ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf91g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001049012.1| Oryza sativa (japonica cultivar-group) Os01g0228400 (Os01g0228400) mRNA, complete cds Length = 2449 Score = 991 bits (500), Expect = 0.0 Identities = 819/923 (88%), Gaps = 3/923 (0%) Strand = Plus / Plus Query: 779 cggtgaggccgaacctgaccacgtacaacatcctggtgaaggcctggtgcgaccaccgga 838 |||| |||||||||||||| |||||||||||||| || ||||| ||||||||| | ||| Sbjct: 946 cggtcaggccgaacctgacgacgtacaacatcctcgtcaaggcgtggtgcgacgccggga 1005 Query: 839 ggctggaggaggcgtggggcgtggtgggcaggatgcgggcgcgcggcgtggagcccgacg 898 ||||||||||||||||| | ||||||| |||||||| ||| |||| || || |||| Sbjct: 1006 ggctggaggaggcgtggcgggtggtggcgaggatgcgcgcgtcgggcgccgacccggacg 1065 Query: 899 tcgtcacctacaacaccgtcgccagcgcctacgccaagaacgacgagacgtggcgggcgg 958 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| || | Sbjct: 1066 tcgtcacgtacaacaccctcgccagcgcgtacgccaagaacgacgagacgtggcgcgccg 1125 Query: 959 aggagctcgtggtggagatggtgc-gc--gccaggctgcgcaccagcgagcgcacctggg 1015 |||||||||| |||||||||| || || || |||| |||||||||||||||||||||| Sbjct: 1126 aggagctcgtcgtggagatggcgcagcaggcagggctccgcaccagcgagcgcacctggg 1185 Query: 1016 gcatcatcgtcggcggatactgcagggagggcaggctggaggaggcgctccggtgcgtcc 1075 |||||||||||||||| |||||| | |||||| | || | ||||||||||| ||||||| Sbjct: 1186 gcatcatcgtcggcggctactgccgcgagggccgcctcggcgaggcgctccgctgcgtcc 1245 Query: 1076 gccagatgaaggacgccggcgtcctccctaacgtcatcgtcttcaacacccttctcaagg 1135 |||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 1246 gccagatgaaggactccggcgtgctccccaacgtcatcgtcttcaacaccctgctcaagg 1305 Query: 1136 gctttctcgacgccaacgacacggccgccgccgacgacgttctcgggctgatggagcact 1195 |||| |||||||||||||||| |||||||| |||||||||||| |||||||||||||| | Sbjct: 1306 gcttcctcgacgccaacgacatggccgccgtcgacgacgttcttgggctgatggagcagt 1365 Query: 1196 tcggcatcaagccggacatcgtgacgtacagccaccagctgaacgccttcagctcgctgg 1255 |||| |||||||||||||||||||| |||||||||||||||||||| | ||||| ||| Sbjct: 1366 tcgggatcaagccggacatcgtgacctacagccaccagctgaacgcgctgagctccatgg 1425 Query: 1256 ggcacatggcgaagtgcagcaaggtgttcgacaagatggtggaggctgggatcgagccgg 1315 |||||||||| ||||||| |||||||||||||| ||| | ||||| ||||||||||||| Sbjct: 1426 ggcacatggccaagtgcatgaaggtgttcgacaaaatgatcgaggccgggatcgagccgg 1485 Query: 1316 acccgcaggtgtacagcatcctcgccaagggccacgtgcgcgcgcagcagcccggcaagg 1375 |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| Sbjct: 1486 acccgcaggtgtacagcatcctcgccaagggctacgtgcgcgcgcagcagccggagaagg 1545 Query: 1376 cggaggagctcctggagcggatgtgccgcctcggcgtccgccccaacgtcgtcaccttca 1435 |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| Sbjct: 1546 cggaggagctcctgcgccagatgggccgcctcggcgtccgccccaacgtcgtcaccttca 1605 Query: 1436 ccaccgtcatcagcggctggtgcagcgtcgccgacatggacaacgccaccagggtgtaca 1495 |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 1606 ccaccgtcatcagcgggtggtgcagcgtcgccgacatgggcaacgccgtgagggtctacg 1665 Query: 1496 ggaagatgcgggacgccggcgtgcgcccaaacctcaggacgttcgagacgctcatctggg 1555 ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 1666 ccgccatgcgcgacgccggcgtgcgcccgaacctcaggacgttcgagaccctcatctggg 1725 Query: 1556 ggtacagcgagcagaagcagccgtggaaggccgaggaggtcctccagatgatgcaggagg 1615 | |||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1726 gctacagcgagctgaagcagccatggaaggccgaggaggtgctccagatgatgcaggacg 1785 Query: 1616 cgggcatcaggccgaagcagagcacctacagcctcgtcgccgatgcgtggaaggccgtcg 1675 | ||| || | || ||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct: 1786 ccggcgtccgccccaagcagaccacctactgcctcgtcgccgacgcgtggaaggccgtcg 1845 Query: 1676 gcctggtcaagaacgccaaccgc 1698 |||| ||| |||||||||||||| Sbjct: 1846 gcctcgtcgagaacgccaaccgc 1868 Score = 172 bits (87), Expect = 3e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 297 ctgcacgacgtgcgccaagggacacacgtgccaggcagtggtcagccggacgcgggagat 356 |||||||||||||| |||||| |||||||||||||| ||| || |||||||||| |||| Sbjct: 485 ctgcacgacgtgcggcaaggggcacacgtgccaggcggtgatcgcccggacgcggcagat 544 Query: 357 gcggggcctcatcgacgccaagaagcctcaccaggcgcaggacctcttcggtcacctcgc 416 ||| | | | |||||||| | || ||| ||||||||||| ||| | ||||||| Sbjct: 545 gcgcgccatgatcgacgcgaggaggccgcaccaggcgcactcggcgttccgccacctcgt 604 Query: 417 cgacgagggccaccgcccgtccttggtgacttacaccaccctgctcaccgcggtgacgaa 476 |||||| |||||||||||||| ||||||| |||||||| |||||| | ||| |||||| Sbjct: 605 cgacgacggccaccgcccgtcgctggtgacgtacaccacgctgctcgcggcgctgacgag 664 Query: 477 ccagcgcgccttcgaggcgatcccttcgctgctcgccggcatggacgccgccgggctgcg 536 |||||| || ||||| | ||||| | ||||||||||| |||| | |||||| || || Sbjct: 665 ccagcgggcgttcgacaccatcccgtggctgctcgccgaggtggaggacgccggcctccg 724 Query: 537 gccggacgccatcttcttcaacgccctcatcaactccttcgtggaggccaggcggatggg 596 |||||| |||||||||||||||| ||||||||| || |||| |||||| |||||||||| Sbjct: 725 cccggactccatcttcttcaacgcgctcatcaacgccctcgtcgaggcccggcggatggg 784 Query: 597 cgaggccaccagcaccttc 615 |||||| || | ||||||| Sbjct: 785 cgaggcgacgaacaccttc 803 Score = 85.7 bits (43), Expect = 6e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 640 ggctgccgccccactatcagcaccttcaacacgctcatcaagggcttcggcattgccggc 699 |||||||||||||| ||||| ||||||||||| |||||||||| |||||| |||||| Sbjct: 822 ggctgccgccccacggcgagcacgttcaacacgctgatcaagggctacggcatagccggc 881 Query: 700 cgccctgacgagtcgcagcgcatcttcgatatgatggcc 738 ||||| || ||||||||||| | ||||| ||||||||| Sbjct: 882 cgccccgaggagtcgcagcgggtgttcgacatgatggcc 920
>dbj|AK105248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A12, full insert sequence Length = 2448 Score = 991 bits (500), Expect = 0.0 Identities = 819/923 (88%), Gaps = 3/923 (0%) Strand = Plus / Plus Query: 779 cggtgaggccgaacctgaccacgtacaacatcctggtgaaggcctggtgcgaccaccgga 838 |||| |||||||||||||| |||||||||||||| || ||||| ||||||||| | ||| Sbjct: 945 cggtcaggccgaacctgacgacgtacaacatcctcgtcaaggcgtggtgcgacgccggga 1004 Query: 839 ggctggaggaggcgtggggcgtggtgggcaggatgcgggcgcgcggcgtggagcccgacg 898 ||||||||||||||||| | ||||||| |||||||| ||| |||| || || |||| Sbjct: 1005 ggctggaggaggcgtggcgggtggtggcgaggatgcgcgcgtcgggcgccgacccggacg 1064 Query: 899 tcgtcacctacaacaccgtcgccagcgcctacgccaagaacgacgagacgtggcgggcgg 958 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| || | Sbjct: 1065 tcgtcacgtacaacaccctcgccagcgcatacgccaagaacgacgagacgtggcgcgccg 1124 Query: 959 aggagctcgtggtggagatggtgc-gc--gccaggctgcgcaccagcgagcgcacctggg 1015 |||||||||| |||||||||| || || || |||| |||||||||||||||||||||| Sbjct: 1125 aggagctcgtcgtggagatggcgcagcaggcagggctccgcaccagcgagcgcacctggg 1184 Query: 1016 gcatcatcgtcggcggatactgcagggagggcaggctggaggaggcgctccggtgcgtcc 1075 |||||||||||||||| |||||| | |||||| | || | ||||||||||| ||||||| Sbjct: 1185 gcatcatcgtcggcggctactgccgcgagggccgcctcggcgaggcgctccgctgcgtcc 1244 Query: 1076 gccagatgaaggacgccggcgtcctccctaacgtcatcgtcttcaacacccttctcaagg 1135 |||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 1245 gccagatgaaggactccggcgtgctccccaacgtcatcgtcttcaacaccctgctcaagg 1304 Query: 1136 gctttctcgacgccaacgacacggccgccgccgacgacgttctcgggctgatggagcact 1195 |||| |||||||||||||||| |||||||| |||||||||||| |||||||||||||| | Sbjct: 1305 gcttcctcgacgccaacgacatggccgccgtcgacgacgttcttgggctgatggagcagt 1364 Query: 1196 tcggcatcaagccggacatcgtgacgtacagccaccagctgaacgccttcagctcgctgg 1255 |||| |||||||||||||||||||| |||||||||||||||||||| | ||||| ||| Sbjct: 1365 tcgggatcaagccggacatcgtgacctacagccaccagctgaacgcgctgagctccatgg 1424 Query: 1256 ggcacatggcgaagtgcagcaaggtgttcgacaagatggtggaggctgggatcgagccgg 1315 |||||||||| ||||||| |||||||||||||| ||| | ||||| ||||||||||||| Sbjct: 1425 ggcacatggccaagtgcatgaaggtgttcgacaaaatgatcgaggccgggatcgagccgg 1484 Query: 1316 acccgcaggtgtacagcatcctcgccaagggccacgtgcgcgcgcagcagcccggcaagg 1375 |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| Sbjct: 1485 acccgcaggtgtacagcatcctcgccaagggctacgtgcgcgcgcagcagccggagaagg 1544 Query: 1376 cggaggagctcctggagcggatgtgccgcctcggcgtccgccccaacgtcgtcaccttca 1435 |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| Sbjct: 1545 cggaggagctcctgcgccagatgggccgcctcggcgtccgccccaacgtcgtcaccttca 1604 Query: 1436 ccaccgtcatcagcggctggtgcagcgtcgccgacatggacaacgccaccagggtgtaca 1495 |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 1605 ccaccgtcatcagcgggtggtgcagcgtcgccgacatgggcaacgccgtgagggtctacg 1664 Query: 1496 ggaagatgcgggacgccggcgtgcgcccaaacctcaggacgttcgagacgctcatctggg 1555 ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 1665 ccgccatgcgcgacgccggcgtgcgcccgaacctcaggacgttcgagaccctcatctggg 1724 Query: 1556 ggtacagcgagcagaagcagccgtggaaggccgaggaggtcctccagatgatgcaggagg 1615 | |||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1725 gctacagcgagctgaagcagccatggaaggccgaggaggtgctccagatgatgcaggacg 1784 Query: 1616 cgggcatcaggccgaagcagagcacctacagcctcgtcgccgatgcgtggaaggccgtcg 1675 | ||| || | || ||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct: 1785 ccggcgtccgccccaagcagaccacctactgcctcgtcgccgacgcgtggaaggccgtcg 1844 Query: 1676 gcctggtcaagaacgccaaccgc 1698 |||| ||| |||||||||||||| Sbjct: 1845 gcctcgtcgagaacgccaaccgc 1867 Score = 172 bits (87), Expect = 3e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 297 ctgcacgacgtgcgccaagggacacacgtgccaggcagtggtcagccggacgcgggagat 356 |||||||||||||| |||||| |||||||||||||| ||| || |||||||||| |||| Sbjct: 484 ctgcacgacgtgcggcaaggggcacacgtgccaggcggtgatcgcccggacgcggcagat 543 Query: 357 gcggggcctcatcgacgccaagaagcctcaccaggcgcaggacctcttcggtcacctcgc 416 ||| | | | |||||||| | || ||| ||||||||||| ||| | ||||||| Sbjct: 544 gcgcgccatgatcgacgcgaggaggccgcaccaggcgcactcggcgttccgccacctcgt 603 Query: 417 cgacgagggccaccgcccgtccttggtgacttacaccaccctgctcaccgcggtgacgaa 476 |||||| |||||||||||||| ||||||| |||||||| |||||| | ||| |||||| Sbjct: 604 cgacgacggccaccgcccgtcgctggtgacgtacaccacgctgctcgcggcgctgacgag 663 Query: 477 ccagcgcgccttcgaggcgatcccttcgctgctcgccggcatggacgccgccgggctgcg 536 |||||| || ||||| | ||||| | ||||||||||| |||| | |||||| || || Sbjct: 664 ccagcgggcgttcgacaccatcccgtggctgctcgccgaggtggaggacgccggcctccg 723 Query: 537 gccggacgccatcttcttcaacgccctcatcaactccttcgtggaggccaggcggatggg 596 |||||| |||||||||||||||| ||||||||| || |||| |||||| |||||||||| Sbjct: 724 cccggactccatcttcttcaacgcgctcatcaacgccctcgtcgaggcccggcggatggg 783 Query: 597 cgaggccaccagcaccttc 615 |||||| || | ||||||| Sbjct: 784 cgaggcgacgaacaccttc 802 Score = 85.7 bits (43), Expect = 6e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 640 ggctgccgccccactatcagcaccttcaacacgctcatcaagggcttcggcattgccggc 699 |||||||||||||| ||||| ||||||||||| |||||||||| |||||| |||||| Sbjct: 821 ggctgccgccccacggcgagcacgttcaacacgctgatcaagggctacggcatagccggc 880 Query: 700 cgccctgacgagtcgcagcgcatcttcgatatgatggcc 738 ||||| || ||||||||||| | ||||| ||||||||| Sbjct: 881 cgccccgaggagtcgcagcgggtgttcgacatgatggcc 919
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 605 bits (305), Expect = e-169 Identities = 470/525 (89%) Strand = Plus / Plus Query: 1174 gttctcgggctgatggagcacttcggcatcaagccggacatcgtgacgtacagccaccag 1233 ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 7093210 gttcttgggctgatggagcagttcgggatcaagccggacatcgtgacctacagccaccag 7093269 Query: 1234 ctgaacgccttcagctcgctggggcacatggcgaagtgcagcaaggtgttcgacaagatg 1293 |||||||| | ||||| ||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 7093270 ctgaacgcgctgagctccatggggcacatggccaagtgcatgaaggtgttcgacaaaatg 7093329 Query: 1294 gtggaggctgggatcgagccggacccgcaggtgtacagcatcctcgccaagggccacgtg 1353 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7093330 atcgaggccgggatcgagccggacccgcaggtgtacagcatcctcgccaagggctacgtg 7093389 Query: 1354 cgcgcgcagcagcccggcaaggcggaggagctcctggagcggatgtgccgcctcggcgtc 1413 |||||||||||||| | |||||||||||||||||| | |||| |||||||||||||| Sbjct: 7093390 cgcgcgcagcagccggagaaggcggaggagctcctgcgccagatgggccgcctcggcgtc 7093449 Query: 1414 cgccccaacgtcgtcaccttcaccaccgtcatcagcggctggtgcagcgtcgccgacatg 1473 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 7093450 cgccccaacgtcgtcaccttcaccaccgtcatcagcgggtggtgcagcgtcgccgacatg 7093509 Query: 1474 gacaacgccaccagggtgtacaggaagatgcgggacgccggcgtgcgcccaaacctcagg 1533 | ||||||| ||||| ||| ||||| ||||||||||||||||| ||||||||| Sbjct: 7093510 ggcaacgccgtgagggtctacgccgccatgcgcgacgccggcgtgcgcccgaacctcagg 7093569 Query: 1534 acgttcgagacgctcatctgggggtacagcgagcagaagcagccgtggaaggccgaggag 1593 ||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 7093570 acgttcgagaccctcatctggggctacagcgagctgaagcagccatggaaggccgaggag 7093629 Query: 1594 gtcctccagatgatgcaggaggcgggcatcaggccgaagcagagcacctacagcctcgtc 1653 || ||||||||||||||||| || ||| || | || ||||||| ||||||| |||||||| Sbjct: 7093630 gtgctccagatgatgcaggacgccggcgtccgccccaagcagaccacctactgcctcgtc 7093689 Query: 1654 gccgatgcgtggaaggccgtcggcctggtcaagaacgccaaccgc 1698 ||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 7093690 gccgacgcgtggaaggccgtcggcctcgtcgagaacgccaaccgc 7093734 Score = 391 bits (197), Expect = e-105 Identities = 351/400 (87%), Gaps = 3/400 (0%) Strand = Plus / Plus Query: 779 cggtgaggccgaacctgaccacgtacaacatcctggtgaaggcctggtgcgaccaccgga 838 |||| |||||||||||||| |||||||||||||| || ||||| ||||||||| | ||| Sbjct: 7092734 cggtcaggccgaacctgacgacgtacaacatcctcgtcaaggcgtggtgcgacgccggga 7092793 Query: 839 ggctggaggaggcgtggggcgtggtgggcaggatgcgggcgcgcggcgtggagcccgacg 898 ||||||||||||||||| | ||||||| |||||||| ||| |||| || || |||| Sbjct: 7092794 ggctggaggaggcgtggcgggtggtggcgaggatgcgcgcgtcgggcgccgacccggacg 7092853 Query: 899 tcgtcacctacaacaccgtcgccagcgcctacgccaagaacgacgagacgtggcgggcgg 958 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| || | Sbjct: 7092854 tcgtcacgtacaacaccctcgccagcgcgtacgccaagaacgacgagacgtggcgcgccg 7092913 Query: 959 aggagctcgtggtggagatggtgc-gc--gccaggctgcgcaccagcgagcgcacctggg 1015 |||||||||| |||||||||| || || || |||| |||||||||||||||||||||| Sbjct: 7092914 aggagctcgtcgtggagatggcgcagcaggcagggctccgcaccagcgagcgcacctggg 7092973 Query: 1016 gcatcatcgtcggcggatactgcagggagggcaggctggaggaggcgctccggtgcgtcc 1075 |||||||||||||||| |||||| | |||||| | || | ||||||||||| ||||||| Sbjct: 7092974 gcatcatcgtcggcggctactgccgcgagggccgcctcggcgaggcgctccgctgcgtcc 7093033 Query: 1076 gccagatgaaggacgccggcgtcctccctaacgtcatcgtcttcaacacccttctcaagg 1135 |||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 7093034 gccagatgaaggactccggcgtgctccccaacgtcatcgtcttcaacaccctgctcaagg 7093093 Query: 1136 gctttctcgacgccaacgacacggccgccgccgacgacgt 1175 |||| |||||||||||||||| |||||||| ||||||||| Sbjct: 7093094 gcttcctcgacgccaacgacatggccgccgtcgacgacgt 7093133 Score = 172 bits (87), Expect = 3e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 297 ctgcacgacgtgcgccaagggacacacgtgccaggcagtggtcagccggacgcgggagat 356 |||||||||||||| |||||| |||||||||||||| ||| || |||||||||| |||| Sbjct: 7092273 ctgcacgacgtgcggcaaggggcacacgtgccaggcggtgatcgcccggacgcggcagat 7092332 Query: 357 gcggggcctcatcgacgccaagaagcctcaccaggcgcaggacctcttcggtcacctcgc 416 ||| | | | |||||||| | || ||| ||||||||||| ||| | ||||||| Sbjct: 7092333 gcgcgccatgatcgacgcgaggaggccgcaccaggcgcactcggcgttccgccacctcgt 7092392 Query: 417 cgacgagggccaccgcccgtccttggtgacttacaccaccctgctcaccgcggtgacgaa 476 |||||| |||||||||||||| ||||||| |||||||| |||||| | ||| |||||| Sbjct: 7092393 cgacgacggccaccgcccgtcgctggtgacgtacaccacgctgctcgcggcgctgacgag 7092452 Query: 477 ccagcgcgccttcgaggcgatcccttcgctgctcgccggcatggacgccgccgggctgcg 536 |||||| || ||||| | ||||| | ||||||||||| |||| | |||||| || || Sbjct: 7092453 ccagcgggcgttcgacaccatcccgtggctgctcgccgaggtggaggacgccggcctccg 7092512 Query: 537 gccggacgccatcttcttcaacgccctcatcaactccttcgtggaggccaggcggatggg 596 |||||| |||||||||||||||| ||||||||| || |||| |||||| |||||||||| Sbjct: 7092513 cccggactccatcttcttcaacgcgctcatcaacgccctcgtcgaggcccggcggatggg 7092572 Query: 597 cgaggccaccagcaccttc 615 |||||| || | ||||||| Sbjct: 7092573 cgaggcgacgaacaccttc 7092591 Score = 85.7 bits (43), Expect = 6e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 640 ggctgccgccccactatcagcaccttcaacacgctcatcaagggcttcggcattgccggc 699 |||||||||||||| ||||| ||||||||||| |||||||||| |||||| |||||| Sbjct: 7092610 ggctgccgccccacggcgagcacgttcaacacgctgatcaagggctacggcatagccggc 7092669 Query: 700 cgccctgacgagtcgcagcgcatcttcgatatgatggcc 738 ||||| || ||||||||||| | ||||| ||||||||| Sbjct: 7092670 cgccccgaggagtcgcagcgggtgttcgacatgatggcc 7092708 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 738 cggcggtgacggcgacggcgac 759 |||||||||||||||||||||| Sbjct: 31955322 cggcggtgacggcgacggcgac 31955343 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 741 cggtgacggcgacggcgaccg 761 ||||||||||||||||||||| Sbjct: 8959962 cggtgacggcgacggcgaccg 8959982
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 605 bits (305), Expect = e-169 Identities = 470/525 (89%) Strand = Plus / Plus Query: 1174 gttctcgggctgatggagcacttcggcatcaagccggacatcgtgacgtacagccaccag 1233 ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 80790 gttcttgggctgatggagcagttcgggatcaagccggacatcgtgacctacagccaccag 80849 Query: 1234 ctgaacgccttcagctcgctggggcacatggcgaagtgcagcaaggtgttcgacaagatg 1293 |||||||| | ||||| ||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 80850 ctgaacgcgctgagctccatggggcacatggccaagtgcatgaaggtgttcgacaaaatg 80909 Query: 1294 gtggaggctgggatcgagccggacccgcaggtgtacagcatcctcgccaagggccacgtg 1353 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 80910 atcgaggccgggatcgagccggacccgcaggtgtacagcatcctcgccaagggctacgtg 80969 Query: 1354 cgcgcgcagcagcccggcaaggcggaggagctcctggagcggatgtgccgcctcggcgtc 1413 |||||||||||||| | |||||||||||||||||| | |||| |||||||||||||| Sbjct: 80970 cgcgcgcagcagccggagaaggcggaggagctcctgcgccagatgggccgcctcggcgtc 81029 Query: 1414 cgccccaacgtcgtcaccttcaccaccgtcatcagcggctggtgcagcgtcgccgacatg 1473 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 81030 cgccccaacgtcgtcaccttcaccaccgtcatcagcgggtggtgcagcgtcgccgacatg 81089 Query: 1474 gacaacgccaccagggtgtacaggaagatgcgggacgccggcgtgcgcccaaacctcagg 1533 | ||||||| ||||| ||| ||||| ||||||||||||||||| ||||||||| Sbjct: 81090 ggcaacgccgtgagggtctacgccgccatgcgcgacgccggcgtgcgcccgaacctcagg 81149 Query: 1534 acgttcgagacgctcatctgggggtacagcgagcagaagcagccgtggaaggccgaggag 1593 ||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 81150 acgttcgagaccctcatctggggctacagcgagctgaagcagccatggaaggccgaggag 81209 Query: 1594 gtcctccagatgatgcaggaggcgggcatcaggccgaagcagagcacctacagcctcgtc 1653 || ||||||||||||||||| || ||| || | || ||||||| ||||||| |||||||| Sbjct: 81210 gtgctccagatgatgcaggacgccggcgtccgccccaagcagaccacctactgcctcgtc 81269 Query: 1654 gccgatgcgtggaaggccgtcggcctggtcaagaacgccaaccgc 1698 ||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 81270 gccgacgcgtggaaggccgtcggcctcgtcgagaacgccaaccgc 81314 Score = 391 bits (197), Expect = e-105 Identities = 351/400 (87%), Gaps = 3/400 (0%) Strand = Plus / Plus Query: 779 cggtgaggccgaacctgaccacgtacaacatcctggtgaaggcctggtgcgaccaccgga 838 |||| |||||||||||||| |||||||||||||| || ||||| ||||||||| | ||| Sbjct: 80314 cggtcaggccgaacctgacgacgtacaacatcctcgtcaaggcgtggtgcgacgccggga 80373 Query: 839 ggctggaggaggcgtggggcgtggtgggcaggatgcgggcgcgcggcgtggagcccgacg 898 ||||||||||||||||| | ||||||| |||||||| ||| |||| || || |||| Sbjct: 80374 ggctggaggaggcgtggcgggtggtggcgaggatgcgcgcgtcgggcgccgacccggacg 80433 Query: 899 tcgtcacctacaacaccgtcgccagcgcctacgccaagaacgacgagacgtggcgggcgg 958 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| || | Sbjct: 80434 tcgtcacgtacaacaccctcgccagcgcgtacgccaagaacgacgagacgtggcgcgccg 80493 Query: 959 aggagctcgtggtggagatggtgc-gc--gccaggctgcgcaccagcgagcgcacctggg 1015 |||||||||| |||||||||| || || || |||| |||||||||||||||||||||| Sbjct: 80494 aggagctcgtcgtggagatggcgcagcaggcagggctccgcaccagcgagcgcacctggg 80553 Query: 1016 gcatcatcgtcggcggatactgcagggagggcaggctggaggaggcgctccggtgcgtcc 1075 |||||||||||||||| |||||| | |||||| | || | ||||||||||| ||||||| Sbjct: 80554 gcatcatcgtcggcggctactgccgcgagggccgcctcggcgaggcgctccgctgcgtcc 80613 Query: 1076 gccagatgaaggacgccggcgtcctccctaacgtcatcgtcttcaacacccttctcaagg 1135 |||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 80614 gccagatgaaggactccggcgtgctccccaacgtcatcgtcttcaacaccctgctcaagg 80673 Query: 1136 gctttctcgacgccaacgacacggccgccgccgacgacgt 1175 |||| |||||||||||||||| |||||||| ||||||||| Sbjct: 80674 gcttcctcgacgccaacgacatggccgccgtcgacgacgt 80713 Score = 172 bits (87), Expect = 3e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 297 ctgcacgacgtgcgccaagggacacacgtgccaggcagtggtcagccggacgcgggagat 356 |||||||||||||| |||||| |||||||||||||| ||| || |||||||||| |||| Sbjct: 79853 ctgcacgacgtgcggcaaggggcacacgtgccaggcggtgatcgcccggacgcggcagat 79912 Query: 357 gcggggcctcatcgacgccaagaagcctcaccaggcgcaggacctcttcggtcacctcgc 416 ||| | | | |||||||| | || ||| ||||||||||| ||| | ||||||| Sbjct: 79913 gcgcgccatgatcgacgcgaggaggccgcaccaggcgcactcggcgttccgccacctcgt 79972 Query: 417 cgacgagggccaccgcccgtccttggtgacttacaccaccctgctcaccgcggtgacgaa 476 |||||| |||||||||||||| ||||||| |||||||| |||||| | ||| |||||| Sbjct: 79973 cgacgacggccaccgcccgtcgctggtgacgtacaccacgctgctcgcggcgctgacgag 80032 Query: 477 ccagcgcgccttcgaggcgatcccttcgctgctcgccggcatggacgccgccgggctgcg 536 |||||| || ||||| | ||||| | ||||||||||| |||| | |||||| || || Sbjct: 80033 ccagcgggcgttcgacaccatcccgtggctgctcgccgaggtggaggacgccggcctccg 80092 Query: 537 gccggacgccatcttcttcaacgccctcatcaactccttcgtggaggccaggcggatggg 596 |||||| |||||||||||||||| ||||||||| || |||| |||||| |||||||||| Sbjct: 80093 cccggactccatcttcttcaacgcgctcatcaacgccctcgtcgaggcccggcggatggg 80152 Query: 597 cgaggccaccagcaccttc 615 |||||| || | ||||||| Sbjct: 80153 cgaggcgacgaacaccttc 80171 Score = 85.7 bits (43), Expect = 6e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 640 ggctgccgccccactatcagcaccttcaacacgctcatcaagggcttcggcattgccggc 699 |||||||||||||| ||||| ||||||||||| |||||||||| |||||| |||||| Sbjct: 80190 ggctgccgccccacggcgagcacgttcaacacgctgatcaagggctacggcatagccggc 80249 Query: 700 cgccctgacgagtcgcagcgcatcttcgatatgatggcc 738 ||||| || ||||||||||| | ||||| ||||||||| Sbjct: 80250 cgccccgaggagtcgcagcgggtgttcgacatgatggcc 80288
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 738 cggcggtgacggcgacggcgaccgcga 764 ||||||||||||||||||||||||||| Sbjct: 18412818 cggcggtgacggcgacggcgaccgcga 18412792 Score = 46.1 bits (23), Expect = 0.54 Identities = 26/27 (96%) Strand = Plus / Minus Query: 739 ggcggtgacggcgacggcgaccgcgac 765 ||||| ||||||||||||||||||||| Sbjct: 18276525 ggcggcgacggcgacggcgaccgcgac 18276499
>dbj|AP006063.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O06 Length = 180769 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 738 cggcggtgacggcgacggcgaccgcga 764 ||||||||||||||||||||||||||| Sbjct: 98068 cggcggtgacggcgacggcgaccgcga 98042 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Minus Query: 738 cggcggtgacggcgacggcgaccgcgacag 767 |||||| ||||||||||||||||||||||| Sbjct: 117968 cggcggcgacggcgacggcgaccgcgacag 117939 Score = 46.1 bits (23), Expect = 0.54 Identities = 26/27 (96%) Strand = Plus / Minus Query: 739 ggcggtgacggcgacggcgaccgcgac 765 ||||| ||||||||||||||||||||| Sbjct: 155906 ggcggcgacggcgacggcgaccgcgac 155880
>dbj|AP005932.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0597A07 Length = 149682 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 738 cggcggtgacggcgacggcgaccgcga 764 ||||||||||||||||||||||||||| Sbjct: 136978 cggcggtgacggcgacggcgaccgcga 136952 Score = 46.1 bits (23), Expect = 0.54 Identities = 26/27 (96%) Strand = Plus / Minus Query: 739 ggcggtgacggcgacggcgaccgcgac 765 ||||| ||||||||||||||||||||| Sbjct: 685 ggcggcgacggcgacggcgaccgcgac 659
>ref|NM_001052238.1| Oryza sativa (japonica cultivar-group) Os02g0119700 (Os02g0119700) mRNA, complete cds Length = 1312 Score = 52.0 bits (26), Expect = 0.009 Identities = 32/34 (94%) Strand = Plus / Plus Query: 882 cggcgtggagcccgacgtcgtcacctacaacacc 915 |||||| ||||||||| ||||||||||||||||| Sbjct: 669 cggcgtcgagcccgacctcgtcacctacaacacc 702
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 52.0 bits (26), Expect = 0.009 Identities = 32/34 (94%) Strand = Plus / Minus Query: 882 cggcgtggagcccgacgtcgtcacctacaacacc 915 |||||| ||||||||| ||||||||||||||||| Sbjct: 1039042 cggcgtcgagcccgacctcgtcacctacaacacc 1039009 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1117 ttcaacacccttctcaagggctttctcgacgccaac 1152 ||||||||||| |||| |||||||||||| |||||| Sbjct: 14235686 ttcaacaccctactcacgggctttctcgatgccaac 14235651 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 892 cccgacgtcgtcacctacaacacc 915 |||||||||||||||||||||||| Sbjct: 33725301 cccgacgtcgtcacctacaacacc 33725324 Score = 48.1 bits (24), Expect = 0.14 Identities = 39/44 (88%) Strand = Plus / Plus Query: 869 ggatgcgggcgcgcggcgtggagcccgacgtcgtcacctacaac 912 ||||||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 33725383 ggatgcgggaggccggggtggagcccgacgccgtcacctacaac 33725426
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 52.0 bits (26), Expect = 0.009 Identities = 32/34 (94%) Strand = Plus / Minus Query: 882 cggcgtggagcccgacgtcgtcacctacaacacc 915 |||||| ||||||||| ||||||||||||||||| Sbjct: 27750 cggcgtcgagcccgacctcgtcacctacaacacc 27717
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 52.0 bits (26), Expect = 0.009 Identities = 32/34 (94%) Strand = Plus / Minus Query: 882 cggcgtggagcccgacgtcgtcacctacaacacc 915 |||||| ||||||||| ||||||||||||||||| Sbjct: 110461 cggcgtcgagcccgacctcgtcacctacaacacc 110428
>dbj|AK108777.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-A01, full insert sequence Length = 1312 Score = 52.0 bits (26), Expect = 0.009 Identities = 32/34 (94%) Strand = Plus / Plus Query: 882 cggcgtggagcccgacgtcgtcacctacaacacc 915 |||||| ||||||||| ||||||||||||||||| Sbjct: 669 cggcgtcgagcccgacctcgtcacctacaacacc 702
>gb|DQ244273.1| Zea mays clone 4069 mRNA sequence Length = 842 Score = 50.1 bits (25), Expect = 0.035 Identities = 31/33 (93%) Strand = Plus / Minus Query: 735 ggccggcggtgacggcgacggcgaccgcgacag 767 ||||||||| ||||||||||||||| ||||||| Sbjct: 571 ggccggcggcgacggcgacggcgacggcgacag 539
>ref|NM_001054902.1| Oryza sativa (japonica cultivar-group) Os02g0793200 (Os02g0793200) mRNA, complete cds Length = 2092 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 892 cccgacgtcgtcacctacaacacc 915 |||||||||||||||||||||||| Sbjct: 293 cccgacgtcgtcacctacaacacc 316 Score = 48.1 bits (24), Expect = 0.14 Identities = 39/44 (88%) Strand = Plus / Plus Query: 869 ggatgcgggcgcgcggcgtggagcccgacgtcgtcacctacaac 912 ||||||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 375 ggatgcgggaggccggggtggagcccgacgccgtcacctacaac 418
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1619 gcatcaggccgaagcagagcacct 1642 |||||||||||||||||||||||| Sbjct: 750851 gcatcaggccgaagcagagcacct 750828
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 736 gccggcggtgacggcgacggcgaccgcg 763 |||||||||||||||||||||| ||||| Sbjct: 19585 gccggcggtgacggcgacggcgcccgcg 19558
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1350 cgtgcgcgcgcagcagcccggcaaggcg 1377 ||||||||||||||||| |||||||||| Sbjct: 716625 cgtgcgcgcgcagcagcgcggcaaggcg 716652
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1350 cgtgcgcgcgcagcagcccggcaaggcg 1377 ||||||||||||||||| |||||||||| Sbjct: 1239506 cgtgcgcgcgcagcagcgcggcaaggcg 1239533
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 276 cgcgcagccgccgccgagcacctgcacg 303 ||||| |||||||||||||||||||||| Sbjct: 7786089 cgcgctgccgccgccgagcacctgcacg 7786062 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 508 ctcgccggcatggacgccgccg 529 |||||||||||||||||||||| Sbjct: 3844048 ctcgccggcatggacgccgccg 3844027 Score = 42.1 bits (21), Expect = 8.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 504 gctgctcgccggcatggacgccgccgggctgcggccggacg 544 ||||| ||||| | |||||||||||||||| ||||| |||| Sbjct: 1909127 gctgcgcgccgccctggacgccgccgggctccggccagacg 1909087 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 738 cggcggtgacggcgacggcgaccgc 762 |||||||||||||||||||| |||| Sbjct: 4086434 cggcggtgacggcgacggcgtccgc 4086410
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1350 cgtgcgcgcgcagcagcccggcaaggcg 1377 ||||||||||||||||| |||||||||| Sbjct: 1142418 cgtgcgcgcgcagcagcgcggcaaggcg 1142445
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 892 cccgacgtcgtcacctacaacacc 915 |||||||||||||||||||||||| Sbjct: 93708 cccgacgtcgtcacctacaacacc 93731 Score = 48.1 bits (24), Expect = 0.14 Identities = 39/44 (88%) Strand = Plus / Plus Query: 869 ggatgcgggcgcgcggcgtggagcccgacgtcgtcacctacaac 912 ||||||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 93790 ggatgcgggaggccggggtggagcccgacgccgtcacctacaac 93833
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 892 cccgacgtcgtcacctacaacacc 915 |||||||||||||||||||||||| Sbjct: 56168 cccgacgtcgtcacctacaacacc 56191 Score = 48.1 bits (24), Expect = 0.14 Identities = 39/44 (88%) Strand = Plus / Plus Query: 869 ggatgcgggcgcgcggcgtggagcccgacgtcgtcacctacaac 912 ||||||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 56250 ggatgcgggaggccggggtggagcccgacgccgtcacctacaac 56293
>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_E02 Length = 125860 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1117 ttcaacacccttctcaagggctttctcgacgccaac 1152 ||||||||||| |||| |||||||||||| |||||| Sbjct: 40836 ttcaacaccctactcacgggctttctcgatgccaac 40801
>dbj|AK101158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027K13, full insert sequence Length = 2096 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 892 cccgacgtcgtcacctacaacacc 915 |||||||||||||||||||||||| Sbjct: 295 cccgacgtcgtcacctacaacacc 318 Score = 48.1 bits (24), Expect = 0.14 Identities = 39/44 (88%) Strand = Plus / Plus Query: 869 ggatgcgggcgcgcggcgtggagcccgacgtcgtcacctacaac 912 ||||||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 377 ggatgcgggaggccggggtggagcccgacgccgtcacctacaac 420
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 478 cagcgcgccttcgaggcgatccc 500 ||||||||||||||||||||||| Sbjct: 2189566 cagcgcgccttcgaggcgatccc 2189544 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 736 gccggcggtgacggcgacggc 756 ||||||||||||||||||||| Sbjct: 774754 gccggcggtgacggcgacggc 774734
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 734 tggccggcggtgacggcgacggc 756 ||||||||||||||||||||||| Sbjct: 2323921 tggccggcggtgacggcgacggc 2323943
>gb|EF068369.1| Plectrocnemia conspersa microsatellite Plc-57 sequence Length = 363 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 738 cggcggtgacggcgacggcgac 759 |||||||||||||||||||||| Sbjct: 86 cggcggtgacggcgacggcgac 107
>emb|CT833262.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN044L20, full insert sequence Length = 1096 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 130 tggccggcggcgacggcgacggcgac 105
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 869 ggatgcgggcgcgcggcgtgga 890 |||||||||||||||||||||| Sbjct: 6538698 ggatgcgggcgcgcggcgtgga 6538719
>ref|NM_001062967.1| Oryza sativa (japonica cultivar-group) Os05g0581600 (Os05g0581600) mRNA, complete cds Length = 1164 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 943 tggccggcggcgacggcgacggcgac 968
>ref|NM_001062966.1| Oryza sativa (japonica cultivar-group) Os05g0581700 (Os05g0581700) mRNA, complete cds Length = 1298 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 100 tggccggcggcgacggcgacggcgac 75
>ref|XM_520452.2| PREDICTED: Pan troglodytes NADPH oxidase activator 1 (NOXA1), mRNA Length = 2923 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 780 ggtgaggccgaacctgaccacg 801 |||||||||||||||||||||| Sbjct: 127 ggtgaggccgaacctgaccacg 148
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 738 cggcggtgacggcgacggcgaccgcg 763 |||||||||||||||||||| ||||| Sbjct: 5036998 cggcggtgacggcgacggcgcccgcg 5036973
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 140875 tggccggcggcgacggcgacggcgac 140850
>ref|XM_592867.2| PREDICTED: Bos taurus similar to zinc finger protein 287 (LOC514947), mRNA Length = 3290 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 940 gacgagacgtggcgggcggagg 961 |||||||||||||||||||||| Sbjct: 672 gacgagacgtggcgggcggagg 693
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 31796 tggccggcggcgacggcgacggcgac 31771
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1010 cctggggcatcatcgtcggcgg 1031 |||||||||||||||||||||| Sbjct: 225385 cctggggcatcatcgtcggcgg 225364
>gb|AC010335.8| Homo sapiens chromosome 19 clone CTD-3137H5, complete sequence Length = 137831 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 962 agctcgtggtggagatggtgcgcgcc 987 |||||||||||| ||||||||||||| Sbjct: 60950 agctcgtggtggcgatggtgcgcgcc 60975
>gb|AE012393.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 301 of 460 of the complete genome Length = 11733 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 975 gatggtgcgcgccaggctgcgc 996 |||||||||||||||||||||| Sbjct: 8820 gatggtgcgcgccaggctgcgc 8841
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 742 ggtgacggcgacggcgaccgcgacag 767 |||||||||||||||||| ||||||| Sbjct: 107441 ggtgacggcgacggcgacggcgacag 107466 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 74725 ggccggcggcgacggcgacggcgac 74701
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 28713083 tggccggcggcgacggcgacggcgac 28713058
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 742 ggtgacggcgacggcgaccgcgacag 767 |||||||||||||||||| ||||||| Sbjct: 7354080 ggtgacggcgacggcgacggcgacag 7354105 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 7321364 ggccggcggcgacggcgacggcgac 7321340 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 15219076 gacggcgacggcgaccgcgac 15219096
>emb|BX322799.22| Human DNA sequence from clone RP13-927H1 on chromosome 9, complete sequence Length = 143968 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 780 ggtgaggccgaacctgaccacg 801 |||||||||||||||||||||| Sbjct: 114054 ggtgaggccgaacctgaccacg 114075
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 738 cggcggtgacggcgacggcgac 759 |||||||||||||||||||||| Sbjct: 141400 cggcggtgacggcgacggcgac 141421
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 975 gatggtgcgcgccaggctgcgc 996 |||||||||||||||||||||| Sbjct: 1588898 gatggtgcgcgccaggctgcgc 1588877
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 736 gccggcggtgacggcgacggcg 757 |||||||||||||||||||||| Sbjct: 270164 gccggcggtgacggcgacggcg 270143
>dbj|AK110257.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-A09, full insert sequence Length = 1164 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 943 tggccggcggcgacggcgacggcgac 968
>dbj|AK108181.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A12, full insert sequence Length = 1297 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 734 tggccggcggtgacggcgacggcgac 759 |||||||||| ||||||||||||||| Sbjct: 100 tggccggcggcgacggcgacggcgac 75
>emb|AJ322880.1|HSA322880 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OD6R Length = 826 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 780 ggtgaggccgaacctgaccacg 801 |||||||||||||||||||||| Sbjct: 241 ggtgaggccgaacctgaccacg 220
>emb|AL359402.3|CNS05TEX Human chromosome 14 DNA sequence BAC C-2273N11 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 119296 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1039 agggagggcaggctggaggagg 1060 |||||||||||||||||||||| Sbjct: 109893 agggagggcaggctggaggagg 109872
>emb|AL352978.6|CNS05TBX Human chromosome 14 DNA sequence BAC C-3059L23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141450 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1039 agggagggcaggctggaggagg 1060 |||||||||||||||||||||| Sbjct: 30381 agggagggcaggctggaggagg 30360
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 738 cggcggtgacggcgacggcgac 759 |||||||||||||||||||||| Sbjct: 52049 cggcggtgacggcgacggcgac 52070
>ref|XM_001231696.1| PREDICTED: Gallus gallus hypothetical protein LOC768643 (LOC768643), mRNA Length = 462 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 696 cggccgccctgacgagtcgcagcgc 720 |||||||||||||||| |||||||| Sbjct: 148 cggccgccctgacgaggcgcagcgc 124
>emb|CT829467.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA055I04, full insert sequence Length = 1251 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 473 ggccggcggcgacggcgacggcgac 497
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1432 ttcaccaccgtcatcagcggc 1452 ||||||||||||||||||||| Sbjct: 1554483 ttcaccaccgtcatcagcggc 1554463
>ref|NM_001073008.1| Oryza sativa (japonica cultivar-group) Os12g0240800 (Os12g0240800) mRNA, complete cds Length = 1350 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 357 gacggcgacggcgaccgcgac 337
>ref|NM_001071694.1| Oryza sativa (japonica cultivar-group) Os10g0534100 (Os10g0534100) mRNA, complete cds Length = 2010 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 1334 catcttcttcaacgccctcat 1354
>ref|NM_001056040.1| Oryza sativa (japonica cultivar-group) Os03g0239300 (Os03g0239300) mRNA, complete cds Length = 1266 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 497 ggccggcggcgacggcgacggcgac 521
>emb|CT573018.19| Mouse DNA sequence from clone RP24-378G4 on chromosome 14, complete sequence Length = 186294 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1955 cagggttttgcaggaatcaaa 1975 ||||||||||||||||||||| Sbjct: 137712 cagggttttgcaggaatcaaa 137692
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 741 cggtgacggcgacggcgaccg 761 ||||||||||||||||||||| Sbjct: 5790347 cggtgacggcgacggcgaccg 5790367
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 acggcggcgacgcgcagccgc 286 ||||||||||||||||||||| Sbjct: 3686323 acggcggcgacgcgcagccgc 3686343
>emb|CT954220.6| Mouse DNA sequence from clone RP23-333G10 on chromosome 13, complete sequence Length = 86424 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1788 gcagagatcaagaagaggaaa 1808 ||||||||||||||||||||| Sbjct: 46810 gcagagatcaagaagaggaaa 46790
>emb|CT030634.12| Mouse DNA sequence from clone RP23-6A14 on chromosome 14, complete sequence Length = 209296 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1955 cagggttttgcaggaatcaaa 1975 ||||||||||||||||||||| Sbjct: 178425 cagggttttgcaggaatcaaa 178445
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 agcgccaaggcaacggcggcg 274 ||||||||||||||||||||| Sbjct: 3285548 agcgccaaggcaacggcggcg 3285528
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 aagcgccaaggcaacggcggc 273 ||||||||||||||||||||| Sbjct: 747714 aagcgccaaggcaacggcggc 747694
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1353 gcgcgcgcagcagcccggcaa 1373 ||||||||||||||||||||| Sbjct: 569414 gcgcgcgcagcagcccggcaa 569394 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1182 gctgatggagcacttcggcatcaag 1206 ||||||||||| ||||||||||||| Sbjct: 3803682 gctgatggagcgcttcggcatcaag 3803658
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1432 ttcaccaccgtcatcagcggc 1452 ||||||||||||||||||||| Sbjct: 1489095 ttcaccaccgtcatcagcggc 1489075
>emb|CT573045.6| Pig DNA sequence from clone CH242-519K3 on chromosome 17, complete sequence Length = 105913 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctccccctcctacgcccctgctcct 36 ||||||||||||| ||||||||||| Sbjct: 41408 ctccccctcctacccccctgctcct 41432
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1314 ggacccgcaggtgtacagcat 1334 ||||||||||||||||||||| Sbjct: 202329 ggacccgcaggtgtacagcat 202349
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 112806 gacggcgacggcgaccgcgac 112786
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 133678 gacggcgacggcgaccgcgac 133698
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 736 gccggcggtgacggcgacggc 756 ||||||||||||||||||||| Sbjct: 1459472 gccggcggtgacggcgacggc 1459452
>ref|XM_386085.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05909.1) partial mRNA Length = 2355 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1371 caaggcggaggagctcctgga 1391 ||||||||||||||||||||| Sbjct: 1425 caaggcggaggagctcctgga 1445
>ref|NM_133643.2| Mus musculus EDAR (ectodysplasin-A receptor)-associated death domain (Edaradd), transcript variant 1, mRNA dbj|AK148351.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370103G13 product:EDAR (ectodysplasin-A receptor)-associated death domain, full insert sequence Length = 2321 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1788 gcagagatcaagaagaggaaa 1808 ||||||||||||||||||||| Sbjct: 149 gcagagatcaagaagaggaaa 169
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 139284 catcttcttcaacgccctcat 139264
>gb|AC015845.8| Homo sapiens chromosome 17, clone RP11-343K8, complete sequence Length = 191957 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 gacgcgcagccgccgccgagc 294 ||||||||||||||||||||| Sbjct: 99827 gacgcgcagccgccgccgagc 99807
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1432 ttcaccaccgtcatcagcggc 1452 ||||||||||||||||||||| Sbjct: 4787599 ttcaccaccgtcatcagcggc 4787619
>gb|AF308741.1| Cloning vector pLM101, complete sequence Length = 3432 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1771 gacgacgatgacaagctgcag 1791 ||||||||||||||||||||| Sbjct: 442 gacgacgatgacaagctgcag 462
>gb|AF308740.1| Cloning vector pLM100, complete sequence Length = 3433 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1771 gacgacgatgacaagctgcag 1791 ||||||||||||||||||||| Sbjct: 442 gacgacgatgacaagctgcag 462
>gb|AF308739.1| Cloning vector pLM99, complete sequence Length = 3431 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1771 gacgacgatgacaagctgcag 1791 ||||||||||||||||||||| Sbjct: 442 gacgacgatgacaagctgcag 462
>gb|AE011940.1| Xanthomonas axonopodis pv. citri str. 306, section 318 of 469 of the complete genome Length = 11410 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 975 gatggtgcgcgccaggctgcg 995 ||||||||||||||||||||| Sbjct: 2646 gatggtgcgcgccaggctgcg 2666
>ref|NM_175746.2| Mus musculus EDAR (ectodysplasin-A receptor)-associated death domain (Edaradd), transcript variant 2, mRNA dbj|AK042414.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630089O21 product:Ectodysplasia A receptor associated death domain, full insert sequence Length = 1696 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1788 gcagagatcaagaagaggaaa 1808 ||||||||||||||||||||| Sbjct: 290 gcagagatcaagaagaggaaa 310
>dbj|AK041545.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630020E19 product:EDAR-ASSOCIATED DEATH DOMAIN PROTEIN homolog [Mus musculus], full insert sequence Length = 1660 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1788 gcagagatcaagaagaggaaa 1808 ||||||||||||||||||||| Sbjct: 261 gcagagatcaagaagaggaaa 281
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1151 acgacacggccgccgccgacgacgt 1175 ||||||| ||||||||||||||||| Sbjct: 108320 acgacaccgccgccgccgacgacgt 108344
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 7796924 gacggcgacggcgaccgcgac 7796904 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 738 cggcggtgacggcgacggcga 758 ||||||||||||||||||||| Sbjct: 16027412 cggcggtgacggcgacggcga 16027432
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 23542992 gacggcgacggcgaccgcgac 23543012
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 20261549 catcttcttcaacgccctcat 20261529
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1151 acgacacggccgccgccgacgacgt 1175 ||||||| ||||||||||||||||| Sbjct: 27373724 acgacaccgccgccgccgacgacgt 27373748
>dbj|BA000027.2| Oryzias latipes DNA, MHC Class I Region Length = 425935 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 tcaccgcggtgacgaaccagc 481 ||||||||||||||||||||| Sbjct: 165711 tcaccgcggtgacgaaccagc 165691
>gb|AF358671.1|AF358671 Mus musculus edar-associated death domain protein (Edaradd) mRNA, complete cds Length = 1605 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1788 gcagagatcaagaagaggaaa 1808 ||||||||||||||||||||| Sbjct: 321 gcagagatcaagaagaggaaa 341
>emb|AL096828.29|HSJ963E22 Human DNA sequence from clone RP5-963E22 on chromosome 20 Contains the C20orf21 gene for a novel protein similar to high-gluose-regulated protein 8 (HGRG8) and five CpG islands, complete sequence Length = 140152 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 831 ccaccggaggctggaggaggc 851 ||||||||||||||||||||| Sbjct: 127872 ccaccggaggctggaggaggc 127852
>gb|AE008686.1|AE008686 Mus musculus T-cell receptor alpha/delta locus section 4 of 4 of the complete region Length = 461875 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1955 cagggttttgcaggaatcaaa 1975 ||||||||||||||||||||| Sbjct: 445093 cagggttttgcaggaatcaaa 445113
>gb|AF395886.1|AF395886 Haloferax volcanii SecY (secY) gene, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 ccgccgccgagcacctgcacgacgt 307 |||||||||||||||| |||||||| Sbjct: 39 ccgccgccgagcaccttcacgacgt 15
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 ccgccgagcacctgcacgacg 306 ||||||||||||||||||||| Sbjct: 259328 ccgccgagcacctgcacgacg 259348
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1151 acgacacggccgccgccgacgacgt 1175 ||||||| ||||||||||||||||| Sbjct: 24878 acgacaccgccgccgccgacgacgt 24902
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 741 cggtgacggcgacggcgaccg 761 ||||||||||||||||||||| Sbjct: 67717 cggtgacggcgacggcgaccg 67737
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1115 tcttcaacacccttctcaagggctt 1139 |||||||||||||||||||| |||| Sbjct: 151710 tcttcaacacccttctcaagagctt 151734
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 871 atgcgggcgcgcggcgtggagcccg 895 ||||||||||||||| ||||||||| Sbjct: 2309282 atgcgggcgcgcggcatggagcccg 2309258
>emb|CR627470.1| Homo sapiens mRNA; cDNA DKFZp547L163 (from clone DKFZp547L163) Length = 2888 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gacgcgcagccgccgccgagc 294 ||||||||||||||||||||| Sbjct: 2529 gacgcgcagccgccgccgagc 2549
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1432 ttcaccaccgtcatcagcggc 1452 ||||||||||||||||||||| Sbjct: 2657359 ttcaccaccgtcatcagcggc 2657339 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1179 cgggctgatggagcacttcggcatc 1203 |||||||||||||| |||||||||| Sbjct: 3332929 cgggctgatggagcgcttcggcatc 3332953 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 739 ggcggtgacggcgacggcgaccgcg 763 ||||||||||||| ||||||||||| Sbjct: 7893809 ggcggtgacggcggcggcgaccgcg 7893833
>gb|AF190404.1|AF190404 Drosophila virilis Prospero (pros) gene, upstream genomic sequence Length = 10344 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 741 cggtgacggcgacggcgaccgcgac 765 ||||||||||||||||||| ||||| Sbjct: 914 cggtgacggcgacggcgacggcgac 890
>dbj|AK120472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110J07, full insert sequence Length = 2011 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 1335 catcttcttcaacgccctcat 1355
>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete sequence Length = 19112 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 868 aggatgcgggcgcgcggcgtg 888 ||||||||||||||||||||| Sbjct: 17258 aggatgcgggcgcgcggcgtg 17238
>dbj|AK101036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000D16, full insert sequence Length = 1723 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 1336 catcttcttcaacgccctcat 1356
>dbj|AK071890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N15, full insert sequence Length = 1874 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 1333 catcttcttcaacgccctcat 1353
>dbj|AK071768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G13, full insert sequence Length = 993 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 268 ggccggcggcgacggcgacggcgac 292
>dbj|AK068149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131M23, full insert sequence Length = 1226 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 431 ggccggcggcgacggcgacggcgac 455
>dbj|AK066038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G22, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 735 ggccggcggtgacggcgacggcgac 759 ||||||||| ||||||||||||||| Sbjct: 498 ggccggcggcgacggcgacggcgac 522
>dbj|AK058873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F06, full insert sequence Length = 1371 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcttcttcaacgccctcat 566 ||||||||||||||||||||| Sbjct: 868 catcttcttcaacgccctcat 888
>gb|AE005043.1| Halobacterium sp. NRC-1 section 74 of 170 of the complete genome Length = 11677 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 736 gccggcggtgacggcgacggc 756 ||||||||||||||||||||| Sbjct: 832 gccggcggtgacggcgacggc 812
>emb|X64521.1|HHFEROXI H.halobium gene for pyruvate:ferredoxin oxidoreductase Length = 3190 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 736 gccggcggtgacggcgacggc 756 ||||||||||||||||||||| Sbjct: 2363 gccggcggtgacggcgacggc 2383
>emb|AJ334823.1|HSA334823 Homo sapiens genomic sequence surrounding NotI site, clone NB6-045R Length = 507 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 736 gccggcggtgacggcgacggcgacc 760 |||||||| |||||||||||||||| Sbjct: 13 gccggcggagacggcgacggcgacc 37
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 gggcgaggccaccagcacctt 614 ||||||||||||||||||||| Sbjct: 3356335 gggcgaggccaccagcacctt 3356355
>gb|AF275345.3| Lycopersicon esculentum putative permease gene, partial cds; suppressor-like protein, putative centromere protein, putative auxin growth promotor protein, and putative protein phosphatase genes, complete cds; LTR-A long terminal repeat, complete sequence; putative copia-like polyprotein gene, complete cds; LTR-B long terminal repeat, complete sequence; MADS-box transcription factor JOINTLESS gene, complete cds; TH65-like protein gene, partial cds; and unknown genes Length = 118761 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1282 ttcgacaagatggtggaggct 1302 ||||||||||||||||||||| Sbjct: 54590 ttcgacaagatggtggaggct 54570
>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete sequence Length = 131385 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1958 ggttttgcaggaatcaaaggc 1978 ||||||||||||||||||||| Sbjct: 88271 ggttttgcaggaatcaaaggc 88251
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 738 cggcggtgacggcgacggcga 758 ||||||||||||||||||||| Sbjct: 94825 cggcggtgacggcgacggcga 94845
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 gacggcgacggcgaccgcgac 765 ||||||||||||||||||||| Sbjct: 95915 gacggcgacggcgaccgcgac 95895
>gb|M64239.1|MUSTCRA Mouse T-cell receptor alpha/delta chain locus Length = 94647 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1955 cagggttttgcaggaatcaaa 1975 ||||||||||||||||||||| Sbjct: 77865 cagggttttgcaggaatcaaa 77885
>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster Length = 27522 Score = 42.1 bits (21), Expect = 8.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 504 gctgctcgccggcatggacgccgccgggctgcggccggacg 544 ||||| ||||| | |||||||||||||||| ||||| |||| Sbjct: 18927 gctgcgcgccgccctggacgccgccgggctccggccagacg 18887 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 319,698,011 Number of extensions: 18060174 Number of successful extensions: 148266 Number of sequences better than 10.0: 119 Number of HSP's gapped: 148253 Number of HSP's successfully gapped: 165 Length of query: 2213 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2190 Effective length of database: 18,503,978,556 Effective search space: 40523713037640 Effective search space used: 40523713037640 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
