ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf91h22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107801.1| Zea mays PCO105307 mRNA sequence 305 2e-79
2ref|NM_001069294.1| Oryza sativa (japonica cultivar-group) Os09g... 246 1e-61
3dbj|AK067071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 1e-61
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-31
5dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-31
6dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-31
7gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 52 0.004
8gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, co... 52 0.004
9emb|CR855226.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 1.0
10emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 44 1.0
11gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, co... 44 1.0
12gb|AC110003.2| Homo sapiens chromosome 5 clone RP11-166A12, comp... 44 1.0
13dbj|AK036631.1| Mus musculus adult male bone cDNA, RIKEN full-le... 44 1.0
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.0
15emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 44 1.0
16emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 44 1.0
17ref|XM_001024630.1| Tetrahymena thermophila SB210 Type III restr... 42 4.1
18ref|XM_001022379.1| Tetrahymena thermophila SB210 hypothetical p... 42 4.1
19dbj|AK243465.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 42 4.1
20ref|XM_001177660.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 4.1
21ref|XM_001195654.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 4.1
22ref|XM_774861.2| PREDICTED: Strongylocentrotus purpuratus simila... 42 4.1
23ref|XM_788333.2| PREDICTED: Strongylocentrotus purpuratus simila... 42 4.1
24ref|NM_001056552.1| Oryza sativa (japonica cultivar-group) Os03g... 42 4.1
25ref|NM_130342.2| Arabidopsis thaliana unknown protein (AT2G47750... 42 4.1
26gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 4.1
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 4.1
28gb|AF461896.1| Homo sapiens FP15256 mRNA, complete cds 42 4.1
29gb|AE014310.1| Homo sapiens chromosome 13q34 schizophrenia regio... 42 4.1
30gb|BT000629.1| Arabidopsis thaliana putative auxin-responsive pr... 42 4.1
31gb|AC084398.25| Homo sapiens 12 BAC RP11-512N21 (Roswell Park Ca... 42 4.1
32gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 ma... 42 4.1
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
34emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on ch... 42 4.1
35gb|AY054288.1| Arabidopsis thaliana At2g47750/F17A22.14 mRNA, co... 42 4.1
36emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 4.1
37emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 42 4.1
38emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, B... 42 4.1
39emb|BX005343.18| Zebrafish DNA sequence from clone DKEY-29F2 in ... 42 4.1
40gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds 42 4.1
41gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 4.1
42emb|BX005135.5| Zebrafish DNA sequence from clone CH211-89P16 in... 42 4.1
43gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 4.1
44gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Canc... 42 4.1
45emb|AL157764.12| Human DNA sequence from clone RP11-562E17 on ch... 42 4.1
46gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome ... 42 4.1 
>gb|AY107801.1| Zea mays PCO105307 mRNA sequence
          Length = 1115
 Score =  305 bits (154), Expect = 2e-79
 Identities = 412/498 (82%)
 Strand = Plus / Plus

                                                                       
Query: 220 ggaggtgagcttcgtggacggcgacgaagcgaagcggctggtggcggaggaggggtacac 279
           |||||||||||||||||||| |||||| |||||| |||| ||||  |||||||| |||||
Sbjct: 235 ggaggtgagcttcgtggacgccgacgaggcgaagaggctcgtgggcgaggagggctacac 294

                                                                       
Query: 280 ggtgctggacgtccgggaccggcggcagtacgagagggcgcacgtcagggcctccgccca 339
           |||||||||| || ||||| ||  ||||  ||||||||| ||| ||| | ||||| | ||
Sbjct: 295 ggtgctggacatcagggacagggcgcagcgcgagagggcacacatcaagtcctccacaca 354

                                                                       
Query: 340 cgtcccgctctacatcgagaacgaggacaacgacattggaacgatcatcaagcggcaagc 399
           ||| || |||| ||| |||||| | |||||||||||||| || ||| | ||||| ||   
Sbjct: 355 cgtgcctctcttcattgagaaccaagacaacgacattgggaccatcgtgaagcgccagct 414

                                                                       
Query: 400 gcacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggactt 459
           ||||||||||||||| || ||||||| ||| ||| |||||||||||||||||| ||||||
Sbjct: 415 gcacaacaacttcgcggggctcttcttcgggctgcccttcaccaagctcaacccggactt 474

                                                                       
Query: 460 caccaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgccagga 519
           | ||  ||| || | |  ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 475 cgccctgacagtcaaggacaagttctcgccggaaagcaagctgctggttgtctgccagga 534

                                                                       
Query: 520 aggcctcaggtccacagcggctgcagatgcattggagcgagagggcttccagaacctggc 579
           ||| ||||||||  |||| |||||||||||| |||||  ||| |||||||| ||  | ||
Sbjct: 535 aggtctcaggtcagcagctgctgcagatgcactggagaaagaaggcttccaaaatattgc 594

                                                                       
Query: 580 ctgcatcacctcgggtcttcagacattgaaaccaggaacgttcgagaccgtcggcgaagc 639
            |||||||| || |||||||| ||| |||| ||||||||||| ||  | || ||  ||  
Sbjct: 595 atgcatcacatcaggtcttcaaacagtgaagccaggaacgtttgaatctgtggggaaaag 654

                                                                       
Query: 640 cgagctgcagaatgcggggaaagccggccttgtgaccatccaggggaagatctccatagt 699
            ||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||  ||||
Sbjct: 655 tgagctgcagaacgcggggaaagctggccttgtgaccatccaagggaagatttctgtagt 714

                             
Query: 700 tcttgggactgtcttgat 717
            ||||||||||| |||||
Sbjct: 715 ccttgggactgtattgat 732
to top
>ref|NM_001069294.1| Oryza sativa (japonica cultivar-group) Os09g0279400 (Os09g0279400)
           mRNA, complete cds
          Length = 1154

 Score =  246 bits (124), Expect = 1e-61
 Identities = 466/580 (80%)
 Strand = Plus / Plus

                                                                       
Query: 221 gaggtgagcttcgtggacggcgacgaagcgaagcggctggtggcggaggaggggtacacg 280
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 269 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 328

                                                                       
Query: 281 gtgctggacgtccgggaccggcggcagtacgagagggcgcacgtcagggcctccgcccac 340
           ||||||||| |||||||||||  ||||  ||||||||||||| ||| |  ||| || || 
Sbjct: 329 gtgctggacatccgggaccggacgcagcgcgagagggcgcacatcaagaactcagcgcat 388

                                                                       
Query: 341 gtcccgctctacatcgagaacgaggacaacgacattggaacgatcatcaagcggcaagcg 400
           || || |||| | |||||||||| |||  |||||||||||| || || |||||    |  
Sbjct: 389 gtgcccctcttcgtcgagaacgacgacggcgacattggaactattataaagcgcacggta 448

                                                                       
Query: 401 cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 460
           |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 449 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 508

                                                                       
Query: 461 accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgccaggaa 520
           ||||||| ||| | |   ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 509 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaa 568

                                                                       
Query: 521 ggcctcaggtccacagcggctgcagatgcattggagcgagagggcttccagaacctggcc 580
           || ||||||||||| |  ||||| |||| ||||||| |||| |||||||| || ||||| 
Sbjct: 569 gggctcaggtccacgggagctgctgatgtattggagagagaaggcttccaaaatctggca 628

                                                                       
Query: 581 tgcatcacctcgggtcttcagacattgaaaccaggaacgttcgagaccgtcggcgaagcc 640
           |||||||  || || ||||||||| |||| |||||||| || ||  | || ||| ||   
Sbjct: 629 tgcatcaaatcagggcttcagacactgaagccaggaacatttgaatctgttggcaaaagt 688

                                                                       
Query: 641 gagctgcagaatgcggggaaagccggccttgtgaccatccaggggaagatctccatagtt 700
           |||||||| || || |||||||| || ||||||||  | || |||||||| |||   |||
Sbjct: 689 gagctgcaaaacgcagggaaagcaggacttgtgacggtgcaagggaagatttccgctgtt 748

                                                                       
Query: 701 cttgggactgtcttgataactttgttgttgctcataacagtgttcccggaccaggctgag 760
           ||||| ||||| ||||||| |   |   |  |||| ||| ||||||| ||||||||||| 
Sbjct: 749 cttggaactgtgttgataagtgcctaccttttcatcacattgttccctgaccaggctgaa 808

                                                   
Query: 761 cagatcttcgagttggctggcatcaaattgtgattagaat 800
            || | || || |||||||| ||||||||||||| |||||
Sbjct: 809 aagctttttgacttggctggaatcaaattgtgatcagaat 848



 Score =  109 bits (55), Expect = 2e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 75  aaatggcagttcttggtctatctactgccttctctcccccaagaggttcttggatagctg 134
           |||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||
Sbjct: 120 aaatggcagttcttggtctatccactgccttctctcctcccagaggttcttgtatagctg 179

                              
Query: 135 tgaggctcaggaatggcgc 153
           ||||| ||||| |||||||
Sbjct: 180 tgaggatcaggcatggcgc 198
to top
>dbj|AK067071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I09, full
           insert sequence
          Length = 1156

 Score =  246 bits (124), Expect = 1e-61
 Identities = 466/580 (80%)
 Strand = Plus / Plus

                                                                       
Query: 221 gaggtgagcttcgtggacggcgacgaagcgaagcggctggtggcggaggaggggtacacg 280
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 271 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 330

                                                                       
Query: 281 gtgctggacgtccgggaccggcggcagtacgagagggcgcacgtcagggcctccgcccac 340
           ||||||||| |||||||||||  ||||  ||||||||||||| ||| |  ||| || || 
Sbjct: 331 gtgctggacatccgggaccggacgcagcgcgagagggcgcacatcaagaactcagcgcat 390

                                                                       
Query: 341 gtcccgctctacatcgagaacgaggacaacgacattggaacgatcatcaagcggcaagcg 400
           || || |||| | |||||||||| |||  |||||||||||| || || |||||    |  
Sbjct: 391 gtgcccctcttcgtcgagaacgacgacggcgacattggaactattataaagcgcacggta 450

                                                                       
Query: 401 cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 460
           |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 451 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 510

                                                                       
Query: 461 accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgccaggaa 520
           ||||||| ||| | |   ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 511 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaa 570

                                                                       
Query: 521 ggcctcaggtccacagcggctgcagatgcattggagcgagagggcttccagaacctggcc 580
           || ||||||||||| |  ||||| |||| ||||||| |||| |||||||| || ||||| 
Sbjct: 571 gggctcaggtccacgggagctgctgatgtattggagagagaaggcttccaaaatctggca 630

                                                                       
Query: 581 tgcatcacctcgggtcttcagacattgaaaccaggaacgttcgagaccgtcggcgaagcc 640
           |||||||  || || ||||||||| |||| |||||||| || ||  | || ||| ||   
Sbjct: 631 tgcatcaaatcagggcttcagacactgaagccaggaacatttgaatctgttggcaaaagt 690

                                                                       
Query: 641 gagctgcagaatgcggggaaagccggccttgtgaccatccaggggaagatctccatagtt 700
           |||||||| || || |||||||| || ||||||||  | || |||||||| |||   |||
Sbjct: 691 gagctgcaaaacgcagggaaagcaggacttgtgacggtgcaagggaagatttccgctgtt 750

                                                                       
Query: 701 cttgggactgtcttgataactttgttgttgctcataacagtgttcccggaccaggctgag 760
           ||||| ||||| ||||||| |   |   |  |||| ||| ||||||| ||||||||||| 
Sbjct: 751 cttggaactgtgttgataagtgcctaccttttcatcacattgttccctgaccaggctgaa 810

                                                   
Query: 761 cagatcttcgagttggctggcatcaaattgtgattagaat 800
            || | || || |||||||| ||||||||||||| |||||
Sbjct: 811 aagctttttgacttggctggaatcaaattgtgatcagaat 850



 Score =  109 bits (55), Expect = 2e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 75  aaatggcagttcttggtctatctactgccttctctcccccaagaggttcttggatagctg 134
           |||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||
Sbjct: 122 aaatggcagttcttggtctatccactgccttctctcctcccagaggttcttgtatagctg 181

                              
Query: 135 tgaggctcaggaatggcgc 153
           ||||| ||||| |||||||
Sbjct: 182 tgaggatcaggcatggcgc 200
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  147 bits (74), Expect = 1e-31
 Identities = 95/102 (93%)
 Strand = Plus / Plus

                                                                           
Query: 221     gaggtgagcttcgtggacggcgacgaagcgaagcggctggtggcggaggaggggtacacg 280
               |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5812739 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 5812798

                                                         
Query: 281     gtgctggacgtccgggaccggcggcagtacgagagggcgcac 322
               ||||||||| |||||||||||  ||||  |||||||||||||
Sbjct: 5812799 gtgctggacatccgggaccggacgcagcgcgagagggcgcac 5812840



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 107/130 (82%)
 Strand = Plus / Plus

                                                                           
Query: 401     cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 460
               |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 5814087 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 5814146

                                                                           
Query: 461     accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgccaggaa 520
               ||||||| ||| | |   ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 5814147 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaa 5814206

                         
Query: 521     ggcctcaggt 530
               || |||||||
Sbjct: 5814207 gggctcaggt 5814216



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                    
Query: 75      aaatggcagttcttggtctatctactgccttctctcc 111
               |||||||||||||||||||||| ||||||||||||||
Sbjct: 5812426 aaatggcagttcttggtctatccactgccttctctcc 5812462



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 116     agaggttcttggatagctgtgaggctcaggaatggcgc 153
               ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 5812631 agaggttcttgtatagctgtgaggatcaggcatggcgc 5812668



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                           
Query: 732     tcataacagtgttcccggaccaggctgagcagatcttcgagttggctggcatcaaattgt 791
               |||| ||| ||||||| |||||||||||  || | || || |||||||| ||||||||||
Sbjct: 5815378 tcatcacattgttccctgaccaggctgaaaagctttttgacttggctggaatcaaattgt 5815437

                        
Query: 792     gattagaat 800
               ||| |||||
Sbjct: 5815438 gatcagaat 5815446
to top
>dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0651G05
          Length = 153258

 Score =  147 bits (74), Expect = 1e-31
 Identities = 95/102 (93%)
 Strand = Plus / Plus

                                                                        
Query: 221  gaggtgagcttcgtggacggcgacgaagcgaagcggctggtggcggaggaggggtacacg 280
            |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4226 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 4285

                                                      
Query: 281  gtgctggacgtccgggaccggcggcagtacgagagggcgcac 322
            ||||||||| |||||||||||  ||||  |||||||||||||
Sbjct: 4286 gtgctggacatccgggaccggacgcagcgcgagagggcgcac 4327



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 107/130 (82%)
 Strand = Plus / Plus

                                                                        
Query: 401  cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 460
            |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 5574 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 5633

                                                                        
Query: 461  accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgccaggaa 520
            ||||||| ||| | |   ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 5634 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaa 5693

                      
Query: 521  ggcctcaggt 530
            || |||||||
Sbjct: 5694 gggctcaggt 5703



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                 
Query: 75   aaatggcagttcttggtctatctactgccttctctcc 111
            |||||||||||||||||||||| ||||||||||||||
Sbjct: 3913 aaatggcagttcttggtctatccactgccttctctcc 3949



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 116  agaggttcttggatagctgtgaggctcaggaatggcgc 153
            ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 4118 agaggttcttgtatagctgtgaggatcaggcatggcgc 4155



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                        
Query: 732  tcataacagtgttcccggaccaggctgagcagatcttcgagttggctggcatcaaattgt 791
            |||| ||| ||||||| |||||||||||  || | || || |||||||| ||||||||||
Sbjct: 6865 tcatcacattgttccctgaccaggctgaaaagctttttgacttggctggaatcaaattgt 6924

                     
Query: 792  gattagaat 800
            ||| |||||
Sbjct: 6925 gatcagaat 6933
to top
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0701E06
          Length = 123415

 Score =  147 bits (74), Expect = 1e-31
 Identities = 95/102 (93%)
 Strand = Plus / Plus

                                                                          
Query: 221    gaggtgagcttcgtggacggcgacgaagcgaagcggctggtggcggaggaggggtacacg 280
              |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 108944 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 109003

                                                        
Query: 281    gtgctggacgtccgggaccggcggcagtacgagagggcgcac 322
              ||||||||| |||||||||||  ||||  |||||||||||||
Sbjct: 109004 gtgctggacatccgggaccggacgcagcgcgagagggcgcac 109045



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 107/130 (82%)
 Strand = Plus / Plus

                                                                          
Query: 401    cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 460
              |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 110292 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 110351

                                                                          
Query: 461    accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgccaggaa 520
              ||||||| ||| | |   ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 110352 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaa 110411

                        
Query: 521    ggcctcaggt 530
              || |||||||
Sbjct: 110412 gggctcaggt 110421



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                   
Query: 75     aaatggcagttcttggtctatctactgccttctctcc 111
              |||||||||||||||||||||| ||||||||||||||
Sbjct: 108631 aaatggcagttcttggtctatccactgccttctctcc 108667



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 116    agaggttcttggatagctgtgaggctcaggaatggcgc 153
              ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 108836 agaggttcttgtatagctgtgaggatcaggcatggcgc 108873



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                          
Query: 732    tcataacagtgttcccggaccaggctgagcagatcttcgagttggctggcatcaaattgt 791
              |||| ||| ||||||| |||||||||||  || | || || |||||||| ||||||||||
Sbjct: 111583 tcatcacattgttccctgaccaggctgaaaagctttttgacttggctggaatcaaattgt 111642

                       
Query: 792    gattagaat 800
              ||| |||||
Sbjct: 111643 gatcagaat 111651
to top
>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 48    aaaagagcagagagaatcaagaagca 73
             ||||||||||||||||||||||||||
Sbjct: 46448 aaaagagcagagagaatcaagaagca 46473
to top
>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence
          Length = 192545

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 48    aaaagagcagagagaatcaagaagca 73
             ||||||||||||||||||||||||||
Sbjct: 11977 aaaagagcagagagaatcaagaagca 12002
to top
>emb|CR855226.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0616E02-H0507E05,
             complete sequence
          Length = 110274

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 253   gcggctggtggcggaggagggg 274
             ||||||||||||||||||||||
Sbjct: 63439 gcggctggtggcggaggagggg 63418
to top
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 627     ccgtcggcgaagccgagctgca 648
               ||||||||||||||||||||||
Sbjct: 4654494 ccgtcggcgaagccgagctgca 4654515
to top
>gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, complete sequence
          Length = 180965

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 860    agtaggtgtacttggtgggata 881
              ||||||||||||||||||||||
Sbjct: 104503 agtaggtgtacttggtgggata 104524
to top
>gb|AC110003.2| Homo sapiens chromosome 5 clone RP11-166A12, complete sequence
          Length = 89858

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 703   tgggactgtcttgataactttgttgttgctcataacag 740
             ||||||||||||||||| |||  ||||||| |||||||
Sbjct: 26353 tgggactgtcttgataaatttcctgttgcttataacag 26390
to top
>dbj|AK036631.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830143O18 product:RIO kinase 3 (yeast),
            full insert sequence
          Length = 3817

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 860  agtaggtgtacttggtgggata 881
            ||||||||||||||||||||||
Sbjct: 1460 agtaggtgtacttggtgggata 1481
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 253    gcggctggtggcggaggagggg 274
              ||||||||||||||||||||||
Sbjct: 401313 gcggctggtggcggaggagggg 401292
to top
>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 253   gcggctggtggcggaggagggg 274
             ||||||||||||||||||||||
Sbjct: 85972 gcggctggtggcggaggagggg 85951
to top
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 253   gcggctggtggcggaggagggg 274
             ||||||||||||||||||||||
Sbjct: 40065 gcggctggtggcggaggagggg 40044
to top
>ref|XM_001024630.1| Tetrahymena thermophila SB210 Type III restriction enzyme, res
            subunit family protein (TTHERM_00302060) mRNA, complete
            cds
          Length = 6840

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1038 caagtaaaaagaagaattgtg 1058
            |||||||||||||||||||||
Sbjct: 6594 caagtaaaaagaagaattgtg 6614
to top
>ref|XM_001022379.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00558150)
            mRNA, complete cds
          Length = 1938

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1035 tttcaagtaaaaagaagaatt 1055
            |||||||||||||||||||||
Sbjct: 1516 tttcaagtaaaaagaagaatt 1496
to top
>dbj|AK243465.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100071I16,
           full insert sequence
          Length = 1020

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 250 gaagcggctggtggcggaggaggggtaca 278
           |||||||||||||| ||||||||| ||||
Sbjct: 785 gaagcggctggtggaggaggagggctaca 813
to top
>ref|XM_001177660.1| PREDICTED: Strongylocentrotus purpuratus similar to EDRK rich factor
            (LOC574544), mRNA
          Length = 2221

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1010 agttctatcgataaattttgt 1030
            |||||||||||||||||||||
Sbjct: 623  agttctatcgataaattttgt 603
to top
>ref|XM_001195654.1| PREDICTED: Strongylocentrotus purpuratus similar to conserved
            hypothetical protein (LOC588660), mRNA
          Length = 7152

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 8    ttctttcttctccaggagaac 28
            |||||||||||||||||||||
Sbjct: 1233 ttctttcttctccaggagaac 1213
to top
>ref|XM_774861.2| PREDICTED: Strongylocentrotus purpuratus similar to EDRK rich factor
            (LOC574544), mRNA
          Length = 2221

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1010 agttctatcgataaattttgt 1030
            |||||||||||||||||||||
Sbjct: 623  agttctatcgataaattttgt 603
to top
>ref|XM_788333.2| PREDICTED: Strongylocentrotus purpuratus similar to conserved
            hypothetical protein (LOC588660), mRNA
          Length = 7152

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 8    ttctttcttctccaggagaac 28
            |||||||||||||||||||||
Sbjct: 1233 ttctttcttctccaggagaac 1213
to top
>ref|NM_001056552.1| Oryza sativa (japonica cultivar-group) Os03g0332500 (Os03g0332500)
           mRNA, complete cds
          Length = 1599

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 250 gaagcggctggtggcggaggaggggtaca 278
           |||||||||||||| ||||||||| ||||
Sbjct: 657 gaagcggctggtggaggaggagggctaca 685
to top
>ref|NM_130342.2| Arabidopsis thaliana unknown protein (AT2G47750) mRNA, complete cds
          Length = 2155

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 606  tgaaaccaggaacgttcgaga 626
            |||||||||||||||||||||
Sbjct: 1803 tgaaaccaggaacgttcgaga 1823
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 627     ccgtcggcgaagccgagctgc 647
               |||||||||||||||||||||
Sbjct: 2291565 ccgtcggcgaagccgagctgc 2291545
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 627     ccgtcggcgaagccgagctgc 647
               |||||||||||||||||||||
Sbjct: 1363997 ccgtcggcgaagccgagctgc 1363977
to top
>gb|AF461896.1| Homo sapiens FP15256 mRNA, complete cds
          Length = 2337

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 26  aacaaaaatttctgtaacaaa 46
           |||||||||||||||||||||
Sbjct: 249 aacaaaaatttctgtaacaaa 269
to top
>gb|AE014310.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 7 of
              11 of the complete sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 40     taacaaagaaaagagcagagagaat 64
              |||||| ||||||||||||||||||
Sbjct: 101937 taacaaggaaaagagcagagagaat 101961
to top
>gb|BT000629.1| Arabidopsis thaliana putative auxin-responsive protein
            (At2g47750/F17A22.14) mRNA, complete cds
          Length = 1758

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 606  tgaaaccaggaacgttcgaga 626
            |||||||||||||||||||||
Sbjct: 1586 tgaaaccaggaacgttcgaga 1606
to top
>gb|AC084398.25| Homo sapiens 12 BAC RP11-512N21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 45350

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    aacaaaaatttctgtaacaaa 46
             |||||||||||||||||||||
Sbjct: 30519 aacaaaaatttctgtaacaaa 30499
to top
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
             sequence
          Length = 106355

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 606   tgaaaccaggaacgttcgaga 626
             |||||||||||||||||||||
Sbjct: 27915 tgaaaccaggaacgttcgaga 27895
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 250      gaagcggctggtggcggaggaggggtaca 278
                |||||||||||||| ||||||||| ||||
Sbjct: 12241578 gaagcggctggtggaggaggagggctaca 12241550
to top
>emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on chromosome 10 Contains the
             PPP1R3C gene for protein phosphatase 1 regulatory
             (inhibitor) subunit 3C, a glyceraldehyde-3-phosphate
             dehydrogenase (GAPD) pseudogene and a CpG island, complete
             sequence
          Length = 173119

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    aaatttctgtaacaaagaaaa 51
             |||||||||||||||||||||
Sbjct: 77854 aaatttctgtaacaaagaaaa 77834
to top
>gb|AY054288.1| Arabidopsis thaliana At2g47750/F17A22.14 mRNA, complete cds
          Length = 2038

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 606  tgaaaccaggaacgttcgaga 626
            |||||||||||||||||||||
Sbjct: 1803 tgaaaccaggaacgttcgaga 1823
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 627     ccgtcggcgaagccgagctgc 647
               |||||||||||||||||||||
Sbjct: 1235919 ccgtcggcgaagccgagctgc 1235899
to top
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 962    ctcaagtaatttgtttttctc 982
              |||||||||||||||||||||
Sbjct: 112750 ctcaagtaatttgtttttctc 112730
to top
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project)
          Length = 95679

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 962   ctcaagtaatttgtttttctc 982
             |||||||||||||||||||||
Sbjct: 52040 ctcaagtaatttgtttttctc 52020
to top
>emb|BX005343.18| Zebrafish DNA sequence from clone DKEY-29F2 in linkage group 11,
             complete sequence
          Length = 235698

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 8     ttctttcttctccaggagaacaaaaattt 36
             ||||||||||||||| |||| ||||||||
Sbjct: 73234 ttctttcttctccagaagaagaaaaattt 73206
to top
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds
          Length = 2310

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 250 gaagcggctggtggcggaggaggggtaca 278
           |||||||||||||| ||||||||| ||||
Sbjct: 31  gaagcggctggtggaggaggagggctaca 59
to top
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 250   gaagcggctggtggcggaggaggggtaca 278
             |||||||||||||| ||||||||| ||||
Sbjct: 14348 gaagcggctggtggaggaggagggctaca 14320
to top
>emb|BX005135.5| Zebrafish DNA sequence from clone CH211-89P16 in linkage group 11,
             complete sequence
          Length = 166622

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 8     ttctttcttctccaggagaacaaaaattt 36
             ||||||||||||||| |||| ||||||||
Sbjct: 99032 ttctttcttctccagaagaagaaaaattt 99004
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 627     ccgtcggcgaagccgagctgc 647
               |||||||||||||||||||||
Sbjct: 1062671 ccgtcggcgaagccgagctgc 1062651
to top
>gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215547

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    aaaatttctgtaacaaagaaa 50
             |||||||||||||||||||||
Sbjct: 58277 aaaatttctgtaacaaagaaa 58297
to top
>emb|AL157764.12| Human DNA sequence from clone RP11-562E17 on chromosome 13, complete
             sequence
          Length = 137910

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 40    taacaaagaaaagagcagagagaat 64
             |||||| ||||||||||||||||||
Sbjct: 16436 taacaaggaaaagagcagagagaat 16460
to top
>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence
          Length = 193235

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    cccccaagaggttcttggata 130
              |||||||||||||||||||||
Sbjct: 118440 cccccaagaggttcttggata 118420


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 199,390,165
Number of extensions: 11173274
Number of successful extensions: 217583
Number of sequences better than 10.0: 46
Number of HSP's gapped: 217575
Number of HSP's successfully gapped: 66
Length of query: 1081
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1058
Effective length of database: 18,503,978,556
Effective search space: 19577209312248
Effective search space used: 19577209312248
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top