ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf94c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK058739:Os12g0548700 74 3e-14
2AK121693:Os12g0437800 69 1e-12
3AK063833:Os12g0437800 69 1e-12
4AK101295:Os12g0193100 58 3e-09
5AK062495:Os01g0615100 54 5e-08
6AJ601438:Os01g0615100 54 5e-08
7Os12g0548600:Os12g0548600 33 0.12
8AK109628:Os04g0389800 31 0.44
9Os03g0800200:Os03g0800200 30 0.57
10AK106329:Os01g0203300 29 1.3
11AK106457:Os01g0660300 28 2.8
12AK060506:Os02g0107300 28 3.7
13AK122147:Os12g0600200 27 4.8
14AK121690:Os01g0173900 27 4.8
15AK065460:Os02g0473000 27 4.8
16Os01g0230900:Os01g0230900 27 4.8
17AK067895:Os07g0568300 27 4.8
18AK067784:Os07g0568300 27 4.8
19AK066368:Os10g0182000 27 6.2
20Os01g0852100:Os01g0852100 27 6.3
21AK106070:Os06g0302000 27 6.3
22AK102327:Os11g0265400 27 8.1
23Os03g0705800:Os03g0705800 27 8.3
24AK106046:Os05g0360400 27 8.3
25AK073443:Os06g0160200 27 8.3
26AK073301:Os06g0171500 27 8.3
27AK067593:Os01g0574800 27 8.3 
>AK058739:Os12g0548700 |
          Length = 68
 Score = 74.3 bits (181), Expect = 3e-14
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = +2

Query: 110 SIGASSAKTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV-AV 286
           S G    KTSWPEVVG+ AE+AK++IL+D P+A + V+PV   V ++F PNRV + V  V
Sbjct: 2   SSGGEEGKTSWPEVVGLRAEEAKKVILKDMPDADIVVVPVGTPVTMDFRPNRVRIFVDTV 61

Query: 287 ARTPTVG 307
           A TPT+G
Sbjct: 62  AGTPTIG 68
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>AK121693:Os12g0437800 |
          Length = 65

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 119 ASSAKTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV-AVART 295
           +SSAKTSWPEVVG+S E+AK++IL+DKP+A + V+P    V  +F  NRV + V  VA T
Sbjct: 2   SSSAKTSWPEVVGLSIEEAKKVILKDKPDADIVVLPFGTAVPEDFRFNRVRIFVDTVAET 61

Query: 296 PTVG 307
           P VG
Sbjct: 62  PRVG 65
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>AK063833:Os12g0437800 |
          Length = 65

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 119 ASSAKTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV-AVART 295
           +SSAKTSWPEVVG+S E+AK++IL+DKP+A + V+P    V  +F  NRV + V  VA T
Sbjct: 2   SSSAKTSWPEVVGLSIEEAKKVILKDKPDADIVVLPFGTAVPEDFRFNRVRIFVDTVAET 61

Query: 296 PTVG 307
           P VG
Sbjct: 62  PRVG 65
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>AK101295:Os12g0193100 |
          Length = 84

 Score = 57.8 bits (138), Expect = 3e-09
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
 Frame = +2

Query: 113 IGASSAKTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV---- 280
           +  S+AK SWPE+VG+S+E AK  I  ++P   V+V+P DA V  +++  RV V V    
Sbjct: 16  VSPSAAKDSWPELVGVSSEAAKTKIGEERPELDVQVVPADAFVTTDYNAGRVRVFVDSDD 75

Query: 281 AVARTPTVG 307
            VAR P +G
Sbjct: 76  KVARPPKIG 84
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>AK062495:Os01g0615100 |
          Length = 72

 Score = 53.9 bits (128), Expect = 5e-08
 Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = +2

Query: 131 KTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV-AVARTPTVG 307
           KT WPE+VG++ E+AK  I  D+P+ QVEV+PV  ++     PNRV + V  VA  P +G
Sbjct: 13  KTEWPELVGLTIEQAKAKIKADRPDLQVEVLPVGTIILGVVVPNRVILWVDTVAEIPKIG 72
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>AJ601438:Os01g0615100 |
          Length = 72

 Score = 53.9 bits (128), Expect = 5e-08
 Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = +2

Query: 131 KTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV-AVARTPTVG 307
           KT WPE+VG++ E+AK  I  D+P+ QVEV+PV  ++     PNRV + V  VA  P +G
Sbjct: 13  KTEWPELVGLTIEQAKAKIKADRPDLQVEVLPVGTIILGVVVPNRVILWVDTVAEIPKIG 72
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>Os12g0548600:Os12g0548600 |
          Length = 163

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 225 GMTSTWALGLSRRMISLAFSADIPTTSGHDVLALLAP 115
           G T+  A G+S R+   A S   PTTSGHDV    +P
Sbjct: 35  GSTTMSASGMSLRITFFASSTGSPTTSGHDVFRSSSP 71
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>AK109628:Os04g0389800 |
          Length = 639

 Score = 30.8 bits (68), Expect = 0.44
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +1

Query: 166 REGQRDHPSGQAQCPGRGHPGRCDGPPELR---SQPCLRSRCRRQDP 297
           R G R HP G     GR   GR D PP +    ++   R   RR  P
Sbjct: 218 RPGARRHPQGHPAADGRAVLGRADAPPGVHLPAAEAAGRQPARRSHP 264
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>Os03g0800200:Os03g0800200 |
          Length = 1059

 Score = 30.4 bits (67), Expect = 0.57
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = +1

Query: 145 GGGRDVRREGQRDHPSGQAQCPGRGHPGRCDGPPELR 255
           GGGR  R   QR   SG+   PGRG  G   G P  R
Sbjct: 5   GGGRGGRGGEQRPPYSGRGDVPGRGGGGGGGGAPPYR 41
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>AK106329:Os01g0203300 |
          Length = 221

 Score = 29.3 bits (64), Expect = 1.3
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
 Frame = +1

Query: 136 IMAGGGRDVRREGQ-------RDHPSGQAQCPGRGHPGRCDGPPELRSQPCLRSRCRRQD 294
           + +  G D  R G        R  P  +A  P  G     DGPP+ R +P  R R R + 
Sbjct: 9   LSSAAGGDAARPGTLSSLFAPRSSPKPRAPRPEPG-----DGPPQERRKPRARPRPRSRQ 63

Query: 295 PYG 303
           P+G
Sbjct: 64  PWG 66
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>AK106457:Os01g0660300 |
          Length = 367

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 151 GRDVRREGQRDHPSGQAQCPGRGHPGRCDGPPELRSQPCLR 273
           GR  R E    H +G A+      P R  GPP ++++P LR
Sbjct: 9   GRGARGESGERHDAGSAR------PARQRGPPSIQTKPPLR 43
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>AK060506:Os02g0107300 |
          Length = 153

 Score = 27.7 bits (60), Expect = 3.7
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
 Frame = +1

Query: 79  CTEVPRAYRREHRG*QC*NIMAGGGRDVRREGQRDHPSGQAQCPGRGHPGRCDGPPELRS 258
           C  +P +   + R      +  GGG    R G+R   +   +       G  DG      
Sbjct: 64  CLSLPLSLGEQRR-----QLWRGGGGSCGRRGRRQLRAAGEESRTAAEGGEGDGVGAAAR 118

Query: 259 QPCLRSRCRRQDP-YGW 306
           +P  R  C R  P +GW
Sbjct: 119 RPTSRPPCARHGPHHGW 135
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>AK122147:Os12g0600200 |
          Length = 394

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 17/77 (22%), Positives = 35/77 (45%)
 Frame = +2

Query: 35  IIQSSLKNMSSMEGSVLKYPEPTEGSIGASSAKTSWPEVVGMSAEKAKEIILRDKPNAQV 214
           +++++ K  S    S  +  +PTE    A++++T           KA+E +L+ K   + 
Sbjct: 196 LVEAASKTKSYRSSSAARGNQPTESPSSANASRT-----------KAREYLLKSKVQDEK 244

Query: 215 EVIPVDAMVHLNFDPNR 265
           + +PV  +      P R
Sbjct: 245 KEVPVATVPFKRKGPGR 261
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>AK121690:Os01g0173900 |
          Length = 1505

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = -3

Query: 268 DTVGIEVQVDHRIDRDDLYLGIGLVPKDDLFGLLGGHPD---HLRP*CFS-TASPDAP 107
           DT+ + +Q    +DR   +L +  +P D +  L  G  D    +R  CFS  ASP+ P
Sbjct: 595 DTISMLIQTKVSLDRIASFLCLEELPTDAVLKLPSGSSDVAIEVRNGCFSWDASPEVP 652
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>AK065460:Os02g0473000 |
          Length = 490

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 77  SVLKYPEPTEGSIGASSAKTSWPEVVGMSAEKAKEIILRDKPNA 208
           SVLKY    +G I ASS   SW   V   + + +   LR + +A
Sbjct: 84  SVLKYAMTADGKIAASSGHASW---VSGKSSRGRVFELRGRSDA 124
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>Os01g0230900:Os01g0230900 |
          Length = 261

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +1

Query: 139 MAGGGRDVR-REGQRDH----PSGQAQCPGRGHPGRCDGPPELRSQP 264
           MAGG R  R R  +  H    PS Q  CP    P R   PP L + P
Sbjct: 158 MAGGRRGRRLRPSRGGHMEGPPSTQPPCPAPPRPPRPSPPPALPTPP 204
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>AK067895:Os07g0568300 |
          Length = 657

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 151 GRDVRREGQRDHPSGQAQCPGRGHPGRC 234
           G + RR   R HP     CP    PG C
Sbjct: 262 GENARRRDPRKHPYTAVPCPNFRRPGGC 289
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>AK067784:Os07g0568300 |
          Length = 657

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 151 GRDVRREGQRDHPSGQAQCPGRGHPGRC 234
           G + RR   R HP     CP    PG C
Sbjct: 262 GENARRRDPRKHPYTAVPCPNFRRPGGC 289
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>AK066368:Os10g0182000 |
          Length = 999

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 199 LVPKDD---LFGLLGGHPDHLRP*CFSTASPDAPFGRL 95
           +VP DD   LF   G   +  +P    TA+PDAP GRL
Sbjct: 79  VVPVDDPTLLFANAG--MNQFKPVFLGTAAPDAPLGRL 114
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>Os01g0852100:Os01g0852100 |
          Length = 333

 Score = 26.9 bits (58), Expect = 6.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 76  KCTEVPRAYRREHRG*QC*NIMAGGGRDVRREGQRDHPSGQAQCPGRGHPGRCDGP 243
           +CT   RA R   R  +C  ++    RD + E QR   +  A   G+ H G   GP
Sbjct: 273 ECTAPDRAARPAMR--RCAEVLWSIRRDFQHEQQRATAAAAAGARGKRHDGSTYGP 326
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>AK106070:Os06g0302000 |
          Length = 297

 Score = 26.9 bits (58), Expect = 6.3
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +1

Query: 142 AGGGRDVRREGQRDHPSGQAQCPGRGHPGRCDGPPELRSQPCLRSR 279
           AGGG    REG+  H    A+ P R  P     P  LR +P  R R
Sbjct: 98  AGGGAAPGREGRLRHLPRVARRPRRVAPRDARRPRVLRRRPSHRRR 143
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>AK102327:Os11g0265400 |
          Length = 328

 Score = 26.6 bits (57), Expect = 8.1
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 167 EKAKEIILRDKPNAQVEVIPVD 232
           E+ K  I+   PN++VEV+P+D
Sbjct: 82  ERVKHNIINKHPNSRVEVLPMD 103
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>Os03g0705800:Os03g0705800 |
          Length = 581

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 184 HPSGQAQCPGRGHPGRCDGPP----ELRSQPCLRSRCRRQD 294
           H SG  + P R  P     PP      R  PCL+ R RRQD
Sbjct: 303 HCSGGTRSPPRSFP-----PPLPSMSSRDAPCLQMRPRRQD 338
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>AK106046:Os05g0360400 |
          Length = 200

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +1

Query: 139 MAGGGRDVRREGQRDHPSGQAQCPGRGHPGRCD 237
           MA GG D   EG     S     PGR H  R D
Sbjct: 67  MASGGDDDEEEGASSSSSSADTSPGRHHQDRED 99
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>AK073443:Os06g0160200 |
          Length = 379

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
 Frame = -1

Query: 132 LALLAPMLPSVGSGY-----FSTLPSMEL 61
           L LL+P L SVGSGY     F+TL S  L
Sbjct: 84  LPLLSPYLQSVGSGYRHGANFATLASTAL 112
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>AK073301:Os06g0171500 |
          Length = 253

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +1

Query: 43  EFIEEHE-FHGGKCTEVPRAYRREHRG*QC*NIMAGGGRDVRREGQRDHPSGQAQCPGRG 219
           EF  +H  +H G     P A R E R        AGG + VR   +R    G A   GRG
Sbjct: 73  EFFAKHTVYHYGA---PPTAQRNEQRE------SAGGCQSVRGGVRRQPADGLAAAAGRG 123

Query: 220 H 222
           H
Sbjct: 124 H 124
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>AK067593:Os01g0574800 |
          Length = 291

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 24/73 (32%), Positives = 27/73 (36%)
 Frame = +1

Query: 88  VPRAYRREHRG*QC*NIMAGGGRDVRREGQRDHPSGQAQCPGRGHPGRCDGPPELRSQPC 267
           VP A  R   G     +  GGG  V   G      G A  P    PGR   PP  R +P 
Sbjct: 13  VPVAAARAANG-----VANGGGGGVGGGG-----GGGAARPPPMVPGRVPPPPMYRPKPM 62

Query: 268 LRSRCRRQDPYGW 306
                RR+   GW
Sbjct: 63  QAPARRRRSRRGW 75


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,897,367
Number of extensions: 369380
Number of successful extensions: 1127
Number of sequences better than 10.0: 27
Number of HSP's gapped: 1127
Number of HSP's successfully gapped: 27
Length of query: 155
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 63
Effective length of database: 11,716,083
Effective search space: 738113229
Effective search space used: 738113229
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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