ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf88j05 |
|---|---|
| Clone Library Name | barley_pub |
>O80594:ERG28_ARATH Ergosterol biosynthetic protein 28 - Arabidopsis thaliana| (Mouse-ear cress) Length = 129 Score = 145 bits (366), Expect = 2e-34 Identities = 69/90 (76%), Positives = 74/90 (82%) Frame = +1 Query: 127 VAVFSQTEMTEIHGRTFGVWXXXXXXXXXXXAFNLENKPLYIATFLSFIYALGHFLTEYL 306 +AVFSQT M+E+HGRTFGVW AFNLENKPLY+ATFLSFIYALGHFLTEYL Sbjct: 31 LAVFSQTTMSEVHGRTFGVWTLLTCTLCFLCAFNLENKPLYLATFLSFIYALGHFLTEYL 90 Query: 307 IYHTMAAANLSTVGFFAGTSIVWMLLQWNS 396 Y TM ANLSTVGFFAGTSIVWMLL+WNS Sbjct: 91 FYQTMTIANLSTVGFFAGTSIVWMLLEWNS 120
>Q5R589:ERG28_PONPY Probable ergosterol biosynthetic protein 28 - Pongo pygmaeus| (Orangutan) Length = 140 Score = 49.3 bits (116), Expect = 2e-05 Identities = 25/66 (37%), Positives = 34/66 (51%) Frame = +1 Query: 160 IHGRTFGVWXXXXXXXXXXXAFNLENKPLYIATFLSFIYALGHFLTEYLIYHTMAAANLS 339 + RTFG+W A ++ NK LY T +F+ ALGHFL+E +Y T A Sbjct: 48 LQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----P 103 Query: 340 TVGFFA 357 T+G A Sbjct: 104 TIGVLA 109
>Q9UKR5:ERG28_HUMAN Probable ergosterol biosynthetic protein 28 - Homo sapiens (Human)| Length = 140 Score = 49.3 bits (116), Expect = 2e-05 Identities = 25/66 (37%), Positives = 34/66 (51%) Frame = +1 Query: 160 IHGRTFGVWXXXXXXXXXXXAFNLENKPLYIATFLSFIYALGHFLTEYLIYHTMAAANLS 339 + RTFG+W A ++ NK LY T +F+ ALGHFL+E +Y T A Sbjct: 48 LQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----P 103 Query: 340 TVGFFA 357 T+G A Sbjct: 104 TIGVLA 109
>Q9ERY9:ERG28_MOUSE Probable ergosterol biosynthetic protein 28 - Mus musculus (Mouse)| Length = 140 Score = 48.1 bits (113), Expect = 4e-05 Identities = 25/66 (37%), Positives = 34/66 (51%) Frame = +1 Query: 160 IHGRTFGVWXXXXXXXXXXXAFNLENKPLYIATFLSFIYALGHFLTEYLIYHTMAAANLS 339 + RTFG+W A ++ NK LY T +F+ ALGHFL+E ++ T A Sbjct: 48 LQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAA----P 103 Query: 340 TVGFFA 357 TVG A Sbjct: 104 TVGVLA 109
>P40030:ERG28_YEAST Ergosterol biosynthetic protein 28 - Saccharomyces cerevisiae| (Baker's yeast) Length = 148 Score = 43.9 bits (102), Expect = 7e-04 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = +1 Query: 145 TEMTEIHGRTFGVWXXXXXXXXXXXAFNLENKPLYIATFLSFIYALGHFLTEYLIYHTMA 324 TE T + RTFG W A L ++ F+S++ AL HF +E LI+ T Sbjct: 58 TETTHLSARTFGTWTFISCVIRFYGAMYLNEPHIFELVFMSYMVALFHFGSELLIFRTCK 117 Query: 325 AANLSTVGFF-----AGTSIVWMLLQ 387 GF + TS+VWM Q Sbjct: 118 LGK----GFMGPLVVSTTSLVWMYKQ 139
>O74820:ERG28_SCHPO Ergosterol biosynthetic protein 28 - Schizosaccharomyces pombe| (Fission yeast) Length = 136 Score = 42.4 bits (98), Expect = 0.002 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +1 Query: 133 VFSQT-EMTEIHGRTFGVWXXXXXXXXXXXAFNLENKPLYIATFLSFIYALGHFLTEYLI 309 V+S T E+ + GRTFG+W A+++ N +Y ++ A HFL+E+L+ Sbjct: 41 VYSNTNEVNGLQGRTFGIWTLLSAIVRFYCAYHITNPDVYFLCQCTYYLACFHFLSEWLL 100 Query: 310 YHT 318 + T Sbjct: 101 FRT 103
>Q6Z351:ALDOL_ORYSJ Putative aldehyde oxidase-like protein - Oryza sativa subsp.| japonica (Rice) Length = 1342 Score = 33.9 bits (76), Expect = 0.77 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Frame = -2 Query: 711 HTTQDGSLRSTNVFKRYKHA--------GVVFLSFMTHVALSQKKNVLVCHSS*ISGFHR 556 H D T VF+ Y+ A V +F+ HV+L + + +S H Sbjct: 405 HWASDCKKEHTLVFETYRAAPRPLGNAVSYVNSAFLGHVSLDKSSGDNI-----LSNLHL 459 Query: 555 *MENECVNQHNATVRKIKEKTSGRLLLASSILPLVRICHSRLLDSMGTTRIPMRV 391 +H RK++E +G++L AS +L +R+ ++ GTT RV Sbjct: 460 AF-GAYGTEHAIRARKVEEYLTGKILSASVVLEAIRLLRETIVPVEGTTHPEYRV 513
>Q69R21:ALDO4_ORYSJ Probable aldehyde oxidase 4 - Oryza sativa subsp. japonica (Rice)| Length = 837 Score = 33.5 bits (75), Expect = 1.0 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Frame = -2 Query: 711 HTTQDGSLRSTNVFKRYKHA--------GVVFLSFMTHVALSQKKNVLVCHSS*ISGFHR 556 H D T VF+ Y+ A V +F+ HV+L + + +S H Sbjct: 424 HWASDCKKEHTLVFETYRAAPRPLGNAVSYVNSAFLGHVSLDKSSGDNI-----LSNLHL 478 Query: 555 *MENECVNQHNATVRKIKEKTSGRLLLASSILPLVRICHSRLLDSMGTTRIPMRV 391 +H RK++E +G++L AS +L +R+ ++ GTT RV Sbjct: 479 AF-GAYGTKHAIRARKVEEYLTGKILSASVVLEAIRLLRETIVPVEGTTHPEYRV 532
>P29926:NQO14_PARDE NADH-quinone oxidoreductase chain 14 - Paracoccus denitrificans| Length = 499 Score = 32.0 bits (71), Expect = 2.9 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 482 SLPDVFSLIFLTVALCWFTHSFSIHLWKPEIYE 580 SL +F L+F+ V L + + H+W P++YE Sbjct: 200 SLGVLFGLVFMLVGLSFKVSAVPFHMWTPDVYE 232
>Q9W0V7:MTH8_DROME Probable G-protein coupled receptor Mth-like 8 precursor -| Drosophila melanogaster (Fruit fly) Length = 492 Score = 32.0 bits (71), Expect = 2.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 399 MRVPLKQHPYN*CSCKEANCAKICCSHGMIYQV 301 +R+P +H C CK C +ICC G IY + Sbjct: 71 IRIPASRH-LRACVCKTKPCVRICCLRGEIYDL 102
>Q9UMS6:SYNP2_HUMAN Synaptopodin-2 - Homo sapiens (Human)| Length = 1093 Score = 31.2 bits (69), Expect = 5.0 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -2 Query: 324 SHGMIYQVLREKVTKSIDE*QEGGYIQRLVFQVECAQKTQC 202 S G+ ++ E K+++ GGY++ Q+ A KTQC Sbjct: 88 SSGISEALISENENKNLEHLTHGGYVESTTLQIRPATKTQC 128
>P94583:RAPD_BACSU Response regulator aspartate phosphatase D - Bacillus subtilis| Length = 354 Score = 30.8 bits (68), Expect = 6.5 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = -1 Query: 799 FFFCILKCFQYIHASPLGYMTRVHENIRFTYNTGWITKINKCVQK 665 +F +LK ++ SP+ Y+ V+E++R + TG IT+ +QK Sbjct: 233 YFRKVLKNQEFEMNSPVSYLHCVYESVRALFKTGNITEAKAVLQK 277
>P35950:LDLR_CRIGR Low-density lipoprotein receptor precursor - Cricetulus griseus| (Chinese hamster) Length = 854 Score = 30.8 bits (68), Expect = 6.5 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 17/106 (16%) Frame = -2 Query: 444 CHS-------RLLDSMGTTRIPMRVPLKQHPYN*CSCKEANCAKIC----------CSHG 316 CHS ++ DSM R P+K N C C+ +C C +G Sbjct: 285 CHSGECIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNG 344 Query: 315 MIYQVLREKVTKSIDE*QEGGYIQRLVFQVECAQKTQCAGQECPDP 178 +Q++ + + IDE QE +L +E + K +C DP Sbjct: 345 --FQLVDQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDP 388
>P50973:NUON_RHOCA NADH-quinone oxidoreductase subunit N - Rhodobacter capsulatus| (Rhodopseudomonas capsulata) Length = 478 Score = 30.4 bits (67), Expect = 8.5 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +2 Query: 494 VFSLIFLTVALCWFTHSFSIHLWKPEIYE 580 +F L+FL L + + H+W P++YE Sbjct: 203 LFGLVFLLAGLAFKVSAVPFHMWTPDVYE 231 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 139,493,026 Number of extensions: 3085309 Number of successful extensions: 8380 Number of sequences better than 10.0: 14 Number of HSP's gapped: 8375 Number of HSP's successfully gapped: 14 Length of query: 267 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 156 Effective length of database: 70,239,694 Effective search space: 10957392264 Effective search space used: 10957392264 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
