Clone Name | FLbaf91f03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 119 bits (60), Expect = 2e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 112 ggaggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccat 171 ||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||| | Sbjct: 38621275 ggaggcggcggcggcgctggagttcacgccgacgtggatcgtcgcggcgatctgctccct 38621334 Query: 172 catcgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggtaa 227 ||||||||||||||||||| ||||||| | |||||||| |||||||||||||||| Sbjct: 38621335 catcgtgctcatctccctcgccgccgagaggtgcctccattacctcggcaaggtaa 38621390 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 814 atgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggga 870 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| Sbjct: 38621772 atgcagagctgatgcttctggggttcatctccctgctgctgacggtgtcccaaggga 38621828 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcga 125 ||||||||||||||||| |||||||| Sbjct: 7526333 ggagcacggcgaggaggtggcggcga 7526358 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 21258188 tggcggagcaaggcgaggaggaggccggcgacgc 21258155 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 825 atgcttctcgggttcatctcgctgctgct 853 ||||| || |||||||||||||||||||| Sbjct: 13916499 atgctgctggggttcatctcgctgctgct 13916471
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 119 bits (60), Expect = 2e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 112 ggaggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccat 171 ||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||| | Sbjct: 141956 ggaggcggcggcggcgctggagttcacgccgacgtggatcgtcgcggcgatctgctccct 142015 Query: 172 catcgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggtaa 227 ||||||||||||||||||| ||||||| | |||||||| |||||||||||||||| Sbjct: 142016 catcgtgctcatctccctcgccgccgagaggtgcctccattacctcggcaaggtaa 142071 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 814 atgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggga 870 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| Sbjct: 142453 atgcagagctgatgcttctggggttcatctccctgctgctgacggtgtcccaaggga 142509
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 119 bits (60), Expect = 2e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 112 ggaggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccat 171 ||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||| | Sbjct: 79248 ggaggcggcggcggcgctggagttcacgccgacgtggatcgtcgcggcgatctgctccct 79307 Query: 172 catcgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggtaa 227 ||||||||||||||||||| ||||||| | |||||||| |||||||||||||||| Sbjct: 79308 catcgtgctcatctccctcgccgccgagaggtgcctccattacctcggcaaggtaa 79363 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 814 atgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggga 870 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| Sbjct: 79745 atgcagagctgatgcttctggggttcatctccctgctgctgacggtgtcccaaggga 79801
>gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, complete cds Length = 1798 Score = 119 bits (60), Expect = 2e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 116 gaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcatc 175 ||||||||| |||| |||||||| || ||||||||||||||| |||||||| ||||| Sbjct: 91 gaggcggcggcgctggagttcacaccgacgtggatcgtcgcggcggtctgctctctcatc 150 Query: 176 gtgctcatctccctcctcgccgagcgatgcctccactacctcggcaag 223 |||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 151 gtgctcctctcgctcgtcgccgagcgatgcctccactacctcggcaag 198 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagatcc 876 |||| |||||||||| ||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 255 agagttgatgcttctggggttcatctccctgctgctgacggtgttccaggggatgatcc 313 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaag 445 ||||| ||||||||||||| |||||| | |||||||||||||||| Sbjct: 211 aagaaccagaagccgctcttcgaggcgctgctcaaggtcaaagaag 256
>gb|AY104078.1| Zea mays PCO070411 mRNA sequence Length = 1798 Score = 119 bits (60), Expect = 2e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 116 gaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcatc 175 ||||||||| |||| |||||||| || ||||||||||||||| |||||||| ||||| Sbjct: 91 gaggcggcggcgctggagttcacaccgacgtggatcgtcgcggcggtctgctctctcatc 150 Query: 176 gtgctcatctccctcctcgccgagcgatgcctccactacctcggcaag 223 |||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 151 gtgctcctctcgctcgtcgccgagcgatgcctccactacctcggcaag 198 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagatcc 876 |||| |||||||||| ||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 255 agagttgatgcttctggggttcatctccctgctgctgacggtgttccaggggatgatcc 313 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaag 445 ||||| ||||||||||||| |||||| | |||||||||||||||| Sbjct: 211 aagaaccagaagccgctcttcgaggcgctgctcaaggtcaaagaag 256
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 117 bits (59), Expect = 1e-22 Identities = 98/111 (88%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| |||| Sbjct: 17559 ggaggcggcgacgctggagttcacgccgacgtggatcgtggcggcggtgtgctcgctcat 17500 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 17499 ggtgctcatctccctcgtcgccgagcgctgcctccattacctcggcaaggt 17449 Score = 109 bits (55), Expect = 2e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagat 874 ||||||| |||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 16642 tgcagagttgatgcttcttgggttcatctcgctgctgctgacggtgttccagggcctgat 16583 Query: 875 ccagaatatatgcattcgtcgtagctggacactccacatgctgccatgcca 925 ||||| | ||||||| || | |||||||| ||||||||||||||||||| Sbjct: 16582 ccagaggacctgcattcctcctcgctggacagtccacatgctgccatgcca 16532 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaaggt 447 |||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 17315 aagaatcagaagccgctctacgaggcgctcctcaaggtcaaggaaggt 17268
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 117 bits (59), Expect = 1e-22 Identities = 98/111 (88%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| |||| Sbjct: 79404 ggaggcggcgacgctggagttcacgccgacgtggatcgtggcggcggtgtgctcgctcat 79345 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 79344 ggtgctcatctccctcgtcgccgagcgctgcctccattacctcggcaaggt 79294 Score = 109 bits (55), Expect = 2e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagat 874 ||||||| |||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 78487 tgcagagttgatgcttcttgggttcatctcgctgctgctgacggtgttccagggcctgat 78428 Query: 875 ccagaatatatgcattcgtcgtagctggacactccacatgctgccatgcca 925 ||||| | ||||||| || | |||||||| ||||||||||||||||||| Sbjct: 78427 ccagaggacctgcattcctcctcgctggacagtccacatgctgccatgcca 78377 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaaggt 447 |||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 79160 aagaatcagaagccgctctacgaggcgctcctcaaggtcaaggaaggt 79113
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 117 bits (59), Expect = 1e-22 Identities = 98/111 (88%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| |||| Sbjct: 20345814 ggaggcggcgacgctggagttcacgccgacgtggatcgtggcggcggtgtgctcgctcat 20345755 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 20345754 ggtgctcatctccctcgtcgccgagcgctgcctccattacctcggcaaggt 20345704 Score = 109 bits (55), Expect = 2e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagat 874 ||||||| |||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 20344897 tgcagagttgatgcttcttgggttcatctcgctgctgctgacggtgttccagggcctgat 20344838 Query: 875 ccagaatatatgcattcgtcgtagctggacactccacatgctgccatgcca 925 ||||| | ||||||| || | |||||||| ||||||||||||||||||| Sbjct: 20344837 ccagaggacctgcattcctcctcgctggacagtccacatgctgccatgcca 20344787 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaaggt 447 |||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 20345570 aagaatcagaagccgctctacgaggcgctcctcaaggtcaaggaaggt 20345523 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 817 cagagctgatgcttctcgggttcatctcgctgctgct 853 ||||||| ||| | || |||||||||||||||||||| Sbjct: 4974377 cagagctcatggtgctagggttcatctcgctgctgct 4974341
>ref|NM_001062102.1| Oryza sativa (japonica cultivar-group) Os05g0418100 (Os05g0418100) mRNA, partial cds Length = 2920 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| |||| Sbjct: 60 ggaggcggcgacgctggagttcacgccgacgtggatcgtggcggcggtgtgctcgctcat 119 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaag 223 ||||||||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 120 ggtgctcatctccctcgtcgccgagcgctgcctccattacctcggcaag 168 Score = 103 bits (52), Expect = 1e-18 Identities = 94/108 (87%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagatcca 877 |||| |||||||||| |||||||||||||||||||||||||||| |||||| |||||| Sbjct: 225 agagttgatgcttcttgggttcatctcgctgctgctgacggtgttccagggcctgatcca 284 Query: 878 gaatatatgcattcgtcgtagctggacactccacatgctgccatgcca 925 || | ||||||| || | |||||||| ||||||||||||||||||| Sbjct: 285 gaggacctgcattcctcctcgctggacagtccacatgctgccatgcca 332 Score = 67.9 bits (34), Expect = 8e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaag 445 |||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 181 aagaatcagaagccgctctacgaggcgctcctcaaggtcaaggaag 226
>dbj|AK121347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121J07, full insert sequence Length = 2921 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||||||||||| ||||||||||| ||||||||||| ||| || ||||| |||| Sbjct: 61 ggaggcggcgacgctggagttcacgccgacgtggatcgtggcggcggtgtgctcgctcat 120 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaag 223 ||||||||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 121 ggtgctcatctccctcgtcgccgagcgctgcctccattacctcggcaag 169 Score = 103 bits (52), Expect = 1e-18 Identities = 94/108 (87%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggggaagatcca 877 |||| |||||||||| |||||||||||||||||||||||||||| |||||| |||||| Sbjct: 226 agagttgatgcttcttgggttcatctcgctgctgctgacggtgttccagggcctgatcca 285 Query: 878 gaatatatgcattcgtcgtagctggacactccacatgctgccatgcca 925 || | ||||||| || | |||||||| ||||||||||||||||||| Sbjct: 286 gaggacctgcattcctcctcgctggacagtccacatgctgccatgcca 333 Score = 67.9 bits (34), Expect = 8e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 400 aagaatcagaagccgctctacgaggccatcctcaaggtcaaagaag 445 |||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 182 aagaatcagaagccgctctacgaggcgctcctcaaggtcaaggaag 227
>ref|NM_001051575.1| Oryza sativa (japonica cultivar-group) Os01g0888600 (Os01g0888600) mRNA, complete cds Length = 2114 Score = 111 bits (56), Expect = 6e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 112 ggaggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccat 171 ||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||| | Sbjct: 271 ggaggcggcggcggcgctggagttcacgccgacgtggatcgtcgcggcgatctgctccct 330 Query: 172 catcgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaag 223 ||||||||||||||||||| ||||||| | |||||||| |||||||||||| Sbjct: 331 catcgtgctcatctccctcgccgccgagaggtgcctccattacctcggcaag 382 Score = 73.8 bits (37), Expect = 1e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggga 870 ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| Sbjct: 439 agagctgatgcttctggggttcatctccctgctgctgacggtgtcccaaggga 491
>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full insert sequence Length = 2115 Score = 111 bits (56), Expect = 6e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 112 ggaggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccat 171 ||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||| | Sbjct: 272 ggaggcggcggcggcgctggagttcacgccgacgtggatcgtcgcggcgatctgctccct 331 Query: 172 catcgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaag 223 ||||||||||||||||||| ||||||| | |||||||| |||||||||||| Sbjct: 332 catcgtgctcatctccctcgccgccgagaggtgcctccattacctcggcaag 383 Score = 73.8 bits (37), Expect = 1e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggga 870 ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| Sbjct: 440 agagctgatgcttctggggttcatctccctgctgctgacggtgtcccaaggga 492
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggg 869 ||||||||||||||| || |||||||||||||||||||||| |||| ||||||| Sbjct: 21354079 tgcagagctgatgctgctggggttcatctcgctgctgctgaacgtgttccagggg 21354025 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 407 agaagccgctctacgaggccatcctcaaggtcaaagaaggt 447 |||||||||||||||||| |||||||||||||||||||| Sbjct: 21354222 agaagccgctctacgagggactcctcaaggtcaaagaaggt 21354182 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 cgaggaggaggcggcgacgctcgag 133 |||||||||||||||| |||||||| Sbjct: 8110491 cgaggaggaggcggcggcgctcgag 8110467 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ggcgaggaggaggcggcgacgctcg 131 |||||||||||||||||| |||||| Sbjct: 34774518 ggcgaggaggaggcggcggcgctcg 34774542
>dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0435E12 Length = 143188 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggg 869 ||||||||||||||| || |||||||||||||||||||||| |||| ||||||| Sbjct: 136614 tgcagagctgatgctgctggggttcatctcgctgctgctgaacgtgttccagggg 136560 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 407 agaagccgctctacgaggccatcctcaaggtcaaagaaggt 447 |||||||||||||||||| |||||||||||||||||||| Sbjct: 136757 agaagccgctctacgagggactcctcaaggtcaaagaaggt 136717
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggg 869 ||||||||||||||| || |||||||||||||||||||||| |||| ||||||| Sbjct: 14032 tgcagagctgatgctgctggggttcatctcgctgctgctgaacgtgttccagggg 13978 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 407 agaagccgctctacgaggccatcctcaaggtcaaagaaggt 447 |||||||||||||||||| |||||||||||||||||||| Sbjct: 14175 agaagccgctctacgagggactcctcaaggtcaaagaaggt 14135
>emb|CT828318.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI226D03, full insert sequence Length = 2127 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggg 869 |||||||||||| || |||||||||||||||||||||| |||| ||||||| Sbjct: 379 agagctgatgctgctggggttcatctcgctgctgctgaacgtgttccagggg 430 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 407 agaagccgctctacgaggccatcctcaaggtcaaagaag 445 |||||||||||||||||| |||||||||||||||||| Sbjct: 342 agaagccgctctacgagggactcctcaaggtcaaagaag 380
>ref|NM_001053688.1| Oryza sativa (japonica cultivar-group) Os02g0562600 (Os02g0562600) mRNA, complete cds Length = 3141 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggg 869 |||||||||||| || |||||||||||||||||||||| |||| ||||||| Sbjct: 331 agagctgatgctgctggggttcatctcgctgctgctgaacgtgttccagggg 382 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 407 agaagccgctctacgaggccatcctcaaggtcaaagaag 445 |||||||||||||||||| |||||||||||||||||| Sbjct: 294 agaagccgctctacgagggactcctcaaggtcaaagaag 332
>dbj|AK121163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H22, full insert sequence Length = 3145 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccagggg 869 |||||||||||| || |||||||||||||||||||||| |||| ||||||| Sbjct: 333 agagctgatgctgctggggttcatctcgctgctgctgaacgtgttccagggg 384 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 407 agaagccgctctacgaggccatcctcaaggtcaaagaag 445 |||||||||||||||||| |||||||||||||||||| Sbjct: 296 agaagccgctctacgagggactcctcaaggtcaaagaag 334
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 61.9 bits (31), Expect = 5e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||| ||||| ||||| |||||| ||||||||||||||| || |||||| ||| Sbjct: 22141889 ggaggcgacgacgatcgaggacacgccgacgtggatcgtcgcggcggtgtgctccgccat 22141830 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||| || | |||||| | || ||||||||||||||||| Sbjct: 22141829 cgtgctcatctccttcgccttcgagcgctcgctgcactacctcggcaaggt 22141779 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| || |||||||||||||||||||| Sbjct: 22141498 agagctgatgctgctggggttcatctcgctgctgct 22141463 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gagcacggcgaggaggaggcggcga 125 |||||||||| |||||||||||||| Sbjct: 21604593 gagcacggcgcggaggaggcggcga 21604617
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 61.9 bits (31), Expect = 5e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||| ||||| ||||| |||||| ||||||||||||||| || |||||| ||| Sbjct: 40370 ggaggcgacgacgatcgaggacacgccgacgtggatcgtcgcggcggtgtgctccgccat 40311 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||| || | |||||| | || ||||||||||||||||| Sbjct: 40310 cgtgctcatctccttcgccttcgagcgctcgctgcactacctcggcaaggt 40260 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| || |||||||||||||||||||| Sbjct: 39979 agagctgatgctgctggggttcatctcgctgctgct 39944
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 61.9 bits (31), Expect = 5e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||| ||||| ||||| |||||| ||||||||||||||| || |||||| ||| Sbjct: 66395 ggaggcgacgacgatcgaggacacgccgacgtggatcgtcgcggcggtgtgctccgccat 66336 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||| || | |||||| | || ||||||||||||||||| Sbjct: 66335 cgtgctcatctccttcgccttcgagcgctcgctgcactacctcggcaaggt 66285 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| || |||||||||||||||||||| Sbjct: 66004 agagctgatgctgctggggttcatctcgctgctgct 65969
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 61.9 bits (31), Expect = 5e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||| ||||| ||||| |||||| ||||||||||||||| || |||||| ||| Sbjct: 11750 ggaggcgacgacgatcgaggacacgccgacgtggatcgtcgcggcggtgtgctccgccat 11691 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaaggt 225 ||||||||||||| || | |||||| | || ||||||||||||||||| Sbjct: 11690 cgtgctcatctccttcgccttcgagcgctcgctgcactacctcggcaaggt 11640 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| || |||||||||||||||||||| Sbjct: 11359 agagctgatgctgctggggttcatctcgctgctgct 11324
>ref|NM_001059428.1| Oryza sativa (japonica cultivar-group) Os04g0444400 (Os04g0444400) mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 2e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||||| ||||| ||||| |||||| ||||||||||||||| || |||||| ||| Sbjct: 12 ggaggcgacgacgatcgaggacacgccgacgtggatcgtcgcggcggtgtgctccgccat 71 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaagg 224 ||||||||||||| || | |||||| | || |||||||||||||||| Sbjct: 72 cgtgctcatctccttcgccttcgagcgctcgctgcactacctcggcaagg 121 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| || |||||||||||||||||||| Sbjct: 174 agagctgatgctgctggggttcatctcgctgctgct 209
>gb|BT009442.1| Triticum aestivum clone wlmk4.pk0025.f7:fis, full insert mRNA sequence Length = 1666 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 819 gagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggg 868 ||||||||||| || |||||||||||||||||||| || |||| |||||| Sbjct: 209 gagctgatgctgctggggttcatctcgctgctgctcaccgtgttccaggg 258
>gb|AY029314.1| Zea mays seven transmembrane protein Mlo3 mRNA, complete cds Length = 1869 Score = 60.0 bits (30), Expect = 2e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||| ||||||||| ||| |||||| ||||||||||| ||| ||| |||||| |||| Sbjct: 89 ggaggaggcgacgctggaggacacgcctacgtggatcgtggcgtccgtgtgctccgtcat 148 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaagg 224 ||| ||||||||| || || |||||| |||||| |||||||||||| Sbjct: 149 cgtcctcatctccttcgtcttcgagcgcgcgctccaccacctcggcaagg 198
>gb|AY108219.1| Zea mays PCO123899 mRNA sequence Length = 856 Score = 60.0 bits (30), Expect = 2e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 115 ggaggcggcgacgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcat 174 ||||| ||||||||| ||| |||||| ||||||||||| ||| ||| |||||| |||| Sbjct: 73 ggaggaggcgacgctggaggacacgcctacgtggatcgtggcgtccgtgtgctccgtcat 132 Query: 175 cgtgctcatctccctcctcgccgagcgatgcctccactacctcggcaagg 224 ||| ||||||||| || || |||||| |||||| |||||||||||| Sbjct: 133 cgtcctcatctccttcgtcttcgagcgcgcgctccaccacctcggcaagg 182
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctga 855 ||||||||||||||| ||||| |||||||||||||||||| Sbjct: 39042 tgcagagctgatgctgctcggcgtcatctcgctgctgctga 39082
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 815 tgcagagctgatgcttctcgggttcatctcgctgctgctga 855 ||||||||||||||| ||||| |||||||||||||||||| Sbjct: 4067380 tgcagagctgatgctgctcggcgtcatctcgctgctgctga 4067420
>gb|AY581255.1| Hordeum vulgare subsp. vulgare Mlo3 (Mlo3) mRNA, complete cds Length = 1666 Score = 56.0 bits (28), Expect = 3e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 126 cgctcgagttcacgcccacgtggatcgtcgcgctcgtctgctccatcatcgtgctcatct 185 |||||||||||||||| || |||||||| ||| | ||||||||| |||| || |||||| Sbjct: 61 cgctcgagttcacgccgacatggatcgtggcgttagtctgctccgtcatggtcatcatct 120 Query: 186 ccct 189 |||| Sbjct: 121 ccct 124 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 819 gagctgatgcttctcgggttcatctcgctgctgctgacggtgtgccaggg 868 ||||||||||| || ||||||||||| |||||||| || |||| |||||| Sbjct: 216 gagctgatgctgctggggttcatctccctgctgctcaccgtgttccaggg 265
>dbj|AK242559.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090002G02, full insert sequence Length = 1983 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgctga 855 |||||||||||| ||||| |||||||||||||||||| Sbjct: 329 agagctgatgctgctcggcgtcatctcgctgctgctga 366
>ref|NM_001068418.1| Oryza sativa (japonica cultivar-group) Os08g0435800 (Os08g0435800) mRNA, complete cds Length = 1946 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Minus Query: 237 catccatccatccatcacacgccc 260 |||||||||||||||||||||||| Sbjct: 1772 catccatccatccatcacacgccc 1749
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Plus Query: 237 catccatccatccatcacacgccc 260 |||||||||||||||||||||||| Sbjct: 21158064 catccatccatccatcacacgccc 21158087 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 ggagcacggcgaggaggaggcggcga 125 ||||||||||||||||| |||||||| Sbjct: 27236740 ggagcacggcgaggaggtggcggcga 27236715
>gb|AY029315.1| Zea mays seven transmembrane protein Mlo4 mRNA, complete cds Length = 1841 Score = 48.1 bits (24), Expect = 0.075 Identities = 33/36 (91%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| ||||| |||||||||||||||| Sbjct: 247 agagctgatgctgctcggagtcatctcgctgctgct 282
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Plus Query: 237 catccatccatccatcacacgccc 260 |||||||||||||||||||||||| Sbjct: 129274 catccatccatccatcacacgccc 129297
>dbj|AK121712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078H12, full insert sequence Length = 1965 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Minus Query: 237 catccatccatccatcacacgccc 260 |||||||||||||||||||||||| Sbjct: 1773 catccatccatccatcacacgccc 1750
>gb|AY103929.1| Zea mays PCO095788 mRNA sequence Length = 1679 Score = 48.1 bits (24), Expect = 0.075 Identities = 33/36 (91%) Strand = Plus / Plus Query: 818 agagctgatgcttctcgggttcatctcgctgctgct 853 |||||||||||| ||||| |||||||||||||||| Sbjct: 249 agagctgatgctgctcggagtcatctcgctgctgct 284
>emb|CT829510.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055M11, full insert sequence Length = 1098 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 97 ggcggagcacggcgaggaggaggcggcgacg 127 ||||||| |||||||||||| |||||||||| Sbjct: 322 ggcggaggacggcgaggagggggcggcgacg 352
>gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, complete sequence Length = 177775 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 acccctcatccatccatccatca 253 ||||||||||||||||||||||| Sbjct: 101731 acccctcatccatccatccatca 101709
>gb|M37561.1|MACTRIIS1 Macaca mulatta triosephosphate isomerase (tpi) gene, exon 1 Length = 280 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 43 gggccatggcggaggacggcgaggagg 69
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence Length = 115459 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 38566 gggccatggcggaggacggcgaggagg 38540
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence Length = 222930 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 79461 gggccatggcggaggacggcgaggagg 79487
>emb|BX537304.14| Zebrafish DNA sequence from clone CH211-283H6 in linkage group 5, complete sequence Length = 157564 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 230 aacccctcatccatccatccatc 252 ||||||||||||||||||||||| Sbjct: 10801 aacccctcatccatccatccatc 10779
>emb|CR610831.1| full-length cDNA clone CS0DA008YK23 of Neuroblastoma of Homo sapiens (human) Length = 1629 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 333 gggccatggcggaggacggcgaggagg 359
>gb|J04603.1|HUMTPI1A Homo sapiens triosephosphate isomerase (TPI) gene, TPI-8B allele, partial cds Length = 645 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 519 gggccatggcggaggacggcgaggagg 545
>gb|M10036.1|HUMTPI Human triosephosphate isomerase mRNA, complete cds Length = 1835 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 258 gggccatggcggaggacggcgaggagg 284
>emb|X69723.1|HSTPI1G H.sapiens TPI1 gene for triosephosphate isomerase Length = 5005 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 519 gggccatggcggaggacggcgaggagg 545
>gb|M57946.1|CHPTPI P.troglodytes triose-phosphate isomerase (TPI) gene, complete cds Length = 4957 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 gggccatggcggagcacggcgaggagg 116 |||||||||||||| |||||||||||| Sbjct: 519 gggccatggcggaggacggcgaggagg 545
>emb|CT834884.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032L21, full insert sequence Length = 624 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 281 tggcggagcaaggcgaggaggaggccggcgacgc 248
>emb|CT834883.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032J24, full insert sequence Length = 641 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 281 tggcggagcaaggcgaggaggaggccggcgacgc 248
>emb|CT834862.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI022H11, full insert sequence Length = 610 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 267 tggcggagcaaggcgaggaggaggccggcgacgc 234
>emb|CT834847.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI012P06, full insert sequence Length = 641 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 281 tggcggagcaaggcgaggaggaggccggcgacgc 248
>emb|CT834810.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA014E24, full insert sequence Length = 614 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 272 tggcggagcaaggcgaggaggaggccggcgacgc 239
>emb|CT834802.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA003A22, full insert sequence Length = 620 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 272 tggcggagcaaggcgaggaggaggccggcgacgc 239
>dbj|AK243203.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100041C10, full insert sequence Length = 615 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 275 tggcggagcaaggcgaggaggaggccggcgacgc 242
>gb|AC125113.3| Mus musculus BAC clone RP24-251K23 from chromosome 6, complete sequence Length = 127380 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ctctccctctctttcctccacc 47 |||||||||||||||||||||| Sbjct: 89545 ctctccctctctttcctccacc 89524
>gb|AC010319.10| Homo sapiens chromosome 19 clone CTD-2521M24, complete sequence Length = 141370 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 acccctcatccatccatccatc 252 |||||||||||||||||||||| Sbjct: 45409 acccctcatccatccatccatc 45388
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 acggcgaggaggaggcggcgac 126 |||||||||||||||||||||| Sbjct: 7725226 acggcgaggaggaggcggcgac 7725247
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 44.1 bits (22), Expect = 1.2 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 96 tggcggagcacggcgaggaggagg-cggcgacgc 128 |||||||||| ||||||||||||| ||||||||| Sbjct: 155697 tggcggagcaaggcgaggaggaggccggcgacgc 155664
>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7 Length = 93134 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 catccatccatccatcacacgc 258 |||||||||||||||||||||| Sbjct: 91547 catccatccatccatcacacgc 91568
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcga 125 ||||||||||||||||| |||||||| Sbjct: 75125 ggagcacggcgaggaggtggcggcga 75150
>gb|AY029313.1| Zea mays seven transmembrane protein Mlo2 mRNA, complete cds Length = 2030 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 819 gagctgatgcttctcgggttcatctcgctgctgctgac 856 ||||||||| ||| |||||||| |||||||||||||| Sbjct: 306 gagctgatgactctggggttcatatcgctgctgctgac 343
>dbj|AP005971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079K11 Length = 130082 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 acggcgaggaggaggcggcgac 126 |||||||||||||||||||||| Sbjct: 92788 acggcgaggaggaggcggcgac 92809
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 ggagcacggcgaggaggaggcggcga 125 ||||||||||||||||| |||||||| Sbjct: 59943 ggagcacggcgaggaggtggcggcga 59918
>gb|AC151055.3| Mus musculus BAC clone RP23-24A9 from 6, complete sequence Length = 230998 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ctctccctctctttcctccacc 47 |||||||||||||||||||||| Sbjct: 124588 ctctccctctctttcctccacc 124609
>gb|AY105309.1| Zea mays PCO148749 mRNA sequence Length = 2013 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 819 gagctgatgcttctcgggttcatctcgctgctgctgac 856 ||||||||| ||| |||||||| |||||||||||||| Sbjct: 306 gagctgatgactctggggttcatatcgctgctgctgac 343
>emb|AL772407.4| Mouse DNA sequence from clone RP23-112N9 on chromosome 2, complete sequence Length = 202231 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 735 tctttttgaattttgacattgc 756 |||||||||||||||||||||| Sbjct: 3934 tctttttgaattttgacattgc 3913
>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete sequence Length = 239244 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 227 atcaacccctcatccatccatccatc 252 |||||||| ||||||||||||||||| Sbjct: 168440 atcaacccatcatccatccatccatc 168415
>emb|CR855188.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0102D10, complete sequence Length = 78391 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gagcacggcgaggaggaggcggcga 125 |||||||||| |||||||||||||| Sbjct: 4260 gagcacggcgcggaggaggcggcga 4284
>emb|CR855153.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0823A09, complete sequence Length = 85663 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gagcacggcgaggaggaggcggcga 125 |||||||||| |||||||||||||| Sbjct: 72619 gagcacggcgcggaggaggcggcga 72643
>ref|NM_001071593.1| Oryza sativa (japonica cultivar-group) Os10g0515400 (Os10g0515400) mRNA, complete cds Length = 1728 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||||||||||||| |||||||||| Sbjct: 669 ggagcacggcgaggcggaggcggcg 693
>ref|NM_001052947.1| Oryza sativa (japonica cultivar-group) Os02g0243900 (Os02g0243900) mRNA, complete cds Length = 441 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 cgaggaggaggcggcgacgctcgag 133 |||||||||||||||| |||||||| Sbjct: 261 cgaggaggaggcggcggcgctcgag 237
>gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, complete sequence Length = 169209 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 715 caatcactttatgtgtcttctcttt 739 |||||||||| |||||||||||||| Sbjct: 57502 caatcactttctgtgtcttctcttt 57526
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 817 cagagctgatgcttctcgggttcatctcgctgctgct 853 ||||||| ||| | || |||||||||||||||||||| Sbjct: 68962 cagagctcatggtgctagggttcatctcgctgctgct 68926
>gb|AC091092.3| Papio anubis clone RP41-191D8, complete sequence Length = 167732 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 19106 cccctcatccatccatccatc 19126
>gb|AY358351.1| Homo sapiens clone DNA91779 GARS1883 (UNQ1883) mRNA, complete cds Length = 3884 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||| |||||||||||||||||||| Sbjct: 294 ggaggacggcgaggaggaggcggcg 318
>dbj|AK128132.1| Homo sapiens cDNA FLJ46253 fis, clone TESTI4022158, highly similar to Rattus norvegicus transmembrane receptor Unc5H2 (Unc5h2) Length = 3933 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||| |||||||||||||||||||| Sbjct: 348 ggaggacggcgaggaggaggcggcg 372
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ccctcatccatccatccatca 253 ||||||||||||||||||||| Sbjct: 188342 ccctcatccatccatccatca 188322
>gb|AC134698.10| Homo sapiens chromosome 8, clone RP11-359P18, complete sequence Length = 173305 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 983 agcccagatcatcggcagaat 1003 ||||||||||||||||||||| Sbjct: 37823 agcccagatcatcggcagaat 37803
>emb|AJ538309.1|PFL538309 Platichthys flesus microsatellite DNA, locus StPfl011 Length = 439 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ccctcatccatccatccatca 253 ||||||||||||||||||||| Sbjct: 134 ccctcatccatccatccatca 154
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||||||||||||| |||||||||| Sbjct: 30208 ggagcacggcgaggcggaggcggcg 30232
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gcggagcacggcgaggaggaggcgg 122 ||||||||||||||||||| ||||| Sbjct: 86411 gcggagcacggcgaggaggcggcgg 86387
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||||||||||||| |||||||||| Sbjct: 19346173 ggagcacggcgaggcggaggcggcg 19346149
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gcggagcacggcgaggaggaggcgg 122 ||||||||||||||||||| ||||| Sbjct: 32175798 gcggagcacggcgaggaggcggcgg 32175774
>gb|AC090625.5| Homo sapiens chromosome 11, clone RP4-683L5, complete sequence Length = 142522 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 136394 cccctcatccatccatccatc 136374
>emb|AL359832.33| Human DNA sequence from clone RP11-790G19 on chromosome 10 Contains the 5' end of the gene for transmembrane receptor Unc5H2 (UNC5H2),the 3'end of a novel gene and two CpG islands, complete sequence Length = 195130 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||| |||||||||||||||||||| Sbjct: 189963 ggaggacggcgaggaggaggcggcg 189987
>emb|AL354921.12| Human DNA sequence from clone RP5-840O13 on chromosome 11p12-13, complete sequence Length = 106657 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 105566 cccctcatccatccatccatc 105586
>emb|AL049868.20|HSJ927M24 Human DNA sequence from clone RP5-927M24 on chromosome 20 Contains a novel gene (LOC128439), the 5' end of the gene for a novel protein (KIAA1219), the RPS3P2 gene for ribosomal protein S3 pseudogene 2 and a CpG island, complete sequence Length = 121922 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 25725 cccctcatccatccatccatc 25745
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 agcacggcgaggaggaggcgg 122 ||||||||||||||||||||| Sbjct: 139434 agcacggcgaggaggaggcgg 139414
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gagcacggcgaggaggaggcggcga 125 |||||||||| |||||||||||||| Sbjct: 39135 gagcacggcgcggaggaggcggcga 39159
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gagcacggcgaggaggaggcggcga 125 |||||||||| |||||||||||||| Sbjct: 126682 gagcacggcgcggaggaggcggcga 126706
>emb|BX897714.6| Zebrafish DNA sequence from clone DKEY-218L23 in linkage group 25, complete sequence Length = 184435 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 tcatccatccatccatcacac 256 ||||||||||||||||||||| Sbjct: 149082 tcatccatccatccatcacac 149102
>gb|AF230636.7| Homo sapiens chromosome 8 clone RP4-801G19 map cen, complete sequence Length = 100712 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 983 agcccagatcatcggcagaat 1003 ||||||||||||||||||||| Sbjct: 21375 agcccagatcatcggcagaat 21355
>gb|AC140118.11| Homo sapiens 12 BAC RP13-507P19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 62172 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ccctcatccatccatccatca 253 ||||||||||||||||||||| Sbjct: 43733 ccctcatccatccatccatca 43753
>gb|AC090058.21| Homo sapiens 12 BAC RP11-112N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181102 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 tctctccctctctttcctcca 45 ||||||||||||||||||||| Sbjct: 87850 tctctccctctctttcctcca 87830
>gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, complete sequence Length = 183646 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 42538 cccctcatccatccatccatc 42558
>gb|AC027348.8| Homo sapiens chromosome 16 clone CTD-2595P9, complete sequence Length = 147454 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 89367 cccctcatccatccatccatc 89387
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ggcgaggaggaggcggcgacgctcg 131 |||||||||||||||||| |||||| Sbjct: 92366 ggcgaggaggaggcggcggcgctcg 92390
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 825 atgcttctcgggttcatctcgctgctgct 853 ||||| || |||||||||||||||||||| Sbjct: 76801 atgctgctggggttcatctcgctgctgct 76773
>gb|AC129918.10| Homo sapiens chromosome 8, clone CTD-2132E17, complete sequence Length = 142854 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ccctcatccatccatccatca 253 ||||||||||||||||||||| Sbjct: 27953 ccctcatccatccatccatca 27933
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 cgaggaggaggcggcgacgctcgag 133 |||||||||||||||| |||||||| Sbjct: 98684 cgaggaggaggcggcggcgctcgag 98660
>ref|NM_170744.2| Homo sapiens unc-5 homolog B (C. elegans) (UNC5B), mRNA dbj|AB096256.1| Homo sapiens p53RDL1 mRNA for p53-regulated receptor for death and life, complete cds Length = 3935 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggagcacggcgaggaggaggcggcg 124 |||| |||||||||||||||||||| Sbjct: 303 ggaggacggcgaggaggaggcggcg 327
>emb|AL935202.7| Zebrafish DNA sequence from clone CH211-197E11, complete sequence Length = 189096 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cccctcatccatccatccatc 252 ||||||||||||||||||||| Sbjct: 111307 cccctcatccatccatccatc 111327
>gb|AC010330.7| Homo sapiens chromosome 19 clone CTD-2657C13, complete sequence Length = 80240 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ccctcatccatccatccatca 253 ||||||||||||||||||||| Sbjct: 42946 ccctcatccatccatccatca 42966 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 190,304,732 Number of extensions: 10895966 Number of successful extensions: 534382 Number of sequences better than 10.0: 103 Number of HSP's gapped: 534365 Number of HSP's successfully gapped: 144 Length of query: 1218 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1195 Effective length of database: 18,503,978,556 Effective search space: 22112254374420 Effective search space used: 22112254374420 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)