>Q5BBL4:HSE1_EMENI Class E vacuolar protein-sorting machinery protein hse1 -|
           Emericella nidulans (Aspergillus nidulans)
          Length = 581
 Score = 35.4 bits (80), Expect = 0.71
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -1

Query: 349 QPESPLT*QSSEAPTPATLSPRRYPGTARGSRPHPAMAPKA 227
           Q +SP        P P T  P   PGTA GS P+P+ +P A
Sbjct: 518 QSQSPYPATPVTQPPPPTQQPPPVPGTASGSAPYPSASPSA 558

>Q8R2I0:FOXE1_MOUSE Forkhead box protein E1 - Mus musculus (Mouse)|
          Length = 371

 Score = 35.0 bits (79), Expect = 0.92
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 1080 PAPDADTVIIPAPEERGAAEVPGIGLPEELLGRAGLDRRREQAVHR 1217
            P P     +    EERG A   G G+P E  GR    RRR++ + R
Sbjct: 8    PPPPQPETLAAVKEERGEAAAAGAGVPAEAAGRGAGGRRRKRPLQR 53

>Q7Z6E9:RBBP6_HUMAN Retinoblastoma-binding protein 6 - Homo sapiens (Human)|
          Length = 1792

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
 Frame = +1

Query: 943  KTQRDVPVERHSALKRSSSYNAERGGENLCECA-GPDEEDTAPRSRCLPRTPILSSFLHP 1119
            K +RD P  +    KR +  +A    EN+ + A GP E+    R R     P       P
Sbjct: 1006 KRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEP-------P 1058

Query: 1120 KSEAQQKSPVSD-CRRSSSAGPDSIDGGSKRFTDAPGSRAESFRKENKEKLVKIEES 1287
              +A++++P +D  + SSS+  D    G+ R   +  ++     K  KE+ VK + S
Sbjct: 1059 IKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYS 1115

>P04196:HRG_HUMAN Histidine-rich glycoprotein precursor - Homo sapiens (Human)|
          Length = 525

 Score = 33.1 bits (74), Expect = 3.5
 Identities = 16/49 (32%), Positives = 18/49 (36%)
 Frame = -1

Query: 598 HGLRPYSMGWHSGT*HPGRPPGARPTGEHGSAAGTR*HHEPQHHDRCSD 452
           HG  P++   H    H   P G  P G H        HH   HH  C D
Sbjct: 362 HGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHD 410

>Q6NCN5:IF2_RHOPA Translation initiation factor IF-2 - Rhodopseudomonas palustris|
          Length = 883

 Score = 32.7 bits (73), Expect = 4.6
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
 Frame = +1

Query: 214 KPRRAPSVPSRDEDDSPSPCRGXXXXXXXXXXXXQRTVMSRVTPAEFRVFKPTGLMDAAT 393
           KP  AP+ P R +   P+P +             +  ++ R    + R  + T L DA  
Sbjct: 68  KPAPAPAAPPRQQQSRPAPQQS------------RSGMVLRTLTEDERTARATALADARV 115

Query: 394 QTDDLRRRS---ARRVPEMHKKSLSTDHDAVVRDVTE---YRQQSHARRSAELQGVSR 549
           +  + R+++   A+R  E  K   +    A  R   E   +RQ+  A+R AE +   R
Sbjct: 116 REIEERKQAEIEAQRRAEQEKIEKAEREAAEARRKAEEERHRQEDEAKRKAETEAKKR 173

>Q01780:EXOSX_HUMAN Exosome component 10 - Homo sapiens (Human)|
          Length = 885

 Score = 32.7 bits (73), Expect = 4.6
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1045 PDE-EDTAPRSRCLPRTPILSSFLHPKSEAQQKSPVSDCRRSSSAGPDSIDGGSKRFTDA 1221
            PDE ED    + CL  T +++ F  P +E  +K P++  ++ +    +S +   + F  +
Sbjct: 639  PDEKEDNLLGTTCLIATAVITLFNEPSAEDSKKGPLTVAQKKAQNIMESFENPFRMFLPS 698

Query: 1222 PGSRAESFRKENKEKLVKIEE 1284
             G RA   +    +   KI E
Sbjct: 699  LGHRAPVSQAAKFDPSTKIYE 719

>Q5P0E7:UVRB_AZOSE UvrABC system protein B - Azoarcus sp. (strain EbN1) (Aromatoleum|
           aromaticum (strain EbN1))
          Length = 685

 Score = 32.3 bits (72), Expect = 6.0
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +1

Query: 355 RVFKPTGLMD-------AATQTDDLRRRSARRVPEMHKKSLSTDHDAVVRDVTEYRQQSH 513
           +V +PTGL+D       A TQ DDL   + RR+    +  ++T    +  D+T+Y  ++ 
Sbjct: 423 QVVRPTGLIDPAIDVRPATTQVDDLLSEAKRRIAVGERVLVTTLTKRMAEDLTDYLAENG 482

Query: 514 AR 519
            R
Sbjct: 483 IR 484

>Q9QYN5:BCL10_RAT B-cell lymphoma/leukemia 10 - Rattus norvegicus (Rat)|
          Length = 233

 Score = 32.3 bits (72), Expect = 6.0
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
 Frame = +1

Query: 859  LDYLSENPRFIGTRMED--KEYFSGSIIETKTQ-----RDVPVERHSALKRSSSYNAERG 1017
            LDYL ENP+ + T +E   +E     +I+  T      R++ +E    LK SS      G
Sbjct: 69   LDYLQENPKGLDTLVESIRREKTQNFLIQKITDEVLKLRNIKLEHLKGLKCSSCEPFAAG 128

Query: 1018 GENLCECAGPDEEDTAPRSRCLPRTPILSSFLHPKSEA 1131
              N    +  DE + + + R  P T I     HP+ E+
Sbjct: 129  ATNNLSRSNSDESNFSEKQR--PSTVI----YHPEGES 160

>Q9H5N1:RABE2_HUMAN Rab GTPase-binding effector protein 2 - Homo sapiens (Human)|
          Length = 569

 Score = 32.0 bits (71), Expect = 7.8
 Identities = 28/83 (33%), Positives = 33/83 (39%)
 Frame = -3

Query: 1205 LLPPSIESGPAEELLRQSDTGDFCCASLFGCRNDDSIGVRGRHLERGAVSSSSGPAHSQR 1026
            LLP S +  P  E L +        A  F    DDS  +    L  G  SSSS P   Q 
Sbjct: 196  LLPLSRDPSPPLEPLEELSGDGGPAAEAFAHNCDDSASISSFSLGGGVGSSSSLPQSRQG 255

Query: 1025 FSPPLSAL*EEDRLSAECLSTGT 957
             SP       E   +A  +STGT
Sbjct: 256  LSP-------EQEETASLVSTGT 271


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 276,250,685
Number of extensions: 6144236
Number of successful extensions: 19657
Number of sequences better than 10.0: 9
Number of HSP's gapped: 19628
Number of HSP's successfully gapped: 9
Length of query: 547
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 429
Effective length of database: 68,319,629
Effective search space: 29309120841
Effective search space used: 29309120841
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)