No.
Definition
Score (bits)
E Value
1 dbj|AK070368.1| Oryza sativa (japonica cultivar-group) cDNA clon...
190
1e-44
2 ref|NM_001057494.1| Oryza sativa (japonica cultivar-group) Os03g...
168
4e-38
3 gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom...
168
4e-38
4 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
168
4e-38
5 dbj|AK101780.1| Oryza sativa (japonica cultivar-group) cDNA clon...
168
4e-38
6 dbj|AK226458.1| Arabidopsis thaliana mRNA for hypothetical prote...
50
0.026
7 ref|NM_125371.4| Arabidopsis thaliana unknown protein (AT5G59790...
50
0.026
8 gb|BT008516.1| Arabidopsis thaliana At5g59790 gene, complete cds
50
0.026
9 gb|AY093139.1| Arabidopsis thaliana unknown protein (At5g59790) ...
50
0.026
10 dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
50
0.026
11 emb|BX829747.1|CNS09YS3 Arabidopsis thaliana Full-length cDNA Co...
50
0.026
12 gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, c...
48
0.10
13 gb|DQ019632.1| Triticum aestivum nuclear transportin (TRN-SR) mR...
48
0.10
14 gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge...
44
1.6
15 gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hos...
44
1.6
16 gb|AC110133.5| Rattus norvegicus 3 BAC CH230-40N24 (Children's H...
44
1.6
17 gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, co...
44
1.6
18 gb|AC107789.7| Mus musculus chromosome 1, clone RP23-409K18, com...
44
1.6
19 gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosom...
44
1.6
20 gb|AC161148.7| Mus musculus BAC clone RP23-358L5 from chromosome...
44
1.6
21 gb|AC111082.23| Mus musculus chromosome 17, clone RP23-140I9, co...
44
1.6
22 emb|CT033773.8| Mouse DNA sequence from clone RP23-176M23 on chr...
44
1.6
23 ref|XM_001223921.1| Chaetomium globosum CBS 148.51 hypothetical ...
42
6.3
24 gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, com...
42
6.3
25 gb|AC123565.6| Homo sapiens 3 BAC RP11-539J20 (Roswell Park Canc...
42
6.3
26 gb|AC121877.2| Mus musculus BAC clone RP24-127G8 from 7, complet...
42
6.3
27 dbj|AK074701.1| Homo sapiens cDNA FLJ90220 fis, clone MAMMA10031...
42
6.3
28 emb|AL355863.18| Human DNA sequence from clone RP11-479A21 on ch...
42
6.3
29 emb|AL645697.9| Mouse DNA sequence from clone RP23-276E19 on chr...
42
6.3
30 gb|AC009080.8| Homo sapiens chromosome 16 clone RP11-341K23, com...
42
6.3
31 gb|AC108868.4| Homo sapiens BAC clone RP11-448J14 from 2, comple...
42
6.3
32 gb|AC138677.8| Mus musculus chromosome 8, clone RP23-366O14, com...
42
6.3
33 gb|AC151534.2| Mus musculus BAC clone RP23-446E13 from 7, comple...
42
6.3
34 gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosom...
42
6.3
35 emb|AL731865.9| Mouse DNA sequence from clone RP23-100A9 on chro...
42
6.3
>dbj|AK070368.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023049D14, full
insert sequence
Length = 2515
Score = 190 bits (96), Expect = 1e-44
Identities = 524/666 (78%), Gaps = 3/666 (0%)
Strand = Plus / Plus
Query: 349 gaattcagggttttcaagcccaccggtttgatggatgccgcaactcaaaccgatgacctc 408
|||||||| |||| ||||||||| || | ||||||| ||||||||||| |||||||||
Sbjct: 1139 gaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctc 1198
Query: 409 aggaggagatccgctcggagagtacccgagatgcacaagaagagtctgagcaccgatcat 468
| || || || | |||| ||| ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 1199 ggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcat 1258
Query: 469 gatgctgtggttcgtgatgtcaccgagtaccggcagcagagccatgctcgccggtcggcc 528
|| | || || || || | || ||||||||||| ||||| | |||||||| ||
Sbjct: 1259 gactccgtagtccgggaaattactgagtaccggcaa---agccaaccacgccggtcagca 1315
Query: 529 gagctccagggggtctcccgggatgtcatgtcccactgtgccaccccattgagtatggcc 588
|||||||||||| || || |||| | ||||||||| ||| || ||| |||| || |
Sbjct: 1316 gagctccaggggatcgccagggaggccatgtcccagtgtcatactccactgagcatacct 1375
Query: 589 tcaacccatggcaagtctgagagcttagagtcgttgatacgtgccgacaacgcgtcaacg 648
||| ||| ||||||||| ||||| |||||||| |||||||| || || ||| || |
Sbjct: 1376 tcatcccgtggcaagtcggagagtttagagtccttgatacgagcagataacaatgcattg 1435
Query: 649 aacagcttcaggatccttgaagaggacgacattgtcgtgccgacctgcccgaagctgagg 708
|| || || |||| ||||||||||| || || | |||| |||||||| | |||||||
Sbjct: 1436 aatagttttcggattcttgaagaggatgatatcattatgccaacctgccccaggctgagg 1495
Query: 709 ccggcgaatgtgctgatgcagctcatcacctgtggttcactttcagtgaaagaccatgac 768
|| |||||||| || ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 1496 ccagcgaatgtactaatgcaacttatcacctgtggttcgctttcggtgaaagatcatgag 1555
Query: 769 agcattggccttgttggggcttacaagccaaggtttccaaacctgaagttcccatctccg 828
| || | ||||||| | |||||||||||||| |||||| |||||||||| || |||
Sbjct: 1556 aatatcagacttgttgaaggatacaagccaaggttcccaaacatgaagttcccgtcaccg 1615
Query: 829 ctgatctctcgctccatgatgatgggcgagctcgattacctatcggagaatccgagattt 888
| || ||||| ||||||||||||| ||||| |||||||| || |||||||| |||||
Sbjct: 1616 ttaatttctcgtaccatgatgatgggtgagcttgattacctgtcagagaatcccagattg 1675
Query: 889 ataggcactcggatggaagataaggagtattttagtgggagcattattgagaccaagacg 948
|| || | || ||||||| ||||| || |||||||||||| |||| || || |||| |
Sbjct: 1676 atgggtatgcgtctggaagacaaggaatactttagtgggagccttatcgaaactaagatg 1735
Query: 949 cagagagatgttcccgttgagaggcactcggcgcttaagcggtcctcttcctacaatgca 1008
|| |||||||| |||| ||| || | || |||||||| || || ||||||||||||||
Sbjct: 1736 caaagagatgtacccgctgacagatattcagcgcttaaacgttcttcttcctacaatgcg 1795
Query: 1009 gaaagg 1014
||||||
Sbjct: 1796 gaaagg 1801
Score = 167 bits (84), Expect = 2e-37
Identities = 263/322 (81%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 16 gtcctcccggcgaccgacggcgagtacgtgctcaagggctccgagatcctggaccaacct 75
|||| |||||| ||||||||||| || |||||||||||||||||| || ||||||| ||
Sbjct: 800 gtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtct 859
Query: 76 tcttcaggtcaatttcaccatggcagcaatggcaaccagaagcagcagagcagggtgaga 135
|||||||| |||||| | || || | |||||| ||||| ||||| ||||||||| ||| |
Sbjct: 860 tcttcaggccaattttatcagggtaccaatggaaaccaaaagcaacagagcaggctgaaa 919
Query: 136 gagggtaatacaaggctgcctttgtcaagggaggcttccttctcctcctccccacctagt 195
||||| | || ||||||||||| | || |||||||||| ||||||||||| ||||||
Sbjct: 920 gaggg---tgcacggctgcctttgcctagagaggcttcctattcctcctcccctcctagt 976
Query: 196 gtgacagttagagaagccaagcctcggcgcgcgccttcggtgccatcgcgggatgaggac 255
|||| |||||||||||||||||| |||| |||||||||| || || | || |||||
Sbjct: 977 gtgatagttagagaagccaagccgaggcgttcgccttcggttccttctctagaagaggat 1036
Query: 256 gactccccctcgccgtgccggggtacctcctcggagacaatgtcgccggagtcggagcct 315
||||| || || ||| | | |||||||| ||||| |||||||| ||||||||||||
Sbjct: 1037 gactcaccagtgcaatgcagagttacctccttggagaacatgtcgccagagtcggagcct 1096
Query: 316 cagaggactgtcatgtcaaggg 337
|| || ||| || |||||||||
Sbjct: 1097 caaagaactctcttgtcaaggg 1118
Score = 83.8 bits (42), Expect = 2e-12
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 1075 aggtgcctgccccggacgccgatactgtcatcattcctgcacccgaagagcgaggcgcag 1134
|||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1862 aggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggc---a 1918
Query: 1135 cagaagtccccggtatcggactgccggaggagctcctcggccgg 1178
|||||| ||| | || ||||||||||||||||| ||||||||
Sbjct: 1919 atgaagtcaccgatctccgactgccggaggagctcgtcggccgg 1962
Score = 65.9 bits (33), Expect = 4e-07
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1259 aggagaagctcgtcaagatcgaggaaagttaagtgct 1295
|||||||||||||||||||||| ||||||||||||||
Sbjct: 2058 aggagaagctcgtcaagatcgaagaaagttaagtgct 2094
Score = 60.0 bits (30), Expect = 3e-05
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1315 ctgggctgtcgtcgggagctcgtgtcgtgatccagtgcaccgtgccctgc 1364
||||||||||||| |||||||| |||||||| |||| ||| |||||||||
Sbjct: 2133 ctgggctgtcgtcaggagctcgagtcgtgattcagtacacggtgccctgc 2182
>ref|NM_001057494.1 | Oryza sativa (japonica cultivar-group) Os03g0692400 (Os03g0692400)
mRNA, complete cds
Length = 2797
Score = 168 bits (85), Expect = 4e-38
Identities = 268/329 (81%)
Strand = Plus / Plus
Query: 686 tgccgacctgcccgaagctgaggccggcgaatgtgctgatgcagctcatcacctgtggtt 745
|||| |||||||| ||||||||||| |||||||| || ||||| || |||||||||||||
Sbjct: 1758 tgccaacctgccccaagctgaggccagcgaatgtactaatgcaacttatcacctgtggtt 1817
Query: 746 cactttcagtgaaagaccatgacagcattggccttgttggggcttacaagccaaggtttc 805
| ||||| |||||||| ||||| | || | ||||||| | |||||||||||||| |
Sbjct: 1818 cgctttcggtgaaagatcatgagaatatcagacttgttgaaggatacaagccaaggttcc 1877
Query: 806 caaacctgaagttcccatctccgctgatctctcgctccatgatgatgggcgagctcgatt 865
||||| |||||||||| || ||| | || ||||| ||||||||||||| ||||| ||||
Sbjct: 1878 caaacatgaagttcccgtcaccgttaatttctcgtaccatgatgatgggtgagcttgatt 1937
Query: 866 acctatcggagaatccgagatttataggcactcggatggaagataaggagtattttagtg 925
|||| || |||||||| ||||| || || | || ||||||| ||||| || |||||||
Sbjct: 1938 acctgtcagagaatcccagattgatgggtatgcgtctggaagacaaggaatactttagtg 1997
Query: 926 ggagcattattgagaccaagacgcagagagatgttcccgttgagaggcactcggcgctta 985
||||| |||| || || |||| ||| |||||||| |||| ||| || | || |||||||
Sbjct: 1998 ggagccttatcgaaactaagatgcaaagagatgtacccgctgacagatattcagcgctta 2057
Query: 986 agcggtcctcttcctacaatgcagaaagg 1014
| || || |||||||||||||| ||||||
Sbjct: 2058 aacgttcttcttcctacaatgcggaaagg 2086
Score = 167 bits (84), Expect = 2e-37
Identities = 263/322 (81%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 16 gtcctcccggcgaccgacggcgagtacgtgctcaagggctccgagatcctggaccaacct 75
|||| |||||| ||||||||||| || |||||||||||||||||| || ||||||| ||
Sbjct: 1085 gtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtct 1144
Query: 76 tcttcaggtcaatttcaccatggcagcaatggcaaccagaagcagcagagcagggtgaga 135
|||||||| |||||| | || || | |||||| ||||| ||||| ||||||||| ||| |
Sbjct: 1145 tcttcaggccaattttatcagggtaccaatggaaaccaaaagcaacagagcaggctgaaa 1204
Query: 136 gagggtaatacaaggctgcctttgtcaagggaggcttccttctcctcctccccacctagt 195
||||| | || ||||||||||| | || |||||||||| ||||||||||| ||||||
Sbjct: 1205 gaggg---tgcacggctgcctttgcctagagaggcttcctattcctcctcccctcctagt 1261
Query: 196 gtgacagttagagaagccaagcctcggcgcgcgccttcggtgccatcgcgggatgaggac 255
|||| |||||||||||||||||| |||| |||||||||| || || | || |||||
Sbjct: 1262 gtgatagttagagaagccaagccgaggcgttcgccttcggttccttctctagaagaggat 1321
Query: 256 gactccccctcgccgtgccggggtacctcctcggagacaatgtcgccggagtcggagcct 315
||||| || || ||| | | |||||||| ||||| |||||||| ||||||||||||
Sbjct: 1322 gactcaccagtgcaatgcagagttacctccttggagaacatgtcgccagagtcggagcct 1381
Query: 316 cagaggactgtcatgtcaaggg 337
|| || ||| || |||||||||
Sbjct: 1382 caaagaactctcttgtcaaggg 1403
Score = 83.8 bits (42), Expect = 2e-12
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 1075 aggtgcctgccccggacgccgatactgtcatcattcctgcacccgaagagcgaggcgcag 1134
|||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 2147 aggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggc---a 2203
Query: 1135 cagaagtccccggtatcggactgccggaggagctcctcggccgg 1178
|||||| ||| | || ||||||||||||||||| ||||||||
Sbjct: 2204 atgaagtcaccgatctccgactgccggaggagctcgtcggccgg 2247
Score = 75.8 bits (38), Expect = 4e-10
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 349 gaattcagggttttcaagcccaccggtttgatggatgccgcaactcaaaccgatgacctc 408
|||||||| |||| ||||||||| || | ||||||| ||||||||||| |||||||||
Sbjct: 1424 gaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctc 1483
Query: 409 aggaggagatccgctcggagagtacccgagatgcacaagaagagtctgagcaccgatcat 468
| || || || | |||| ||| ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 1484 ggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcat 1543
Query: 469 ga 470
||
Sbjct: 1544 ga 1545
Score = 65.9 bits (33), Expect = 4e-07
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1259 aggagaagctcgtcaagatcgaggaaagttaagtgct 1295
|||||||||||||||||||||| ||||||||||||||
Sbjct: 2343 aggagaagctcgtcaagatcgaagaaagttaagtgct 2379
Score = 60.0 bits (30), Expect = 3e-05
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1315 ctgggctgtcgtcgggagctcgtgtcgtgatccagtgcaccgtgccctgc 1364
||||||||||||| |||||||| |||||||| |||| ||| |||||||||
Sbjct: 2418 ctgggctgtcgtcaggagctcgagtcgtgattcagtacacggtgccctgc 2467
>gb|AC105747.4 | Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
sequence
Length = 138345
Score = 168 bits (85), Expect = 4e-38
Identities = 268/329 (81%)
Strand = Plus / Minus
Query: 686 tgccgacctgcccgaagctgaggccggcgaatgtgctgatgcagctcatcacctgtggtt 745
|||| |||||||| ||||||||||| |||||||| || ||||| || |||||||||||||
Sbjct: 116858 tgccaacctgccccaagctgaggccagcgaatgtactaatgcaacttatcacctgtggtt 116799
Query: 746 cactttcagtgaaagaccatgacagcattggccttgttggggcttacaagccaaggtttc 805
| ||||| |||||||| ||||| | || | ||||||| | |||||||||||||| |
Sbjct: 116798 cgctttcggtgaaagatcatgagaatatcagacttgttgaaggatacaagccaaggttcc 116739
Query: 806 caaacctgaagttcccatctccgctgatctctcgctccatgatgatgggcgagctcgatt 865
||||| |||||||||| || ||| | || ||||| ||||||||||||| ||||| ||||
Sbjct: 116738 caaacatgaagttcccgtcaccgttaatttctcgtaccatgatgatgggtgagcttgatt 116679
Query: 866 acctatcggagaatccgagatttataggcactcggatggaagataaggagtattttagtg 925
|||| || |||||||| ||||| || || | || ||||||| ||||| || |||||||
Sbjct: 116678 acctgtcagagaatcccagattgatgggtatgcgtctggaagacaaggaatactttagtg 116619
Query: 926 ggagcattattgagaccaagacgcagagagatgttcccgttgagaggcactcggcgctta 985
||||| |||| || || |||| ||| |||||||| |||| ||| || | || |||||||
Sbjct: 116618 ggagccttatcgaaactaagatgcaaagagatgtacccgctgacagatattcagcgctta 116559
Query: 986 agcggtcctcttcctacaatgcagaaagg 1014
| || || |||||||||||||| ||||||
Sbjct: 116558 aacgttcttcttcctacaatgcggaaagg 116530
Score = 107 bits (54), Expect = 1e-19
Identities = 191/236 (80%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 102 caatggcaaccagaagcagcagagcagggtgagagagggtaatacaaggctgcctttgtc 161
|||||| ||||| ||||| ||||||||| ||| ||||||| || ||||||||||| |
Sbjct: 117445 caatggaaaccaaaagcaacagagcaggctgaaagagggtg---cacggctgcctttgcc 117389
Query: 162 aagggaggcttccttctcctcctccccacctagtgtgacagttagagaagccaagcctcg 221
|| |||||||||| ||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 117388 tagagaggcttcctattcctcctcccctcctagtgtgatagttagagaagccaagccgag 117329
Query: 222 gcgcgcgccttcggtgccatcgcgggatgaggacgactccccctcgccgtgccggggtac 281
||| |||||||||| || || | || ||||| ||||| || || ||| | | |||
Sbjct: 117328 gcgttcgccttcggttccttctctagaagaggatgactcaccagtgcaatgcagagttac 117269
Query: 282 ctcctcggagacaatgtcgccggagtcggagcctcagaggactgtcatgtcaaggg 337
||||| ||||| |||||||| |||||||||||||| || ||| || |||||||||
Sbjct: 117268 ctccttggagaacatgtcgccagagtcggagcctcaaagaactctcttgtcaaggg 117213
Score = 83.8 bits (42), Expect = 2e-12
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 1075 aggtgcctgccccggacgccgatactgtcatcattcctgcacccgaagagcgaggcgcag 1134
|||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 114971 aggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggc---a 114915
Query: 1135 cagaagtccccggtatcggactgccggaggagctcctcggccgg 1178
|||||| ||| | || ||||||||||||||||| ||||||||
Sbjct: 114914 atgaagtcaccgatctccgactgccggaggagctcgtcggccgg 114871
Score = 75.8 bits (38), Expect = 4e-10
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 349 gaattcagggttttcaagcccaccggtttgatggatgccgcaactcaaaccgatgacctc 408
|||||||| |||| ||||||||| || | ||||||| ||||||||||| |||||||||
Sbjct: 117192 gaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctc 117133
Query: 409 aggaggagatccgctcggagagtacccgagatgcacaagaagagtctgagcaccgatcat 468
| || || || | |||| ||| ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 117132 ggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcat 117073
Query: 469 ga 470
||
Sbjct: 117072 ga 117071
Score = 73.8 bits (37), Expect = 2e-09
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 16 gtcctcccggcgaccgacggcgagtacgtgctcaagggctccgagatcctggaccaacct 75
|||| |||||| ||||||||||| || |||||||||||||||||| || ||||||| ||
Sbjct: 117627 gtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtct 117568
Query: 76 tcttcaggt 84
|||||||||
Sbjct: 117567 tcttcaggt 117559
Score = 65.9 bits (33), Expect = 4e-07
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 1259 aggagaagctcgtcaagatcgaggaaagttaagtgct 1295
|||||||||||||||||||||| ||||||||||||||
Sbjct: 114775 aggagaagctcgtcaagatcgaagaaagttaagtgct 114739
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 168 bits (85), Expect = 4e-38
Identities = 268/329 (81%)
Strand = Plus / Minus
Query: 686 tgccgacctgcccgaagctgaggccggcgaatgtgctgatgcagctcatcacctgtggtt 745
|||| |||||||| ||||||||||| |||||||| || ||||| || |||||||||||||
Sbjct: 27507974 tgccaacctgccccaagctgaggccagcgaatgtactaatgcaacttatcacctgtggtt 27507915
Query: 746 cactttcagtgaaagaccatgacagcattggccttgttggggcttacaagccaaggtttc 805
| ||||| |||||||| ||||| | || | ||||||| | |||||||||||||| |
Sbjct: 27507914 cgctttcggtgaaagatcatgagaatatcagacttgttgaaggatacaagccaaggttcc 27507855
Query: 806 caaacctgaagttcccatctccgctgatctctcgctccatgatgatgggcgagctcgatt 865
||||| |||||||||| || ||| | || ||||| ||||||||||||| ||||| ||||
Sbjct: 27507854 caaacatgaagttcccgtcaccgttaatttctcgtaccatgatgatgggtgagcttgatt 27507795
Query: 866 acctatcggagaatccgagatttataggcactcggatggaagataaggagtattttagtg 925
|||| || |||||||| ||||| || || | || ||||||| ||||| || |||||||
Sbjct: 27507794 acctgtcagagaatcccagattgatgggtatgcgtctggaagacaaggaatactttagtg 27507735
Query: 926 ggagcattattgagaccaagacgcagagagatgttcccgttgagaggcactcggcgctta 985
||||| |||| || || |||| ||| |||||||| |||| ||| || | || |||||||
Sbjct: 27507734 ggagccttatcgaaactaagatgcaaagagatgtacccgctgacagatattcagcgctta 27507675
Query: 986 agcggtcctcttcctacaatgcagaaagg 1014
| || || |||||||||||||| ||||||
Sbjct: 27507674 aacgttcttcttcctacaatgcggaaagg 27507646
Score = 107 bits (54), Expect = 1e-19
Identities = 191/236 (80%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 102 caatggcaaccagaagcagcagagcagggtgagagagggtaatacaaggctgcctttgtc 161
|||||| ||||| ||||| ||||||||| ||| ||||||| || ||||||||||| |
Sbjct: 27508561 caatggaaaccaaaagcaacagagcaggctgaaagagggtg---cacggctgcctttgcc 27508505
Query: 162 aagggaggcttccttctcctcctccccacctagtgtgacagttagagaagccaagcctcg 221
|| |||||||||| ||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 27508504 tagagaggcttcctattcctcctcccctcctagtgtgatagttagagaagccaagccgag 27508445
Query: 222 gcgcgcgccttcggtgccatcgcgggatgaggacgactccccctcgccgtgccggggtac 281
||| |||||||||| || || | || ||||| ||||| || || ||| | | |||
Sbjct: 27508444 gcgttcgccttcggttccttctctagaagaggatgactcaccagtgcaatgcagagttac 27508385
Query: 282 ctcctcggagacaatgtcgccggagtcggagcctcagaggactgtcatgtcaaggg 337
||||| ||||| |||||||| |||||||||||||| || ||| || |||||||||
Sbjct: 27508384 ctccttggagaacatgtcgccagagtcggagcctcaaagaactctcttgtcaaggg 27508329
Score = 83.8 bits (42), Expect = 2e-12
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 1075 aggtgcctgccccggacgccgatactgtcatcattcctgcacccgaagagcgaggcgcag 1134
|||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 27506087 aggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggc---a 27506031
Query: 1135 cagaagtccccggtatcggactgccggaggagctcctcggccgg 1178
|||||| ||| | || ||||||||||||||||| ||||||||
Sbjct: 27506030 atgaagtcaccgatctccgactgccggaggagctcgtcggccgg 27505987
Score = 75.8 bits (38), Expect = 4e-10
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 349 gaattcagggttttcaagcccaccggtttgatggatgccgcaactcaaaccgatgacctc 408
|||||||| |||| ||||||||| || | ||||||| ||||||||||| |||||||||
Sbjct: 27508308 gaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctc 27508249
Query: 409 aggaggagatccgctcggagagtacccgagatgcacaagaagagtctgagcaccgatcat 468
| || || || | |||| ||| ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 27508248 ggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcat 27508189
Query: 469 ga 470
||
Sbjct: 27508188 ga 27508187
Score = 73.8 bits (37), Expect = 2e-09
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 16 gtcctcccggcgaccgacggcgagtacgtgctcaagggctccgagatcctggaccaacct 75
|||| |||||| ||||||||||| || |||||||||||||||||| || ||||||| ||
Sbjct: 27508743 gtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtct 27508684
Query: 76 tcttcaggt 84
|||||||||
Sbjct: 27508683 tcttcaggt 27508675
Score = 65.9 bits (33), Expect = 4e-07
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 1259 aggagaagctcgtcaagatcgaggaaagttaagtgct 1295
|||||||||||||||||||||| ||||||||||||||
Sbjct: 27505891 aggagaagctcgtcaagatcgaagaaagttaagtgct 27505855
>dbj|AK101780.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033064P17, full
insert sequence
Length = 2798
Score = 168 bits (85), Expect = 4e-38
Identities = 268/329 (81%)
Strand = Plus / Plus
Query: 686 tgccgacctgcccgaagctgaggccggcgaatgtgctgatgcagctcatcacctgtggtt 745
|||| |||||||| ||||||||||| |||||||| || ||||| || |||||||||||||
Sbjct: 1759 tgccaacctgccccaagctgaggccagcgaatgtactaatgcaacttatcacctgtggtt 1818
Query: 746 cactttcagtgaaagaccatgacagcattggccttgttggggcttacaagccaaggtttc 805
| ||||| |||||||| ||||| | || | ||||||| | |||||||||||||| |
Sbjct: 1819 cgctttcggtgaaagatcatgagaatatcagacttgttgaaggatacaagccaaggttcc 1878
Query: 806 caaacctgaagttcccatctccgctgatctctcgctccatgatgatgggcgagctcgatt 865
||||| |||||||||| || ||| | || ||||| ||||||||||||| ||||| ||||
Sbjct: 1879 caaacatgaagttcccgtcaccgttaatttctcgtaccatgatgatgggtgagcttgatt 1938
Query: 866 acctatcggagaatccgagatttataggcactcggatggaagataaggagtattttagtg 925
|||| || |||||||| ||||| || || | || ||||||| ||||| || |||||||
Sbjct: 1939 acctgtcagagaatcccagattgatgggtatgcgtctggaagacaaggaatactttagtg 1998
Query: 926 ggagcattattgagaccaagacgcagagagatgttcccgttgagaggcactcggcgctta 985
||||| |||| || || |||| ||| |||||||| |||| ||| || | || |||||||
Sbjct: 1999 ggagccttatcgaaactaagatgcaaagagatgtacccgctgacagatattcagcgctta 2058
Query: 986 agcggtcctcttcctacaatgcagaaagg 1014
| || || |||||||||||||| ||||||
Sbjct: 2059 aacgttcttcttcctacaatgcggaaagg 2087
Score = 167 bits (84), Expect = 2e-37
Identities = 263/322 (81%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 16 gtcctcccggcgaccgacggcgagtacgtgctcaagggctccgagatcctggaccaacct 75
|||| |||||| ||||||||||| || |||||||||||||||||| || ||||||| ||
Sbjct: 1086 gtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtct 1145
Query: 76 tcttcaggtcaatttcaccatggcagcaatggcaaccagaagcagcagagcagggtgaga 135
|||||||| |||||| | || || | |||||| ||||| ||||| ||||||||| ||| |
Sbjct: 1146 tcttcaggccaattttatcagggtaccaatggaaaccaaaagcaacagagcaggctgaaa 1205
Query: 136 gagggtaatacaaggctgcctttgtcaagggaggcttccttctcctcctccccacctagt 195
||||| | || ||||||||||| | || |||||||||| ||||||||||| ||||||
Sbjct: 1206 gaggg---tgcacggctgcctttgcctagagaggcttcctattcctcctcccctcctagt 1262
Query: 196 gtgacagttagagaagccaagcctcggcgcgcgccttcggtgccatcgcgggatgaggac 255
|||| |||||||||||||||||| |||| |||||||||| || || | || |||||
Sbjct: 1263 gtgatagttagagaagccaagccgaggcgttcgccttcggttccttctctagaagaggat 1322
Query: 256 gactccccctcgccgtgccggggtacctcctcggagacaatgtcgccggagtcggagcct 315
||||| || || ||| | | |||||||| ||||| |||||||| ||||||||||||
Sbjct: 1323 gactcaccagtgcaatgcagagttacctccttggagaacatgtcgccagagtcggagcct 1382
Query: 316 cagaggactgtcatgtcaaggg 337
|| || ||| || |||||||||
Sbjct: 1383 caaagaactctcttgtcaaggg 1404
Score = 83.8 bits (42), Expect = 2e-12
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 1075 aggtgcctgccccggacgccgatactgtcatcattcctgcacccgaagagcgaggcgcag 1134
|||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 2148 aggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggc---a 2204
Query: 1135 cagaagtccccggtatcggactgccggaggagctcctcggccgg 1178
|||||| ||| | || ||||||||||||||||| ||||||||
Sbjct: 2205 atgaagtcaccgatctccgactgccggaggagctcgtcggccgg 2248
Score = 75.8 bits (38), Expect = 4e-10
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 349 gaattcagggttttcaagcccaccggtttgatggatgccgcaactcaaaccgatgacctc 408
|||||||| |||| ||||||||| || | ||||||| ||||||||||| |||||||||
Sbjct: 1425 gaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctc 1484
Query: 409 aggaggagatccgctcggagagtacccgagatgcacaagaagagtctgagcaccgatcat 468
| || || || | |||| ||| ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 1485 ggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcat 1544
Query: 469 ga 470
||
Sbjct: 1545 ga 1546
Score = 65.9 bits (33), Expect = 4e-07
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1259 aggagaagctcgtcaagatcgaggaaagttaagtgct 1295
|||||||||||||||||||||| ||||||||||||||
Sbjct: 2344 aggagaagctcgtcaagatcgaagaaagttaagtgct 2380
Score = 60.0 bits (30), Expect = 3e-05
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1315 ctgggctgtcgtcgggagctcgtgtcgtgatccagtgcaccgtgccctgc 1364
||||||||||||| |||||||| |||||||| |||| ||| |||||||||
Sbjct: 2419 ctgggctgtcgtcaggagctcgagtcgtgattcagtacacggtgccctgc 2468
>emb|AL731865.9 | Mouse DNA sequence from clone RP23-100A9 on chromosome 11, complete
sequence
Length = 11674
Score = 42.1 bits (21), Expect = 6.3
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 324 tgtcatgtcaagggtgactccggct 348
|||||||||||||||||||| ||||
Sbjct: 6360 tgtcatgtcaagggtgactcaggct 6336
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 253,916,056
Number of extensions: 13750311
Number of successful extensions: 439429
Number of sequences better than 10.0: 35
Number of HSP's gapped: 439416
Number of HSP's successfully gapped: 76
Length of query: 1642
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1619
Effective length of database: 18,503,978,556
Effective search space: 29957941282164
Effective search space used: 29957941282164
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)