ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91f03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121374:Os01g0888600 | 59 | 9e-09 | 2 | Os06g0486300:Os06g0486300 | 50 | 4e-06 | 3 | AF388195: | 49 | 9e-06 | 4 | AK111990:Os03g0129100 | 49 | 9e-06 | 5 | AK098993:Os03g0129100 | 49 | 9e-06 | 6 | AF384030:Os03g0129100 | 49 | 9e-06 | 7 | Os04g0444400:Os04g0444400 | 47 | 3e-05 | 8 | AK121163:Os02g0562600 | 47 | 3e-05 | 9 | AK066134:Os02g0197200 | 40 | 0.003 | 10 | AK072272:Os10g0541000 | 36 | 0.048 | 11 | Os09g0314500:Os09g0314500 | 32 | 0.91 | 12 | AK108171:Os10g0141600 | 32 | 1.2 | 13 | Os04g0590300:Os04g0590300 | 32 | 1.2 | 14 | AK110975:Os03g0587100 | 31 | 1.6 | 15 | AK102947:Os03g0587100 | 31 | 1.6 | 16 | AK100380:Os03g0587100 | 31 | 1.6 | 17 | AK064020:Os03g0587100 | 31 | 1.6 | 18 | AK108899: | 30 | 2.6 | 19 | AK106618:Os01g0284900 | 30 | 2.6 | 20 | AK112072:Os06g0703700 | 30 | 3.4 | 21 | AK107082:Os01g0719800 | 30 | 3.4 | 22 | AK072137:Os08g0483200 | 30 | 3.4 | 23 | AK068161:Os08g0483200 | 30 | 3.4 | 24 | AK109844: | 30 | 4.5 | 25 | AK110032: | 29 | 7.7 | 26 | AK119581:Os09g0498600 | 29 | 7.7 | 27 | AK066995:Os09g0498600 | 29 | 7.7 |
|---|
>AK121374:Os01g0888600 | Length = 502 Score = 58.5 bits (140), Expect = 9e-09 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = +3 Query: 819 ELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQGEDEVRAGEAAPTNEHFVTA 986 ELMLLGFISLLLTV QG +Q C+ WT ++LPC+ + E ++ + P+ HFV A Sbjct: 61 ELMLLGFISLLLTVSQGILQKTCVPPKWTNYLLPCR-KMEDQSKQRGPSEAHFVAA 115 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/39 (48%), Positives = 20/39 (51%) Frame = +2 Query: 113 EEAATLEFTPTWXXXXXXXXXXXXXXXXERCLHYLGKVI 229 E AA LEFTPTW ERCLHYLGK + Sbjct: 5 EAAAALEFTPTWIVAAICSLIVLISLAAERCLHYLGKTL 43 Score = 33.1 bits (74), Expect = 0.41 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = +1 Query: 385 QTFRRKNQKPLYEAILKVKE 444 +T +RKNQK L+EA+LKVKE Sbjct: 41 KTLKRKNQKALFEALLKVKE 60
>Os06g0486300:Os06g0486300 | Length = 528 Score = 49.7 bits (117), Expect = 4e-06 Identities = 27/48 (56%), Positives = 31/48 (64%) Frame = +3 Query: 816 AELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQGEDEVRAGEAA 959 AELMLLGFISLLLTV Q I ICI +S +LPC+ + EAA Sbjct: 61 AELMLLGFISLLLTVAQAPISKICIPKSAANILLPCKAGQDAIEEEAA 108
>AF388195: | Length = 554 Score = 48.5 bits (114), Expect = 9e-06 Identities = 28/44 (63%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +3 Query: 816 AELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQ-GEDEVR 944 AELMLLGFISLLLTV Q I ICI S MLPC+ G+D V+ Sbjct: 60 AELMLLGFISLLLTVAQTPISKICIPESAANIMLPCKAGQDIVK 103
>AK111990:Os03g0129100 | Length = 555 Score = 48.5 bits (114), Expect = 9e-06 Identities = 28/44 (63%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +3 Query: 816 AELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQ-GEDEVR 944 AELMLLGFISLLLTV Q I ICI S MLPC+ G+D V+ Sbjct: 60 AELMLLGFISLLLTVAQTPISKICIPESAANIMLPCKAGQDIVK 103
>AK098993:Os03g0129100 | Length = 555 Score = 48.5 bits (114), Expect = 9e-06 Identities = 28/44 (63%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +3 Query: 816 AELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQ-GEDEVR 944 AELMLLGFISLLLTV Q I ICI S MLPC+ G+D V+ Sbjct: 60 AELMLLGFISLLLTVAQTPISKICIPESAANIMLPCKAGQDIVK 103
>AF384030:Os03g0129100 | Length = 555 Score = 48.5 bits (114), Expect = 9e-06 Identities = 28/44 (63%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +3 Query: 816 AELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQ-GEDEVR 944 AELMLLGFISLLLTV Q I ICI S MLPC+ G+D V+ Sbjct: 60 AELMLLGFISLLLTVAQTPISKICIPESAANIMLPCKAGQDIVK 103
>Os04g0444400:Os04g0444400 | Length = 476 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/38 (63%), Positives = 26/38 (68%) Frame = +3 Query: 819 ELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQGE 932 ELMLLGFISLLL V Q IQ ICI S H LPC+ + Sbjct: 59 ELMLLGFISLLLVVFQEPIQRICIAESLMGHWLPCRSD 96 Score = 33.5 bits (75), Expect = 0.31 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = +2 Query: 116 EAATLEFTPTWXXXXXXXXXXXXXXXXERCLHYLGKVI 229 EA T+E TPTW ER LHYLGK + Sbjct: 5 EATTIEDTPTWIVAAVCSAIVLISFAFERSLHYLGKAL 42
>AK121163:Os02g0562600 | Length = 210 Score = 47.0 bits (110), Expect = 3e-05 Identities = 26/56 (46%), Positives = 32/56 (57%) Frame = +3 Query: 819 ELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPCQGEDEVRAGEAAPTNEHFVTA 986 ELMLLGFISLLL V QG Q IC++ S H+ PC + + + A T H A Sbjct: 71 ELMLLGFISLLLNVFQGLTQKICVKASVMDHLQPC--KLDFSGAKTAKTTAHLAAA 124 Score = 43.1 bits (100), Expect = 4e-04 Identities = 25/59 (42%), Positives = 27/59 (45%) Frame = +2 Query: 74 AEGGGRAMAEHGEEEAATLEFTPTWXXXXXXXXXXXXXXXXERCLHYLGKVINPSSIHP 250 A GGG+A A GE A TLE TPTW ER LH LGK + S P Sbjct: 2 AGGGGKAAAGGGEAPAITLEHTPTWIVSAVCFVIVIISLLFERLLHRLGKRLKKSRKKP 60
>AK066134:Os02g0197200 | Length = 386 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/35 (62%), Positives = 24/35 (68%) Frame = +3 Query: 819 ELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPC 923 ELMLLGFIS LL+V Q I +ICI S MLPC Sbjct: 63 ELMLLGFISFLLSVFQKFINHICIPESAAHLMLPC 97
>AK072272:Os10g0541000 | Length = 537 Score = 36.2 bits (82), Expect = 0.048 Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = +3 Query: 816 AELMLLGFISLLLTVCQGKIQNICIRRSWTLHMLPC-----QGEDEVRAG 950 +ELM LGFISLLL+V I ICI MLPC E EV G Sbjct: 27 SELMTLGFISLLLSVTGRYISRICIPVGAADTMLPCSLRRSSSEQEVPGG 76
>Os09g0314500:Os09g0314500 | Length = 316 Score = 32.0 bits (71), Expect = 0.91 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = -1 Query: 438 DLEDGLVERLLILAPERLQPSQPRAGNGQWTNTADAARWNGGGTGNADAKRRKVMKAGER 259 D DG E L+++ ERL P P ++T A R G+GN + R + G R Sbjct: 80 DGHDGAPEELVVVVSERLNPDAP-----EFTAAASIRRRRSPGSGNGISSTRHWSRRGSR 134
>AK108171:Os10g0141600 | Length = 203 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = -3 Query: 1042 PASAAPPLSSRLPILPM----IWAVTKCSFVGAASPARTSSSPWHGSMWSV 902 P SAAPP S+ L W+ + A +PA T P +G+ WSV Sbjct: 150 PCSAAPPCSATLASATAPPHSAWSSPSSTSAAAPAPASTPRFPANGARWSV 200
>Os04g0590300:Os04g0590300 | Length = 525 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -1 Query: 669 RPCREPATPPNYPWCRDKKRCTPFAQTAPP 580 RP R PA PP+ P CR ++ TP A PP Sbjct: 101 RPARVPA-PPHRPACRRRRPLTPRASPTPP 129
>AK110975:Os03g0587100 | Length = 240 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -1 Query: 462 RDELVTFFDLEDGLVERLLILAPERLQPSQPRAGNG-----QWTNTADAARWNGGGTGNA 298 R+E+ FDL L + L R+ P+ P + + D W+G G G Sbjct: 8 REEIARCFDLVRRLGRGAVYLGSSRVPPTHPHYLHAAELSREIARLLDCTTWSGAGPGFM 67 Query: 297 DAKRRKVMKAGE 262 DA + ++AG+ Sbjct: 68 DAATQGALEAGK 79
>AK102947:Os03g0587100 | Length = 335 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -1 Query: 462 RDELVTFFDLEDGLVERLLILAPERLQPSQPRAGNG-----QWTNTADAARWNGGGTGNA 298 R+E+ FDL L + L R+ P+ P + + D W+G G G Sbjct: 103 REEIARCFDLVRRLGRGAVYLGSSRVPPTHPHYLHAAELSREIARLLDCTTWSGAGPGFM 162 Query: 297 DAKRRKVMKAGE 262 DA + ++AG+ Sbjct: 163 DAATQGALEAGK 174
>AK100380:Os03g0587100 | Length = 240 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -1 Query: 462 RDELVTFFDLEDGLVERLLILAPERLQPSQPRAGNG-----QWTNTADAARWNGGGTGNA 298 R+E+ FDL L + L R+ P+ P + + D W+G G G Sbjct: 8 REEIARCFDLVRRLGRGAVYLGSSRVPPTHPHYLHAAELSREIARLLDCTTWSGAGPGFM 67 Query: 297 DAKRRKVMKAGE 262 DA + ++AG+ Sbjct: 68 DAATQGALEAGK 79
>AK064020:Os03g0587100 | Length = 240 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -1 Query: 462 RDELVTFFDLEDGLVERLLILAPERLQPSQPRAGNG-----QWTNTADAARWNGGGTGNA 298 R+E+ FDL L + L R+ P+ P + + D W+G G G Sbjct: 8 REEIARCFDLVRRLGRGAVYLGSSRVPPTHPHYLHAAELSREIARLLDCTTWSGAGPGFM 67 Query: 297 DAKRRKVMKAGE 262 DA + ++AG+ Sbjct: 68 DAATQGALEAGK 79
>AK108899: | Length = 665 Score = 30.4 bits (67), Expect = 2.6 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 Query: 865 WHTVSSSEMNPRSISSALRQGAVDDRYIQHG 773 WH++ + M PR +S ++ G +D+R HG Sbjct: 570 WHSLGTCSMAPREGNSIVKHGVLDERLNVHG 600
>AK106618:Os01g0284900 | Length = 297 Score = 30.4 bits (67), Expect = 2.6 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = -1 Query: 396 PERLQPS-QPRAGNGQWTNTADAARWNGGGTGNADAKRRKVMKAGERACDGWMDEGLITL 220 P+R P+ P + ++ + +AARW GG +R ++M+ + W+D Sbjct: 127 PDRGAPAPSPWMYSKEYASETEAARWPGGDKRRMRHRRERMMR------EVWLD------ 174 Query: 219 PR*WRHRSARREM 181 R W+ R RR+M Sbjct: 175 -RAWQMRKQRRQM 186
>AK112072:Os06g0703700 | Length = 176 Score = 30.0 bits (66), Expect = 3.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 Query: 690 RNSQKATVPITLCVFSF*ILTLHGCTC 770 RN+ T P+TLC S T GC+C Sbjct: 6 RNASMTTFPLTLCTGSITTATARGCSC 32
>AK107082:Os01g0719800 | Length = 394 Score = 30.0 bits (66), Expect = 3.4 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Frame = +3 Query: 279 PSAVSRLRSRFRRHSISPHRPCSSIDRSLLLVATA-ADVQAQESEAALRGHP-QGQRR*L 452 P V +R R + HR ++ L +T AD Q Q R HP G R + Sbjct: 37 PPLVDPVRRLEVRRRAAVHRQDGGREQVQRLASTRRADAQQQVLHRVPRRHPPHGARADV 96 Query: 453 IHLFPPARHGPHASWFIRLPRTGESPTQKKKTRRK 557 +HL P PH R+PR E + RR+ Sbjct: 97 LHLLPVVEV-PHVLGADRVPRVDEHVGHPPRQRRE 130
>AK072137:Os08g0483200 | Length = 269 Score = 30.0 bits (66), Expect = 3.4 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +3 Query: 261 VRLLSLPSAVSRLRSRFRRHSISPHR-----PCSSIDRSLLLV--ATAADVQAQESEAAL 419 VRL LP+A R +HS+ PH CSS R+ A+A+ A E+EA + Sbjct: 6 VRLPPLPAARHPPLLRLPKHSVPPHGGRVSFACSSGSRAAFAACCASASVAPAAEAEAVV 65 Query: 420 RGHPQGQRR*LI 455 P+G R LI Sbjct: 66 E-EPEGPRTRLI 76
>AK068161:Os08g0483200 | Length = 269 Score = 30.0 bits (66), Expect = 3.4 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +3 Query: 261 VRLLSLPSAVSRLRSRFRRHSISPHR-----PCSSIDRSLLLV--ATAADVQAQESEAAL 419 VRL LP+A R +HS+ PH CSS R+ A+A+ A E+EA + Sbjct: 6 VRLPPLPAARHPPLLRLPKHSVPPHGGRVSFACSSGSRAAFAACCASASVAPAAEAEAVV 65 Query: 420 RGHPQGQRR*LI 455 P+G R LI Sbjct: 66 E-EPEGPRTRLI 76
>AK109844: | Length = 665 Score = 29.6 bits (65), Expect = 4.5 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -3 Query: 865 WHTVSSSEMNPRSISSALRQGAVDDRYIQHG 773 WH++ + M P++ +S ++ G +D+R HG Sbjct: 570 WHSLGTCSMAPKNGNSIVKHGVLDERLNVHG 600
>AK110032: | Length = 463 Score = 28.9 bits (63), Expect = 7.7 Identities = 22/70 (31%), Positives = 28/70 (40%) Frame = -3 Query: 1135 SSFQSHITPQKKETITVCTKSNYVITLDRQTPASAAPPLSSRLPILPMIWAVTKCSFVGA 956 SS S T + T T S I + T +SAAP SS +P T S Sbjct: 33 SSTPSSTTTSSTPSSTSTTSS---IPITTSTSSSAAPTTSSTIPSTSSALPTTSSSIASI 89 Query: 955 ASPARTSSSP 926 S + SS+P Sbjct: 90 TSASTASSTP 99
>AK119581:Os09g0498600 | Length = 398 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = -2 Query: 1127 PIPHHPTKKRDNHSLHEIKLCNHLGPADTGFCRAAAEQPPPDSADDLGCDKM 972 P P HPT + + + +GP D R PPP S + +G D+M Sbjct: 215 PAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRP----PPPHSMEHMGADRM 262
>AK066995:Os09g0498600 | Length = 616 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = -2 Query: 1127 PIPHHPTKKRDNHSLHEIKLCNHLGPADTGFCRAAAEQPPPDSADDLGCDKM 972 P P HPT + + + +GP D R PPP S + +G D+M Sbjct: 433 PAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRP----PPPHSMEHMGADRM 480 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,944,245 Number of extensions: 864771 Number of successful extensions: 3414 Number of sequences better than 10.0: 27 Number of HSP's gapped: 3402 Number of HSP's successfully gapped: 31 Length of query: 406 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 303 Effective length of database: 11,275,632 Effective search space: 3416516496 Effective search space used: 3416516496 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
