ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0188100:Os05g0188100 55 5e-08
2AK063680:Os12g0147200 35 0.044
3Os11g0149200:Os11g0149200 34 0.099
4AK121005:Os10g0376200 29 2.4
5AK107082:Os01g0719800 28 4.1
6AK119870: 28 5.4

>Os05g0188100:Os05g0188100 |
          Length = 89
 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
 Frame = +3

Query: 303 KKGGRGSKFTWEGVDGYTDEDLDLVA-------SKGPGTDACA-SGKNKS*GEGD 443
           KKGGRG KFTWEG DGY DEDLDL++       SK   + A A S  NK  G+ +
Sbjct: 35  KKGGRGGKFTWEGADGYADEDLDLISPKNSTSHSKSAASAAAADSSSNKKSGDDE 89



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>AK063680:Os12g0147200 |
          Length = 147

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 306 KGGRGSKFTWEGVDGYTDEDLD 371
           K GRG KFTWEG D   D  LD
Sbjct: 63  KSGRGGKFTWEGPDSIVDSQLD 84



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>Os11g0149200:Os11g0149200 |
          Length = 146

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +3

Query: 306 KGGRGSKFTWEGVDGYTDEDL 368
           K GRG KFTWEG DG  D  L
Sbjct: 65  KSGRGGKFTWEGPDGPVDAQL 85



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>AK121005:Os10g0376200 |
          Length = 644

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/64 (37%), Positives = 33/64 (51%)
 Frame = +3

Query: 339 GVDGYTDEDLDLVASKGPGTDACASGKNKS*GEGDALPHPPVAVRYIALISVLNRVSSSN 518
           G  GYT + L+    +GP T A A  KNK     D+ P P   V + A  S+ +R+S+  
Sbjct: 260 GGGGYTSDTLE----EGPAT-AAADRKNKKVMVDDSPPIPNQWVAFSADNSLHDRISAWV 314

Query: 519 NYID 530
           N ID
Sbjct: 315 NSID 318



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>AK107082:Os01g0719800 |
          Length = 394

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 414 GKNKS*GEGDALPHPPVA 467
           G +++ G+ DALPHPPVA
Sbjct: 148 GGDEAVGDADALPHPPVA 165



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>AK119870: |
          Length = 879

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 339 GVDGYTDEDLDLVASKGPGTDACASGKNKS*GEGDALP 452
           GV  YT  D D  +S+G   D  AS +  + G+ +A+P
Sbjct: 364 GVMRYTGSDDDAPSSRGDDDDDRASSRGSATGDDEAIP 401


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,407,793
Number of extensions: 374550
Number of successful extensions: 1219
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1219
Number of HSP's successfully gapped: 6
Length of query: 219
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 122
Effective length of database: 11,515,878
Effective search space: 1404937116
Effective search space used: 1404937116
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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