>Q6DK99:CNFNB_XENLA Cornifelin homolog B - Xenopus laevis (African clawed frog)|
          Length = 111
 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
 Frame = +3

Query: 1389 ASYSDEWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLIL 1568
            +S S +W++D+  CC +   CL   F PC    +++          GE            
Sbjct: 17   SSNSSQWNSDVFDCCEDMGTCLCGTFVPCILACKVSK-------DYGE------------ 57

Query: 1569 SCCCYTC------CVRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIR 1712
             CCC  C       VR  +R+R +I G  C+D++    C  C L Q  RE++ R
Sbjct: 58   -CCCLPCLFGSVLAVRTGIRERYHIEGSICNDWVCLSFCAPCTLCQMARELKAR 110

>Q6NUC1:CNFNA_XENLA Cornifelin homolog A - Xenopus laevis (African clawed frog)|
          Length = 111

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
 Frame = +3

Query: 1392 SYSDEWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLILS 1571
            S S +W++D+  CC +  +CL   F PC        +A       GE             
Sbjct: 18   SNSSQWNSDVFDCCEDMGVCLCGTFVPC-------ILACKVSQDFGE------------- 57

Query: 1572 CCCYTC------CVRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIR 1712
            CCC  C       VR  +R+R +I G  C D++    C  CAL Q  RE++ R
Sbjct: 58   CCCLPCLFGSILAVRTGIRERYHIEGSICKDWVCLSFCGPCALCQMARELKTR 110

>Q6DK93:CNFN_XENTR Cornifelin homolog - Xenopus tropicalis (Western clawed frog)|
            (Silurana tropicalis)
          Length = 111

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
 Frame = +3

Query: 1392 SYSDEWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLILS 1571
            S S +W++D+  CC +  +CL   F PC        +A       GE             
Sbjct: 18   SNSSQWNSDVFDCCEDMGICLCGTFVPC-------ILACKVSQDFGE------------- 57

Query: 1572 CCCYTC------CVRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIR 1712
            CCC  C       VR  +R+R +I G  C+D++    C  C L Q  RE++ R
Sbjct: 58   CCCLPCLFGSVLAVRTGIRERYHIEGSICNDWVCLSFCGQCTLCQMARELKAR 110

>Q9BYD5:CNFN_HUMAN Cornifelin - Homo sapiens (Human)|
          Length = 112

 Score = 45.4 bits (106), Expect = 9e-04
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
 Frame = +3

Query: 1404 EWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLILSCCCY 1583
            +WH  L  CC++  +CL      CGTF+ +  +A       GE C           C  Y
Sbjct: 23   DWHTGLTDCCNDMPVCL------CGTFAPLC-LACRISDDFGECC-----------CAPY 64

Query: 1584 TC----CVRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIR 1712
                   +R  +R+R +I G    D+ +   C  CAL Q  RE++IR
Sbjct: 65   LPGGLHSIRTGMRERYHIQGSVGHDWAALTFCLPCALCQMARELKIR 111

>Q6PCW6:CNFN_MOUSE Cornifelin - Mus musculus (Mouse)|
          Length = 111

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
 Frame = +3

Query: 1404 EWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLILSCCCY 1583
            +WH  L  CC++  +CL      CGTF+ +  +A       GE C           C  Y
Sbjct: 22   DWHTGLTDCCNDMPVCL------CGTFAPLC-LACRISDDFGECC-----------CAPY 63

Query: 1584 TC----CVRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIR 1712
                   +R  +R+R +I G    D+ +   C  CAL Q  RE++IR
Sbjct: 64   LPGGLHSLRTGMRERYHIQGSVGHDWAALTFCLPCALCQMARELKIR 110

>Q66I68:CNFN_DANRE Cornifelin homolog - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 112

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
 Frame = +3

Query: 1356 VPYNHDLVSS-----TASYS-DEWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKP 1517
            +PY  + ++S       SY+   W +D+  CC +  + L   F PC    ++A       
Sbjct: 1    MPYQAESMTSQPQMTVTSYTVSHWSSDVCDCCDDCGIRLCGAFIPCILGCKVAQ------ 54

Query: 1518 MSSGEACNDIMAYSLILSCCCYTCCVRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWR 1697
              +G++C        +++       +R  +R R +I G  CDD++    C  C L Q  R
Sbjct: 55   -DNGDSCCLPFLPGAMVA-------LRTSIRDRYHINGSVCDDWVIMTCCSFCGLCQLAR 106

Query: 1698 EVEIRG 1715
            E + RG
Sbjct: 107  EQKARG 112

>Q0VBW2:CNFN_BOVIN Cornifelin - Bos taurus (Bovine)|
          Length = 111

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
 Frame = +3

Query: 1404 EWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLILSCCCY 1583
            +WH  L  CC++  +CL      CGTF+ +  +A       GE             CCC 
Sbjct: 22   DWHTGLTDCCNDMPVCL------CGTFAPLC-LACRISDDFGE-------------CCCT 61

Query: 1584 TCC------VRRKLRQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIR 1712
                     +R  +R+R  I G    D+ +   C  CAL Q  RE++IR
Sbjct: 62   PYLPGGLHSLRTGMRERYRIQGSIGKDWAALTFCLPCALCQMARELKIR 110

>Q3ZCB2:PLAC8_BOVIN Placenta-specific gene 8 protein - Bos taurus (Bovine)|
          Length = 116

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
 Frame = +3

Query: 1380 SSTASYSDEWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYS 1559
            S  A  +  W   L  C S+  +CL      CGTF                AC   +A  
Sbjct: 18   SGPAPQNSNWQTGLCDCFSDCGVCL------CGTFCFTCL-----------ACQ--VASD 58

Query: 1560 LILSCCCYTCCVRRKL-RQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIRGA 1718
            +   C C T    R L R R  I G  CDDF+    C  C+L Q  R++  R A
Sbjct: 59   MNECCLCGTSVAMRTLYRTRYGIPGSICDDFMVTHCCPLCSLCQIKRDINRRRA 112

>Q9NZF1:PLAC8_HUMAN Placenta-specific gene 8 protein - Homo sapiens (Human)|
          Length = 115

 Score = 42.0 bits (97), Expect = 0.010
 Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
 Frame = +3

Query: 1389 ASYSDEWHADLLGCCSEPALCL-KTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLI 1565
            A  +  W   +  C S+  +CL  TF FPC                    C   +A  + 
Sbjct: 20   APQNSNWQTGMCDCFSDCGVCLCGTFCFPC------------------LGCQ--VAADMN 59

Query: 1566 LSCCCYTCCVRRKL-RQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIRGA 1718
              C C T    R L R R  I G  CDD+++ + C  C L Q  R++  R A
Sbjct: 60   ECCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRA 111

>Q96S55:WRIP1_HUMAN ATPase WRNIP1 - Homo sapiens (Human)|
          Length = 665

 Score = 41.2 bits (95), Expect = 0.017
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = -1

Query: 599 DEADEAHGVQPRELRDVGQVPHVRHRCAPGFSLPADKSPGFLGAGKR----NAAGLVNPR 432
           +E D+    + RE  D    P    R  P F +    SPG  G+GKR     AAG  +PR
Sbjct: 97  EEGDDGGETESRESYDAPPTPSGA-RLIPDFPVARSSSPGRKGSGKRPAAAAAAGSASPR 155

Query: 431 AWRRSEGRGGLRCPSDDDPAGDS 363
           +W  +E +       D D  GD+
Sbjct: 156 SWDEAEAQEEEEAVGDGDGDGDA 178

>Q5REK4:PLAC8_PONPY Placenta-specific gene 8 protein - Pongo pygmaeus (Orangutan)|
          Length = 115

 Score = 41.2 bits (95), Expect = 0.017
 Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
 Frame = +3

Query: 1389 ASYSDEWHADLLGCCSEPALCL-KTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLI 1565
            A  +  W   +  C S+  +CL  TF FPC                    C   +A  + 
Sbjct: 20   APQNSNWQTGMCDCFSDCGVCLCGTFCFPC------------------LGCQ--VAADMN 59

Query: 1566 LSCCCYTCCVRRKL-RQRLNIAGGCCDDFLSHVMCCCCALVQEWREVEIRGA 1718
              C C T    R L R R  I G  CDD+++   C  C L Q  R++  R A
Sbjct: 60   ECCLCGTSVAMRTLYRTRYGIPGSICDDYMATFCCPHCTLCQIKRDINRRRA 111

>P12270:TPR_HUMAN Nucleoprotein TPR - Homo sapiens (Human)|
          Length = 2349

 Score = 37.7 bits (86), Expect = 0.19
 Identities = 25/94 (26%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = +3

Query: 894  ITLVDNARVRERIEYIERD--QCEYSLDEEDKEVQEALLNPDPGTNPSIVLKKTLSCSYP 1067
            +  V++ R R+R+E +ER+  + E SL+ E ++VQ   +          ++KKT + +  
Sbjct: 1216 VAQVESLRYRQRVELLERELQELEDSLNAEREKVQ---VTAKTMAQHEELMKKTETMNVV 1272

Query: 1068 NLPFNEALRKESEKLQVELQRSQSNMDMAQCEVI 1169
             +  N+ LR+E E+L+ +LQ+ Q+ +   + +++
Sbjct: 1273 -METNKMLREEKERLEQDLQQMQAKVRKLELDIL 1305

>Q8CG07:WRIP1_RAT ATPase WRNIP1 - Rattus norvegicus (Rat)|
          Length = 660

 Score = 35.8 bits (81), Expect = 0.71
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = -1

Query: 599 DEADEAHGVQPRELRDVGQVPHVRHRCAPGFSLPADKSPGFLGAGKR----NAAGLVNPR 432
           +E D+    + RE  D    P    R  P F +    SP   G GKR     AAG  +PR
Sbjct: 97  EEGDDGGETESRESYDAPPTPSGA-RLIPDFPVARSSSPARKGLGKRPAAAAAAGSASPR 155

Query: 431 AWRRSEGRGGLRCPSDDDPAGDSGKAD 351
           +W  +E +       +++ AG  G  D
Sbjct: 156 SWDETEAQ-------EEEEAGVDGDGD 175

>Q91XU0:WRIP1_MOUSE ATPase WRNIP1 - Mus musculus (Mouse)|
          Length = 660

 Score = 35.8 bits (81), Expect = 0.71
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = -1

Query: 599 DEADEAHGVQPRELRDVGQVPHVRHRCAPGFSLPADKSPGFLGAGKR----NAAGLVNPR 432
           +E D+    + RE  D    P    R  P F +    SP   G GKR     AAG  +PR
Sbjct: 97  EEGDDGGETESRESYDAPPTPSGA-RLIPDFPVARSSSPARKGMGKRPAAAAAAGSASPR 155

Query: 431 AWRRSEGRGGLRCPSDDDPAGDSGKAD 351
           +W  +E +       +++ AG  G  D
Sbjct: 156 SWDEAEAQ-------EEEEAGVDGDGD 175

>Q8K451:GP156_RAT Probable G-protein coupled receptor 156 - Rattus norvegicus (Rat)|
          Length = 792

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
 Frame = +3

Query: 1395 YSDEWHADLLGCCSEPALCLKTFFFPCGTFSRIASIAKNKPMSSGEACNDIMAYSLILSC 1574
            YSD W A +LGC     L L    +  G  + ++S   N+ ++       ++  +L+L  
Sbjct: 220  YSDVWIALVLGC---KGLLLLYGAYLAGLTNHVSSPPVNQSLTI------MVGVNLLLLT 270

Query: 1575 CCYTCCVRRKLRQRLNIAGGCCDD--FLSHVMCCCCALVQEWREVEIRGAYGGKTKITPP 1748
                  V R L    N+  G      F+      CC  + + R+   R A+ G+ +    
Sbjct: 271  AGLLFVVTRYLHSWPNLVFGLTSGGIFVCTTTVNCCVFLPQLRQ---RKAFEGENQTIRH 327

Query: 1749 AHQYMEH*AATLRSQKKEKNSYSARGLNSCKLKILT 1856
              +Y    + T RS+  E  S   R   SC  ++LT
Sbjct: 328  MAKYFSTPSKTFRSKFDEDQSCHLRDEXSCMERLLT 363

>Q8VZ40:PUB14_ARATH E3 ubiquitin ligase PUB14 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 632

 Score = 33.5 bits (75), Expect = 3.5
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
 Frame = +3

Query: 702  ELKKYPETREPLEQLEDALRRGYLLVNSCQDRSFLYLLAMGWNIVYRFRTAQTEIDNYLR 881
            ELKK   T    E +  AL     L  S    S L+ L    ++V +FR    EI+  L 
Sbjct: 60   ELKKDQITG--FEAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALS 117

Query: 882  LVPLITLVDNARVRERIE--YIERDQCEYSLDEEDKEVQEALLNPDPGTNPSIVLKKTLS 1055
             +P   +  +  VRE+++  + +  + +   +E D ++   L   +   +P  ++ K LS
Sbjct: 118  QIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDLAMAENVMDPDPIILKRLS 177

Query: 1056 CSYPNLPFNEALRKESEKLQVELQRSQSNMD---MAQCEVIHHLLGVTRTVESSIPEEST 1226
                    +E L+KES  +         + D        ++ +L+    T+ESS P+ ST
Sbjct: 178  QELQLTTIDE-LKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFV-TMESSDPDPST 235

>O95696:BRD1_HUMAN Bromodomain-containing protein 1 - Homo sapiens (Human)|
          Length = 1058

 Score = 32.7 bits (73), Expect = 6.0
 Identities = 29/78 (37%), Positives = 35/78 (44%)
 Frame = -1

Query: 539 PHVRHRCAPGFSLPADKSPGFLGAGKRNAAGLVNPRAWRRSEGRGGLRCPSDDDPAGDSG 360
           P  R R   G S   ++SPG     KR  AGL N        G GG R  S+ +P G  G
Sbjct: 797 PRKRSRSTCGDSEVEEESPG-----KRLDAGLTN--------GFGGAR--SEQEPGGGLG 841

Query: 359 KADTVRRRRAQICEIAHS 306
           +  T RRR A    I+ S
Sbjct: 842 RKATPRRRCASESSISSS 859

>Q3AGD1:URE2_SYNSC Urease subunit beta - Synechococcus sp. (strain CC9605)|
          Length = 106

 Score = 32.3 bits (72), Expect = 7.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 617 RGRRLDDEADEAHGVQPRELRDVGQVPHVRHRCAPGFS 504
           RG+RLD  A  A   +P + RDV  +P    RC  GF+
Sbjct: 60  RGQRLDIPAGTAIRFEPGDSRDVNLIPFAGARCVIGFN 97

>Q6L3Y2:R1B11_SOLDE Putative late blight resistance protein homolog R1B-11 - Solanum|
            demissum (Wild potato)
          Length = 1252

 Score = 32.3 bits (72), Expect = 7.8
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 930  IEYIERDQCEYSLDEEDKEVQEALLNPDPGTNPSIVLKKTLSCSYPNLPFNEALRKESEK 1109
            ++YIE D C  S+ +  K +QE  +  +  TN  +V+ K L   +     +E +RK    
Sbjct: 1153 LKYIEVDICNKSVVKSAKYIQETQVEYNQNTNFKLVIIKKLVLKFDRFHGDEEIRKRLSS 1212

Query: 1110 L 1112
            L
Sbjct: 1213 L 1213

>Q08289:CACB2_HUMAN Voltage-dependent L-type calcium channel subunit beta-2 - Homo|
            sapiens (Human)
          Length = 660

 Score = 32.3 bits (72), Expect = 7.8
 Identities = 35/157 (22%), Positives = 62/157 (39%)
 Frame = +3

Query: 948  DQCEYSLDEEDKEVQEALLNPDPGTNPSIVLKKTLSCSYPNLPFNEALRKESEKLQVELQ 1127
            D CE+  D    E      +P   + P+ +L +TL+ S  +LP +  L   S+  Q + Q
Sbjct: 448  DACEHLADY--LEAYWKATHPPSSSLPNPLLSRTLATS--SLPLSPTLASNSQGSQGD-Q 502

Query: 1128 RSQSNMDMAQCEVIHHLLGVTRTVESSIPEESTDXXXXXXXXXXXXXXXEDSAKSYDDDS 1307
            R+  +  +           V    +S     S+                +++   +D ++
Sbjct: 503  RTDRSAPIRSASQAEEEPSVEPVKKSQHRSSSSAPHHNHRSGTSRGLSRQET---FDSET 559

Query: 1308 PKKQKDAYVAPRSSSPVPYNHDLVSSTASYSDEWHAD 1418
             + +  AYV P+      Y+HD V   AS+ D  H D
Sbjct: 560  QESRDSAYVEPKED----YSHDHVDHYASHRDHNHRD 592


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 311,595,406
Number of extensions: 6742771
Number of successful extensions: 22005
Number of sequences better than 10.0: 20
Number of HSP's gapped: 21937
Number of HSP's successfully gapped: 20
Length of query: 685
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 565
Effective length of database: 67,771,039
Effective search space: 38290637035
Effective search space used: 38290637035
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)