ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94d24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055548.1| Oryza sativa (japonica cultivar-group) Os03g0157300 (Os03g0157300) mRNA, complete cds Length = 2101 Score = 763 bits (385), Expect = 0.0 Identities = 592/661 (89%) Strand = Plus / Plus Query: 557 gcagctcacggggctggacgccgtgcgcctcatcagcctcatcgtcaaggcggcggccac 616 |||||| |||||||| ||||| ||||| |||||| | | ||||| ||||||||| | || Sbjct: 665 gcagctgacggggctcgacgcggtgcggctcatctccatgatcgtgaaggcggcgtcgac 724 Query: 617 ggcgcggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcgg 676 ||||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 725 ggcgcggctgcacaagcgcaactgccgccggttcgcgcagcatctgaagctcatcggcgg 784 Query: 677 cctgctggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagccgct 736 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 cctgctggagcagctgcgggtgtcggagctcaagaagtacccggagacgcgggagccgct 844 Query: 737 ggagcagctcgaggacgcgctccgacgcggctacctgctcgtcaactcctgccaggaccg 796 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 845 ggagcagctcgaggacgcgctccgccgcgcctacctgctcgtccactcctgccaggaccg 904 Query: 797 ctccttcctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgca 856 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 905 ctcctacctctacctcctcgccatgggctggaacatcgtgtaccagttccgcaaggcgca 964 Query: 857 gaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcgtcgacaacgcccg 916 || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 965 gaacgagatcgacaactacctccgcctcgtcccgctcatcaccctcgtcgacaacgcccg 1024 Query: 917 cgtgcgggagcgaattgagtacatcgaaagggaccaatgcgaatactctcttgatgagga 976 ||| ||||||| || || ||||| |||||||| ||||| ||||| ||| ||||||| || Sbjct: 1025 cgtcagggagcggatggaatacattgaaagggatcaatgtgaatattcttttgatgatga 1084 Query: 977 agacaaggaggtccaagaagctctgttaaaccctgaccctggcacaaatccttcgatagt 1036 |||||||||||| ||||| ||||||||||||||||| || | ||||||||| || |||| Sbjct: 1085 agacaaggaggttcaagatgctctgttaaaccctgatccaagtacaaatcctacggtagt 1144 Query: 1037 gctgaagaagactctgtcctgttcttatccaaacttgccgtttaatgaagcccttcggaa 1096 ||| |||||||||||||| || ||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1145 gctcaagaagactctgtcatgctcttatccaaacttgccatttaacgaagcgcttcgaaa 1204 Query: 1097 ggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggccca 1156 |||||||||||||||||| || || |||||||| |||||||||||||||||||||| ||| Sbjct: 1205 ggaaagtgagaagctccaagtagaacttcaaagatcacaaagcaacatggatatgggcca 1264 Query: 1157 gtgcgaggttattcatcacctgcttggagttactagaactgtggaaagttctattccaga 1216 || ||||||||||| ||||| || ||||| |||| |||||||| |||||| |||||||| Sbjct: 1265 atgtgaggttattcaacacctcctaggagtgactaaaactgtggcaagttcgattccaga 1324 Query: 1217 g 1217 | Sbjct: 1325 g 1325 Score = 383 bits (193), Expect = e-102 Identities = 379/441 (85%) Strand = Plus / Plus Query: 1274 tgaagacagtgcaaaatcgtatgatgatgactctccaaagaagcaaaaagatgcctatgt 1333 |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 1382 tgaagatagtgcaaaaacatatcatgatgactctccaaagaagcaaaaggatgcctgcac 1441 Query: 1334 tgcaccacggagttcttcacctgttccctacaaccacgatctggtctcgagtacagcatc 1393 ||||||||| |||||| | || | | || ||| ||||||||||| || | || ||| Sbjct: 1442 tgcaccacgaagttctccgccatcttcttatggccatgatctggtctcaagcagaggatc 1501 Query: 1394 atacagtgatgagtggcatgcagatttacttggttgctgttcagagccagctctgtgtct 1453 |||||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| | Sbjct: 1502 atacagcgacgagtggcatgcagatttgcttggttgctgttcagagccatctttgtgttt 1561 Query: 1454 gaagaccttcttttttccatgtggaacattctcaaggattgcttcaatcgccaaaaacaa 1513 || || |||||||| || |||||||||||||||| |||||||||||| || || |||| Sbjct: 1562 gagaacattctttttcccctgtggaacattctcaaagattgcttcaattgcgaagaacag 1621 Query: 1514 gcccatgtcttcgggagaagcctgcaatgatattatggcgtactccctcatattgtcttg 1573 ||||||||| ||| ||||| ||||||||||||||||| || ||||| ||||| || || Sbjct: 1622 gcccatgtcatcgtcggaagcatgcaatgatattatggcatattccctgatattatcctg 1681 Query: 1574 ttgctgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattgcgggagg 1633 || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 1682 ctgttgttacacttgctgtgtgaggagaaagcttcgtcaaaagctaaatattgcgggagg 1741 Query: 1634 gtgctgtgatgatttcctttcacatgtgatgtgctgttgctgtgcgcttgttcaagaatg 1693 ||| |||||||||||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1742 ttgcattgatgatttcctatcacatttgatgtgttgttgctgtgcgcttgttcaagaatg 1801 Query: 1694 gcgggaagtagagattcgtgg 1714 ||||||||| ||||||||||| Sbjct: 1802 gcgggaagttgagattcgtgg 1822
>dbj|AK103362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N07, full insert sequence Length = 2101 Score = 763 bits (385), Expect = 0.0 Identities = 592/661 (89%) Strand = Plus / Plus Query: 557 gcagctcacggggctggacgccgtgcgcctcatcagcctcatcgtcaaggcggcggccac 616 |||||| |||||||| ||||| ||||| |||||| | | ||||| ||||||||| | || Sbjct: 665 gcagctgacggggctcgacgcggtgcggctcatctccatgatcgtgaaggcggcgtcgac 724 Query: 617 ggcgcggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcgg 676 ||||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 725 ggcgcggctgcacaagcgcaactgccgccggttcgcgcagcatctgaagctcatcggcgg 784 Query: 677 cctgctggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagccgct 736 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 cctgctggagcagctgcgggtgtcggagctcaagaagtacccggagacgcgggagccgct 844 Query: 737 ggagcagctcgaggacgcgctccgacgcggctacctgctcgtcaactcctgccaggaccg 796 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 845 ggagcagctcgaggacgcgctccgccgcgcctacctgctcgtccactcctgccaggaccg 904 Query: 797 ctccttcctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgca 856 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 905 ctcctacctctacctcctcgccatgggctggaacatcgtgtaccagttccgcaaggcgca 964 Query: 857 gaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcgtcgacaacgcccg 916 || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 965 gaacgagatcgacaactacctccgcctcgtcccgctcatcaccctcgtcgacaacgcccg 1024 Query: 917 cgtgcgggagcgaattgagtacatcgaaagggaccaatgcgaatactctcttgatgagga 976 ||| ||||||| || || ||||| |||||||| ||||| ||||| ||| ||||||| || Sbjct: 1025 cgtcagggagcggatggaatacattgaaagggatcaatgtgaatattcttttgatgatga 1084 Query: 977 agacaaggaggtccaagaagctctgttaaaccctgaccctggcacaaatccttcgatagt 1036 |||||||||||| ||||| ||||||||||||||||| || | ||||||||| || |||| Sbjct: 1085 agacaaggaggttcaagatgctctgttaaaccctgatccaagtacaaatcctacggtagt 1144 Query: 1037 gctgaagaagactctgtcctgttcttatccaaacttgccgtttaatgaagcccttcggaa 1096 ||| |||||||||||||| || ||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1145 gctcaagaagactctgtcatgctcttatccaaacttgccatttaacgaagcgcttcgaaa 1204 Query: 1097 ggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggccca 1156 |||||||||||||||||| || || |||||||| |||||||||||||||||||||| ||| Sbjct: 1205 ggaaagtgagaagctccaagtagaacttcaaagatcacaaagcaacatggatatgggcca 1264 Query: 1157 gtgcgaggttattcatcacctgcttggagttactagaactgtggaaagttctattccaga 1216 || ||||||||||| ||||| || ||||| |||| |||||||| |||||| |||||||| Sbjct: 1265 atgtgaggttattcaacacctcctaggagtgactaaaactgtggcaagttcgattccaga 1324 Query: 1217 g 1217 | Sbjct: 1325 g 1325 Score = 383 bits (193), Expect = e-102 Identities = 379/441 (85%) Strand = Plus / Plus Query: 1274 tgaagacagtgcaaaatcgtatgatgatgactctccaaagaagcaaaaagatgcctatgt 1333 |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 1382 tgaagatagtgcaaaaacatatcatgatgactctccaaagaagcaaaaggatgcctgcac 1441 Query: 1334 tgcaccacggagttcttcacctgttccctacaaccacgatctggtctcgagtacagcatc 1393 ||||||||| |||||| | || | | || ||| ||||||||||| || | || ||| Sbjct: 1442 tgcaccacgaagttctccgccatcttcttatggccatgatctggtctcaagcagaggatc 1501 Query: 1394 atacagtgatgagtggcatgcagatttacttggttgctgttcagagccagctctgtgtct 1453 |||||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| | Sbjct: 1502 atacagcgacgagtggcatgcagatttgcttggttgctgttcagagccatctttgtgttt 1561 Query: 1454 gaagaccttcttttttccatgtggaacattctcaaggattgcttcaatcgccaaaaacaa 1513 || || |||||||| || |||||||||||||||| |||||||||||| || || |||| Sbjct: 1562 gagaacattctttttcccctgtggaacattctcaaagattgcttcaattgcgaagaacag 1621 Query: 1514 gcccatgtcttcgggagaagcctgcaatgatattatggcgtactccctcatattgtcttg 1573 ||||||||| ||| ||||| ||||||||||||||||| || ||||| ||||| || || Sbjct: 1622 gcccatgtcatcgtcggaagcatgcaatgatattatggcatattccctgatattatcctg 1681 Query: 1574 ttgctgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattgcgggagg 1633 || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 1682 ctgttgttacacttgctgtgtgaggagaaagcttcgtcaaaagctaaatattgcgggagg 1741 Query: 1634 gtgctgtgatgatttcctttcacatgtgatgtgctgttgctgtgcgcttgttcaagaatg 1693 ||| |||||||||||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1742 ttgcattgatgatttcctatcacatttgatgtgttgttgctgtgcgcttgttcaagaatg 1801 Query: 1694 gcgggaagtagagattcgtgg 1714 ||||||||| ||||||||||| Sbjct: 1802 gcgggaagttgagattcgtgg 1822
>dbj|AK063160.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H09, full insert sequence Length = 1879 Score = 763 bits (385), Expect = 0.0 Identities = 592/661 (89%) Strand = Plus / Plus Query: 557 gcagctcacggggctggacgccgtgcgcctcatcagcctcatcgtcaaggcggcggccac 616 |||||| |||||||| ||||| ||||| |||||| | | ||||| ||||||||| | || Sbjct: 441 gcagctgacggggctcgacgcggtgcggctcatctccatgatcgtgaaggcggcgtcgac 500 Query: 617 ggcgcggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcgg 676 ||||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 501 ggcgcggctgcacaagcgcaactgccgccggttcgcgcagcatctgaagctcatcggcgg 560 Query: 677 cctgctggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagccgct 736 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 cctgctggagcagctgcgggtgtcggagctcaagaagtacccggagacgcgggagccgct 620 Query: 737 ggagcagctcgaggacgcgctccgacgcggctacctgctcgtcaactcctgccaggaccg 796 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 621 ggagcagctcgaggacgcgctccgccgcgcctacctgctcgtccactcctgccaggaccg 680 Query: 797 ctccttcctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgca 856 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 681 ctcctacctctacctcctcgccatgggctggaacatcgtgtaccagttccgcaaggcgca 740 Query: 857 gaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcgtcgacaacgcccg 916 || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 741 gaacgagatcgacaactacctccgcctcgtcccgctcatcaccctcgtcgacaacgcccg 800 Query: 917 cgtgcgggagcgaattgagtacatcgaaagggaccaatgcgaatactctcttgatgagga 976 ||| ||||||| || || ||||| |||||||| ||||| ||||| ||| ||||||| || Sbjct: 801 cgtcagggagcggatggaatacattgaaagggatcaatgtgaatattcttttgatgatga 860 Query: 977 agacaaggaggtccaagaagctctgttaaaccctgaccctggcacaaatccttcgatagt 1036 |||||||||||| ||||| ||||||||||||||||| || | ||||||||| || |||| Sbjct: 861 agacaaggaggttcaagatgctctgttaaaccctgatccaagtacaaatcctacggtagt 920 Query: 1037 gctgaagaagactctgtcctgttcttatccaaacttgccgtttaatgaagcccttcggaa 1096 ||| |||||||||||||| || ||||||||||||||||| ||||| ||||| ||||| || Sbjct: 921 gctcaagaagactctgtcatgctcttatccaaacttgccatttaacgaagcgcttcgaaa 980 Query: 1097 ggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggccca 1156 |||||||||||||||||| || || |||||||| |||||||||||||||||||||| ||| Sbjct: 981 ggaaagtgagaagctccaagtagaacttcaaagatcacaaagcaacatggatatgggcca 1040 Query: 1157 gtgcgaggttattcatcacctgcttggagttactagaactgtggaaagttctattccaga 1216 || ||||||||||| ||||| || ||||| |||| |||||||| |||||| |||||||| Sbjct: 1041 atgtgaggttattcaacacctcctaggagtgactaaaactgtggcaagttcgattccaga 1100 Query: 1217 g 1217 | Sbjct: 1101 g 1101 Score = 375 bits (189), Expect = e-100 Identities = 378/441 (85%) Strand = Plus / Plus Query: 1274 tgaagacagtgcaaaatcgtatgatgatgactctccaaagaagcaaaaagatgcctatgt 1333 |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 1158 tgaagatagtgcaaaaacatatcatgatgactctccaaagaagcaaaaggatgcctgcac 1217 Query: 1334 tgcaccacggagttcttcacctgttccctacaaccacgatctggtctcgagtacagcatc 1393 ||||||||| |||||| | || | | || ||| ||||||||||| || | || ||| Sbjct: 1218 tgcaccacgaagttctccgccatcttcttatggccatgatctggtctcaagcagaggatc 1277 Query: 1394 atacagtgatgagtggcatgcagatttacttggttgctgttcagagccagctctgtgtct 1453 |||||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| | Sbjct: 1278 atacagcgacgagtggcatgcagatttgcttggttgctgttcagagccatctttgtgttt 1337 Query: 1454 gaagaccttcttttttccatgtggaacattctcaaggattgcttcaatcgccaaaaacaa 1513 || || |||||||| || |||||||||||||||| |||||||||||| || || |||| Sbjct: 1338 gagaacattctttttcccctgtggaacattctcaaagattgcttcaattgcgaagaacag 1397 Query: 1514 gcccatgtcttcgggagaagcctgcaatgatattatggcgtactccctcatattgtcttg 1573 ||||||||| ||| ||||| ||||||||||||||||| || ||||| ||||| || || Sbjct: 1398 gcccatgtcatcgtcggaagcatgcaatgatattatggcatattccctgatattatcctg 1457 Query: 1574 ttgctgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattgcgggagg 1633 || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 1458 ctgttgttacacttgctgtgtgaggagaaagcttcgtcaaaagctaaatattgcgggagg 1517 Query: 1634 gtgctgtgatgatttcctttcacatgtgatgtgctgttgctgtgcgcttgttcaagaatg 1693 ||| |||||||||||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1518 ttgcattgatgatttcctatcacatttgatgtgttgttgctgtgcgcttgttcaagaatg 1577 Query: 1694 gcgggaagtagagattcgtgg 1714 |||| |||| ||||||||||| Sbjct: 1578 gcggaaagttgagattcgtgg 1598
>emb|CT830813.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA054L20, full insert sequence Length = 1349 Score = 755 bits (381), Expect = 0.0 Identities = 591/661 (89%) Strand = Plus / Plus Query: 557 gcagctcacggggctggacgccgtgcgcctcatcagcctcatcgtcaaggcggcggccac 616 |||||| |||||||| ||||| ||||| |||||| | | ||||| ||||||||| | || Sbjct: 528 gcagctgacggggctcgacgcggtgcggctcatctccatgatcgtgaaggcggcgtcgac 587 Query: 617 ggcgcggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcgg 676 ||||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 588 ggcgcggctgcacaagcgcaactgccgccggttcgcgcagcatctgaagctcatcggcgg 647 Query: 677 cctgctggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagccgct 736 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 648 cctgctggagcagctgcgggtgtcggagctcaagaagtacccggagacgagggagccgct 707 Query: 737 ggagcagctcgaggacgcgctccgacgcggctacctgctcgtcaactcctgccaggaccg 796 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 708 ggagcagctcgaggacgcgctccgccgcgcctacctgctcgtccactcctgccaggaccg 767 Query: 797 ctccttcctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgca 856 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 768 ctcctacctctacctcctcgccatgggctggaacatcgtgtaccagttccgcaaggcgca 827 Query: 857 gaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcgtcgacaacgcccg 916 || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 828 gaacgagatcgacaactacctccgcctcgtcccgctcatcaccctcgtcgacaacgcccg 887 Query: 917 cgtgcgggagcgaattgagtacatcgaaagggaccaatgcgaatactctcttgatgagga 976 ||| ||||||| || || ||||| |||||||| ||||| ||||| ||| ||||||| || Sbjct: 888 cgtcagggagcggatggaatacattgaaagggatcaatgtgaatattcttttgatgatga 947 Query: 977 agacaaggaggtccaagaagctctgttaaaccctgaccctggcacaaatccttcgatagt 1036 |||||||||||| ||||| ||||||||||||||||| || | ||||||||| || |||| Sbjct: 948 agacaaggaggttcaagatgctctgttaaaccctgatccaagtacaaatcctacggtagt 1007 Query: 1037 gctgaagaagactctgtcctgttcttatccaaacttgccgtttaatgaagcccttcggaa 1096 ||| |||||||||||||| || ||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1008 gctcaagaagactctgtcatgctcttatccaaacttgccatttaacgaagcgcttcgaaa 1067 Query: 1097 ggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggccca 1156 |||||||||||||||||| || || |||||||| |||||||||||||||||||||| ||| Sbjct: 1068 ggaaagtgagaagctccaagtagaacttcaaagatcacaaagcaacatggatatgggcca 1127 Query: 1157 gtgcgaggttattcatcacctgcttggagttactagaactgtggaaagttctattccaga 1216 || ||||||||||| ||||| || ||||| |||| |||||||| |||||| |||||||| Sbjct: 1128 atgtgaggttattcaacacctcctaggagtgactaaaactgtggcaagttcgattccaga 1187 Query: 1217 g 1217 | Sbjct: 1188 g 1188 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1274 tgaagacagtgcaaaatcgtatgatgatgactctccaaagaagcaaaaagatgcct 1329 |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 1245 tgaagatagtgcaaaaacatatcatgatgactctccaaagaagcaaaaggatgcct 1300
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 490 bits (247), Expect = e-134 Identities = 334/363 (92%) Strand = Plus / Minus Query: 557 gcagctcacggggctggacgccgtgcgcctcatcagcctcatcgtcaaggcggcggccac 616 |||||| |||||||| ||||| ||||| |||||| | | ||||| ||||||||| | || Sbjct: 44862 gcagctgacggggctcgacgcggtgcggctcatctccatgatcgtgaaggcggcgtcgac 44803 Query: 617 ggcgcggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcgg 676 ||||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 44802 ggcgcggctgcacaagcgcaactgccgccggttcgcgcagcatctgaagctcatcggcgg 44743 Query: 677 cctgctggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagccgct 736 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44742 cctgctggagcagctgcgggtgtcggagctcaagaagtacccggagacgcgggagccgct 44683 Query: 737 ggagcagctcgaggacgcgctccgacgcggctacctgctcgtcaactcctgccaggaccg 796 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 44682 ggagcagctcgaggacgcgctccgccgcgcctacctgctcgtccactcctgccaggaccg 44623 Query: 797 ctccttcctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgca 856 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 44622 ctcctacctctacctcctcgccatgggctggaacatcgtgtaccagttccgcaaggcgca 44563 Query: 857 gaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcgtcgacaacgcccg 916 || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 44562 gaacgagatcgacaactacctccgcctcgtcccgctcatcaccctcgtcgacaacgcccg 44503 Query: 917 cgt 919 ||| Sbjct: 44502 cgt 44500 Score = 283 bits (143), Expect = 1e-72 Identities = 257/295 (87%) Strand = Plus / Minus Query: 923 ggagcgaattgagtacatcgaaagggaccaatgcgaatactctcttgatgaggaagacaa 982 |||||| || || ||||| |||||||| ||||| ||||| ||| ||||||| |||||||| Sbjct: 43959 ggagcggatggaatacattgaaagggatcaatgtgaatattcttttgatgatgaagacaa 43900 Query: 983 ggaggtccaagaagctctgttaaaccctgaccctggcacaaatccttcgatagtgctgaa 1042 |||||| ||||| ||||||||||||||||| || | ||||||||| || ||||||| || Sbjct: 43899 ggaggttcaagatgctctgttaaaccctgatccaagtacaaatcctacggtagtgctcaa 43840 Query: 1043 gaagactctgtcctgttcttatccaaacttgccgtttaatgaagcccttcggaaggaaag 1102 |||||||||||| || ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 43839 gaagactctgtcatgctcttatccaaacttgccatttaacgaagcgcttcgaaaggaaag 43780 Query: 1103 tgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggcccagtgcga 1162 |||||||||||| || || |||||||| |||||||||||||||||||||| ||| || || Sbjct: 43779 tgagaagctccaagtagaacttcaaagatcacaaagcaacatggatatgggccaatgtga 43720 Query: 1163 ggttattcatcacctgcttggagttactagaactgtggaaagttctattccagag 1217 ||||||||| ||||| || ||||| |||| |||||||| |||||| ||||||||| Sbjct: 43719 ggttattcaacacctcctaggagtgactaaaactgtggcaagttcgattccagag 43665 Score = 119 bits (60), Expect = 4e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 1530 gaagcctgcaatgatattatggcgtactccctcatattgtcttgttgctgttacacttgc 1589 ||||| ||||||||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct: 41931 gaagcatgcaatgatattatggcatattccctgatattatcctgctgttgttacacttgc 41872 Query: 1590 tgtgtaaggagaaagcttcgtcaaaggctaaatattgcgg 1629 ||||| ||||||||||||||||||| |||||||||||||| Sbjct: 41871 tgtgtgaggagaaagcttcgtcaaaagctaaatattgcgg 41832 Score = 117 bits (59), Expect = 2e-22 Identities = 71/75 (94%) Strand = Plus / Minus Query: 1640 tgatgatttcctttcacatgtgatgtgctgttgctgtgcgcttgttcaagaatggcggga 1699 |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 41438 tgatgatttcctatcacatttgatgtgttgttgctgtgcgcttgttcaagaatggcggga 41379 Query: 1700 agtagagattcgtgg 1714 ||| ||||||||||| Sbjct: 41378 agttgagattcgtgg 41364 Score = 89.7 bits (45), Expect = 4e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 1371 gatctggtctcgagtacagcatcatacagtgatgagtggcatgcagatttacttggttgc 1430 ||||||||||| || | || ||||||||| || ||||||||||||||||| ||||||||| Sbjct: 43175 gatctggtctcaagcagaggatcatacagcgacgagtggcatgcagatttgcttggttgc 43116 Query: 1431 tgttcagagccagctctgtgt 1451 |||||||||||| || ||||| Sbjct: 43115 tgttcagagccatctttgtgt 43095 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 1274 tgaagacagtgcaaaatcgtatgatgatgactctccaaagaagcaaaaagatgcct 1329 |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 43608 tgaagatagtgcaaaaacatatcatgatgactctccaaagaagcaaaaggatgcct 43553 Score = 65.9 bits (33), Expect = 5e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 1461 ttcttttttccatgtggaacattctcaaggattgcttcaatcgccaaaaacaagcccatg 1520 |||||||| || |||||||||||||||| |||||||||||| || || |||| ||||||| Sbjct: 42369 ttctttttcccctgtggaacattctcaaagattgcttcaattgcgaagaacaggcccatg 42310 Query: 1521 t 1521 | Sbjct: 42309 t 42309
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 490 bits (247), Expect = e-134 Identities = 334/363 (92%) Strand = Plus / Plus Query: 557 gcagctcacggggctggacgccgtgcgcctcatcagcctcatcgtcaaggcggcggccac 616 |||||| |||||||| ||||| ||||| |||||| | | ||||| ||||||||| | || Sbjct: 3051510 gcagctgacggggctcgacgcggtgcggctcatctccatgatcgtgaaggcggcgtcgac 3051569 Query: 617 ggcgcggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcgg 676 ||||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 3051570 ggcgcggctgcacaagcgcaactgccgccggttcgcgcagcatctgaagctcatcggcgg 3051629 Query: 677 cctgctggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagccgct 736 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051630 cctgctggagcagctgcgggtgtcggagctcaagaagtacccggagacgcgggagccgct 3051689 Query: 737 ggagcagctcgaggacgcgctccgacgcggctacctgctcgtcaactcctgccaggaccg 796 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 3051690 ggagcagctcgaggacgcgctccgccgcgcctacctgctcgtccactcctgccaggaccg 3051749 Query: 797 ctccttcctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgca 856 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 3051750 ctcctacctctacctcctcgccatgggctggaacatcgtgtaccagttccgcaaggcgca 3051809 Query: 857 gaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcgtcgacaacgcccg 916 || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 3051810 gaacgagatcgacaactacctccgcctcgtcccgctcatcaccctcgtcgacaacgcccg 3051869 Query: 917 cgt 919 ||| Sbjct: 3051870 cgt 3051872 Score = 283 bits (143), Expect = 1e-72 Identities = 257/295 (87%) Strand = Plus / Plus Query: 923 ggagcgaattgagtacatcgaaagggaccaatgcgaatactctcttgatgaggaagacaa 982 |||||| || || ||||| |||||||| ||||| ||||| ||| ||||||| |||||||| Sbjct: 3052413 ggagcggatggaatacattgaaagggatcaatgtgaatattcttttgatgatgaagacaa 3052472 Query: 983 ggaggtccaagaagctctgttaaaccctgaccctggcacaaatccttcgatagtgctgaa 1042 |||||| ||||| ||||||||||||||||| || | ||||||||| || ||||||| || Sbjct: 3052473 ggaggttcaagatgctctgttaaaccctgatccaagtacaaatcctacggtagtgctcaa 3052532 Query: 1043 gaagactctgtcctgttcttatccaaacttgccgtttaatgaagcccttcggaaggaaag 1102 |||||||||||| || ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 3052533 gaagactctgtcatgctcttatccaaacttgccatttaacgaagcgcttcgaaaggaaag 3052592 Query: 1103 tgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggcccagtgcga 1162 |||||||||||| || || |||||||| |||||||||||||||||||||| ||| || || Sbjct: 3052593 tgagaagctccaagtagaacttcaaagatcacaaagcaacatggatatgggccaatgtga 3052652 Query: 1163 ggttattcatcacctgcttggagttactagaactgtggaaagttctattccagag 1217 ||||||||| ||||| || ||||| |||| |||||||| |||||| ||||||||| Sbjct: 3052653 ggttattcaacacctcctaggagtgactaaaactgtggcaagttcgattccagag 3052707 Score = 119 bits (60), Expect = 4e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 1530 gaagcctgcaatgatattatggcgtactccctcatattgtcttgttgctgttacacttgc 1589 ||||| ||||||||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct: 3054441 gaagcatgcaatgatattatggcatattccctgatattatcctgctgttgttacacttgc 3054500 Query: 1590 tgtgtaaggagaaagcttcgtcaaaggctaaatattgcgg 1629 ||||| ||||||||||||||||||| |||||||||||||| Sbjct: 3054501 tgtgtgaggagaaagcttcgtcaaaagctaaatattgcgg 3054540 Score = 117 bits (59), Expect = 2e-22 Identities = 71/75 (94%) Strand = Plus / Plus Query: 1640 tgatgatttcctttcacatgtgatgtgctgttgctgtgcgcttgttcaagaatggcggga 1699 |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 3054934 tgatgatttcctatcacatttgatgtgttgttgctgtgcgcttgttcaagaatggcggga 3054993 Query: 1700 agtagagattcgtgg 1714 ||| ||||||||||| Sbjct: 3054994 agttgagattcgtgg 3055008 Score = 89.7 bits (45), Expect = 4e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 1371 gatctggtctcgagtacagcatcatacagtgatgagtggcatgcagatttacttggttgc 1430 ||||||||||| || | || ||||||||| || ||||||||||||||||| ||||||||| Sbjct: 3053197 gatctggtctcaagcagaggatcatacagcgacgagtggcatgcagatttgcttggttgc 3053256 Query: 1431 tgttcagagccagctctgtgt 1451 |||||||||||| || ||||| Sbjct: 3053257 tgttcagagccatctttgtgt 3053277 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1274 tgaagacagtgcaaaatcgtatgatgatgactctccaaagaagcaaaaagatgcct 1329 |||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 3052764 tgaagatagtgcaaaaacatatcatgatgactctccaaagaagcaaaaggatgcct 3052819 Score = 65.9 bits (33), Expect = 5e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 1461 ttcttttttccatgtggaacattctcaaggattgcttcaatcgccaaaaacaagcccatg 1520 |||||||| || |||||||||||||||| |||||||||||| || || |||| ||||||| Sbjct: 3054003 ttctttttcccctgtggaacattctcaaagattgcttcaattgcgaagaacaggcccatg 3054062 Query: 1521 t 1521 | Sbjct: 3054063 t 3054063
>gb|AY105913.1| Zea mays PCO070246 mRNA sequence Length = 1089 Score = 311 bits (157), Expect = 5e-81 Identities = 295/341 (86%) Strand = Plus / Plus Query: 1371 gatctggtctcgagtacagcatcatacagtgatgagtggcatgcagatttacttggttgc 1430 ||||| ||||| |||| || ||| ||||| || || |||||||||||||||||||| ||| Sbjct: 416 gatcttgtctcaagtagaggatcgtacagcgacgaatggcatgcagatttacttggctgc 475 Query: 1431 tgttcagagccagctctgtgtctgaagaccttcttttttccatgtggaacattctcaagg 1490 |||||||| || ||| ||||| |||||||||| || || || |||||||| ||||| || Sbjct: 476 tgttcagaaccggctttgtgtttgaagaccttgttcttcccctgtggaaccttctcgaga 535 Query: 1491 attgcttcaatcgccaaaaacaagcccatgtcttcgggagaagcctgcaatgatattatg 1550 ||||||||||||||||| ||| ||| |||||||| || || || ||||||||||||||| Sbjct: 536 attgcttcaatcgccaaggacaggccaatgtcttctggggaggcttgcaatgatattatg 595 Query: 1551 gcgtactccctcatattgtcttgttgctgttacacttgctgtgtaaggagaaagcttcgt 1610 ||||||||||| |||||||| || |||||||| || |||||||||||||||||||||||| Sbjct: 596 gcgtactccctaatattgtcctgctgctgttatacatgctgtgtaaggagaaagcttcgt 655 Query: 1611 caaaggctaaatattgcgggagggtgctgtgatgatttcctttcacatgtgatgtgctgt 1670 |||| | | | ||||||||||| |||||||| || |||||||||||| || |||| ||| Sbjct: 656 caaaagttggacattgcgggaggctgctgtgacgacttcctttcacatctgctgtgttgt 715 Query: 1671 tgctgtgcgcttgttcaagaatggcgggaagtagagattcg 1711 ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 716 tgctgcgcgcttgttcaagaatggcgggaagttgagattcg 756 Score = 141 bits (71), Expect = 1e-29 Identities = 164/195 (84%) Strand = Plus / Plus Query: 1008 cctgaccctggcacaaatccttcgatagtgctgaagaagactctgtcctgttcttatcca 1067 ||||||||| || | |||||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 23 cctgacccttgctcgaatcctacaattgtgctcaagaagactctctcatgttcctatcca 82 Query: 1068 aacttgccgtttaatgaagcccttcggaaggaaagtgagaagctccaggtggagcttcaa 1127 ||||| || || ||||| ||||| || ||||||||||||||||| ||||| || |||||| Sbjct: 83 aacttacctttcaatgaggccctccgaaaggaaagtgagaagcttcaggttgaacttcaa 142 Query: 1128 aggtcacaaagcaacatggatatggcccagtgcgaggttattcatcacctgcttggagtt 1187 |||||||| |||||||||||| ||| ||| |||||||| || |||||||||||||| Sbjct: 143 aggtcacagagcaacatggatctgggttcgtgtgaggttatccaacacctgcttggagta 202 Query: 1188 actagaactgtggaa 1202 || | |||||||||| Sbjct: 203 accaaaactgtggaa 217
>gb|DQ246179.1| Zea mays clone 12944 mRNA sequence Length = 809 Score = 309 bits (156), Expect = 2e-80 Identities = 297/344 (86%) Strand = Plus / Plus Query: 1371 gatctggtctcgagtacagcatcatacagtgatgagtggcatgcagatttacttggttgc 1430 ||||| ||||| |||| || ||| ||||| || || |||||||||||||||||||| ||| Sbjct: 138 gatcttgtctcaagtagaggatcgtacagcgacgaatggcatgcagatttacttggctgc 197 Query: 1431 tgttcagagccagctctgtgtctgaagaccttcttttttccatgtggaacattctcaagg 1490 |||||||| || ||| ||||| |||||||||| || || || |||||||| ||||| || Sbjct: 198 tgttcagaaccggctttgtgtttgaagaccttgttcttcccctgtggaaccttctcgaga 257 Query: 1491 attgcttcaatcgccaaaaacaagcccatgtcttcgggagaagcctgcaatgatattatg 1550 ||||||||||||||||| ||| ||| |||||||| ||||| || ||||||||||||||| Sbjct: 258 attgcttcaatcgccaaggacaggccaatgtcttctggagaggcttgcaatgatattatg 317 Query: 1551 gcgtactccctcatattgtcttgttgctgttacacttgctgtgtaaggagaaagcttcgt 1610 || |||||||| |||||||| || |||||||| || |||||||||||||| ||||||||| Sbjct: 318 gcttactccctaatattgtcctgctgctgttatacatgctgtgtaaggaggaagcttcgt 377 Query: 1611 caaaggctaaatattgcgggagggtgctgtgatgatttcctttcacatgtgatgtgctgt 1670 |||| | | | ||||||||||| |||||||| || |||||||||||| || |||| ||| Sbjct: 378 caaaagttggacattgcgggaggctgctgtgacgacttcctttcacatctgctgtgttgt 437 Query: 1671 tgctgtgcgcttgttcaagaatggcgggaagtagagattcgtgg 1714 ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 438 tgctgcgcgcttgttcaagaatggcgggaagttgagattcgtgg 481
>gb|AC189569.1| Brassica rapa subsp. pekinensis clone KBrH009I12, complete sequence Length = 131398 Score = 63.9 bits (32), Expect = 2e-06 Identities = 92/112 (82%) Strand = Plus / Minus Query: 622 ggatgcacaagagcaactgccgccgcttcgcgcagcacctcaagctcatcggcggcctgc 681 |||||||||||| |||||||||| ||||| ||||||||||| ||||||||| | ||| Sbjct: 34243 ggatgcacaagaagaactgccgccagttcgctcagcacctcaaactcatcggcaacttgc 34184 Query: 682 tggagcagctccgggtgtcggagctcaagaagtacccggagacgcgggagcc 733 | ||||||||| | | |||||| | |||||||| || ||||| || ||||| Sbjct: 34183 tcgagcagctcaagatctcggagatgaagaagtatcccgagactcgcgagcc 34132 Score = 58.0 bits (29), Expect = 1e-04 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1572 tgttgctgttacacttgctgtgtaaggag 1600 ||||||||||||||||||||||||||||| Sbjct: 32208 tgttgctgttacacttgctgtgtaaggag 32180 Score = 46.1 bits (23), Expect = 0.50 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1660 tgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtgg 1714 ||||||| ||||||||||| || || |||||| ||| ||||| ||||||||||| Sbjct: 31920 tgatgtgttgttgctgtgctctagtccaagaactgcgagaagttgagattcgtgg 31866
>emb|CT827917.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106A06, full insert sequence Length = 1062 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 715 acccggagacgcgggagccgctggagcagctcgaggacgcgctcc 759 |||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 296 acccggagacgcggcggccgctggagcagctggacgacgcgctcc 340
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Minus Query: 1572 tgttgctgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattgcg 1628 ||||||||||||||||||||| | |||||| ||| |||||| ||||||||||||| Sbjct: 12108231 tgttgctgttacacttgctgtatcgtgagaaaactttgtcaaaagctaaatattgcg 12108175
>emb|AL732641.5|CNS08C9G Oryza sativa chromosome 12, . BAC OSJNBb0049G07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92432 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 1572 tgttgctgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattgcg 1628 ||||||||||||||||||||| | |||||| ||| |||||| ||||||||||||| Sbjct: 39576 tgttgctgttacacttgctgtatcgtgagaaaactttgtcaaaagctaaatattgcg 39632
>gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete sequence Length = 107180 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 1033 tagtgctgaagaagactctgtcctgttcttatccaaactt 1072 ||||||||||||| ||||| || ||||||||||||||||| Sbjct: 73419 tagtgctgaagaaaactctttcatgttcttatccaaactt 73380
>emb|CT988636.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 496 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 1094 gaaggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggc 1153 |||||| | ||||||||| || |||| |||||| ||||||||| |||||||||||| Sbjct: 244 gaaggagaatgagaagcttcaaatggaacttcaacggtcacaaacaaacatggatatgaa 303 Query: 1154 ccagtgcgaggttattca 1171 |||||| || |||||||| Sbjct: 304 ccagtgtgaagttattca 321
>emb|CT988512.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 496 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Minus Query: 1094 gaaggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggc 1153 |||||| | ||||||||| || |||| |||||| ||||||||| |||||||||||| Sbjct: 253 gaaggagaatgagaagcttcaaatggaacttcaacggtcacaaacaaacatggatatgaa 194 Query: 1154 ccagtgcgaggttattca 1171 |||||| || |||||||| Sbjct: 193 ccagtgtgaagttattca 176
>emb|CT988333.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 496 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Minus Query: 1094 gaaggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggc 1153 |||||| | ||||||||| || |||| |||||| ||||||||| |||||||||||| Sbjct: 253 gaaggagaatgagaagcttcaaatggaacttcaacggtcacaaacaaacatggatatgaa 194 Query: 1154 ccagtgcgaggttattca 1171 |||||| || |||||||| Sbjct: 193 ccagtgtgaagttattca 176
>emb|CT988395.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 496 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 1094 gaaggaaagtgagaagctccaggtggagcttcaaaggtcacaaagcaacatggatatggc 1153 |||||| | ||||||||| || |||| |||||| ||||||||| |||||||||||| Sbjct: 244 gaaggagaatgagaagcttcaaatggaacttcaacggtcacaaacaaacatggatatgaa 303 Query: 1154 ccagtgcgaggttattca 1171 |||||| || |||||||| Sbjct: 304 ccagtgtgaagttattca 321
>emb|CT827932.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108G07, full insert sequence Length = 2290 Score = 50.1 bits (25), Expect = 0.032 Identities = 37/41 (90%) Strand = Plus / Plus Query: 717 ccggagacgcgggagccgctggagcagctcgaggacgcgct 757 |||||||||||| ||||||||||||||| || |||||||| Sbjct: 413 ccggagacgcggcggccgctggagcagctggacgacgcgct 453
>ref|NM_179172.2| Arabidopsis thaliana unknown protein (AT4G35920) mRNA, complete cds Length = 1829 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1497 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1556 Query: 1716 gcata 1720 ||||| Sbjct: 1557 gcata 1561
>ref|NM_119759.2| Arabidopsis thaliana unknown protein (AT4G35920) mRNA, complete cds Length = 1898 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1566 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1625 Query: 1716 gcata 1720 ||||| Sbjct: 1626 gcata 1630
>ref|NM_179173.3| Arabidopsis thaliana unknown protein (AT4G35920) mRNA, complete cds Length = 1880 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1443 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1502 Query: 1716 gcata 1720 ||||| Sbjct: 1503 gcata 1507
>gb|AY136293.1| Arabidopsis thaliana putative protein (At4g35920) mRNA, complete cds Length = 1873 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1555 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1614 Query: 1716 gcata 1720 ||||| Sbjct: 1615 gcata 1619
>gb|AY133604.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, complete cds Length = 1323 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1147 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1206 Query: 1716 gcata 1720 ||||| Sbjct: 1207 gcata 1211
>gb|AF367322.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, complete cds Length = 1865 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1565 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1624 Query: 1716 gcata 1720 ||||| Sbjct: 1625 gcata 1629
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 84066 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 84007 Query: 1716 gcata 1720 ||||| Sbjct: 84006 gcata 84002
>emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BAC clone T19K4 (ESSAII project) Length = 106007 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 18797 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 18738 Query: 1716 gcata 1720 ||||| Sbjct: 18737 gcata 18733
>gb|BT003430.1| Arabidopsis thaliana putative protein (At4g35920) mRNA, complete cds Length = 1381 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1147 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1206 Query: 1716 gcata 1720 ||||| Sbjct: 1207 gcata 1211
>emb|BX826751.1|CNS0A435 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1824 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 1385 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 1444 Query: 1716 gcata 1720 ||||| Sbjct: 1445 gcata 1449
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1656 catgtgatgtgctgttgctgtgcgcttgttcaagaatggcgggaagtagagattcgtggt 1715 ||||| ||||| ||||||||||| ||||| |||||| | | ||||| ||||||||||| Sbjct: 75870 catgtaatgtgttgttgctgtgcccttgtacaagaactgagagaagttgagattcgtggg 75811 Query: 1716 gcata 1720 ||||| Sbjct: 75810 gcata 75806
>emb|CT982804.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 319 Score = 46.1 bits (23), Expect = 0.50 Identities = 56/67 (83%) Strand = Plus / Minus Query: 803 cctctacctcctcgccatgggctggaacatcgtctaccgcttccgcaccgcgcagaccga 862 ||||||||| || |||||||| ||||||||||| |||| ||| | | ||||||| ||| Sbjct: 267 cctctacctgctggccatggggtggaacatcgtgtaccagttcaggagggcgcagaacga 208 Query: 863 gatcgac 869 ||||||| Sbjct: 207 gatcgac 201
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.50 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1529 agaagcctgcaatgatattatggcgtactcc 1559 |||||| ||||||||||||||||| |||||| Sbjct: 10842082 agaagcatgcaatgatattatggcatactcc 10842112
>gb|AF295359.1|AF295359 Paracoccus pantotrophus bicyclomycin resistance BcrA (bcrA) gene, partial cds; methyltransferase Ada (adaA), transcriptional activator NarR (narR), and NarK (narK) genes, complete cds; and large subunit of nitrate reductase NarG (narG) gene, partial cds Length = 7000 Score = 46.1 bits (23), Expect = 0.50 Identities = 23/23 (100%) Strand = Plus / Plus Query: 604 aggcggcggccacggcgcggatg 626 ||||||||||||||||||||||| Sbjct: 1213 aggcggcggccacggcgcggatg 1235
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 46.1 bits (23), Expect = 0.50 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1529 agaagcctgcaatgatattatggcgtactcc 1559 |||||| ||||||||||||||||| |||||| Sbjct: 65805 agaagcatgcaatgatattatggcatactcc 65835
>dbj|AK243455.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100070J20, full insert sequence Length = 1738 Score = 44.1 bits (22), Expect = 2.0 Identities = 55/66 (83%) Strand = Plus / Plus Query: 844 tccgcaccgcgcagaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcg 903 ||||| |||||||| ||||||||||| ||| |||||||| | || |||||| | |||| Sbjct: 412 tccgcgccgcgcagcacgagatcgacatgtacatccgcctcatccctctcatcgccctcg 471 Query: 904 tcgaca 909 |||||| Sbjct: 472 tcgaca 477
>ref|NM_001064949.1| Oryza sativa (japonica cultivar-group) Os06g0689600 (Os06g0689600) mRNA, complete cds Length = 2040 Score = 44.1 bits (22), Expect = 2.0 Identities = 55/66 (83%) Strand = Plus / Plus Query: 844 tccgcaccgcgcagaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcg 903 ||||| |||||||| ||||||||||| ||| |||||||| | || |||||| | |||| Sbjct: 341 tccgcgccgcgcagcacgagatcgacatgtacatccgcctcatccctctcatcgccctcg 400 Query: 904 tcgaca 909 |||||| Sbjct: 401 tcgaca 406
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 ctgcgcccgccgccgccgcaca 348 |||||||||||||||||||||| Sbjct: 5230937 ctgcgcccgccgccgccgcaca 5230958
>gb|AC146008.3| Pan troglodytes BAC clone RP43-13N15 from 7, complete sequence Length = 151195 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1471 catgtggaacattctcaaggat 1492 |||||||||||||||||||||| Sbjct: 122163 catgtggaacattctcaaggat 122184
>gb|AC004852.2| Homo sapiens PAC clone RP4-668E10 from 7, complete sequence Length = 158541 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1471 catgtggaacattctcaaggat 1492 |||||||||||||||||||||| Sbjct: 129146 catgtggaacattctcaaggat 129125
>gb|AC092984.3| Homo sapiens 3 BAC RP11-113N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116831 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1971 tagaattcagttaatttgtaaa 1992 |||||||||||||||||||||| Sbjct: 46562 tagaattcagttaatttgtaaa 46583
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 2.0 Identities = 55/66 (83%) Strand = Plus / Minus Query: 844 tccgcaccgcgcagaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcg 903 ||||| |||||||| ||||||||||| ||| |||||||| | || |||||| | |||| Sbjct: 28373344 tccgcgccgcgcagcacgagatcgacatgtacatccgcctcatccctctcatcgccctcg 28373285 Query: 904 tcgaca 909 |||||| Sbjct: 28373284 tcgaca 28373279
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 671 cggcggcctgctggagcagctccggg 696 ||||||||||||||||| |||||||| Sbjct: 2282549 cggcggcctgctggagccgctccggg 2282524
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 793 accgctccttcctctacctcctcgcc 818 |||||||||||||| ||||||||||| Sbjct: 291673 accgctccttcctcgacctcctcgcc 291648
>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE Length = 116729 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1034 agtgctgaagaagactctgtcctgttctta 1063 |||||||||||| ||||| ||||||||||| Sbjct: 100616 agtgctgaagaaaactctctcctgttctta 100645 Score = 42.1 bits (21), Expect = 7.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 1453 tgaagaccttcttttttccatgtggaacattctcaaggattgcttcaatcgccaaaaaca 1512 ||||||| ||||| | ||| ||||||||||| |||| ||||||| || | | ||||||| Sbjct: 101857 tgaagacattcttctatccttgtggaacattttcaaagattgctacagttgtaaaaaaca 101916 Query: 1513 agcccatgt 1521 |||||||| Sbjct: 101917 ggcccatgt 101925
>gb|AC146009.3| Pan troglodytes BAC clone RP43-13O12 from chromosome 7, complete sequence Length = 169801 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1471 catgtggaacattctcaaggat 1492 |||||||||||||||||||||| Sbjct: 112013 catgtggaacattctcaaggat 112034
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 44.1 bits (22), Expect = 2.0 Identities = 55/66 (83%) Strand = Plus / Minus Query: 844 tccgcaccgcgcagaccgagatcgacaactacctccgcctcgtgccgctcatcacgctcg 903 ||||| |||||||| ||||||||||| ||| |||||||| | || |||||| | |||| Sbjct: 85922 tccgcgccgcgcagcacgagatcgacatgtacatccgcctcatccctctcatcgccctcg 85863 Query: 904 tcgaca 909 |||||| Sbjct: 85862 tcgaca 85857
>emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in linkage group 20, complete sequence Length = 185926 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1274 tgaagacagtgcaaaatcgtatgatg 1299 |||| ||||||||||||||||||||| Sbjct: 93295 tgaaaacagtgcaaaatcgtatgatg 93270
>emb|CT828518.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA024N07, full insert sequence Length = 635 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 cctcatcagcctcatcgtcaa 604 ||||||||||||||||||||| Sbjct: 301 cctcatcagcctcatcgtcaa 281
>gb|DQ885223.1| Streptomyces violaceusniger meridamycin gene cluster, complete sequence Length = 91893 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 844 tccgcaccgcgcagaccgaga 864 ||||||||||||||||||||| Sbjct: 43703 tccgcaccgcgcagaccgaga 43723
>ref|NM_001061670.1| Oryza sativa (japonica cultivar-group) Os05g0301600 (Os05g0301600) mRNA, complete cds Length = 1098 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 cctcatcagcctcatcgtcaa 604 ||||||||||||||||||||| Sbjct: 650 cctcatcagcctcatcgtcaa 630
>ref|NM_001049710.1| Oryza sativa (japonica cultivar-group) Os01g0511800 (Os01g0511800) mRNA, partial cds Length = 3074 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 658 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 706
>gb|AC190398.1| Gallus gallus BAC clone CH261-55O13 from chromosome z, complete sequence Length = 204942 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1383 agtacagcatcatacagtgatgagtggca 1411 |||||||||||||||||| |||| ||||| Sbjct: 18781 agtacagcatcatacagttatgaatggca 18809
>gb|AC188693.3| Gallus gallus BAC clone CH261-175O22 from chromosome z, complete sequence Length = 184252 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1900 aacattactgtttgtgttgtattta 1924 ||||||| ||||||||||||||||| Sbjct: 155784 aacattagtgtttgtgttgtattta 155808
>gb|AC188821.3| Gallus gallus BAC clone CH261-176F11 from chromosome z, complete sequence Length = 211810 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1900 aacattactgtttgtgttgtattta 1924 ||||||| ||||||||||||||||| Sbjct: 4020 aacattagtgtttgtgttgtattta 4044
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 gtcgacgagggctgccgcgccggcg 305 |||||||||||||||||| |||||| Sbjct: 1464326 gtcgacgagggctgccgcaccggcg 1464350
>ref|XM_001094126.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 1 (LOC702135), mRNA Length = 7566 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 2865 gatgaggaagacaaggaggtc 2885
>ref|XM_001094248.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 2 (LOC702135), mRNA Length = 7568 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 2867 gatgaggaagacaaggaggtc 2887
>ref|XM_001094976.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 8 (LOC702135), mRNA Length = 8421 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 3720 gatgaggaagacaaggaggtc 3740
>ref|XM_001094857.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 7 (LOC702135), mRNA Length = 8176 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 3475 gatgaggaagacaaggaggtc 3495
>ref|XM_001094738.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 6 (LOC702135), mRNA Length = 8493 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 3792 gatgaggaagacaaggaggtc 3812
>ref|XM_001094611.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 5 (LOC702135), mRNA Length = 7758 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 3057 gatgaggaagacaaggaggtc 3077
>ref|XM_001094486.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 4 (LOC702135), mRNA Length = 7679 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 2978 gatgaggaagacaaggaggtc 2998
>ref|XM_001094371.1| PREDICTED: Macaca mulatta similar to solute carrier family 38, member 1, transcript variant 3 (LOC702135), mRNA Length = 7754 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 gatgaggaagacaaggaggtc 989 ||||||||||||||||||||| Sbjct: 3053 gatgaggaagacaaggaggtc 3073
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 668 catcggcggcctgctggagca 688 ||||||||||||||||||||| Sbjct: 2008463 catcggcggcctgctggagca 2008443
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 844 tccgcaccgcgcagaccgaga 864 ||||||||||||||||||||| Sbjct: 57145 tccgcaccgcgcagaccgaga 57165
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 319 tcgcagatctgcgcccgccgccgcc 343 |||| |||||||||||||||||||| Sbjct: 2796397 tcgctgatctgcgcccgccgccgcc 2796373
>ref|XM_657888.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5376.2), mRNA Length = 2511 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cgcagcgcagagcaggcattg 118 ||||||||||||||||||||| Sbjct: 265 cgcagcgcagagcaggcattg 285
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 cctcatcagcctcatcgtcaa 604 ||||||||||||||||||||| Sbjct: 90632 cctcatcagcctcatcgtcaa 90612
>gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, complete sequence Length = 157782 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1461 ttcttttttccatgtggaacattct 1485 ||||| ||||||||||||||||||| Sbjct: 45714 ttcttctttccatgtggaacattct 45690
>gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196230 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1631 agggtgctgtgatgatttcctttca 1655 ||||||||||||| ||||||||||| Sbjct: 57251 agggtgctgtgatcatttcctttca 57275
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 659 cctcaagctcatcggcggcctgctggagc 687 |||||| ||||||| |||||||||||||| Sbjct: 30601 cctcaatctcatcgccggcctgctggagc 30629
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 10973145 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 10973097
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 cctcatcagcctcatcgtcaa 604 ||||||||||||||||||||| Sbjct: 13407169 cctcatcagcctcatcgtcaa 13407149
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 18025796 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 18025748
>gb|AC159133.2| Pan troglodytes BAC clone CH251-51M20 from chromosome unknown, complete sequence Length = 149808 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1397 cagtgatgagtggcatgcaga 1417 ||||||||||||||||||||| Sbjct: 106957 cagtgatgagtggcatgcaga 106977
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 676 gcctgctggagcagctccggg 696 ||||||||||||||||||||| Sbjct: 988221 gcctgctggagcagctccggg 988241
>gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, complete sequence Length = 173698 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1397 cagtgatgagtggcatgcaga 1417 ||||||||||||||||||||| Sbjct: 70548 cagtgatgagtggcatgcaga 70568
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209599 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1631 agggtgctgtgatgatttcctttca 1655 ||||||||||||| ||||||||||| Sbjct: 204776 agggtgctgtgatcatttcctttca 204800
>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown, complete sequence Length = 182330 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1397 cagtgatgagtggcatgcaga 1417 ||||||||||||||||||||| Sbjct: 177320 cagtgatgagtggcatgcaga 177340
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 53037 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 52989
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 2237 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 2189
>dbj|AK184590.1| Mus musculus cDNA, clone:Y0G0130M07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000031089, based on BLAT search Length = 264 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 cagtccgcctcgcccctccga 419 ||||||||||||||||||||| Sbjct: 26 cagtccgcctcgcccctccga 6
>emb|BX537326.9| Zebrafish DNA sequence from clone DKEY-4I23 in linkage group 2, complete sequence Length = 237869 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1979 agttaatttgtaaaaagtaactaaa 2003 |||||||||||||||||||| |||| Sbjct: 197231 agttaatttgtaaaaagtaaataaa 197207
>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0091I19 Length = 126544 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 35088 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 35040
>dbj|AK102912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113K17, full insert sequence Length = 3073 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1578 tgttacacttgctgtgtaaggagaaagcttcgtcaaaggctaaatattg 1626 ||||||||||||||||| |||||| ||| |||| | ||||||||||| Sbjct: 659 tgttacacttgctgtgtggagagaaaactttgtcagaagctaaatattg 707
>dbj|AK073928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073L20, full insert sequence Length = 1098 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 cctcatcagcctcatcgtcaa 604 ||||||||||||||||||||| Sbjct: 650 cctcatcagcctcatcgtcaa 630
>gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, complete sequence Length = 172240 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1906 actgtttgtgttgtatttatg 1926 ||||||||||||||||||||| Sbjct: 105093 actgtttgtgttgtatttatg 105073
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 962 ctctcttgatgaggaagacaa 982 ||||||||||||||||||||| Sbjct: 1266097 ctctcttgatgaggaagacaa 1266117
>dbj|AB070956.1| Streptomyces avermitilis peptide-7 biosynthetic gene cluster Length = 54101 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 676 gcctgctggagcagctccggg 696 ||||||||||||||||||||| Sbjct: 53 gcctgctggagcagctccggg 73 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 320,240,598 Number of extensions: 17784872 Number of successful extensions: 101860 Number of sequences better than 10.0: 88 Number of HSP's gapped: 101857 Number of HSP's successfully gapped: 115 Length of query: 2057 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2034 Effective length of database: 18,503,978,556 Effective search space: 37637092382904 Effective search space used: 37637092382904 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
