ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94h02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ019637.1| Triticum aestivum mRNA transport factor (Y14) mRNA, complete cds Length = 978 Score = 1489 bits (751), Expect = 0.0 Identities = 856/891 (96%) Strand = Plus / Plus Query: 88 aacaccggcggcggctgcagcgatggcggcggcggcgatgaacacggacgtggaggcggt 147 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 40 aacaccggcggcggctgcagcgatggcggcggcggcgatgagcacggacgtggaggcggt 99 Query: 148 cgacttcgactccgacgacgacgatctcatggacgaggagggcgccatcgaaccctcgcc 207 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 100 cgacttcgactccgacgacgacgatctcatggacgaggagggtgccatcgaaccctcgcc 159 Query: 208 ggcccccgctccccgcctccgatctaccatcgcagggggcggcggcggcgacgacgatgc 267 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 160 cgcccccgctccccgcctccgatctaccatcgcagggggcggcggcgacgacgacgatgc 219 Query: 268 cccgcgtaagactaaggggcgcggcttccgcgaggatcccaactcctcgtccgcgcaccg 327 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 220 cccgcgtaagactaaggggcgcggcttccgcgaggaccctaactcctcgtccgcgcaccg 279 Query: 328 cgactcgcggttagctggcgcaggccgctctggcttcgacgccctcgcctccgatggcgg 387 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 280 cgactcgcggttagctggcgcgggccgctctggcttcgacgccctcgcctccgatggcgg 339 Query: 388 ccctggacccgtgcgctccattgaagggtggattgtactggttactggagttcatgaaga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 ccctggacccgtgcgctccattgaagggtggattgtactggttactggagttcatgaaga 399 Query: 448 agctcaggaggaggacctccataatattttcggggattatgggcaggtcaagaacttgca 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 agctcaggaggaggacctccataatattttcggggattatgggcaggtcaagaacttgca 459 Query: 508 tttgaatttggatcgcaggactggatttgtgaagggatatgctctaattgagtatgagaa 567 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 tttgaatttggatcgccggactggatttgtgaagggatatgctctaattgagtatgagaa 519 Query: 568 ctttgagcaagcccagcgtgcaataagagaatcagacggaactgagcttctttcgcagat 627 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 ctttgagcaagccaagcgtgcaataagagaatcagacggaactgagcttctttcgcagat 579 Query: 628 aataagtgttgactgggcatttagtaatggccctgtcaaacagagaaatactcggaagag 687 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 580 aataagtgttgactgggcatttagtaatggccctgtcaaccagagaagtactcggaagag 639 Query: 688 atcaccgaggcctaatcgctcaaggagcccaccaaggagaagatacccttaggagcgacg 747 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 640 atcaccgaggcctaatcgctcaaggagcccaccaaggagaaggtacccttaagagcgacg 699 Query: 748 gaagtgcgagaatcatggggattcagttgtttgcttgtcctatcggaatttgacggccgc 807 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| || Sbjct: 700 gaagtgcgagaatcatgggctttcagttgtttgcttgtcttatcgtaatttgacggcggc 759 Query: 808 ccttgatttattgtaccagtttccggtagtagttgtatgatatcttcaaggtccctcctt 867 ||||| | ||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 760 ccttgtctctctgtaccaatttccggtagtagttgtatggcatcttcaaggtccttactt 819 Query: 868 tggtggatggacccgtgtttgctgttgaagtttggcttgccagtttgagacaattttagc 927 ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 820 tggtggatggagccatgtttgctcttgaagtttggcttgccagtttgagacaattgtagc 879 Query: 928 cgttgatgttggatccctgatgtgttggattggagtgtttgtgccacaatt 978 | |||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 880 ctttgatgttggatccgtgatgtgttggattggaatgtttgtgccacaatt 930
>dbj|AK243594.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100084C05, full insert sequence Length = 927 Score = 281 bits (142), Expect = 2e-72 Identities = 288/334 (86%), Gaps = 2/334 (0%) Strand = Plus / Plus Query: 361 cttcgacgccctcgcctccgatggcggccctggacccgtgcgctccattgaagggtggat 420 ||||||| |||||| |||||| || |||||||| ||||| || ||||||||||| ||||| Sbjct: 336 cttcgactccctcggctccgacggtggccctggccccgtccgatccattgaaggatggat 395 Query: 421 tgtactggttactggagttcatgaagaagctcaggaggaggacctccataatattttcgg 480 ||| || || ||||| |||||||||||||||||||| || || || || ||||||||| | Sbjct: 396 tgtgctagtcactggggttcatgaagaagctcaggaagatgatcttcacaatattttccg 455 Query: 481 ggattatgggcaggtcaagaacttgcatttgaatttggatcgcaggactggatttgtgaa 540 ||| | ||||||||||||||||||||||||||||||||||||| | |||||||| ||||| Sbjct: 456 ggactttgggcaggtcaagaacttgcatttgaatttggatcgccgaactggattcgtgaa 515 Query: 541 gggatatgctctaattgagtatgagaacttt-gagcaagcccagcgtgcaataagagaat 599 |||||||||||| ||||||||||| |||||| ||| |||| ||| |||||||| || || Sbjct: 516 gggatatgctcttattgagtatga-aactttcgaggaagctcaggctgcaataaaagcat 574 Query: 600 cagacggaactgagcttctttcgcagataataagtgttgactgggcatttagtaatggcc 659 || |||||||||||||| | || || ||||||||||| ||||||||||||||||||| Sbjct: 575 tggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatggcc 634 Query: 660 ctgtcaaacagagaaatactcggaagagatcacc 693 ||||||| | || |||| ||||||||||||||| Sbjct: 635 ctgtcaagcgcaggaatattcggaagagatcacc 668 Score = 101 bits (51), Expect = 5e-18 Identities = 104/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacgaggagggcgccatc 196 ||||||||||||||||||||| |||| |||||||| |||||||||||||| |||| | Sbjct: 115 gtggaggcggtcgacttcgaccccgatgacgacgacctcatggacgagga---cgccgcc 171 Query: 197 gaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcggcggc 256 || ||| ||||||| ||||| || |||||||| || |||||||| || |||||||||||| Sbjct: 172 gaccccacgccggcgcccgccccgcgcctccgctccaccatcgcgggcggcggcggcggc 231 Query: 257 g 257 | Sbjct: 232 g 232
>ref|NM_001061133.1| Oryza sativa (japonica cultivar-group) Os05g0140500 (Os05g0140500) mRNA, complete cds Length = 615 Score = 281 bits (142), Expect = 2e-72 Identities = 288/334 (86%), Gaps = 2/334 (0%) Strand = Plus / Plus Query: 361 cttcgacgccctcgcctccgatggcggccctggacccgtgcgctccattgaagggtggat 420 ||||||| |||||| |||||| || |||||||| ||||| || ||||||||||| ||||| Sbjct: 246 cttcgactccctcggctccgacggtggccctggccccgtccgatccattgaaggatggat 305 Query: 421 tgtactggttactggagttcatgaagaagctcaggaggaggacctccataatattttcgg 480 ||| || || ||||| |||||||||||||||||||| || || || || ||||||||| | Sbjct: 306 tgtgctagtcactggggttcatgaagaagctcaggaagatgatcttcacaatattttccg 365 Query: 481 ggattatgggcaggtcaagaacttgcatttgaatttggatcgcaggactggatttgtgaa 540 ||| | ||||||||||||||||||||||||||||||||||||| | |||||||| ||||| Sbjct: 366 ggactttgggcaggtcaagaacttgcatttgaatttggatcgccgaactggattcgtgaa 425 Query: 541 gggatatgctctaattgagtatgagaacttt-gagcaagcccagcgtgcaataagagaat 599 |||||||||||| ||||||||||| |||||| ||| |||| ||| |||||||| || || Sbjct: 426 gggatatgctcttattgagtatga-aactttcgaggaagctcaggctgcaataaaagcat 484 Query: 600 cagacggaactgagcttctttcgcagataataagtgttgactgggcatttagtaatggcc 659 || |||||||||||||| | || || ||||||||||| ||||||||||||||||||| Sbjct: 485 tggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatggcc 544 Query: 660 ctgtcaaacagagaaatactcggaagagatcacc 693 ||||||| | || |||| ||||||||||||||| Sbjct: 545 ctgtcaagcgcaggaatattcggaagagatcacc 578 Score = 101 bits (51), Expect = 5e-18 Identities = 104/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacgaggagggcgccatc 196 ||||||||||||||||||||| |||| |||||||| |||||||||||||| |||| | Sbjct: 25 gtggaggcggtcgacttcgaccccgatgacgacgacctcatggacgagga---cgccgcc 81 Query: 197 gaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcggcggc 256 || ||| ||||||| ||||| || |||||||| || |||||||| || |||||||||||| Sbjct: 82 gaccccacgccggcgcccgccccgcgcctccgctccaccatcgcgggcggcggcggcggc 141 Query: 257 g 257 | Sbjct: 142 g 142
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 147 bits (74), Expect = 9e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 405 ccattgaagggtggattgtactggttactggagttcatgaagaagctcaggaggaggacc 464 |||||||||| |||||||| || || ||||| |||||||||||||||||||| || || | Sbjct: 104658 ccattgaaggatggattgtgctagtcactggggttcatgaagaagctcaggaagatgatc 104717 Query: 465 tccataatattttcggggattatgggcaggtcaagaacttgcatttgaatttggatcgca 524 | || ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 104718 ttcacaatattttccgggactttgggcaggtcaagaacttgcatttgaatttggatcgcc 104777 Query: 525 ggactggatttgtgaagg 542 | |||||||| ||||||| Sbjct: 104778 gaactggattcgtgaagg 104795 Score = 101 bits (51), Expect = 5e-18 Identities = 104/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacgaggagggcgccatc 196 ||||||||||||||||||||| |||| |||||||| |||||||||||||| |||| | Sbjct: 103204 gtggaggcggtcgacttcgaccccgatgacgacgacctcatggacgagga---cgccgcc 103260 Query: 197 gaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcggcggc 256 || ||| ||||||| ||||| || |||||||| || |||||||| || |||||||||||| Sbjct: 103261 gaccccacgccggcgcccgccccgcgcctccgctccaccatcgcgggcggcggcggcggc 103320 Query: 257 g 257 | Sbjct: 103321 g 103321 Score = 97.6 bits (49), Expect = 8e-17 Identities = 126/149 (84%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 540 agggatatgctctaattgagtatgagaacttt-gagcaagcccagcgtgcaataagagaa 598 ||||||||||||| ||||||||||| |||||| ||| |||| ||| |||||||| || | Sbjct: 105089 agggatatgctcttattgagtatga-aactttcgaggaagctcaggctgcaataaaagca 105147 Query: 599 tcagacggaactgagcttctttcgcagataataagtgttgactgggcatttagtaatggc 658 | || |||||||||||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 105148 ttggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatggc 105207 Query: 659 cctgtcaaacagagaaatactcggaagag 687 |||||||| | || |||| ||||||||| Sbjct: 105208 cctgtcaagcgcaggaatattcggaagag 105236
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 147 bits (74), Expect = 9e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 405 ccattgaagggtggattgtactggttactggagttcatgaagaagctcaggaggaggacc 464 |||||||||| |||||||| || || ||||| |||||||||||||||||||| || || | Sbjct: 2272227 ccattgaaggatggattgtgctagtcactggggttcatgaagaagctcaggaagatgatc 2272286 Query: 465 tccataatattttcggggattatgggcaggtcaagaacttgcatttgaatttggatcgca 524 | || ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 2272287 ttcacaatattttccgggactttgggcaggtcaagaacttgcatttgaatttggatcgcc 2272346 Query: 525 ggactggatttgtgaagg 542 | |||||||| ||||||| Sbjct: 2272347 gaactggattcgtgaagg 2272364 Score = 101 bits (51), Expect = 5e-18 Identities = 104/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacgaggagggcgccatc 196 ||||||||||||||||||||| |||| |||||||| |||||||||||||| |||| | Sbjct: 2270773 gtggaggcggtcgacttcgaccccgatgacgacgacctcatggacgagga---cgccgcc 2270829 Query: 197 gaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcggcggc 256 || ||| ||||||| ||||| || |||||||| || |||||||| || |||||||||||| Sbjct: 2270830 gaccccacgccggcgcccgccccgcgcctccgctccaccatcgcgggcggcggcggcggc 2270889 Query: 257 g 257 | Sbjct: 2270890 g 2270890 Score = 97.6 bits (49), Expect = 8e-17 Identities = 126/149 (84%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 540 agggatatgctctaattgagtatgagaacttt-gagcaagcccagcgtgcaataagagaa 598 ||||||||||||| ||||||||||| |||||| ||| |||| ||| |||||||| || | Sbjct: 2272658 agggatatgctcttattgagtatga-aactttcgaggaagctcaggctgcaataaaagca 2272716 Query: 599 tcagacggaactgagcttctttcgcagataataagtgttgactgggcatttagtaatggc 658 | || |||||||||||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 2272717 ttggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatggc 2272776 Query: 659 cctgtcaaacagagaaatactcggaagag 687 |||||||| | || |||| ||||||||| Sbjct: 2272777 cctgtcaagcgcaggaatattcggaagag 2272805 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||| ||||| ||||||||||||||||| Sbjct: 2563660 gcggcggcttcagcggtggcggcggcggcgatg 2563628 Score = 48.1 bits (24), Expect = 0.064 Identities = 30/32 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcg 124 |||||||||| ||||||| ||||||||||||| Sbjct: 21689600 cggcggcggcggcagcgacggcggcggcggcg 21689569 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcgg 122 ||||||||| ||||||| ||||||||||| Sbjct: 21684946 ggcggcggcggcagcgacggcggcggcgg 21684974
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 147 bits (74), Expect = 9e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 405 ccattgaagggtggattgtactggttactggagttcatgaagaagctcaggaggaggacc 464 |||||||||| |||||||| || || ||||| |||||||||||||||||||| || || | Sbjct: 142 ccattgaaggatggattgtgctagtcactggggttcatgaagaagctcaggaagatgatc 201 Query: 465 tccataatattttcggggattatgggcaggtcaagaacttgcatttgaatttggatcgca 524 | || ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 202 ttcacaatattttccgggactttgggcaggtcaagaacttgcatttgaatttggatcgcc 261 Query: 525 ggactggatttgtgaagg 542 | |||||||| ||||||| Sbjct: 262 gaactggattcgtgaagg 279 Score = 97.6 bits (49), Expect = 8e-17 Identities = 126/149 (84%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 540 agggatatgctctaattgagtatgagaacttt-gagcaagcccagcgtgcaataagagaa 598 ||||||||||||| ||||||||||| |||||| ||| |||| ||| |||||||| || | Sbjct: 573 agggatatgctcttattgagtatga-aactttcgaggaagctcaggctgcaataaaagca 631 Query: 599 tcagacggaactgagcttctttcgcagataataagtgttgactgggcatttagtaatggc 658 | || |||||||||||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 632 ttggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatggc 691 Query: 659 cctgtcaaacagagaaatactcggaagag 687 |||||||| | || |||| ||||||||| Sbjct: 692 cctgtcaagcgcaggaatattcggaagag 720
>gb|AY104163.1| Zea mays PCO106378 mRNA sequence Length = 1187 Score = 103 bits (52), Expect = 1e-18 Identities = 247/312 (79%) Strand = Plus / Plus Query: 382 tggcggccctggacccgtgcgctccattgaagggtggattgtactggttactggagttca 441 |||||||||||||||| | | || |||||||| |||||||| |||| || |||||||| Sbjct: 378 tggcggccctggacccatccagtcaattgaaggatggattgtgttggtcacaggagttca 437 Query: 442 tgaagaagctcaggaggaggacctccataatattttcggggattatgggcaggtcaagaa 501 ||||||||||| || || ||||| || ||| |||| || | |||||||||||| || Sbjct: 438 cgaagaagctcaagaagatgaccttcaaaatgctttccaagaatttgggcaggtcaaaaa 497 Query: 502 cttgcatttgaatttggatcgcaggactggatttgtgaagggatatgctctaattgagta 561 | |||||||||||||||| ||| | || |||||||| ||||| || ||| | ||||| || Sbjct: 498 cctgcatttgaatttggaccgccgtaccggatttgtcaaggggtacgctttgattgaata 557 Query: 562 tgagaactttgagcaagcccagcgtgcaataagagaatcagacggaactgagcttctttc 621 ||||| ||||| |||| ||| |||||||| |||| || ||| |||||||| | Sbjct: 558 cgagaagtttgaagaagctcaggctgcaataaaagaactggatggagctgagctttataa 617 Query: 622 gcagataataagtgttgactgggcatttagtaatggccctgtcaaacagagaaatactcg 681 || | ||| |||||||| ||||||||||| | |||||||| |||| ||||||||||| Sbjct: 618 acaaagaatgagtgttgattgggcatttagcagtggccctgctaaacgcagaaatactcg 677 Query: 682 gaagagatcacc 693 ||| || ||||| Sbjct: 678 gaaaaggtcacc 689 Score = 87.7 bits (44), Expect = 7e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 107 gcgatggcggcggcggcgatgaacacggacgtggaggcggtcgacttcgactccgacgac 166 ||||||||||||||||||| |||| | || ||||||| ||||||||||||| ||| ||| Sbjct: 130 gcgatggcggcggcggcgacgaacgccgatgtggaggtggtcgacttcgacctcgatgac 189 Query: 167 gacgatctcatggacgagga 186 ||||| |||||||||||||| Sbjct: 190 gacgacctcatggacgagga 209 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 259 cgacgatgccccgcgtaagactaaggggcgcggcttccgcgaggatcccaactcctc 315 |||||| || ||||||| ||| ||||| ||||||||||||||||| || |||||||| Sbjct: 267 cgacgacgcgccgcgtaggaccaagggccgcggcttccgcgaggaccctaactcctc 323
>gb|BT017264.1| Zea mays clone EL01N0309H05.c mRNA sequence Length = 854 Score = 95.6 bits (48), Expect = 3e-16 Identities = 156/192 (81%) Strand = Plus / Plus Query: 407 attgaagggtggattgtactggttactggagttcatgaagaagctcaggaggaggacctc 466 |||||||| |||||||| ||| ||||||||||||||||||||||| || || |||||| Sbjct: 221 attgaaggatggattgtgttggccactggagttcatgaagaagctcaagaagatgacctc 280 Query: 467 cataatattttcggggattatgggcaggtcaagaacttgcatttgaatttggatcgcagg 526 || ||| |||| || | |||||||||||| ||| |||||||||||||||| || | Sbjct: 281 caaaatgctttccaagaatttgggcaggtcaaaaacctgcatttgaatttggaccgtcgt 340 Query: 527 actggatttgtgaagggatatgctctaattgagtatgagaactttgagcaagcccagcgt 586 || |||||||| ||||| || ||| | ||||| |||||||| ||||| |||| ||| | Sbjct: 341 accggatttgtcaaggggtacgctttgattgaatatgagaagtttgaagaagctcaggct 400 Query: 587 gcaataagagaa 598 ||||||| |||| Sbjct: 401 gcaataaaagaa 412 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 259 cgacgatgccccgcgtaagactaaggggcgcggcttccgcgaggatcccaactcctc 315 |||||| || ||||||| ||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 85 cgacgacgcgccgcgtaggaccaagggccgcggcttccgcgaggaccccaactcctc 141 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 gacgacgacgatctcatggacgagga 186 ||||||||||| |||||||||||||| Sbjct: 2 gacgacgacgacctcatggacgagga 27
>gb|DQ200389.1| Solanum tuberosum clone 066H10 unknown mRNA Length = 1017 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 495 tcaagaacttgcatttgaatttggatcgcaggactggatttgtgaagggatatgc 549 ||||||| |||||||||||| ||||||| ||||||||||||| ||||||||||| Sbjct: 423 tcaagaatttgcatttgaatctggatcgtcggactggatttgtcaagggatatgc 477
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 67.9 bits (34), Expect = 7e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacgagga 186 ||||||||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 9276985 gtggaggcggtcgacttcgaccctgatgacgacgacctcatggacgagga 9277034 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 7332767 ggggcggcggcggcgacgacga 7332746 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 9000579 ggggcggcggcggcgacgacga 9000600 Score = 44.1 bits (22), Expect = 0.99 Identities = 94/116 (81%), Gaps = 4/116 (3%) Strand = Plus / Minus Query: 137 gtggaggcggtcgacttcgactcc-gacgacgacgatctcatggacgaggagggcgccat 195 ||||||||||||||||||||| || | |||| ||| ||||||||||||| |||| Sbjct: 17390764 gtggaggcggtcgacttcgaccccttatgacgtcgacttcatggacgagga---cgccgc 17390708 Query: 196 cgaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcg 251 |||| || ||||||| ||||| || |||||| | || |||||||| || ||||||| Sbjct: 17390707 cgaaaccacgccggcgcccgcccctcgcctctgctccaccatcgcgggtggcggcg 17390652 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 9000697 ggggcggcggcggcgacgacg 9000717 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 30722796 gggcggcggcggcgacgacga 30722816
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 67.9 bits (34), Expect = 7e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacgagga 186 ||||||||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 37239 gtggaggcggtcgacttcgaccctgatgacgacgacctcatggacgagga 37288
>emb|AJ313096.1|BVU313096 Beta vulgaris mRNA for salt tolerance protein 4 (sato4 gene) Length = 612 Score = 61.9 bits (31), Expect = 4e-06 Identities = 133/167 (79%) Strand = Plus / Plus Query: 407 attgaagggtggattgtactggttactggagttcatgaagaagctcaggaggaggacctc 466 ||||| || |||||| |||| || || ||||| |||||||| ||||| || ||||| ||| Sbjct: 286 attgagggctggattatacttgtcacgggagtgcatgaagaggctcaagaagaggatctc 345 Query: 467 cataatattttcggggattatgggcaggtcaagaacttgcatttgaatttggatcgcagg 526 | |||| | || || || | ||| ||| | ||||| |||||||||||| ||||||| | Sbjct: 346 cttaatgtctttggagagtttggccagcttaagaatttgcatttgaatctggatcgtcgt 405 Query: 527 actggatttgtgaagggatatgctctaattgagtatgagaactttga 573 ||||| ||||| ||||| ||||| | || ||||||||||| ||||| Sbjct: 406 actgggtttgtcaagggttatgcattgatcgagtatgagaagtttga 452
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacga 183 ||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 5962571 gtggaggcggtcgacttcgaccatgatgacgacgacctcatggacga 5962617 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatgc 267 ||||||||||||||||||||||| Sbjct: 24914440 ggcggcggcggcgacgacgatgc 24914418 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 7941309 gggggcggcggcggcgacgacg 7941288 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 8372566 ggcggcggcggcgacgacgatg 8372545 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gctgcagcgatggcggcggcggcga 125 ||||||||| ||||||||||||||| Sbjct: 1200120 gctgcagcggtggcggcggcggcga 1200144 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||| ||| || ||||||||||||||||||| Sbjct: 26697364 cggcggtggcagcggcgatggcggcggcggcga 26697396
>emb|AL732382.5|CNS08C95 Oryza sativa chromosome 12, . BAC OJ1126_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104737 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacga 183 ||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 80487 gtggaggcggtcgacttcgaccatgatgacgacgacctcatggacga 80441
>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 169662 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 137 gtggaggcggtcgacttcgactccgacgacgacgatctcatggacga 183 ||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 158216 gtggaggcggtcgacttcgaccatgatgacgacgacctcatggacga 158262
>gb|DQ286856.1| Taiwania cryptomerioides Y14 protein mRNA, complete cds Length = 883 Score = 50.1 bits (25), Expect = 0.016 Identities = 46/53 (86%) Strand = Plus / Plus Query: 497 aagaacttgcatttgaatttggatcgcaggactggatttgtgaagggatatgc 549 |||||| |||| ||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 409 aagaacctgcacctgaatttagatcgcagaactggttttgtaaagggatatgc 461
>ref|NM_001061168.1| Oryza sativa (japonica cultivar-group) Os05g0145600 (Os05g0145600) mRNA, complete cds Length = 1932 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||| ||||| ||||||||||||||||| Sbjct: 158 gcggcggcttcagcggtggcggcggcggcgatg 190
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||| ||||| ||||||||||||||||| Sbjct: 48546 gcggcggcttcagcggtggcggcggcggcgatg 48514
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||| ||||| ||||||||||||||||| Sbjct: 10180 gcggcggcttcagcggtggcggcggcggcgatg 10148
>dbj|AK101887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M02, full insert sequence Length = 1914 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||| ||||| ||||||||||||||||| Sbjct: 159 gcggcggcttcagcggtggcggcggcggcgatg 191
>dbj|AK063945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E09, full insert sequence Length = 1932 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||| ||||| ||||||||||||||||| Sbjct: 158 gcggcggcttcagcggtggcggcggcggcgatg 190
>ref|XM_985899.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 7, transcript variant 2 (Chd7), mRNA Length = 4982 Score = 48.1 bits (24), Expect = 0.064 Identities = 30/32 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcg 124 |||||||||| |||||| |||||||||||||| Sbjct: 68 cggcggcggcggcagcggtggcggcggcggcg 99
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 48.1 bits (24), Expect = 0.064 Identities = 30/32 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcg 124 |||||||||| ||||||| ||||||||||||| Sbjct: 80776 cggcggcggcggcagcgacggcggcggcggcg 80745 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcgg 122 ||||||||| ||||||| ||||||||||| Sbjct: 76122 ggcggcggcggcagcgacggcggcggcgg 76150
>gb|DQ384261.1| Danthonia spicata clone DsTS2-dupl tasselseed2-like short-chain dehydrogenase/reductase gene, partial cds Length = 750 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatgcc 268 |||||||||||||||||||||||| Sbjct: 586 ggcggcggcggcgacgacgatgcc 609
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacgatgc 267 |||||||||||||||||||||||| Sbjct: 17911473 gggcggcggcggcgacgacgatgc 17911450 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatgccccg 271 |||||||||||||||||||||| |||| Sbjct: 20725979 ggcggcggcggcgacgacgatggcccg 20725953 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 4314728 gcggcggctgcggcgatggcggtggcggcg 4314699 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 ggcggcggctgcagcgatggcggcggcggc 123 ||||||||| |||||| ||||||||||||| Sbjct: 25143256 ggcggcggcggcagcggtggcggcggcggc 25143227 Score = 44.1 bits (22), Expect = 0.99 Identities = 31/34 (91%) Strand = Plus / Minus Query: 90 caccggcggcggctgcagcgatggcggcggcggc 123 ||||| |||| || |||||||||||||||||||| Sbjct: 41119884 caccgacggccgcggcagcgatggcggcggcggc 41119851 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 7926179 gggcggcggcggcgacgacga 7926159 Score = 42.1 bits (21), Expect = 3.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcgatgaa 129 ||||||||| ||| ||| |||||||||||||||||| Sbjct: 37127066 cggcggcggatgctgcggcggcggcggcggcgatgaa 37127102 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gcggctgcagcgatggcggcggcgg 122 |||||||||| |||||||||||||| Sbjct: 41554149 gcggctgcagtgatggcggcggcgg 41554173
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacgatgc 267 |||||||||||||||||||||||| Sbjct: 31308 gggcggcggcggcgacgacgatgc 31285
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacgatgc 267 |||||||||||||||||||||||| Sbjct: 158595 gggcggcggcggcgacgacgatgc 158572
>emb|AL732627.14| Mouse DNA sequence from clone RP23-183L6 on chromosome 4, complete sequence Length = 202365 Score = 48.1 bits (24), Expect = 0.064 Identities = 30/32 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcg 124 |||||||||| |||||| |||||||||||||| Sbjct: 129144 cggcggcggcggcagcggtggcggcggcggcg 129175
>emb|CR855040.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0093M15, complete sequence Length = 77107 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 99 cggctgcagcgatggcggcggcggcga 125 |||||| |||||||||||||||||||| Sbjct: 48400 cggctggagcgatggcggcggcggcga 48426
>ref|NM_001066127.1| Oryza sativa (japonica cultivar-group) Os07g0467600 (Os07g0467600) mRNA, partial cds Length = 1479 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatgccccg 271 |||||||||||||||||| |||||||| Sbjct: 254 ggcggcggcggcgacgaccatgccccg 228
>ref|XM_220420.4| PREDICTED: Rattus norvegicus AF4/FMR2 family, member 4 (predicted) (Aff4_predicted), mRNA Length = 10109 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gggggcggcggcggcgacgacga 264 ||||||||||||||||||||||| Sbjct: 54 gggggcggcggcggcgacgacga 32
>ref|XM_001061854.1| PREDICTED: Rattus norvegicus similar to SP9 (predicted) (RGD1559457_predicted), mRNA Length = 5030 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggc 123 ||||||||||||||||| |||||||||||| Sbjct: 1526 cggcggcggctgcagcggcggcggcggcggc 1556
>ref|XM_345371.3| PREDICTED: Rattus norvegicus similar to SP9 (predicted) (RGD1559457_predicted), mRNA Length = 1631 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggc 123 ||||||||||||||||| |||||||||||| Sbjct: 1526 cggcggcggctgcagcggcggcggcggcggc 1556
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacgatgccc 269 |||||||||||||||||||||| |||| Sbjct: 143684 ggggcggcggcggcgacgacgacgccc 143710 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 143656 ggggcggcggcggcgacgacga 143677
>gb|AF106962.2| Volvox carteri f. nagariensis RlsA (rlsA) gene, partial cds; and somatic regenerator RegA (regA) gene, complete cds Length = 22280 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggc 123 ||||||||||||||||| |||||||||||| Sbjct: 15541 cggcggcggctgcagcggcggcggcggcggc 15511
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 238 cgcagggggcggcggcggcgacgacga 264 ||||| ||||||||||||||||||||| Sbjct: 17553195 cgcagagggcggcggcggcgacgacga 17553221 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| ||||||| ||||||||||| Sbjct: 8063753 cggcggcggcggcagcgacggcggcggcgg 8063724 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 4742010 ggggcggcggcggcgacgacg 4741990 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcgg 122 ||||||||| ||||||| ||||||||||| Sbjct: 8059490 ggcggcggcggcagcgacggcggcggcgg 8059518 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 23078981 gggcggcggcggcgacgacga 23079001
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatgccccg 271 |||||||||||||||||| |||||||| Sbjct: 16577078 ggcggcggcggcgacgaccatgccccg 16577104
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacgatgccc 269 |||||||||||||||||||||| |||| Sbjct: 18371294 ggggcggcggcggcgacgacgacgccc 18371320 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 13667206 ggcggcggcggcgacgacgatg 13667185 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 18371266 ggggcggcggcggcgacgacga 18371287 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 30446242 ggggcggcggcggcgacgacga 30446221 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 23420546 cgatggcggcggcggcgatga 23420526
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 caccggcggcggctgcagcgatggcgg 116 |||||||||||||||| |||||||||| Sbjct: 87293 caccggcggcggctgcggcgatggcgg 87319
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatgccccg 271 |||||||||||||||||||||| |||| Sbjct: 68937 ggcggcggcggcgacgacgatggcccg 68911
>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0003B09 Length = 161813 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatgccccg 271 |||||||||||||||||| |||||||| Sbjct: 67698 ggcggcggcggcgacgaccatgccccg 67724
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 238 cgcagggggcggcggcggcgacgacga 264 ||||| ||||||||||||||||||||| Sbjct: 29845 cgcagagggcggcggcggcgacgacga 29871
>dbj|AK065880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047C23, full insert sequence Length = 1483 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatgccccg 271 |||||||||||||||||| |||||||| Sbjct: 258 ggcggcggcggcgacgaccatgccccg 232
>emb|AJ324112.1|HSA324112 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VI23R Length = 762 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacgatg 266 ||||||||||||||||||||||| Sbjct: 177 gggcggcggcggcgacgacgatg 155
>ref|NM_021693.1| Rattus norvegicus SNF1-like kinase (Snf1lk), mRNA gb|AF106937.1|AF106937 Rattus norvegicus protein kinase KID2 (Kid2) mRNA, complete cds Length = 4092 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcggcg 124 ||||||||| |||||| |||||||||||||| Sbjct: 8 ggcggcggcagcagcgttggcggcggcggcg 38
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatgc 267 ||||||||||||||||||||||| Sbjct: 50428 ggcggcggcggcgacgacgatgc 50450
>emb|CT835719.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA002A10, full insert sequence Length = 579 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| ||||| ||||||||||||| Sbjct: 88 cggcggcggcagcagcaatggcggcggcgg 117
>emb|CT831306.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014J07, full insert sequence Length = 1111 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 80 gcggcggctgcggcgatggcggtggcggcg 109
>emb|CR855184.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0145C12, complete sequence Length = 79624 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 38267 ggcggcggcggcgacgacgatg 38246
>ref|XM_001220213.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_00993) mRNA, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 1911 gggggcggcggcggcgacgacg 1890
>ref|NM_001043010.1| Drosophila melanogaster lethal (2) 01289 CG9432-RD, transcript variant D (l(2)01289), mRNA Length = 6452 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 162 acgacgacgatctcatggacgaggag 187 |||||| ||||||||||||||||||| Sbjct: 1471 acgacggcgatctcatggacgaggag 1496
>ref|NM_001072383.1| Oryza sativa (japonica cultivar-group) Os11g0169400 (Os11g0169400) mRNA, complete cds Length = 1396 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| || |||||||||||||||| Sbjct: 243 cggcggcggcggcggcgatggcggcggcgg 272
>ref|NM_001056677.1| Oryza sativa (japonica cultivar-group) Os03g0357500 (Os03g0357500) mRNA, complete cds Length = 1112 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 590 ggcggcggcggcgacgacgatg 611
>ref|NM_001051865.1| Oryza sativa (japonica cultivar-group) Os01g0936900 (Os01g0936900) mRNA, complete cds Length = 1140 Score = 44.1 bits (22), Expect = 0.99 Identities = 31/34 (91%) Strand = Plus / Plus Query: 90 caccggcggcggctgcagcgatggcggcggcggc 123 ||||| |||| || |||||||||||||||||||| Sbjct: 153 caccgacggccgcggcagcgatggcggcggcggc 186
>ref|NM_001048751.1| Oryza sativa (japonica cultivar-group) Os01g0182200 (Os01g0182200) mRNA, complete cds Length = 1112 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 85 gcggcggctgcggcgatggcggtggcggcg 114
>ref|XM_001141113.1| PREDICTED: Pan troglodytes hypothetical protein LOC738004 (LOC738004), mRNA Length = 8131 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| |||||| |||||||||||| Sbjct: 137 cggcggcggcggcagcggtggcggcggcgg 166
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 acgacgacgatctcatggacgaggag 187 |||||| ||||||||||||||||||| Sbjct: 2621656 acgacggcgatctcatggacgaggag 2621631
>ref|NW_001091934.1| Theileria annulata strain Ankara clone C6 Length = 1898942 Score = 44.1 bits (22), Expect = 0.99 Identities = 34/38 (89%) Strand = Plus / Plus Query: 426 tggttactggagttcatgaagaagctcaggaggaggac 463 ||||||||||| | || |||||||| |||||||||||| Sbjct: 1413054 tggttactggaatccacgaagaagcccaggaggaggac 1413091
>ref|XM_001090058.1| PREDICTED: Macaca mulatta similar to Y97E10AL.1 (LOC698311), mRNA Length = 602 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| |||||| |||||||||||| Sbjct: 32 cggcggcggcggcagcggtggcggcggcgg 61
>emb|CT987031.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 954 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 92 ccggcggcggctgcagcgatggcggcggcg 121 ||||||||||| || ||||||||||||||| Sbjct: 201 ccggcggcggcggcggcgatggcggcggcg 230
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 tgcagcgatggcggcggcggcg 124 |||||||||||||||||||||| Sbjct: 107165 tgcagcgatggcggcggcggcg 107186
>gb|AC104202.13| Mus musculus chromosome 5, clone RP24-558F5, complete sequence Length = 189841 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 436 agttcatgaagaagctcaggaggagg 461 |||||| ||||||||||||||||||| Sbjct: 104480 agttcaggaagaagctcaggaggagg 104505
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| || |||||||||||||||| Sbjct: 76194 cggcggcggcggcggcgatggcggcggcgg 76165
>ref|NM_165485.1| Drosophila melanogaster lethal (2) 01289 CG9432-RB, transcript variant B (l(2)01289), mRNA Length = 5996 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 162 acgacgacgatctcatggacgaggag 187 |||||| ||||||||||||||||||| Sbjct: 1471 acgacggcgatctcatggacgaggag 1496
>gb|DQ096548.1| Mesocestoides sp. A KP-2005 isolate KAP112 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 472 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 152 ggcggcggcggcgacgacgatg 173
>gb|DQ096547.1| Mesocestoides sp. A KP-2005 isolate KAP111 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 472 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 152 ggcggcggcggcgacgacgatg 173
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 122195 ggggcggcggcggcgacgacga 122216
>ref|NM_064568.1| Caenorhabditis elegans JuMonJi (transcription factor) Domain protein family member (jmjd-2) (jmjd-2) mRNA, complete cds Length = 2685 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 1825 ggcggcggcggcgacgacgatg 1846
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 158162 ggggcggcggcggcgacgacga 158141 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 158304 ggggcggcggcggcgacgacg 158284
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| || |||||||||||||||| Sbjct: 3338100 cggcggcggcggcggcgatggcggcggcgg 3338129 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 2361976 gggcggcggcggcgacgacga 2361956 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gcagcgatggcggcggcggcg 124 ||||||||||||||||||||| Sbjct: 4362214 gcagcgatggcggcggcggcg 4362234 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 ggcggctgcagcgatggcggcggcg 121 ||||||||| ||||||||||||||| Sbjct: 21428273 ggcggctgcggcgatggcggcggcg 21428249
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 20895763 ggggcggcggcggcgacgacga 20895742 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 20895905 ggggcggcggcggcgacgacg 20895885
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 4821133 gggggcggcggcggcgacgacg 4821154 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ggcggcggcgacgacgatgccc 269 |||||||||||||||||||||| Sbjct: 23248434 ggcggcggcgacgacgatgccc 23248455 Score = 44.1 bits (22), Expect = 0.99 Identities = 34/38 (89%) Strand = Plus / Minus Query: 90 caccggcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||||||| || |||| | |||||||||||||| Sbjct: 29529124 caccggcggcggcagcggcgacgacggcggcggcgatg 29529087 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 17986911 cggcggcggcggcggcgacggcggcggcggcga 17986943 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| || |||||||||||||||||| Sbjct: 21844503 cggcggcggcggcgatggcggcggcggcg 21844531 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 cagggggcggcggcggcgacgacga 264 |||| |||||||||||||||||||| Sbjct: 23872716 caggcggcggcggcggcgacgacga 23872740 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 27496382 cggcggcggcggcggcgacggcggcggcggcga 27496414 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 29240245 cgatggcggcggcggcgatga 29240225
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 4941038 ggcggcggcggcgacgacgatg 4941059 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 25246652 ggcggcggcggcgacgacgatg 25246631 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || ||| ||||||||||||||| Sbjct: 4647009 cggcggcggcggcggcggtggcggcggcggcga 4647041 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gcggcggcggcgacgacgatg 266 ||||||||||||||||||||| Sbjct: 20919745 gcggcggcggcgacgacgatg 20919765
>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR07J20, complete sequence Length = 181771 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 acgacgacgatctcatggacgaggag 187 |||||| ||||||||||||||||||| Sbjct: 27715 acgacggcgatctcatggacgaggag 27690
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 44.1 bits (22), Expect = 0.99 Identities = 31/34 (91%) Strand = Plus / Minus Query: 90 caccggcggcggctgcagcgatggcggcggcggc 123 ||||| |||| || |||||||||||||||||||| Sbjct: 16939 caccgacggccgcggcagcgatggcggcggcggc 16906
>emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1168G10, complete sequence Length = 142295 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 119700 ggcggcggcggcgacgacgatg 119721
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 80666 gggggcggcggcggcgacgacg 80645
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 28792 ggcggcggcggcgacgacgatg 28771
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 128319 ggcggcggcggcgacgacgatg 128298
>emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015C06, complete sequence Length = 147676 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 53447 ggcggcggcggcgacgacgatg 53468
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| ||||||| ||||||||||| Sbjct: 135923 cggcggcggcggcagcgacggcggcggcgg 135894 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcgg 122 ||||||||| ||||||| ||||||||||| Sbjct: 131660 ggcggcggcggcagcgacggcggcggcgg 131688
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 94498 gcggcggctgcggcgatggcggtggcggcg 94469
>dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0035I14 Length = 117919 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 ggcggcggctgcagcgatggcggcggcggc 123 ||||||||| |||||| ||||||||||||| Sbjct: 9265 ggcggcggcggcagcggtggcggcggcggc 9236
>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0688A04 Length = 143969 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 ggcggcggctgcagcgatggcggcggcggc 123 ||||||||| |||||| ||||||||||||| Sbjct: 142864 ggcggcggcggcagcggtggcggcggcggc 142835
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 44.1 bits (22), Expect = 0.99 Identities = 34/38 (89%) Strand = Plus / Minus Query: 90 caccggcggcggctgcagcgatggcggcggcggcgatg 127 ||||||||||||| || |||| | |||||||||||||| Sbjct: 93630 caccggcggcggcagcggcgacgacggcggcggcgatg 93593
>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0648E08 Length = 135175 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 96537 gggggcggcggcggcgacgacg 96558
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 8616 gggggcggcggcggcgacgacg 8637
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ggcggcggcgacgacgatgccc 269 |||||||||||||||||||||| Sbjct: 83196 ggcggcggcgacgacgatgccc 83217
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 108575 ggggcggcggcggcgacgacga 108554
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 44.1 bits (22), Expect = 0.99 Identities = 94/116 (81%), Gaps = 4/116 (3%) Strand = Plus / Minus Query: 137 gtggaggcggtcgacttcgactcc-gacgacgacgatctcatggacgaggagggcgccat 195 ||||||||||||||||||||| || | |||| ||| ||||||||||||| |||| Sbjct: 2761 gtggaggcggtcgacttcgaccccttatgacgtcgacttcatggacgagga---cgccgc 2705 Query: 196 cgaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcg 251 |||| || ||||||| ||||| || |||||| | || |||||||| || ||||||| Sbjct: 2704 cgaaaccacgccggcgcccgcccctcgcctctgctccaccatcgcgggtggcggcg 2649
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 44.1 bits (22), Expect = 0.99 Identities = 94/116 (81%), Gaps = 4/116 (3%) Strand = Plus / Minus Query: 137 gtggaggcggtcgacttcgactcc-gacgacgacgatctcatggacgaggagggcgccat 195 ||||||||||||||||||||| || | |||| ||| ||||||||||||| |||| Sbjct: 163447 gtggaggcggtcgacttcgaccccttatgacgtcgacttcatggacgagga---cgccgc 163391 Query: 196 cgaaccctcgccggcccccgctccccgcctccgatctaccatcgcagggggcggcg 251 |||| || ||||||| ||||| || |||||| | || |||||||| || ||||||| Sbjct: 163390 cgaaaccacgccggcgcccgcccctcgcctctgctccaccatcgcgggtggcggcg 163335
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 41025 ggggcggcggcggcgacgacga 41046 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 41143 ggggcggcggcggcgacgacg 41163
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacga 264 |||||||||||||||||||||| Sbjct: 73188 ggggcggcggcggcgacgacga 73209 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 73306 ggggcggcggcggcgacgacg 73326
>dbj|AK109424.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A09, full insert sequence Length = 1112 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 85 gcggcggctgcggcgatggcggtggcggcg 114
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| ||||||| ||||||||||| Sbjct: 32064 cggcggcggcggcagcgacggcggcggcgg 32035 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcgg 122 ||||||||| ||||||| ||||||||||| Sbjct: 27801 ggcggcggcggcagcgacggcggcggcgg 27829
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0033D20, from chromosome 3, complete sequence Length = 128707 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 62903 ggcggcggcggcgacgacgatg 62882
>dbj|AK110948.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-H08, full insert sequence Length = 1396 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcgg 122 |||||||||| || |||||||||||||||| Sbjct: 243 cggcggcggcggcggcgatggcggcggcgg 272
>dbj|AK107779.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-C04, full insert sequence Length = 1113 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 591 ggcggcggcggcgacgacgatg 612
>dbj|AK106185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D07, full insert sequence Length = 1087 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 44 gcggcggctgcggcgatggcggtggcggcg 73
>dbj|AK106173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C03, full insert sequence Length = 1122 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 104 gcggcggctgcggcgatggcggtggcggcg 133
>ref|XM_950259.1| Theileria annulata strain Ankara hypothetical protein (TA18815) partial mRNA Length = 297 Score = 44.1 bits (22), Expect = 0.99 Identities = 34/38 (89%) Strand = Plus / Plus Query: 426 tggttactggagttcatgaagaagctcaggaggaggac 463 ||||||||||| | || |||||||| |||||||||||| Sbjct: 53 tggttactggaatccacgaagaagcccaggaggaggac 90
>dbj|AK069381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M02, full insert sequence Length = 1092 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||||||| ||||||| Sbjct: 65 gcggcggctgcggcgatggcggtggcggcg 94
>gb|AF216974.1|AF216974 Drosophila melanogaster clone Z5 l(2)01289 long form mRNA, partial cds Length = 2091 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 162 acgacgacgatctcatggacgaggag 187 |||||| ||||||||||||||||||| Sbjct: 1471 acgacggcgatctcatggacgaggag 1496
>gb|AF216973.1|AF216973 Drosophila melanogaster l(2)01289 gene, complete cds, alternatively spliced products Length = 20796 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 162 acgacgacgatctcatggacgaggag 187 |||||| ||||||||||||||||||| Sbjct: 7358 acgacggcgatctcatggacgaggag 7383
>gb|AF083096.1|AF083096 Canis familiaris transcription factor HOXA13 (HOXA13) gene, partial cds Length = 390 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggcg 124 ||||||||||||||| ||||||||||||| Sbjct: 323 gcggcggctgcagcggcggcggcggcggcg 294
>emb|AL110490.1|CEY48B6A Caenorhabditis elegans YAC Y48B6A, complete sequence Length = 101295 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 87305 ggcggcggcggcgacgacgatg 87284
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 gggggcggcggcggcgacgacg 263 |||||||||||||||||||||| Sbjct: 58861 gggggcggcggcggcgacgacg 58882
>emb|AL731877.4|CNS08C8H Oryza sativa chromosome 12, . BAC OJ1368_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104296 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ggcggcggcggcgacgacgatg 266 |||||||||||||||||||||| Sbjct: 27931 ggcggcggcggcgacgacgatg 27952
>emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chromosome 12, complete sequence Length = 168814 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Plus Query: 94 ggcggcggctgcagcgatggcggcggcggc 123 |||||||||||||||| |||||||||||| Sbjct: 70613 ggcggcggctgcagcggcggcggcggcggc 70642
>emb|CT835715.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA035M10, full insert sequence Length = 1324 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 188 ggggcggcggcggcgacgacg 208
>emb|CR855155.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525E10, complete sequence Length = 116856 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gcggcggcggcgacgacgatg 266 ||||||||||||||||||||| Sbjct: 114360 gcggcggcggcgacgacgatg 114380
>ref|NM_016839.2| Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 2, mRNA Length = 2596 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 351 ccggcggcggcggcagcggcggcggcggcggcg 319
>ref|NM_002897.3| Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 3, mRNA Length = 2429 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 351 ccggcggcggcggcagcggcggcggcggcggcg 319
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 cggctgcagcgatggcggcggcggc 123 ||||||| ||||||||||||||||| Sbjct: 498563 cggctgcggcgatggcggcggcggc 498587
>ref|NM_003760.3| Homo sapiens eukaryotic translation initiation factor 4 gamma, 3 (EIF4G3), mRNA Length = 6205 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 204 ccggcggcggcagcagcggcggcggcggcggcg 236
>ref|NM_001073847.1| Oryza sativa (japonica cultivar-group) Os12g0624100 (Os12g0624100) mRNA, complete cds Length = 1494 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||| ||| || ||||||||||||||||||| Sbjct: 847 cggcggtggcagcggcgatggcggcggcggcga 815
>ref|NM_001072574.1| Oryza sativa (japonica cultivar-group) Os12g0125000 (Os12g0125000) mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 gctgcagcgatggcggcggcggcga 125 ||||||||| ||||||||||||||| Sbjct: 718 gctgcagcggtggcggcggcggcga 694
>ref|NM_001074706.1| Oryza sativa (japonica cultivar-group) Os11g0587600 (Os11g0587600) mRNA, partial cds Length = 5192 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 ggcggctgcagcgatggcggcggcg 121 ||||||||| ||||||||||||||| Sbjct: 96 ggcggctgcggcgatggcggcggcg 120
>ref|NM_001072454.1| Oryza sativa (japonica cultivar-group) Os11g0186300 (Os11g0186300) mRNA, partial cds Length = 3015 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gcagcgatggcggcggcggcg 124 ||||||||||||||||||||| Sbjct: 779 gcagcgatggcggcggcggcg 799
>ref|NM_001072295.1| Oryza sativa (japonica cultivar-group) Os11g0151100 (Os11g0151100) mRNA, complete cds Length = 1059 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 73 gggcggcggcggcgacgacga 53
>ref|NM_001065044.1| Oryza sativa (japonica cultivar-group) Os06g0704500 (Os06g0704500) mRNA, partial cds Length = 1446 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 1215 cgatggcggcggcggcgatga 1195
>ref|NM_001064869.1| Oryza sativa (japonica cultivar-group) Os06g0671900 (Os06g0671900) mRNA, complete cds Length = 1576 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 82 cggcggcggcggcggcgacggcggcggcggcga 50
>ref|NM_001058676.1| Oryza sativa (japonica cultivar-group) Os04g0168100 (Os04g0168100) mRNA, complete cds Length = 918 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || ||| ||||||||||||||| Sbjct: 735 cggcggcggcggcggcggtggcggcggcggcga 703
>ref|NM_001057218.1| Oryza sativa (japonica cultivar-group) Os03g0622300 (Os03g0622300) mRNA, complete cds Length = 641 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 180 cgatggcggcggcggcgatga 200
>ref|NM_001051398.1| Oryza sativa (japonica cultivar-group) Os01g0858900 (Os01g0858900) mRNA, complete cds Length = 1617 Score = 42.1 bits (21), Expect = 3.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcgatgaa 129 ||||||||| ||| ||| |||||||||||||||||| Sbjct: 105 cggcggcggatgctgcggcggcggcggcggcgatgaa 141
>ref|NM_001049100.1| Oryza sativa (japonica cultivar-group) Os01g0243600 (Os01g0243600) mRNA, complete cds Length = 702 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 381 gggcggcggcggcgacgacga 401
>ref|XM_512139.2| PREDICTED: Pan troglodytes similar to methyl-CpG binding protein MBD2 (LOC455427), mRNA Length = 5191 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 561 cggcggcggcggcagcggtggcggcggcg 589
>ref|XM_001144050.1| PREDICTED: Pan troglodytes hypothetical protein LOC741461 (LOC741461), mRNA Length = 4752 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 840 gggcggcggcggcgacgacga 820
>ref|XM_508449.2| PREDICTED: Pan troglodytes deltex 4 homolog (DTX4), mRNA Length = 5739 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gcagggggcggcggcggcgac 259 ||||||||||||||||||||| Sbjct: 165 gcagggggcggcggcggcgac 185
>ref|XM_528445.2| PREDICTED: Pan troglodytes PR domain containing 12 (PRDM12), mRNA Length = 2485 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| |||||| |||||||||||||| Sbjct: 1126 cggcggcggcggcagcggcggcggcggcggcga 1094
>ref|XM_520840.2| PREDICTED: Pan troglodytes kelch-like 17 (KLHL17), mRNA Length = 3216 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 |||||||||| ||| |||||||||||||| Sbjct: 105 cggcggctgcggcggtggcggcggcggcg 77
>ref|XM_942694.2| PREDICTED: Homo sapiens chromosome 19 open reading frame 7, transcript variant 4 (C19orf7), mRNA Length = 6116 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 ggcggctgcagcgatggcggcggcggcga 125 |||||| || ||||||||||||||||||| Sbjct: 109 ggcggcggcggcgatggcggcggcggcga 81
>ref|XM_028253.6| PREDICTED: Homo sapiens chromosome 19 open reading frame 7, transcript variant 1 (C19orf7), mRNA Length = 6116 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 ggcggctgcagcgatggcggcggcggcga 125 |||||| || ||||||||||||||||||| Sbjct: 109 ggcggcggcggcgatggcggcggcggcga 81
>emb|CR933818.11| Zebrafish DNA sequence from clone DKEY-45N22 in linkage group 16, complete sequence Length = 243546 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 495 tcaagaacttgcatttgaatttgga 519 |||||||||||||||| |||||||| Sbjct: 143753 tcaagaacttgcatttaaatttgga 143777
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 tcgacttcgactccgacgacgacga 171 ||||||||||| ||||||||||||| Sbjct: 3789923 tcgacttcgaccccgacgacgacga 3789947
>gb|BC115976.1| Mus musculus forkhead box B2, mRNA (cDNA clone IMAGE:40105285), complete cds Length = 1205 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggc 123 ||||||||||||||| |||||||||||| Sbjct: 653 gcggcggctgcagcggcggcggcggcggc 625
>ref|XM_001065210.1| PREDICTED: Rattus norvegicus hypothetical protein LOC683279 (LOC683279), mRNA Length = 537 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| |||||| |||||||||||||| Sbjct: 216 cggcggcggcagcggtggcggcggcggcg 188
>ref|XM_001082249.1| PREDICTED: Macaca mulatta similar to methyl-CpG binding domain protein 2 isoform 1 (LOC693801), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 450 cggcggcggcggcagcggtggcggcggcg 478
>ref|XM_001087862.1| PREDICTED: Macaca mulatta similar to kelch-like 17 (LOC699402), mRNA Length = 1743 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 |||||||||| ||| |||||||||||||| Sbjct: 108 cggcggctgcggcggtggcggcggcggcg 80
>gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map human otholog p11.4, complete sequence Length = 203345 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| |||||| |||||||||||||| Sbjct: 8401 cggcggcagcagcggtggcggcggcggcg 8373
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cggctgcagcgatggcggcggcggc 123 |||| |||||||||||||||||||| Sbjct: 5348662 cggcggcagcgatggcggcggcggc 5348638
>ref|XM_001000641.1| PREDICTED: Mus musculus leucine rich repeat containing 47 (Lrrc47), mRNA Length = 1686 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gcgatggcggcggcggcgatg 127 ||||||||||||||||||||| Sbjct: 64 gcgatggcggcggcggcgatg 84
>gb|DQ435611.1| Sus scrofa SMCX (SMCX) gene, 5' UTR Length = 457 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 gatggcggcggcggcgatgaa 129 ||||||||||||||||||||| Sbjct: 227 gatggcggcggcggcgatgaa 247
>gb|AC144852.3| Mus musculus BAC clone RP24-341K21 from chromosome 10, complete sequence Length = 169565 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 ||||||||||||| ||| |||||||||| |||| Sbjct: 19046 cggcggcggctgcggcggtggcggcggcagcga 19078
>gb|AY770836.1| Salix burjatica microsatellite SB880 sequence Length = 190 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gcgatggcggcggcggcgatg 127 ||||||||||||||||||||| Sbjct: 132 gcgatggcggcggcggcgatg 152
>gb|AY023162.1| Oryza sativa microsatellite MRG5487 containing (GCG)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || ||| ||||||||||||||| Sbjct: 108 cggcggcggcggcggcggtggcggcggcggcga 140
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gcagcgatggcggcggcggcg 124 ||||||||||||||||||||| Sbjct: 143724 gcagcgatggcggcggcggcg 143744
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gcagcgatggcggcggcggcg 124 ||||||||||||||||||||| Sbjct: 13577 gcagcgatggcggcggcggcg 13597
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 137975 gggcggcggcggcgacgacga 137955
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 14118 gggcggcggcggcgacgacga 14098
>gb|BC032638.1| Homo sapiens methyl-CpG binding domain protein 2, mRNA (cDNA clone MGC:45085 IMAGE:5496721), complete cds Length = 1804 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 403 cggcggcggcggcagcggtggcggcggcg 431
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| || |||||||||||||||||| Sbjct: 3964418 cggcggcggcggcgatggcggcggcggcg 3964390
>gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, complete sequence Length = 180079 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 ||||||||||||| ||| |||||||||| |||| Sbjct: 168460 cggcggcggctgcggcggtggcggcggcagcga 168492
>gb|BC012993.2| Homo sapiens RNA binding motif, single stranded interacting protein 1, mRNA (cDNA clone MGC:3332 IMAGE:3530898), complete cds Length = 1655 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 59 ccggcggcggcggcagcggcggcggcggcggcg 27
>gb|BC012992.2| Homo sapiens RNA binding motif, single stranded interacting protein 1, mRNA (cDNA clone MGC:3331 IMAGE:3530897), complete cds Length = 1655 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 59 ccggcggcggcggcagcggcggcggcggcggcg 27
>gb|BC072413.1| Homo sapiens eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:6165611), partial cds Length = 5764 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 204 ccggcggcggcagcagcggcggcggcggcggcg 236
>gb|BC018662.1| Homo sapiens protein tyrosine phosphatase type IVA, member 2, mRNA (cDNA clone IMAGE:4108553), partial cds Length = 1692 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| | |||| ||||||||||||||| Sbjct: 288 cggcggcggcggtagcggtggcggcggcggcga 256
>gb|AY526403.1| Arachis hypogaea clone PM647 microsatellite sequence Length = 254 Score = 42.1 bits (21), Expect = 3.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcgatgaa 129 |||||||||| || ||| |||||||||||||||||| Sbjct: 165 cggcggcggcggcggcggcggcggcggcggcgatgaa 201
>gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL000798.1 R2R3-MYB gene region Length = 12635 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gctgcagcgatggcggcggcggcga 125 ||||||||| ||||||||||||||| Sbjct: 5392 gctgcagcggtggcggcggcggcga 5416
>gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosome 19, complete sequence Length = 168526 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcggcggc 123 ||||||||||||||| |||||||||||| Sbjct: 165235 gcggcggctgcagcggcggcggcggcggc 165263
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 ggcggctgcagcgatggcggcggcg 121 ||||||||| ||||||||||||||| Sbjct: 86023 ggcggctgcggcgatggcggcggcg 85999
>ref|NM_015832.3| Homo sapiens methyl-CpG binding domain protein 2 (MBD2), transcript variant testis-specific, mRNA Length = 1357 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 562 cggcggcggcggcagcggtggcggcggcg 590
>dbj|AB028987.2| Homo sapiens mRNA for KIAA1064 protein, partial cds Length = 6115 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 ggcggctgcagcgatggcggcggcggcga 125 |||||| || ||||||||||||||||||| Sbjct: 109 ggcggcggcggcgatggcggcggcggcga 81
>ref|NM_003927.3| Homo sapiens methyl-CpG binding domain protein 2 (MBD2), transcript variant 1, mRNA Length = 2584 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 562 cggcggcggcggcagcggtggcggcggcg 590
>ref|NM_080392.2| Homo sapiens protein tyrosine phosphatase type IVA, member 2 (PTP4A2), transcript variant 2, mRNA Length = 1952 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| | |||| ||||||||||||||| Sbjct: 317 cggcggcggcggtagcggtggcggcggcggcga 285
>ref|NM_080391.2| Homo sapiens protein tyrosine phosphatase type IVA, member 2 (PTP4A2), transcript variant 1, mRNA Length = 2158 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| | |||| ||||||||||||||| Sbjct: 317 cggcggcggcggtagcggtggcggcggcggcga 285
>gb|AC159112.2| Pan troglodytes BAC clone CH251-495D16 from chromosome unknown, complete sequence Length = 134235 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| |||||| |||||||||||||| Sbjct: 50735 cggcggcggcggcagcggcggcggcggcggcga 50767
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 gacgacgacgatctcatggac 181 ||||||||||||||||||||| Sbjct: 1272017 gacgacgacgatctcatggac 1272037
>dbj|AK154897.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110M03 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, typical subtype/Leucine-rich region profile containing protein, full insert sequence Length = 3423 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gcgatggcggcggcggcgatg 127 ||||||||||||||||||||| Sbjct: 41 gcgatggcggcggcggcgatg 61
>gb|AC093462.11| Homo sapiens chromosome 18, clone RP11-850A17, complete sequence Length = 203485 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 144132 cggcggcggcggcagcggtggcggcggcg 144160
>emb|CR700208.2|CNS0G38C Tetraodon nigroviridis full-length cDNA Length = 1263 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 441 atgaagaagctcaggaggagg 421
>emb|CR700000.1|CNS0G32K Tetraodon nigroviridis full-length cDNA Length = 1260 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 423 atgaagaagctcaggaggagg 403
>emb|CR699487.2|CNS0G2OB Tetraodon nigroviridis full-length cDNA Length = 1587 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 752 atgaagaagctcaggaggagg 732
>emb|CR692149.2|CNS0FX0H Tetraodon nigroviridis full-length cDNA Length = 1586 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 750 atgaagaagctcaggaggagg 730
>emb|CR688398.1|CNS0FU4A Tetraodon nigroviridis full-length cDNA Length = 1240 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 406 atgaagaagctcaggaggagg 386
>emb|CR687947.2|CNS0FTRR Tetraodon nigroviridis full-length cDNA Length = 1224 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 396 atgaagaagctcaggaggagg 376
>emb|CR678918.2|CNS0FMSY Tetraodon nigroviridis full-length cDNA Length = 1200 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 371 atgaagaagctcaggaggagg 351
>emb|CR681214.2|CNS0FOKQ Tetraodon nigroviridis full-length cDNA Length = 1256 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 419 atgaagaagctcaggaggagg 399
>emb|CR680967.2|CNS0FODV Tetraodon nigroviridis full-length cDNA Length = 1174 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 333 atgaagaagctcaggaggagg 313
>emb|CR680859.2|CNS0FOAV Tetraodon nigroviridis full-length cDNA Length = 1160 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 330 atgaagaagctcaggaggagg 310
>emb|CR679157.2|CNS0FMZL Tetraodon nigroviridis full-length cDNA Length = 1164 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 333 atgaagaagctcaggaggagg 313
>emb|CR667085.2|CNS0FDOZ Tetraodon nigroviridis full-length cDNA Length = 1174 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 333 atgaagaagctcaggaggagg 313
>emb|CR660368.2|CNS0F8IE Tetraodon nigroviridis full-length cDNA Length = 1251 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 417 atgaagaagctcaggaggagg 397
>emb|CR657012.2|CNS0F5X6 Tetraodon nigroviridis full-length cDNA Length = 1247 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 418 atgaagaagctcaggaggagg 398
>emb|CR646309.1|CNS0EXNV Tetraodon nigroviridis full-length cDNA Length = 1376 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 543 atgaagaagctcaggaggagg 523
>emb|CR639949.2|CNS0ESR7 Tetraodon nigroviridis full-length cDNA Length = 1274 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaagaagctcaggaggagg 461 ||||||||||||||||||||| Sbjct: 446 atgaagaagctcaggaggagg 426
>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13 Contains the 5' UTR of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3, the 3' end of the ECE1 gene for endothelin converting enzyme 1, a novel gene and a CpG island, complete sequence Length = 109906 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 4273 ccggcggcggcagcagcggcggcggcggcggcg 4241
>emb|AL391259.15| Human DNA sequence from clone RP11-469E19 on chromosome Xp11.4-21.2 Contains a chloride intracellular channel 4 (CLIC4) pseudogene the 5' end of the USP9X gene for X chromosome ubiquitin specific protease 9 (Drosophila fat facets related) and a CpG island, complete sequence Length = 163520 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| |||||| |||||||||||||| Sbjct: 74487 cggcggcagcagcggtggcggcggcggcg 74459
>dbj|AB209119.1| Homo sapiens mRNA for eukaryotic translation initiation factor 4 gamma, 3 variant protein Length = 6193 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 207 ccggcggcggcagcagcggcggcggcggcggcg 239
>dbj|D82361.2| Homo sapiens MSSP-2 gene for c-myc single-strand binding protein, partial cds Length = 14148 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 1698 ccggcggcggcggcagcggcggcggcggcggcg 1666
>gb|AF394196.1|AF394196 Simian adenovirus 25, complete genome Length = 36521 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gcgatggcggcggcggcgatg 127 ||||||||||||||||||||| Sbjct: 13948 gcgatggcggcggcggcgatg 13968
>emb|AL136115.21| Human DNA sequence from clone RP4-534N18 on chromosome 1p34.2-35.3 Contains the PTP4A2 gene for tyrosine phosphatase type IVA, a novel gene and a CpG island, complete sequence Length = 118085 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| | |||| ||||||||||||||| Sbjct: 68089 cggcggcggcggtagcggtggcggcggcggcga 68121
>gb|BC094573.1| Mus musculus leucine rich repeat containing 47, mRNA (cDNA clone MGC:106431 IMAGE:30354494), complete cds Length = 3407 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gcgatggcggcggcggcgatg 127 ||||||||||||||||||||| Sbjct: 1 gcgatggcggcggcggcgatg 21
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gcggctgcagcgatggcggcggcgg 122 |||||||||| |||||||||||||| Sbjct: 110442 gcggctgcagtgatggcggcggcgg 110466
>emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp Length = 1308 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 gctgcagcgatggcggcggcggcga 125 ||||||||| ||||||||||||||| Sbjct: 718 gctgcagcggtggcggcggcggcga 694
>ref|NM_008023.1| Mus musculus forkhead box B2 (Foxb2), mRNA emb|X92591.1|MMFKH4 M.musculus mRNA for fkh-4 protein Length = 1515 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 95 gcggcggctgcagcgatggcggcggcggc 123 ||||||||||||||| |||||||||||| Sbjct: 963 gcggcggctgcagcggcggcggcggcggc 935
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 2828046 gggcggcggcggcgacgacga 2828066
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| || |||||||||||||||||| Sbjct: 155099 cggcggcggcggcgatggcggcggcggcg 155071
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| || |||||||||||||||||| Sbjct: 164490 cggcggcggcggcgatggcggcggcggcg 164462
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gcggcggcggcgacgacgatg 266 ||||||||||||||||||||| Sbjct: 22968 gcggcggcggcgacgacgatg 22988
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || ||| ||||||||||||||| Sbjct: 37142 cggcggcggcggcggcggtggcggcggcggcga 37174
>emb|AL807372.1|NCB23E9 Neurospora crassa DNA linkage group II BAC clone B23E9 Length = 64710 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcgg 119 |||||||| |||||||||||||||| Sbjct: 50194 gcggcggcggcagcgatggcggcgg 50218
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 42.1 bits (21), Expect = 3.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcgatgaa 129 ||||||||| ||| ||| |||||||||||||||||| Sbjct: 1722 cggcggcggatgctgcggcggcggcggcggcgatgaa 1758
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 42.1 bits (21), Expect = 3.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcgatgaa 129 ||||||||| ||| ||| |||||||||||||||||| Sbjct: 128207 cggcggcggatgctgcggcggcggcggcggcgatgaa 128243
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 121125 gggcggcggcggcgacgacga 121105
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 32491 gggcggcggcggcgacgacga 32471
>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence Length = 180568 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 73834 cggcggcggcggcagcggtggcggcggcg 73862
>gb|AC106886.3| Homo sapiens chromosome 16 clone RP11-2C24, complete sequence Length = 207950 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 38614 gggcggcggcggcgacgacga 38594
>gb|AC008755.8| Homo sapiens chromosome 19 clone CTD-3026N16, complete sequence Length = 203912 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 ggcggctgcagcgatggcggcggcggcga 125 |||||| || ||||||||||||||||||| Sbjct: 139345 ggcggcggcggcgatggcggcggcggcga 139373
>gb|AC093249.4| Homo sapiens chromosome 16 clone RP11-146F11, complete sequence Length = 185664 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 47412 gggcggcggcggcgacgacga 47432
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 2080 gggcggcggcggcgacgacga 2100
>gb|AC131754.3| Homo sapiens BAC clone RP11-335E9 from 2, complete sequence Length = 112520 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 59957 ccggcggcggcggcagcggcggcggcggcggcg 59989
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 62943 gggcggcggcggcgacgacga 62963
>emb|CR615715.1| full-length cDNA clone CS0DG004YH03 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1765 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 391 cggcggcggcggcagcggtggcggcggcg 419
>emb|CR615628.1| full-length cDNA clone CS0DJ003YE13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1723 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 364 cggcggcggcggcagcggtggcggcggcg 392
>emb|CR608921.1| full-length cDNA clone CS0DI058YO22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1551 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 204 cggcggcggcggcagcggtggcggcggcg 232
>emb|CR603954.1| full-length cDNA clone CS0DE014YD02 of Placenta of Homo sapiens (human) Length = 1741 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 391 cggcggcggcggcagcggtggcggcggcg 419
>emb|CR592999.1| full-length cDNA clone CS0DI063YN24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1635 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 393 cggcggcggcggcagcggtggcggcggcg 421
>emb|CR592850.1| full-length cDNA clone CS0DM013YH10 of Fetal liver of Homo sapiens (human) Length = 1759 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcg 121 |||||||||| |||||| ||||||||||| Sbjct: 393 cggcggcggcggcagcggtggcggcggcg 421
>gb|AF287292.1|AF287292 Drosophila melanogaster Disco-related protein mRNA, partial cds Length = 2940 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 92 ccggcggcggctgcagcgatggcggcggcggcg 124 ||||||||||| |||||| ||||||||||||| Sbjct: 1996 ccggcggcggcagcagcggcggcggcggcggcg 1964
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 110174 cgatggcggcggcggcgatga 110154
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 53217 cggcggcggcggcggcgacggcggcggcggcga 53249
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| || |||||||||||||||||| Sbjct: 102584 cggcggcggcggcgatggcggcggcggcg 102612
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| || |||||||||||||||||| Sbjct: 66988 cggcggcggcggcgatggcggcggcggcg 67016
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 3043 cgatggcggcggcggcgatga 3023
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 cagggggcggcggcggcgacgacga 264 |||| |||||||||||||||||||| Sbjct: 2327 caggcggcggcggcggcgacgacga 2351
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 65940 cggcggcggcggcggcgacggcggcggcggcga 65972
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 115451 cggcggcggcggcggcgacggcggcggcggcga 115483
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gcggctgcagcgatggcggcggcgg 122 |||||||||| |||||||||||||| Sbjct: 122348 gcggctgcagtgatggcggcggcgg 122372
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 cagggggcggcggcggcgacgacga 264 |||| |||||||||||||||||||| Sbjct: 112381 caggcggcggcggcggcgacgacga 112405
>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0455A11 Length = 158629 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 ggggcggcggcggcgacgacg 263 ||||||||||||||||||||| Sbjct: 100026 ggggcggcggcggcgacgacg 100006
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 138709 gggcggcggcggcgacgacga 138729
>dbj|AK121517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027B16, full insert sequence Length = 5193 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 ggcggctgcagcgatggcggcggcg 121 ||||||||| ||||||||||||||| Sbjct: 97 ggcggctgcggcgatggcggcggcg 121
>ref|XM_954147.1| Neurospora crassa OR74A hypothetical protein (NCU06893.1) partial mRNA Length = 2178 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cttcgactccgacgacgacga 171 ||||||||||||||||||||| Sbjct: 1452 cttcgactccgacgacgacga 1472
>ref|XM_951372.1| Neurospora crassa OR74A hypothetical protein (NCU03356.1) partial mRNA Length = 1824 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gcggcggctgcagcgatggcggcgg 119 |||||||| |||||||||||||||| Sbjct: 1240 gcggcggcggcagcgatggcggcgg 1264
>ref|XM_950890.1| Neurospora crassa OR74A hypothetical protein (NCU04543.1) partial mRNA Length = 933 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gggggcggcggcggcgacgac 262 ||||||||||||||||||||| Sbjct: 753 gggggcggcggcggcgacgac 773
>ref|XM_568934.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB04370) partial mRNA Length = 4524 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 gacgacgacgatctcatggac 181 ||||||||||||||||||||| Sbjct: 436 gacgacgacgatctcatggac 456
>dbj|AK109545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E05, full insert sequence Length = 3015 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gcagcgatggcggcggcggcg 124 ||||||||||||||||||||| Sbjct: 779 gcagcgatggcggcggcggcg 799
>dbj|AK107931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A02, full insert sequence Length = 641 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 180 cgatggcggcggcggcgatga 200
>dbj|AK107493.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D04, full insert sequence Length = 1617 Score = 42.1 bits (21), Expect = 3.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 93 cggcggcggctgcagcgatggcggcggcggcgatgaa 129 ||||||||| ||| ||| |||||||||||||||||| Sbjct: 105 cggcggcggatgctgcggcggcggcggcggcgatgaa 141
>dbj|AK107389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C10, full insert sequence Length = 1494 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||| ||| || ||||||||||||||||||| Sbjct: 847 cggcggtggcagcggcgatggcggcggcggcga 815
>dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G05, full insert sequence Length = 1680 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gctgcagcgatggcggcggcggcga 125 ||||||||| ||||||||||||||| Sbjct: 603 gctgcagcggtggcggcggcggcga 627
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgatggcggcggcggcgatga 128 ||||||||||||||||||||| Sbjct: 1216 cgatggcggcggcggcgatga 1196
>gb|AC006121.1|AC006121 Homo sapiens chromosome X, clone hCIT.200_L_4, complete sequence Length = 183461 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcggctgcagcgatggcggcggcggcg 124 ||||||| |||||| |||||||||||||| Sbjct: 149028 cggcggcagcagcggtggcggcggcggcg 149056
>dbj|AK069237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B07, full insert sequence Length = 1800 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 cggcggcggctgcagcgatggcggcggcggcga 125 |||||||||| || |||| |||||||||||||| Sbjct: 92 cggcggcggcggcggcgacggcggcggcggcga 60
>dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B04, full insert sequence Length = 1087 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 gctgcagcgatggcggcggcggcga 125 ||||||||| ||||||||||||||| Sbjct: 712 gctgcagcggtggcggcggcggcga 688
>ref|NM_001013345.1| Danio rerio zgc:110525 (zgc:110525), mRNA gb|BC090261.1| Danio rerio zgc:110525, mRNA (cDNA clone MGC:110525 IMAGE:6897836), complete cds Length = 910 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 495 tcaagaacttgcatttgaatttgga 519 |||||||||||||||| |||||||| Sbjct: 321 tcaagaacttgcatttaaatttgga 345
>ref|XM_311472.2| Anopheles gambiae str. PEST ENSANGP00000013669 (ENSANGG00000011180), partial mRNA Length = 2493 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 664 caaacagagaaatactcggaa 684 ||||||||||||||||||||| Sbjct: 137 caaacagagaaatactcggaa 117
>ref|XM_311350.2| Anopheles gambiae str. PEST ENSANGP00000021363 (ENSANGG00000018874), mRNA Length = 1228 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 1102 gggcggcggcggcgacgacga 1082
>emb|AJ335082.1|HSA335082 Homo sapiens genomic sequence surrounding NotI site, clone NL1-YA14C Length = 690 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gggcggcggcggcgacgacga 264 ||||||||||||||||||||| Sbjct: 177 gggcggcggcggcgacgacga 157 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 158,751,168 Number of extensions: 9384549 Number of successful extensions: 282167 Number of sequences better than 10.0: 265 Number of HSP's gapped: 282136 Number of HSP's successfully gapped: 326 Length of query: 1037 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1014 Effective length of database: 18,503,978,556 Effective search space: 18763034255784 Effective search space used: 18763034255784 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
