>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
          Length = 791
 Score =  186 bits (473), Expect = 3e-46
 Identities = 116/452 (25%), Positives = 226/452 (50%)
 Frame = +1

Query: 334  VVSRTREMRGLIDAKKPHQAQDLFGHLADEGHRPSXXXXXXXXXXXXNQRAFEAIPSLLA 513
            VVS T  + G        +A   +  + D G  P               +A +    +L 
Sbjct: 196  VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 514  GMDAAGLRPDAIFFNALINSFVEARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGI 693
             M   G+ PD + +N++++ +  + +  EA     KM     G  P + T++ L+     
Sbjct: 256  TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM--RSDGVEPDVVTYSLLMDYLCK 313

Query: 694  AGRPDESQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRM 873
             GR  E+++IFD M               ++P +TTY  L++ +     L E  G++  M
Sbjct: 314  NGRCMEARKIFDSMTKRG-----------LKPEITTYGTLLQGYATKGALVEMHGLLDLM 362

Query: 874  RARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGRL 1053
               G+ PD   ++ +  AYAK  +  +A  +  +M +  L  +  T+G ++G  C+ GR+
Sbjct: 363  VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 1054 EEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQ 1233
            E+A+    QM D G+ P  IV+N+L+ G    N    A++++  M   GI  + + ++  
Sbjct: 423  EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 1234 LNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGV 1413
            +++    G + +  K+F+ MV  G++P+   Y+ L  G+  A +  +A +LL  M  +G+
Sbjct: 483  IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 1414 RPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEE 1593
            +PN VT++T+I+G+C ++ M++A  ++++M  +GV P++ T+  ++ G  + ++   A+E
Sbjct: 543  KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 1594 VLQMMQEAGIRPKQSTYSLVADAWKAVGLVKN 1689
            +   + E+G + + STY+++       GL KN
Sbjct: 603  LYVRITESGTQIELSTYNIILH-----GLCKN 629



 Score =  167 bits (424), Expect = 1e-40
 Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 35/428 (8%)
 Frame = +1

Query: 475  NQRAFEAIPSLLAGMDAAGLRPDAIFFNALINSFVEARRMGEATSTFWKMSRHHPGCRPT 654
            +Q A E +  ++A     G  PD + +  +IN F +     +A ST+ +M     G  P 
Sbjct: 174  SQEALELL-HMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--GILPD 230

Query: 655  ISTFNTLIKGFGIAGRPDESQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDH 834
            + T+N++I     A   D++  + + M           V + V P+  TYN ++  +C  
Sbjct: 231  VVTYNSIIAALCKAQAMDKAMEVLNTM-----------VKNGVMPDCMTYNSILHGYCSS 279

Query: 835  RRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTW 1014
             + +EA G + +MR+ GVEPDVVTY+ +     KN     A ++   M +  L+    T+
Sbjct: 280  GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339

Query: 1015 GIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEH 1194
            G ++ GY  +G L E    +  M   G+ P+  VF+ L+  +        A  V   M  
Sbjct: 340  GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399

Query: 1195 FGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKG--------- 1347
             G+ P+ VTY   +      G +      F++M++ G+ P   VY+ L  G         
Sbjct: 400  QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459

Query: 1348 --------------------------HVRAQQPGKAEELLERMCRLGVRPNVVTFTTVIS 1449
                                      H +  +  ++E+L E M R+GV+PNV+T+ T+I+
Sbjct: 460  AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLIN 519

Query: 1450 GWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRP 1629
            G+C    MD A ++   M   G++PN  T+ TLI GY +  +   A  + + M+ +G+ P
Sbjct: 520  GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579

Query: 1630 KQSTYSLV 1653
               TY+++
Sbjct: 580  DIITYNII 587



 Score =  157 bits (398), Expect = 1e-37
 Identities = 112/445 (25%), Positives = 207/445 (46%), Gaps = 35/445 (7%)
 Frame = +1

Query: 490  EAIPSLLAGMDAAGLRPDAIFFNALINSFVEARRMGEATSTFWKMSRHHPGCRPTISTFN 669
            EAI   L  M + G+ PD + ++ L++   +  R  EA   F  M++   G +P I+T+ 
Sbjct: 284  EAI-GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR--GLKPEITTYG 340

Query: 670  TLIKGFGIAGRPDESQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDHRRLEE 849
            TL++G+   G   E   + D+M           V + + P+   ++IL+ A+    ++++
Sbjct: 341  TLLQGYATKGALVEMHGLLDLM-----------VRNGIHPDHYVFSILICAYAKQGKVDQ 389

Query: 850  AWGVVGRMRARGVEPDVVTYNTVASAYAKNDET--------------------------- 948
            A  V  +MR +G+ P+ VTY  V     K+                              
Sbjct: 390  AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 949  -------W-RAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLP 1104
                   W RAEEL++EM+   +  +   +  I+  +C+EGR+ E+ +    M   GV P
Sbjct: 450  GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509

Query: 1105 NVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVF 1284
            NVI +NTL+ G+  A     A  +L  M   G+KP+ VTYS  +N +  +  M     +F
Sbjct: 510  NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569

Query: 1285 DKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSV 1464
             +M  +G+ PD   Y+I+ +G  + ++   A+EL  R+   G +  + T+  ++ G C  
Sbjct: 570  KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629

Query: 1465 ADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTY 1644
               D+A ++++ +    ++   RTF  +I    +  +  +A+++       G+ P   TY
Sbjct: 630  KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689

Query: 1645 SLVADAWKAVGLVKNANRTVGSPDD 1719
             L+A+     GL++  ++   S +D
Sbjct: 690  RLMAENIIGQGLLEELDQLFLSMED 714



 Score =  154 bits (390), Expect = 1e-36
 Identities = 99/365 (27%), Positives = 173/365 (47%)
 Frame = +1

Query: 529  GLRPDAIFFNALINSFVEARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPD 708
            G R DAI F  L+      +R  +A     +      GC P + ++N L+KG     R  
Sbjct: 117  GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL-GCIPNVFSYNILLKGLCDENRSQ 175

Query: 709  ESQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGV 888
            E+  +  MMA                P++ +Y  ++  +      ++A+     M  RG+
Sbjct: 176  EALELLHMMADDRGGGSP--------PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI 227

Query: 889  EPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALR 1068
             PDVVTYN++ +A  K     +A E++  MV+  +     T+  I+ GYC  G+ +EA+ 
Sbjct: 228  LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287

Query: 1069 CVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFS 1248
             +++M+  GV P+V+ ++ L+           A  +   M   G+KP+I TY   L  ++
Sbjct: 288  FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347

Query: 1249 SLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVV 1428
            + G + +   + D MV  GI PD  V+SIL   + +  +  +A  +  +M + G+ PN V
Sbjct: 348  TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407

Query: 1429 TFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMM 1608
            T+  VI   C    +++A   + +M D G+ P    + +LI G     +  +AEE++  M
Sbjct: 408  TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467

Query: 1609 QEAGI 1623
             + GI
Sbjct: 468  LDRGI 472



 Score =  137 bits (344), Expect = 2e-31
 Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 4/311 (1%)
 Frame = +1

Query: 772  ASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETW 951
            A  V P+L TY IL+   C   RL+  +  +G +  +G   D + +  +      +  T 
Sbjct: 80   ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139

Query: 952  RAEELVV-EMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKD---AGVLPNVIVF 1119
             A ++V+  M       +  ++ I++ G C E R +EAL  +  M D    G  P+V+ +
Sbjct: 140  DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 1120 NTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVE 1299
             T++ GF    D+  A      M   GI PD+VTY+  + A      M K  +V + MV+
Sbjct: 200  TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 1300 AGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDN 1479
             G+ PD   Y+ +  G+  + QP +A   L++M   GV P+VVT++ ++   C       
Sbjct: 260  NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 1480 ATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVAD 1659
            A +++  M   G++P + T+ TL+ GY+ +    +   +L +M   GI P    +S++  
Sbjct: 320  ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 1660 AWKAVGLVKNA 1692
            A+   G V  A
Sbjct: 380  AYAKQGKVDQA 390



 Score =  132 bits (333), Expect = 5e-30
 Identities = 88/411 (21%), Positives = 181/411 (44%)
 Frame = +1

Query: 388  QAQDLFGHLADEGHRPSXXXXXXXXXXXXNQRAFEAIPSLLAGMDAAGLRPDAIFFNALI 567
            +A+ +F  +   G +P              + A   +  LL  M   G+ PD   F+ LI
Sbjct: 319  EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 568  NSFVEARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPDESQRIFDMMAXXX 747
             ++ +  ++ +A   F KM +   G  P   T+  +I     +GR +++   F+ M    
Sbjct: 379  CAYAKQGKVDQAMLVFSKMRQQ--GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM---- 432

Query: 748  XXXXXXXVASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASA 927
                   +   + P    YN L+   C   + E A  ++  M  RG+  + + +N++  +
Sbjct: 433  -------IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485

Query: 928  YAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPN 1107
            + K      +E+L   MVR  ++ +  T+  ++ GYC  G+++EA++ +  M   G+ PN
Sbjct: 486  HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN 545

Query: 1108 VIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFD 1287
             + ++TL+ G+   +    A  +   ME  G+ PDI+TY+  L         A   +++ 
Sbjct: 546  TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605

Query: 1288 KMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVA 1467
            ++ E+G + +   Y+I+  G  + +    A ++ + +C + ++    TF  +I     V 
Sbjct: 606  RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665

Query: 1468 DMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAG 1620
              D A  ++      G+ PN  T+  +      Q    + +++   M++ G
Sbjct: 666  RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716



 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 68/294 (23%), Positives = 116/294 (39%), Gaps = 24/294 (8%)
 Frame = +1

Query: 403  FGHLADEGHRPSXXXXXXXXXXXXNQRAFEAIPSLLAGMDAAGLRPDAIFFNALINSFVE 582
            F  + DEG  P                 +E    L+  M   G+  + IFFN++I+S  +
Sbjct: 429  FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488

Query: 583  ARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPDESQRIFDMMAXXXXXXXX 762
              R+ E+   F  M R   G +P + T+NTLI G+ +AG+ DE+ ++   M         
Sbjct: 489  EGRVIESEKLFELMVRI--GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 763  XXVA------------------------STVRPNLTTYNILVKAWCDHRRLEEAWGVVGR 870
               +                        S V P++ TYNI+++     RR   A  +  R
Sbjct: 547  VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 871  MRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGR 1050
            +   G + ++ TYN +     KN  T  A ++   +    L+   RT+ I++    + GR
Sbjct: 607  ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 1051 LEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPD 1212
             +EA          G++PN   +  + +  +        D +   ME  G   D
Sbjct: 667  NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720



 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 2/236 (0%)
 Frame = +1

Query: 505  LLAGMDAAGLRPDAIFFNALINSFVEARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKG 684
            LL+GM + GL+P+ + ++ LIN + +  RM +A   F +M     G  P I T+N +++G
Sbjct: 533  LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS--GVSPDIITYNIILQG 590

Query: 685  FGIAGRPDESQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDHRRLEEAWGVV 864
                 R   ++ ++  +             S  +  L+TYNI++   C ++  ++A  + 
Sbjct: 591  LFQTRRTAAAKELYVRITE-----------SGTQIELSTYNIILHGLCKNKLTDDALQMF 639

Query: 865  GRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCRE 1044
              +    ++ +  T+N +  A  K      A++L V      L  +  T+ ++      +
Sbjct: 640  QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699

Query: 1045 GRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLME--HFGIK 1206
            G LEE  +    M+D G   +  + N +++  L   +   A   L +++  HF ++
Sbjct: 700  GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

>P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 463

 Score =  103 bits (257), Expect = 3e-21
 Identities = 87/370 (23%), Positives = 149/370 (40%)
 Frame = +1

Query: 412  LADEGHRPSXXXXXXXXXXXXNQRAFEAIPSLLAGMDAAGLRPDAIFFNALINSFVEARR 591
            + D G RP              +   + +  L   M   G+ PD   +N L+  + +  +
Sbjct: 74   MRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGK 133

Query: 592  MGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPDESQRIFDMMAXXXXXXXXXXV 771
              EA    +K      G  P   T+N L+      G  D +  +F  M            
Sbjct: 134  HEEAFRVLYK-DLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQ----------- 181

Query: 772  ASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETW 951
             S  +P L TYNIL+   C  RR+  A  ++  ++  G  P+ VTY T+   Y K     
Sbjct: 182  -SRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIR 240

Query: 952  RAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLL 1131
            R  +L +EM R         +  +V    + GR +EA   ++++   G   +++ +NTLL
Sbjct: 241  RGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLL 300

Query: 1132 KGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIE 1311
              +    +  A DD+LG +E  G+K D  T++  +N     G   +  + F  M E GI 
Sbjct: 301  NLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIG 360

Query: 1312 PDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRV 1491
             +    + L  G  +A    +A    E M       +  T+T+V+   C       A+++
Sbjct: 361  LNLVTCNCLVDGLCKAGHVDRAMRYFESM----EVKDEYTYTSVVHNLCKDMRFVCASKL 416

Query: 1492 YRKMRDAGVR 1521
                 + G++
Sbjct: 417  LLSCYNKGIK 426



 Score =  101 bits (252), Expect = 1e-20
 Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 4/300 (1%)
 Frame = +1

Query: 805  NILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVR 984
            NI V + C  R+LE+A  ++      GV+PDVVTYNT                       
Sbjct: 17   NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNT----------------------- 53

Query: 985  ARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAA 1164
                        ++ GYCR   +EEA    R+M+DAG+ P+V  +N+L+ G   A     
Sbjct: 54   ------------LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAG---AARRLM 98

Query: 1165 ADDVLGL---MEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVE-AGIEPDPQVYS 1332
             D VL L   M  +GI PD+ +Y+  +  +  LG   +  +V  K ++ AG+ P P  Y+
Sbjct: 99   LDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYN 158

Query: 1333 ILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDA 1512
            +L     +      A EL + M +   +P ++T+  +I+G C    +  A  +  +++ +
Sbjct: 159  VLLDALCKCGYIDNALELFKEM-QSRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKS 217

Query: 1513 GVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADAWKAVGLVKNA 1692
            G  PN  T+ T++  Y + ++  +  ++   M+  G       Y  V  A    G  K A
Sbjct: 218  GYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEA 277



 Score =  101 bits (251), Expect = 1e-20
 Identities = 87/388 (22%), Positives = 171/388 (44%), Gaps = 7/388 (1%)
 Frame = +1

Query: 556  NALINSFVEARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGF----GIAGRPDESQRI 723
            N  ++S  + R++ +A S      R   G  P + T+NTLI G+    GI      ++R+
Sbjct: 17   NICVDSLCKFRKLEKAESLIIDGIRL--GVDPDVVTYNTLISGYCRFVGIEEAYAVTRRM 74

Query: 724  FDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVV 903
             D               + +RP++ TYN L+        L+    +   M   G+ PD+ 
Sbjct: 75   RD---------------AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLW 119

Query: 904  TYNTVASAY---AKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCV 1074
            +YNT+   Y    K++E +R   L  ++  A L     T+ +++   C+ G ++ AL   
Sbjct: 120  SYNTLMCCYFKLGKHEEAFRV--LYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELF 177

Query: 1075 RQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSL 1254
            ++M+ +   P ++ +N L+ G   +     A  +L  ++  G  P+ VTY+  L  +   
Sbjct: 178  KEMQ-SRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKT 236

Query: 1255 GHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTF 1434
              + +  ++F +M   G   D   Y  +    ++  +  +A E ++ + R G R ++V++
Sbjct: 237  RRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSY 296

Query: 1435 TTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQE 1614
             T+++ +    ++D    +  ++   G++ +  T   ++ G     Q  +AEE    M E
Sbjct: 297  NTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGE 356

Query: 1615 AGIRPKQSTYSLVADAWKAVGLVKNANR 1698
             GI     T + + D     G V  A R
Sbjct: 357  MGIGLNLVTCNCLVDGLCKAGHVDRAMR 384



 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
 Frame = +1

Query: 1000 SERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVL 1179
            S R   I V   C+  +LE+A   +      GV P+V+ +NTL+ G+        A  V 
Sbjct: 12   STRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVT 71

Query: 1180 GLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRA 1359
              M   GI+PD+ TY+  +   +    +     +FD+M+E GI PD   Y+ L   + + 
Sbjct: 72   RRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKL 131

Query: 1360 QQPGKAEELLERMCRL-GVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRT 1536
             +  +A  +L +  +L G+ P   T+  ++   C    +DNA  ++++M+ +  +P L T
Sbjct: 132  GKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQ-SRFKPELMT 190

Query: 1537 FETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLV 1653
            +  LI G  + ++   A+ +L  ++++G  P   TY+ +
Sbjct: 191  YNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTI 229



 Score = 68.9 bits (167), Expect = 8e-11
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 36/156 (23%)
 Frame = +1

Query: 1372 KAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLI 1551
            KAE L+    RLGV P+VVT+ T+ISG+C    ++ A  V R+MRDAG+RP++ T+ +LI
Sbjct: 31   KAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLI 90

Query: 1552 WGYS------------EQKQPW--------------------KAEEVLQM----MQEAGI 1623
             G +            ++   W                    K EE  ++    +Q AG+
Sbjct: 91   AGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGL 150

Query: 1624 RPKQSTYSLVADAWKAVGLVKNANRTVGSPDDRRRP 1731
             P   TY+++ DA    G + NA         R +P
Sbjct: 151  NPGPDTYNVLLDALCKCGYIDNALELFKEMQSRFKP 186

>P42704:LPPRC_HUMAN 130 kDa leucine-rich protein - Homo sapiens (Human)|
          Length = 1273

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 47/187 (25%), Positives = 84/187 (44%)
 Frame = +1

Query: 1006 RTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGL 1185
            R+ G ++     E R E A R    ++  G + +V  +N LLK +L      +  D L  
Sbjct: 7    RSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAK 66

Query: 1186 MEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQ 1365
            ME   I+P+ VTY   + ++ ++G +   SK+   M    +     V+S L  GH RA  
Sbjct: 67   MEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGD 126

Query: 1366 PGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFET 1545
               AE +L  M   G+ P   T+  +++ +    D+D+  +   K+    +    R    
Sbjct: 127  MENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQ 186

Query: 1546 LIWGYSE 1566
            +I+ +S+
Sbjct: 187  IIFSFSK 193



 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 34/143 (23%), Positives = 74/143 (51%)
 Frame = +1

Query: 1276 KVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGW 1455
            +++D + + G   D   Y+ L K +++ +      + L +M    ++PN VT+  +I+ +
Sbjct: 27   RIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASY 86

Query: 1456 CSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQ 1635
            C+V D++ A+++   M+   +      F  L+ G++       AE +L +M++AGI P  
Sbjct: 87   CNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGP 146

Query: 1636 STYSLVADAWKAVGLVKNANRTV 1704
             TY  + +A+   G + +  +T+
Sbjct: 147  DTYLALLNAYAEKGDIDHVKQTL 169



 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 39/152 (25%), Positives = 72/152 (47%)
 Frame = +1

Query: 838  RLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWG 1017
            R E A  +   ++  G   DV  YN +   Y +N+  +   + + +M  A ++ +  T+ 
Sbjct: 21   RTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ 80

Query: 1018 IIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHF 1197
             ++  YC  G +E A + +  MK   +     VF+ L+ G   A D   A+++L +M   
Sbjct: 81   RLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDA 140

Query: 1198 GIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKM 1293
            GI+P   TY   LNA++  G +    +  +K+
Sbjct: 141  GIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172



 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 65/320 (20%), Positives = 125/320 (39%), Gaps = 34/320 (10%)
 Frame = +1

Query: 790  NLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELV 969
            +++ YN L+K +  +         + +M    ++P+ VTY  + ++Y    +   A +++
Sbjct: 40   DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKIL 99

Query: 970  VEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDA 1149
              M    L  +E  +  +V G+ R G +E A   +  M+DAG+ P    +  LL  + + 
Sbjct: 100  GFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 159

Query: 1150 NDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSK----------------- 1278
             D       L  +E F +          + +FS  G+++   K                 
Sbjct: 160  GDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFWKKFTCERRYIPDAMN 219

Query: 1279 -----VFDKMVEAGI----------EPDPQVYSILAKGH-VRAQQP-GKAEELLERMCRL 1407
                 V +K+ +  +          E  P V+      H V    P  K  +  +++  +
Sbjct: 220  LILLLVTEKLEDVALQILLACPVSKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEV 279

Query: 1408 GVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKA 1587
             +    + FT   +   +  D+  A     K     +RP+   F  L+ G  ++K     
Sbjct: 280  QMHSFPLQFTLHCALLANKTDLAKALMKAVKEEGFPIRPHY--FWPLLVGRRKEKNVQGI 337

Query: 1588 EEVLQMMQEAGIRPKQSTYS 1647
             E+L+ MQE G+ P Q TY+
Sbjct: 338  IEILKGMQELGVHPDQETYT 357



 Score = 33.9 bits (76), Expect = 2.9
 Identities = 17/76 (22%), Positives = 40/76 (52%)
 Frame = +1

Query: 1480 ATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVAD 1659
            A R++  ++  G   ++  +  L+  Y + +  +   + L  M+EA I+P + TY  +  
Sbjct: 25   AHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIA 84

Query: 1660 AWKAVGLVKNANRTVG 1707
            ++  VG ++ A++ +G
Sbjct: 85   SYCNVGDIEGASKILG 100

>Q8C2E4:PTCD1_MOUSE Pentatricopeptide repeat protein 1 - Mus musculus (Mouse)|
          Length = 695

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
 Frame = +1

Query: 1201 IKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAE 1380
            + P +V++         L  M        KM E G++PD +  ++LA+      +PG A 
Sbjct: 446  LSPAVVSFGTVATPADRLALMGGLEGFLGKMTEHGLQPDIKTLTLLAE----VVEPGSAA 501

Query: 1381 E--LLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIW 1554
            E  LL  + R  V  +V  F T+I     + D++ A  +   +   G+ PNLRTF  L  
Sbjct: 502  ESSLLSVLDRHRVEADVTFFNTLIRKKSKLGDLEGAKALLPILAKKGIVPNLRTFCNLAI 561

Query: 1555 GYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADA 1662
            G     +P    ++L  M+++ + P    YS + +A
Sbjct: 562  GC---HRPRDGMQLLADMKKSQVSPNIHIYSTLINA 594



 Score = 45.1 bits (105), Expect = 0.001
 Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
 Frame = +1

Query: 1201 IKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGK-- 1374
            ++P    Y+  +     +G++ K  ++F+ M +  +EP    Y+ L   +V A+ P K  
Sbjct: 167  LQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLEPSDATYTALF--NVCAESPWKDS 224

Query: 1375 ----AEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFE 1542
                A +L +++     + N+ T+  ++      AD+     V++++   G      TF 
Sbjct: 225  ALQSALKLRQQLQARNFQLNLKTYHALLKVAAKCADLRLCLDVFKEIIQRGHAVTEETFC 284

Query: 1543 TLIWGYSEQKQPW--KAEEVLQMMQEAGIRPKQSTYSLVADAWKAVGL 1680
             L+ G  + K+    +A +V + M   GI+P +  Y+L+ +A +  GL
Sbjct: 285  FLLVGCIQDKKTGFRQAMQVWRQMLSLGIKPSRHGYNLLLEAARDCGL 332



 Score = 35.4 bits (80), Expect = 1.0
 Identities = 30/129 (23%), Positives = 53/129 (41%)
 Frame = +1

Query: 856  GVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGY 1035
            G +G+M   G++PD+ T   +A              L+  + R R+      +  ++   
Sbjct: 471  GFLGKMTEHGLQPDIKTLTLLAEVVEPGSAA--ESSLLSVLDRHRVEADVTFFNTLIRKK 528

Query: 1036 CREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDI 1215
             + G LE A   +  +   G++PN+  F  L  G     D      +L  M+   + P+I
Sbjct: 529  SKLGDLEGAKALLPILAKKGIVPNLRTFCNLAIGCHRPRD---GMQLLADMKKSQVSPNI 585

Query: 1216 VTYSHQLNA 1242
              YS  +NA
Sbjct: 586  HIYSTLINA 594

>Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 1261

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 7/188 (3%)
 Frame = +1

Query: 1081 MKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEH---FGIKPDIVTYSHQLNAFSS 1251
            MK  G +P    F  L+       DT  A   L + E      +KP +  Y+  L+    
Sbjct: 879  MKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGR 938

Query: 1252 LGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERM-CRLGVRPNVV 1428
                 +C K+F +M E+G+ P    Y  +     R      AE+L   M  +   +P V 
Sbjct: 939  ARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVA 998

Query: 1429 TFTTVISGWC-SVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQK--QPWKAEEVL 1599
             + T+I     ++ + + A   Y ++    + P+  T++ L+  Y   K       + VL
Sbjct: 999  PYNTMIQFEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVL 1058

Query: 1600 QMMQEAGI 1623
            ++M+   +
Sbjct: 1059 ELMERTDV 1066



 Score = 48.9 bits (115), Expect = 9e-05
 Identities = 60/308 (19%), Positives = 121/308 (39%), Gaps = 17/308 (5%)
 Frame = +1

Query: 532  LRPDAIFFNALINSFVEARRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPDE 711
            ++P    +NA+++    ARR  E    F +M     G  PT  T+ T+I      G    
Sbjct: 922  VKPSVFLYNAVLSKLGRARRTTECWKLFQEMKES--GLLPTSVTYGTVINAACRIGDESL 979

Query: 712  SQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAWCDHR-RLEEAWGVVGRMRARGV 888
            ++++F  M                +P +  YN +++         E+A     R+ A  +
Sbjct: 980  AEKLFAEMENQP----------NYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDI 1029

Query: 889  EPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERT-----------WGIIVGGY 1035
            EP   TY  +  AY         + + V  V+A L   ERT           +  I+G  
Sbjct: 1030 EPSSHTYKLLMDAYG------TLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNV 1083

Query: 1036 CREGRLEEALRCVRQ---MKDAGVLP-NVIVFNTLLKGFLDANDTAAADDVLGLMEHFGI 1203
              +  ++ A  C        DAG +  +  +F + ++  +  +       ++  M+ + +
Sbjct: 1084 VSD--VQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNV 1141

Query: 1204 KPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIE-PDPQVYSILAKGHVRAQQPGKAE 1380
              +    +  +  F+ +G ++K    FD +   G+   +P  Y  + + ++      KA 
Sbjct: 1142 SLNAYIVNALIKGFTKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGRKAM 1201

Query: 1381 ELLERMCR 1404
            E++E++ R
Sbjct: 1202 EIVEQLKR 1209



 Score = 45.8 bits (107), Expect = 7e-04
 Identities = 84/393 (21%), Positives = 146/393 (37%), Gaps = 15/393 (3%)
 Frame = +1

Query: 478  QRAFEAIPSLLAGMDAAGLRPD----AIFFNALINSFVEARRMGEATSTFWKMSRHHPGC 645
            QR FE    L   +    L       A+  +A+I S   AR+    +S  +  +    G 
Sbjct: 827  QRVFEHSKHLYRKISTKSLEKANWFMALILDAMILSSSFARQF--KSSNLFCDNMKMLGY 884

Query: 646  RPTISTFNTLIKGFGIAGRPDESQRIFDMMAXXXXXXXXXXVASTVRPNLTTYNILVKAW 825
             P  STF  LI      G  D++    ++                V+P++  YN ++   
Sbjct: 885  IPRASTFAHLINNSTRRGDTDDATTALNIFEETKRH--------NVKPSVFLYNAVLSKL 936

Query: 826  CDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRA---RLR 996
               RR  E W +   M+  G+ P  VTY TV +A  +  +   AE+L  EM      + R
Sbjct: 937  GRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPR 996

Query: 997  TSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLK--GFLDANDTAAAD 1170
             +     I         R E+AL    ++    + P+   +  L+   G L   +  +  
Sbjct: 997  VAPYNTMIQFEVQTMFNR-EKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVK 1055

Query: 1171 DVLGLMEHFGI---KPDIVTYSHQL-NAFSSLGHMAKCSKVFDKMVEAG-IEPDPQVYSI 1335
             VL LME   +         Y H L N  S +     C        +AG I+ D  ++  
Sbjct: 1056 AVLELMERTDVPILSMHYAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLFQS 1115

Query: 1336 LAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAG 1515
              +  +   +  +  +++  M R  V  N      +I G+  V  +  A   +  +   G
Sbjct: 1116 QIESLIANDRIVEGIQIVSDMKRYNVSLNAYIVNALIKGFTKVGMISKARYYFDLLECEG 1175

Query: 1516 VR-PNLRTFETLIWGYSEQKQPWKAEEVLQMMQ 1611
            +      T+E ++  Y       KA E+++ ++
Sbjct: 1176 MSGKEPSTYENMVRAYLSVNDGRKAMEIVEQLK 1208



 Score = 38.9 bits (89), Expect = 0.091
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1357 AQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNAT---RVYRKMRDAGVRPN 1527
            A+Q   +    + M  LG  P   TF  +I+      D D+AT    ++ + +   V+P+
Sbjct: 866  ARQFKSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPS 925

Query: 1528 LRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADAWKAVG 1677
            +  +  ++      ++  +  ++ Q M+E+G+ P   TY  V +A   +G
Sbjct: 926  VFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIG 975

>O75127:PTCD1_HUMAN Pentatricopeptide repeat protein 1 - Homo sapiens (Human)|
          Length = 700

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
 Frame = +1

Query: 988  RLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDAN-DTAA 1164
            RL+  E  + +++GG  R G L++A     QMK   + P+   +  L     ++    +A
Sbjct: 168  RLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSA 227

Query: 1165 ADDVLGLMEHFGIKP---DIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSI 1335
                L L +    K    ++ TY   L   +    +  C  VF +++  G     + +S 
Sbjct: 228  LQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSF 287

Query: 1336 LAKGHVRAQQPG--KAEELLERMCRLGVRPNVVTFT--TVISGWCSVADMDNATRVYRKM 1503
            L  G ++ ++ G   A ++   M  LG++P+  ++    V +  C + D   A+ +  K 
Sbjct: 288  LLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKP 347

Query: 1504 RD 1509
            R+
Sbjct: 348  RE 349



 Score = 38.5 bits (88), Expect = 0.12
 Identities = 35/162 (21%), Positives = 71/162 (43%)
 Frame = +1

Query: 1177 LGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVR 1356
            + L+    + P +V++         L  +        KM E   +PD +  ++LA+  V 
Sbjct: 440  VNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEV-VE 498

Query: 1357 AQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRT 1536
            +  P ++  LL  +    V  ++  F T++     + D++ A  +   +   G+ PNL+T
Sbjct: 499  SGSPAESL-LLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQT 557

Query: 1537 FETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADA 1662
            F  L  G     +P    ++L  M+++ + P    YS + +A
Sbjct: 558  FCNLAIGC---HRPKDGLQLLTDMKKSQVTPNTHIYSALINA 596

>Q5R655:PTCD1_PONPY Pentatricopeptide repeat protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 698

 Score = 42.0 bits (97), Expect = 0.011
 Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
 Frame = +1

Query: 988  RLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDAN-DTAA 1164
            RL+  E  +  ++GG  R G L++A     QMK   + P+   +  L     ++    +A
Sbjct: 166  RLQPMESNYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALFNVCAESPWKDSA 225

Query: 1165 ADDVLGLMEHFGIKP---DIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSI 1335
                L L +    K    ++ TY   L   +    +  C  VF +++  G     + +S 
Sbjct: 226  LQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSF 285

Query: 1336 LAKGHVRAQQPG--KAEELLERMCRLGVRPNVVTFT--TVISGWCSVADMDNATRVYRKM 1503
            L  G ++ ++ G   A ++   M  LG++P+  ++    V +  C + D   A+ +  K 
Sbjct: 286  LLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKP 345

Query: 1504 RD 1509
            R+
Sbjct: 346  RE 347



 Score = 38.9 bits (89), Expect = 0.091
 Identities = 35/162 (21%), Positives = 71/162 (43%)
 Frame = +1

Query: 1177 LGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVR 1356
            + L+    + P +V++         L  +        KM E   +PD +  ++LA+  V 
Sbjct: 438  VNLLTPGAVPPTVVSFGTVTTPADRLALVGGLEGFLSKMAEHRQQPDIRTLTLLAEV-VE 496

Query: 1357 AQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRT 1536
            +  P ++  LL  +    V  ++  F T++     + D++ A  +   +   G+ PNL+T
Sbjct: 497  SGSPAESL-LLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQT 555

Query: 1537 FETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADA 1662
            F  L  G     +P    ++L  M+++ + P    YS + +A
Sbjct: 556  FCNLAIGC---HRPKDGLQLLTDMKKSQVTPNSHIYSALINA 594

>Q8BKF1:RPOM_MOUSE DNA-directed RNA polymerase, mitochondrial precursor - Mus musculus|
            (Mouse)
          Length = 1207

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
 Frame = +1

Query: 1288 KMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVT---FTTVISGWC 1458
            K VEA I    Q +    +  V   Q   A  +L      G R  V+T   + TV+ GW 
Sbjct: 185  KAVEAQILVLQQKFLAFFECCVCTGQVPLAHHVLVTHHNNGDRQQVLTLHMYNTVMLGWA 244

Query: 1459 SVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKA-EEVLQMMQEAGIRPKQ 1635
                      V+  ++DAG+ P+L ++   +     + Q  +  +  L+ M E G +P+ 
Sbjct: 245  RKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQRCLKQMMEEGFQPQL 304

Query: 1636 STYSLVADAWKAVGLVK 1686
                LV +      L++
Sbjct: 305  LFTDLVLEEEDRAALLR 321

>P0A2P0:RHLB_SALTY ATP-dependent RNA helicase rhlB - Salmonella typhimurium|
          Length = 421

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N +  +E E  Q  G   +      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           D++GHLA +GHR
Sbjct: 271 DIWGHLAADGHR 282

>P0A2P1:RHLB_SALTI ATP-dependent RNA helicase rhlB - Salmonella typhi|
          Length = 421

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N +  +E E  Q  G   +      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           D++GHLA +GHR
Sbjct: 271 DIWGHLAADGHR 282

>Q9UVX1:PLB3_CANAL Lysophospholipase 3 precursor - Candida albicans (Yeast)|
          Length = 754

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +1

Query: 121 ASYSSVT--------TMLENGTQLTPASTSNSTGKTGNNGEGLNGSASMEEEKRQGNGGD 276
           AS SSV+        T    GT  T   TS +TG + N G    GS+S  ++K   NGGD
Sbjct: 673 ASVSSVSGISGLAAKTHTSGGTSSTTQQTSTTTGSSANGGSSSTGSSSSSKKK---NGGD 729

>P48237:YG3M_YEAST Uncharacterized protein YGR150C - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 864

 Score = 34.3 bits (77), Expect = 2.2
 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1408 GVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVR--PNLRTFETLIWGYSEQKQPW 1581
            G+ PN    TTVI  +        A   +  M+    +  P++ T+ T++    +++   
Sbjct: 315  GITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFP 374

Query: 1582 KAEEVLQMMQEAGIRPKQSTYSLVA 1656
            KA ++ Q +Q+  I+P  +TY ++A
Sbjct: 375  KALDLFQEIQDHNIKPTTNTYIMMA 399



 Score = 32.3 bits (72), Expect = 8.5
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1087 DAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIK--PDIVTYSHQLNAFSSLGH 1260
            D G+ PN     T+++ +     T  A +    M+    K  PDI TY+  L       +
Sbjct: 313  DYGITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERN 372

Query: 1261 MAKCSKVFDKMVEAGIEPDPQVYSILAK 1344
              K   +F ++ +  I+P    Y ++A+
Sbjct: 373  FPKALDLFQEIQDHNIKPTTNTYIMMAR 400

>Q8GWA9:Y2033_ARATH Putative PPR-repeat protein At2g17033 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 505

 Score = 34.3 bits (77), Expect = 2.2
 Identities = 15/63 (23%), Positives = 37/63 (58%)
 Frame = +1

Query: 1372 KAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLI 1551
            +  E+++R   + V+     + +++SG C++    +A RV  +MR   ++P L  +++++
Sbjct: 229  RLREIIQRSSSVYVKTQA--YKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVL 286

Query: 1552 WGY 1560
            +GY
Sbjct: 287  YGY 289



 Score = 34.3 bits (77), Expect = 2.2
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 1321 QVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRK 1500
            Q Y  +  G     QP  AE ++E M    ++P +  + +V+ G+  +   D+  RV  +
Sbjct: 245  QAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVLYGYGRLGLFDDMNRVVHR 304

Query: 1501 MRDAG 1515
            M   G
Sbjct: 305  MGTEG 309

>Q9H3Q1:BORG4_HUMAN Cdc42 effector protein 4 - Homo sapiens (Human)|
          Length = 356

 Score = 33.9 bits (76), Expect = 2.9
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 151 ENGTQLTPASTSNSTGKTGNNGEGLNGSASMEE--EKRQGNGGDAQPPP 291
           E GT   P S S+S  K  N+GEG +  A  EE   +R G  G   P P
Sbjct: 129 EKGTSKLPKSLSSSPVKKANDGEGGDEEAGTEEAVPRRNGAAGPHSPDP 177

>Q6CIF3:AEP3_KLULA ATPase expression protein 3 - Kluyveromyces lactis (Yeast) (Candida|
            sphaerica)
          Length = 593

 Score = 33.5 bits (75), Expect = 3.8
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
 Frame = +1

Query: 1210 DIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVR-----AQQPGK 1374
            D++ Y    N F      A C +++ +M   GI P+ Q Y+++ +  +R      QQ   
Sbjct: 218  DVIYYYGNKNNF------ATCRELYAQMKSEGIAPNVQTYNLMLRNLLRNSRLIKQQLPY 271

Query: 1375 AEEL--LERMCRLGVRPNVVTFTTVISGWCSVADMDNATRV--YRKMRDAGV 1518
             E +  LERM +  +  +V+T+ T     C     DN +R     KM + GV
Sbjct: 272  REAIFYLERMKKENISADVITWNT-----CYFLLKDNISRAIFLEKMVERGV 318

>P0A8K0:RHLB_SHIFL ATP-dependent RNA helicase rhlB - Shigella flexneri|
          Length = 421

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N +  +E E  Q  G   +      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           +++GHLA +GHR
Sbjct: 271 EIWGHLAADGHR 282

>P0A8J8:RHLB_ECOLI ATP-dependent RNA helicase rhlB - Escherichia coli|
          Length = 421

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N +  +E E  Q  G   +      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           +++GHLA +GHR
Sbjct: 271 EIWGHLAADGHR 282

>P0A8J9:RHLB_ECOL6 ATP-dependent RNA helicase rhlB - Escherichia coli O6|
          Length = 421

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N +  +E E  Q  G   +      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           +++GHLA +GHR
Sbjct: 271 EIWGHLAADGHR 282

>Q8XAT4:RHLB_ECO57 ATP-dependent RNA helicase rhlB - Escherichia coli O157:H7|
          Length = 421

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N +  +E E  Q  G   +      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           +++GHLA +GHR
Sbjct: 271 EIWGHLAADGHR 282

>P29465:CHS3_YEAST Chitin synthase 3 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 1165

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +1

Query: 1054 EEALRCVRQMKDAGVLPN-----VIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPD-I 1215
            EE LR           PN     ++V + L+KG    ND    +  LG+M+ F   PD +
Sbjct: 665  EEGLRTTLDSLSTTDYPNSHKLLMVVCDGLIKG--SGNDKTTPEIALGMMDDFVTPPDEV 722

Query: 1216 VTYSHQLNAFSSLGH-MAKCSKVFDKMVEAGIEPDPQ 1323
              YS+   A  S  H MAK    F K  ++ I P+ Q
Sbjct: 723  KPYSYVAVASGSKRHNMAKIYAGFYKYDDSTIPPENQ 759

>Q8BXX2:ZN509_MOUSE Zinc finger protein 509 - Mus musculus (Mouse)|
          Length = 756

 Score = 32.3 bits (72), Expect = 8.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 214 GEGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKP 384
           G+   GS  +    R   G      P +C  C+K  T  AV+ R + M G  DA+ P
Sbjct: 532 GKCFGGSGDLRRHVRTHTG----EKPYSCEVCSKCFTRSAVLRRHKRMHGRADARSP 584

>Q6LLL5:RHLB_PHOPR ATP-dependent RNA helicase rhlB - Photobacterium profundum|
           (Photobacterium sp. (strain SS9))
          Length = 437

 Score = 32.3 bits (72), Expect = 8.5
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +1

Query: 217 EGLNGSASMEEEKRQGNGGDAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQ 396
           E +N   S+  E  Q  G   Q      +   K    Q ++      R +I A   H+ +
Sbjct: 211 EHMNSPESVVVEPNQKTGHLIQEELFYPSNQEKMRLLQTLIEEEWPDRAIIFANTKHRCE 270

Query: 397 DLFGHLADEGHR 432
           D++GHLA + HR
Sbjct: 271 DIWGHLAADNHR 282

>P05691:CSP_PLAFL Circumsporozoite protein - Plasmodium falciparum (isolate le5)|
          Length = 315

 Score = 32.3 bits (72), Expect = 8.5
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +1

Query: 151 ENGTQLTPASTSNSTGKTGNNGEGLNGSASMEEEKRQGNGGD 276
           EN   L   S S      GNN  G NG    +E+KR GN  D
Sbjct: 44  ENWYSLKKNSRSLGENDDGNNNNGDNGREGKDEDKRDGNNED 85

>P02893:CSP_PLAFA Circumsporozoite protein precursor - Plasmodium falciparum|
          Length = 412

 Score = 32.3 bits (72), Expect = 8.5
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +1

Query: 151 ENGTQLTPASTSNSTGKTGNNGEGLNGSASMEEEKRQGNGGD 276
           EN   L   S S      GNN  G NG    +E+KR GN  D
Sbjct: 60  ENWYSLKKNSRSLGENDDGNNNNGDNGREGKDEDKRDGNNED 101


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 300,973,006
Number of extensions: 6203755
Number of successful extensions: 21592
Number of sequences better than 10.0: 24
Number of HSP's gapped: 21487
Number of HSP's successfully gapped: 57
Length of query: 737
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 616
Effective length of database: 67,496,744
Effective search space: 41577994304
Effective search space used: 41577994304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)