630 Query: 399 cctggtggacgtttgaagcctggagaaaatg 429 ||||||| ||| ||||| ||| |||||||| Sbjct: 19631 cctggtgcacggttgaaacctaaagaaaatg 19661
>emb|CR680824.2|CNS0FO9W Tetraodon nigroviridis full-length cDNA Length = 1228 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 198 tacccgctcgccaactacacgttcggcaccaaggagcc 235 ||||||||| |||||||||| || |||||||||||||| Sbjct: 303 tacccgctcaccaactacacatttggcaccaaggagcc 340
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 50.1 bits (25), Expect = 0.017 Identities = 31/33 (93%) Strand = Plus / Minus Query: 247 aggacacctccgtcgccgaccgcctcgcccgca 279 |||||||||||||| ||||| |||||||||||| Sbjct: 28431640 aggacacctccgtcaccgacagcctcgcccgca 28431608
>dbj|AP006848.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, fosmid clone:OSJNOa199K18 Length = 39582 Score = 50.1 bits (25), Expect = 0.017 Identities = 31/33 (93%) Strand = Plus / Minus Query: 247 aggacacctccgtcgccgaccgcctcgcccgca 279 |||||||||||||| ||||| |||||||||||| Sbjct: 36442 aggacacctccgtcaccgacagcctcgcccgca 36410
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.068 Identities = 30/32 (93%) Strand = Plus / Minus Query: 248 ggacacctccgtcgccgaccgcctcgcccgca 279 ||||||||||||| ||||| |||||||||||| Sbjct: 22281471 ggacacctccgtcaccgacagcctcgcccgca 22281440
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 48.1 bits (24), Expect = 0.068 Identities = 30/32 (93%) Strand = Plus / Minus Query: 248 ggacacctccgtcgccgaccgcctcgcccgca 279 ||||||||||||| ||||| |||||||||||| Sbjct: 98714 ggacacctccgtcaccgacagcctcgcccgca 98683
>ref|NM_001063177.1| Oryza sativa (japonica cultivar-group) Os06g0122800 (Os06g0122800) mRNA, complete cds Length = 501 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Minus Query: 184 cggtggtgaacgtgtacccgctcgcca 210 |||||||||||||| |||||||||||| Sbjct: 34 cggtggtgaacgtgcacccgctcgcca 8
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 46.1 bits (23), Expect = 0.27 Identities = 38/43 (88%) Strand = Plus / Plus Query: 186 gtggtgaacgtgtacccgctcgccaactacacgttcggcacca 228 |||||||||||| ||||||| |||| | ||||| ||||||||| Sbjct: 135189 gtggtgaacgtgcacccgcttgccagccacacggtcggcacca 135231
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.27 Identities = 38/43 (88%) Strand = Plus / Plus Query: 186 gtggtgaacgtgtacccgctcgccaactacacgttcggcacca 228 |||||||||||| ||||||| |||| | ||||| ||||||||| Sbjct: 11913908 gtggtgaacgtgcacccgcttgccagccacacggtcggcacca 11913950
>ref|NM_001043132.1| Drosophila melanogaster CG3689-RC, transcript variant C (CG3689), mRNA Length = 1154 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 210 aactacacgttcggcaccaaggagcc 235 |||||||| ||||||||||||||||| Sbjct: 377 aactacacattcggcaccaaggagcc 402
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 210 aactacacgttcggcaccaaggagcc 235 |||||||| ||||||||||||||||| Sbjct: 9404592 aactacacattcggcaccaaggagcc 9404617
>emb|AM293417.1| Uncultured bacterium partial amoaA gene for ammonia monooxygenase, clone GZKN16 Length = 449 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 aagaaagctgtgcagcaaactt 467 |||||||||||||||||||||| Sbjct: 391 aagaaagctgtgcagcaaactt 370
>ref|NM_140051.2| Drosophila melanogaster CG3689-RB, transcript variant B (CG3689), mRNA Length = 2202 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 210 aactacacgttcggcaccaaggagcc 235 |||||||| ||||||||||||||||| Sbjct: 377 aactacacattcggcaccaaggagcc 402
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 210 aactacacgttcggcaccaaggagcc 235 |||||||| ||||||||||||||||| Sbjct: 110616 aactacacattcggcaccaaggagcc 110641
>gb|AY069791.1| Drosophila melanogaster SD03330 full length cDNA Length = 2256 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 210 aactacacgttcggcaccaaggagcc 235 |||||||| ||||||||||||||||| Sbjct: 377 aactacacattcggcaccaaggagcc 402
>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a peroxisomal biogenesis factor 12 (PEX12) pseudogene, complete sequence Length = 136943 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 837 caaactggctaattagtagcat 858 |||||||||||||||||||||| Sbjct: 88506 caaactggctaattagtagcat 88527
>dbj|AK231895.1| Sus scrofa mRNA, clone:LNG010043D11, expressed in lung Length = 1129 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 672 ccactgtttgaactctatgacaatg 696 |||||||||||||| |||||||||| Sbjct: 752 ccactgtttgaactgtatgacaatg 776
>emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on chromosome 16, complete sequence Length = 136128 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 ctccacatataaccaagccca 588 ||||||||||||||||||||| Sbjct: 46471 ctccacatataaccaagccca 46451
>ref|NM_119128.2| Arabidopsis thaliana unknown protein (AT4G29820) mRNA, complete cds Length = 1200 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 585 tggtggagacccaactttgagacattgatgtatcctt 621
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1054 tgatttacatgatgatctgct 1074 ||||||||||||||||||||| Sbjct: 27491 tgatttacatgatgatctgct 27511
>gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete sequence Length = 108232 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 aagcttttcattgttcatcta 620 ||||||||||||||||||||| Sbjct: 13402 aagcttttcattgttcatcta 13382
>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence Length = 120487 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 734 gcagctgtctaggttccagttcaac 758 |||||||||||||||| |||||||| Sbjct: 41057 gcagctgtctaggttcaagttcaac 41081
>gb|AC117656.13| Mus musculus chromosome 14, clone RP23-298L3, complete sequence Length = 228361 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 847 aattagtagcatgacatgttt 867 ||||||||||||||||||||| Sbjct: 121463 aattagtagcatgacatgttt 121443
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 734 gcagctgtctaggttccagttcaac 758 |||||||||||||||| |||||||| Sbjct: 154664 gcagctgtctaggttcaagttcaac 154688
>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence Length = 209523 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 accaaggagcccaagatggag 245 ||||||||||||||||||||| Sbjct: 27686 accaaggagcccaagatggag 27666
>emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, complete sequence Length = 27428 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 865 ttttctcagtaaccatgtttc 885 ||||||||||||||||||||| Sbjct: 15800 ttttctcagtaaccatgtttc 15820
>gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map CIC06C07, complete sequence Length = 95375 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 tcaactacatgaaagaaggaa 306 ||||||||||||||||||||| Sbjct: 61478 tcaactacatgaaagaaggaa 61498
>gb|AY091704.1| Arabidopsis thaliana AT4g29820/F27B13_60 mRNA, complete cds Length = 669 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 421 tggtggagacccaactttgagacattgatgtatcctt 457
>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3' end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B, two novel genes, the 5' end of the HARS2 gene for histidyl-tRNA synthetase 2, a pseudogene similar to part of homeobox proteins and two CpG islands, complete sequence Length = 149933 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 aagcctggagaaaatgaaatt 434 ||||||||||||||||||||| Sbjct: 61990 aagcctggagaaaatgaaatt 61970
>gb|AC155160.4| Mus musculus BAC clone RP24-510B6 from chromosome 17, complete sequence Length = 208376 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 accaaggagcccaagatggag 245 ||||||||||||||||||||| Sbjct: 157119 accaaggagcccaagatggag 157139
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 ctccgtcgccgaccgcctcgcccgc 278 ||||||||||| ||||||||||||| Sbjct: 1114301 ctccgtcgccgcccgcctcgcccgc 1114325
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 tccgtcgccgaccgcctcgcc 275 ||||||||||||||||||||| Sbjct: 7310017 tccgtcgccgaccgcctcgcc 7310037
>gb|AY085984.1| Arabidopsis thaliana clone 20435 mRNA, complete sequence Length = 1166 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 585 tggtggagacccaactttgagacattgatgtatcctt 621
>gb|AY048229.1| Arabidopsis thaliana AT4g29820/F27B13_60 mRNA, complete cds Length = 1193 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 583 tggtggagacccaactttgagacattgatgtatcctt 619
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 gtatttcgctgttccaaggaa 652 ||||||||||||||||||||| Sbjct: 13151 gtatttcgctgttccaaggaa 13131
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 131179 tggtggagacccaactttgagacattgatgtatcctt 131143
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 21106 tggtggagacccaactttgagacattgatgtatcctt 21070
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 gacgtcgtcggtggtgaacgtgtac 200 ||||||||||||||||| ||||||| Sbjct: 64105 gacgtcgtcggtggtgagcgtgtac 64081
>dbj|AK174904.1| Ciona intestinalis cDNA, clone:citb040e22, full insert sequence Length = 1072 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgag 545 ||||||||||||||||||||| Sbjct: 511 tggtggaggccaaactttgag 531
>emb|BX827278.1|CNS0A3PZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1223 Score = 42.1 bits (21), Expect = 4.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgagaccgtgatgtatcctt 561 |||||||| || ||||||||||| |||||||||||| Sbjct: 676 tggtggagacccaactttgagacattgatgtatcctt 712
>ref|NM_211277.1| Eremothecium gossypii AFR375Wp (AFR375W), mRNA Length = 570 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 ctccgtcgccgaccgcctcgcccgc 278 ||||||||||| ||||||||||||| Sbjct: 429 ctccgtcgccgcccgcctcgcccgc 453
>dbj|AB086821.1| Homo sapiens gene for galectin 3, exon 3, partial cds Length = 497 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 gtcaactacatgaaagaaggaatgc 309 ||||| ||||||||||||||||||| Sbjct: 460 gtcaagtacatgaaagaaggaatgc 436
>dbj|AK112574.1| Ciona intestinalis cDNA, clone:cicl058b07, full insert sequence Length = 1493 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 tggtggaggccaaactttgag 545 ||||||||||||||||||||| Sbjct: 772 tggtggaggccaaactttgag 792
>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192440 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gtcaactacatgaaagaaggaatgc 309 ||||| ||||||||||||||||||| Sbjct: 87965 gtcaagtacatgaaagaaggaatgc 87989
>emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chromosome 4, complete sequence Length = 203623 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aagcccaaggaatgcaagaag 602 ||||||||||||||||||||| Sbjct: 79298 aagcccaaggaatgcaagaag 79318
>gb|AF031422.1|HSLGALS3S2 Homo sapiens galectin 3 (LGALS3) gene, exons 2 and 3 Length = 1131 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 gtcaactacatgaaagaaggaatgc 309 ||||| ||||||||||||||||||| Sbjct: 1072 gtcaagtacatgaaagaaggaatgc 1048
>dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-31L22, complete sequences Length = 190102 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 ggacgtttgaagcctggagaa 425 ||||||||||||||||||||| Sbjct: 3955 ggacgtttgaagcctggagaa 3935
>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete sequences Length = 98501 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 ggacgtttgaagcctggagaa 425 ||||||||||||||||||||| Sbjct: 94066 ggacgtttgaagcctggagaa 94046 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 174,465,017 Number of extensions: 9819916 Number of successful extensions: 188451 Number of sequences better than 10.0: 73 Number of HSP's gapped: 188446 Number of HSP's successfully gapped: 115 Length of query: 1108 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1085 Effective length of database: 18,503,978,556 Effective search space: 20076816733260 Effective search space used: 20076816733260 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
