ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94e04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066425:Os02g0167100 | 528 | e-150 | 2 | AK120712:Os12g0608600 | 433 | e-121 | 3 | AK059102:Os12g0608600 | 433 | e-121 | 4 | AK107088:Os01g0319000 | 32 | 0.92 | 5 | AK067689:Os01g0319000 | 32 | 0.92 | 6 | Os06g0238700:Os06g0238700 | 31 | 2.7 | 7 | Os11g0265200:Os11g0265200 | 30 | 3.5 | 8 | AK101887:Os05g0145600 | 30 | 4.6 | 9 | AK063945:Os05g0145600 | 30 | 4.6 | 10 | Os04g0621900:Os04g0621900 | 30 | 4.6 | 11 | Os07g0151200:Os07g0151200 | 30 | 6.0 | 12 | Os05g0525800:Os05g0525800 | 30 | 6.0 | 13 | AK110416: | 30 | 6.0 | 14 | AK110127: | 30 | 6.0 | 15 | AK068759:Os03g0726400 | 29 | 7.8 |
|---|
>AK066425:Os02g0167100 | Length = 336 Score = 528 bits (1361), Expect = e-150 Identities = 256/326 (78%), Positives = 275/326 (84%), Gaps = 3/326 (0%) Frame = +3 Query: 234 PAKLRSPISLPSQQAARRP---MAQDDPVVSAQWLQQHLGQPDIKVLDASWYMPHESRDP 404 P RSP S S A+R+P MAQDD VVSAQWL +HLGQPD+KVLDASWYMP E RDP Sbjct: 9 PPFSRSPSSR-SSSASRQPTGPMAQDDSVVSAQWLHEHLGQPDVKVLDASWYMPVEKRDP 67 Query: 405 WQEYQVAHIPGALFFDIDGIVDRATDLPHMLPSEEAFAAAVSALGINNHDKVIVYDGKGF 584 WQEYQVAHIPGALFFDIDGIVD TDLPHMLPS+EAFAAAVSAL I NHDKVIVYDGKGF Sbjct: 68 WQEYQVAHIPGALFFDIDGIVDLTTDLPHMLPSQEAFAAAVSALDIKNHDKVIVYDGKGF 127 Query: 585 FSAPRVWWMFRVLGHDKVWVLDGGFPQWQASGFSLGSSCLDDAVLKYRAANSAVESAYNG 764 FSAPRVWWMFRV GH+K+WVLDGG PQW+ SGF L SS DAV K +AANS VE YNG Sbjct: 128 FSAPRVWWMFRVYGHNKIWVLDGGLPQWRTSGFVLESSTPGDAVQKTKAANSVVERIYNG 187 Query: 765 ESTNAATFQTEFRPQLFWTLEKVKHNTAAKVHQVVDARAKGRFDGVMPEPREGVRSGHIP 944 + + TFQTEF+P +FWTLEKVKHN A+ HQVVDAR+KGRFDGV PEPREGVRSGHIP Sbjct: 188 QLASDVTFQTEFQPHIFWTLEKVKHNMDAQSHQVVDARSKGRFDGVAPEPREGVRSGHIP 247 Query: 945 GTKCVPFPEMFDSAQMLLPADDLSNKFEQAGISLDHPIVVTCGSGVTACILALGLYRVGK 1124 GTKCVPF EMFD A MLLPAD++ KFEQAGISLD PIVVTCGSGVTACILALGLYR+GK Sbjct: 248 GTKCVPFLEMFDDAPMLLPADEIRKKFEQAGISLDRPIVVTCGSGVTACILALGLYRIGK 307 Query: 1125 HDVPVYDGSWTEWEAQPDSDYPKVAS 1202 D+PVYDGSWTEWEA PD DYPKV S Sbjct: 308 QDIPVYDGSWTEWEALPDHDYPKVTS 333
>AK120712:Os12g0608600 | Length = 387 Score = 433 bits (1114), Expect = e-121 Identities = 195/301 (64%), Positives = 240/301 (79%) Frame = +3 Query: 279 ARRPMAQDDPVVSAQWLQQHLGQPDIKVLDASWYMPHESRDPWQEYQVAHIPGALFFDID 458 A + + +PVVSA+WL +L PD+KVLDASWYMP E R+P QEYQVAHIPGALFFD+D Sbjct: 81 ATNALPRTEPVVSAEWLHANLKDPDVKVLDASWYMPAEQRNPLQEYQVAHIPGALFFDVD 140 Query: 459 GIVDRATDLPHMLPSEEAFAAAVSALGINNHDKVIVYDGKGFFSAPRVWWMFRVLGHDKV 638 GI DR + LPHMLPSE+AF+AAVS+LGI N D ++VYDGKG FSA RVWWMFRV GHDKV Sbjct: 141 GISDRTSSLPHMLPSEKAFSAAVSSLGIYNKDGIVVYDGKGLFSAARVWWMFRVFGHDKV 200 Query: 639 WVLDGGFPQWQASGFSLGSSCLDDAVLKYRAANSAVESAYNGESTNAATFQTEFRPQLFW 818 WVLDGG PQW+ASG+ + SS DA+LK AA A+E Y G+ +TF+ + +P L W Sbjct: 201 WVLDGGLPQWRASGYDVESSASSDAILKASAAREAIEKVYQGQLVGPSTFEAKLQPHLIW 260 Query: 819 TLEKVKHNTAAKVHQVVDARAKGRFDGVMPEPREGVRSGHIPGTKCVPFPEMFDSAQMLL 998 L++VK N AK HQ++DAR K RFDG +PEPR+G+RSGH+PG+KCVPFP++ DS+Q LL Sbjct: 261 NLDQVKENIDAKTHQLIDARGKPRFDGAVPEPRKGIRSGHVPGSKCVPFPQLLDSSQKLL 320 Query: 999 PADDLSNKFEQAGISLDHPIVVTCGSGVTACILALGLYRVGKHDVPVYDGSWTEWEAQPD 1178 P ++L +FEQ GISLD P+V +CG+GVTACILALGL+R+GK DVPVYDGSWTEW A PD Sbjct: 321 PPEELRKRFEQEGISLDQPLVSSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAHPD 380 Query: 1179 S 1181 + Sbjct: 381 T 381
>AK059102:Os12g0608600 | Length = 313 Score = 433 bits (1114), Expect = e-121 Identities = 195/301 (64%), Positives = 240/301 (79%) Frame = +3 Query: 279 ARRPMAQDDPVVSAQWLQQHLGQPDIKVLDASWYMPHESRDPWQEYQVAHIPGALFFDID 458 A + + +PVVSA+WL +L PD+KVLDASWYMP E R+P QEYQVAHIPGALFFD+D Sbjct: 7 ATNALPRTEPVVSAEWLHANLKDPDVKVLDASWYMPAEQRNPLQEYQVAHIPGALFFDVD 66 Query: 459 GIVDRATDLPHMLPSEEAFAAAVSALGINNHDKVIVYDGKGFFSAPRVWWMFRVLGHDKV 638 GI DR + LPHMLPSE+AF+AAVS+LGI N D ++VYDGKG FSA RVWWMFRV GHDKV Sbjct: 67 GISDRTSSLPHMLPSEKAFSAAVSSLGIYNKDGIVVYDGKGLFSAARVWWMFRVFGHDKV 126 Query: 639 WVLDGGFPQWQASGFSLGSSCLDDAVLKYRAANSAVESAYNGESTNAATFQTEFRPQLFW 818 WVLDGG PQW+ASG+ + SS DA+LK AA A+E Y G+ +TF+ + +P L W Sbjct: 127 WVLDGGLPQWRASGYDVESSASSDAILKASAAREAIEKVYQGQLVGPSTFEAKLQPHLIW 186 Query: 819 TLEKVKHNTAAKVHQVVDARAKGRFDGVMPEPREGVRSGHIPGTKCVPFPEMFDSAQMLL 998 L++VK N AK HQ++DAR K RFDG +PEPR+G+RSGH+PG+KCVPFP++ DS+Q LL Sbjct: 187 NLDQVKENIDAKTHQLIDARGKPRFDGAVPEPRKGIRSGHVPGSKCVPFPQLLDSSQKLL 246 Query: 999 PADDLSNKFEQAGISLDHPIVVTCGSGVTACILALGLYRVGKHDVPVYDGSWTEWEAQPD 1178 P ++L +FEQ GISLD P+V +CG+GVTACILALGL+R+GK DVPVYDGSWTEW A PD Sbjct: 247 PPEELRKRFEQEGISLDQPLVSSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAHPD 306 Query: 1179 S 1181 + Sbjct: 307 T 307
>AK107088:Os01g0319000 | Length = 418 Score = 32.3 bits (72), Expect = 0.92 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 15/103 (14%) Frame = -2 Query: 269 RGQRDWGAELCRSTDAGPRSI--FLFNGRGQGG-------KKIGALALAVSRI-CVSRKG 120 RGQR WGA + D G S L G GG ++ AL A + + C+S G Sbjct: 174 RGQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGG 233 Query: 119 ---GDVDMAAAR--RSRFGFEITLETIVPRTVRFPYDQVDGSS 6 VD+A R RS +G + L+ + P D +D +S Sbjct: 234 LFLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATS 276
>AK067689:Os01g0319000 | Length = 418 Score = 32.3 bits (72), Expect = 0.92 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 15/103 (14%) Frame = -2 Query: 269 RGQRDWGAELCRSTDAGPRSI--FLFNGRGQGG-------KKIGALALAVSRI-CVSRKG 120 RGQR WGA + D G S L G GG ++ AL A + + C+S G Sbjct: 174 RGQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGG 233 Query: 119 ---GDVDMAAAR--RSRFGFEITLETIVPRTVRFPYDQVDGSS 6 VD+A R RS +G + L+ + P D +D +S Sbjct: 234 LFLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATS 276
>Os06g0238700:Os06g0238700 | Length = 412 Score = 30.8 bits (68), Expect = 2.7 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 352 SGCPRCCCSHCAETTGSSCAIGRRAACCEG 263 +GC RCC H E++ SCA A C G Sbjct: 371 AGCDRCCACHVEESSSCSCA----ALVCSG 396
>Os11g0265200:Os11g0265200 | Length = 495 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +1 Query: 67 VISNPNRLRRAAAISTSPPFLETQILETAKARAPIFL--PPWPLP 195 V S+PN + + + PP L I +TA A +PI + PP P P Sbjct: 3 VDSHPNNINDGRLLLSPPPLLPILISDTAAAISPISMAAPPQPQP 47
>AK101887:Os05g0145600 | Length = 454 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -3 Query: 325 HCAETTGSSCAIGRRAACCEGREIGERSFAGQRTQGQEVFFFLTAEAR 182 H A + ++ A+GRR E R++A ++ VF LTA+ R Sbjct: 16 HAAASAVAAAAMGRRGVATSTEEYNRRNYANNISEYNTVFGSLTAQRR 63
>AK063945:Os05g0145600 | Length = 454 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -3 Query: 325 HCAETTGSSCAIGRRAACCEGREIGERSFAGQRTQGQEVFFFLTAEAR 182 H A + ++ A+GRR E R++A ++ VF LTA+ R Sbjct: 16 HAAASAVAAAAMGRRGVATSTEEYNRRNYANNISEYNTVFGSLTAQRR 63
>Os04g0621900:Os04g0621900 | Length = 647 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +1 Query: 949 LNVFHSLRCLIVHKCSSLQMIYQISLSKQGFRLITRL 1059 L HSLR L V +C SL + + SLS QG+ L RL Sbjct: 480 LQSLHSLRHLEVFRCPSLPLCLE-SLSGQGYELCPRL 515
>Os07g0151200:Os07g0151200 | Length = 596 Score = 29.6 bits (65), Expect = 6.0 Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 24/119 (20%) Frame = -3 Query: 406 HGSLLSCGMYQEASNTLISGCPRCCCSHCAETTGSSCAIG-----RRAACCEGREIGERS 242 HG L+C Y S++ C RC + A CA G R AC + Sbjct: 380 HGGALTCPDYSSRSSSSFWDCTRCLKAAAASAGCGFCAAGGGDKLRAGACLAAAAAASNA 439 Query: 241 FAGQ--RTQGQEVF-----------------FFLTAEARGARRLGLSPWLSRGFVFPGR 122 A R +G+E + ++ A + G +G PW+ V+P R Sbjct: 440 TARDACRGEGREWYTRGCPSRYGWLAMAGLALYIAAFSPG---MGTVPWIVNSEVYPLR 495
>Os05g0525800:Os05g0525800 | Length = 398 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +3 Query: 321 QWLQQHLGQPDIK-VLDASWYMPHESRDPWQEYQVA 425 QW+QQHL + +I+ V+DA + H+ W+ +A Sbjct: 280 QWVQQHLARGNIEDVVDARMHGDHDINSVWKVVDIA 315
>AK110416: | Length = 1053 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 1104 GLYRVGKHDVPVYDGSWTEWEAQPDSDYPKVAST 1205 G+ V K DV SWT W P S+YP +T Sbjct: 173 GMSAVRKIDVSSGKVSWTAWSPNPQSNYPVSIAT 206
>AK110127: | Length = 777 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = +3 Query: 690 GSSCLDDAVLKYRAANSAVESAYNGESTNAATFQTEFRP-QLFWTLEKVKHNTAAKVHQV 866 GS+ DA Y AN +++A ++TNAA + F P Q + + + T V Sbjct: 57 GSTQPADARAHYFLANGGIDAAQLADTTNAANIASTFEPLQPIYDTDVESYLTHEHQQVV 116 Query: 867 VDARAKGRFDGVMPEPREGVRSGH 938 + A +GR + + R R+ H Sbjct: 117 ISAIEQGRRETLQDFHRNLDRTMH 140
>AK068759:Os03g0726400 | Length = 410 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Frame = +3 Query: 291 MAQDDPVVSAQWLQQHLGQPDIKVLDASWYMPHESRDPWQEYQVAHIPGALFF---DIDG 461 ++ D P L +H + V DAS +PH++++ + + A + F D+ Sbjct: 166 VSHDPPSAEQDELLRHAQDKILYVDDASTAVPHDNQEAERREEEARKAREMTFRGDDVSS 225 Query: 462 IVDRATDLPHMLPSEEAFAAAVSALGINNHDKVIVYDGKG 581 VD + LP E+ + G N I + G G Sbjct: 226 SVDHDAQVTKPLPEEQLKSMDSIFEGTTNLSNGITFRGPG 265 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 48,727,258 Number of extensions: 1222845 Number of successful extensions: 3941 Number of sequences better than 10.0: 15 Number of HSP's gapped: 3934 Number of HSP's successfully gapped: 15 Length of query: 508 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 403 Effective length of database: 11,195,550 Effective search space: 4511806650 Effective search space used: 4511806650 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
