ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91c17 |
|---|---|
| Clone Library Name | barley_pub |
>AK121301:Os02g0529400 | Length = 606 Score = 33.1 bits (74), Expect = 0.29 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = -2 Query: 627 RSARREAPHRGGPTRVAWEGRGSHGTVHGGRLIREPQRRVARS*GREAW 481 + A +A H G RV + G +G+V+G PQRR A S EAW Sbjct: 83 KDAVDKASHALGDVRVPGQAVGGNGSVNGSAAKPPPQRRKASSVEDEAW 131
>AK107635:Os09g0572500 | Length = 541 Score = 32.7 bits (73), Expect = 0.38 Identities = 37/134 (27%), Positives = 48/134 (35%), Gaps = 3/134 (2%) Frame = +1 Query: 484 SFPSLRPGHSPLRLPNQPPAMDGAMRTSALPRNSSRASPMRSFTASTPVVLAPPEVXXXX 663 S P+ P SP + PPA A TSA P S SP S +++ P AP Sbjct: 355 SSPTSSP--SPSTASSSPPASSPAPTTSASPSTSPSTSPPPSPSSTPPAPRAP------- 405 Query: 664 XXXXXXXXXXPLLCPVFG*REEVDRHHRAPPPRGPLKLVAEALTESLTWITEDVFPEIRL 843 CP G R R P P +EA T + + P L Sbjct: 406 AISSSSGSSSRTSCPCTGPRPRSSACSRPPAPTSGSSPTSEATPTPST--SSQLIPPPGL 463 Query: 844 ---PPPKATSRSSS 876 PPP +++SS Sbjct: 464 GGRPPPAPAAQASS 477
>Os03g0105500:Os03g0105500 | Length = 374 Score = 32.0 bits (71), Expect = 0.66 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +1 Query: 502 PGHSPLRLPNQPPAMDGAMRTSALPR---NSSRASPMRSFTASTPVVLAP 642 P S R PP+ G MR+S +P +SS SP S +AS VV +P Sbjct: 185 PTSSSHRSRTPPPSSGGGMRSSPMPAPSPSSSPVSPSASASASAAVVSSP 234
>AK103832:Os02g0484200 | Length = 434 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 499 RPGHSPLRLPNQPPAMDGAMRTSALPRNSSRA 594 +P PLRLP++ P DG R +PR RA Sbjct: 300 KPWPCPLRLPHRSPGADGTPRPRQVPRQLRRA 331
>AK105733:Os05g0475700 | Length = 432 Score = 30.8 bits (68), Expect = 1.5 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -2 Query: 627 RSARREAPHR-GGPTRVAWEGRGSHGTVHGGRLIREPQRRVARS*GREAWAPRKLALTRG 451 +SARR HR G RV G G GGR R +RR R A A +L Sbjct: 280 QSARRRRRHRRAGDGRVGARGGRGGGEQGGGRRRRRRERRPRRGRRHPAAAAARLLALLP 339 Query: 450 ELH 442 ELH Sbjct: 340 ELH 342
>AK120823:Os01g0780600 | Length = 425 Score = 30.4 bits (67), Expect = 1.9 Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Frame = -2 Query: 630 HRSARREAPHRGGPTR---VAWEGRGSHGTVHGGRLIREPQRRVARS*GREAWAPRKLAL 460 H+ R+APH P R V E + GGRL R P R R R+A R A Sbjct: 187 HQVPARDAPHGDAPPRQPAVPGEPGTADRRAAGGRLPRRPARPKPRLHRRDALRHRLRAE 246 Query: 459 TRGELH 442 G LH Sbjct: 247 DTGLLH 252
>AK119496:Os02g0456000 | Length = 229 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 9/67 (13%) Frame = +1 Query: 472 PRCPSFPSL---RPGHSPLRLPNQP------PAMDGAMRTSALPRNSSRASPMRSFTAST 624 PRCP P RP S R P+ P PA A TSA P ++ + + Sbjct: 37 PRCPPTPPPTPPRPSTSATRPPSSPSAPSPTPAPPPASSTSASPTSAPSTPASTRSSPAA 96 Query: 625 PVVLAPP 645 P APP Sbjct: 97 PTSTAPP 103
>AK103240:Os04g0690400 | Length = 742 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 178 PSPPRDRFVPERRQMRHHDRPRPSSVAGYI*PPP 279 P+P RDR P+R + HH+ P V ++ PPP Sbjct: 43 PNPHRDRRTPDRPRRHHHEDSLPLHV--HLPPPP 74
>AK102981:Os04g0690400 | Length = 742 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 178 PSPPRDRFVPERRQMRHHDRPRPSSVAGYI*PPP 279 P+P RDR P+R + HH+ P V ++ PPP Sbjct: 43 PNPHRDRRTPDRPRRHHHEDSLPLHV--HLPPPP 74
>AK109459:Os09g0246500 | Length = 309 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -2 Query: 204 HEPVTRRGGAASLEAPRGGEKTQESSRRYGATWVTHHGGA 85 H P +RR A L A R G SS +GA HG A Sbjct: 265 HSPTSRRRRQAGLRATRSGLPPARSSEEHGAGHSRRHGQA 304
>Os02g0164200:Os02g0164200 | Length = 140 Score = 29.6 bits (65), Expect = 3.3 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +1 Query: 475 RCPSFPSLRPGHSPLRLPNQPPAMD---GAMRTSALPRNSSRASPMRSFTA-STPV 630 RC S P+ RP SP+R P A A R P ++ ASP+ + TA ++PV Sbjct: 74 RCSSPPARRPSSSPVRALPLPAACAPPLPAARPPVAPPPTTAASPVAAITAVASPV 129
>Os01g0243900:Os01g0243900 | Length = 508 Score = 29.6 bits (65), Expect = 3.3 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Frame = +2 Query: 101 VTHVAPYLLELSWVFSPPRGASRLAAPPLRVTGSCQSADRCVTMTVLAPP----RWPAIY 268 V+H AP P G++ LAAPP A + TV APP W + Sbjct: 16 VSHPAP---------DAPAGSTVLAAPPCVSLDPAAPAHQQPADTVSAPPPPSSTWVILG 66 Query: 269 SLPRVS 286 S+PRVS Sbjct: 67 SIPRVS 72
>AK098963:Os06g0589300 | Length = 949 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 8/37 (21%) Frame = +2 Query: 194 TGSCQSA--------DRCVTMTVLAPPRWPAIYSLPR 280 TGSCQ+ D+ + + PP WPA+ LPR Sbjct: 78 TGSCQNVCGIQYSTLDQAGSCPIPNPPEWPALLQLPR 114
>AK065426:Os06g0589300 | Length = 949 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 8/37 (21%) Frame = +2 Query: 194 TGSCQSA--------DRCVTMTVLAPPRWPAIYSLPR 280 TGSCQ+ D+ + + PP WPA+ LPR Sbjct: 78 TGSCQNVCGIQYSTLDQAGSCPIPNPPEWPALLQLPR 114
>AK059417:Os07g0648700 | Length = 137 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = -3 Query: 863 EVAFGGGRRISGNTSSVIHVSDSVNASATNLSGPRGGGARWWRSTSSRQPNTGQRRG 693 EV GR+ S + H S + + +G RGGG S++ P+ +RRG Sbjct: 23 EVRTLSGRQTSTAMVLIAHAHTSCHRALAGTAGQRGGGEEAVVGGSTQGPSVARRRG 79
>Os05g0388400:Os05g0388400 | Length = 571 Score = 29.3 bits (64), Expect = 4.3 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Frame = +1 Query: 466 KFPRCPSFPSLRPGHSPLRL----PNQPPAMDGAMRTSALPRNSSRAS----PMRSFTAS 621 K P CPS + P PLR P PP + A + R S S P R TA Sbjct: 11 KGPACPSVCRVHPSIHPLRAFDPSPTAPPILADARAAAPAQRRRSTPSRIRAPRRRRTAV 70 Query: 622 TPVVLAPP 645 P APP Sbjct: 71 RP---APP 75
>Os04g0101800:Os04g0101800 | Length = 643 Score = 29.3 bits (64), Expect = 4.3 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 Query: 532 QPPAMDGAMRTSALPRNSSRASPMRSFTASTPVVLAPPE 648 +PPA +R A ++S A +R+ A P+ + PP+ Sbjct: 13 RPPAAASVVRAGAQEEDASAAGSLRAILAQIPLQIRPPQ 51
>AK110145:Os09g0535200 | Length = 861 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +1 Query: 490 PSLRPGHSPLRLPNQPPAMDGAMRTSALPRNSSRASPMRSFTASTPVVLAPP 645 P LR H P PPA + T P S P+ + A+ P ++APP Sbjct: 499 PHLRVRHMPAPPVPTPPAPAPPVSTLPSPAPSVHTPPVTAPPATAPPMIAPP 550
>AK109778:Os06g0360500 | Length = 150 Score = 29.3 bits (64), Expect = 4.3 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = -2 Query: 261 AGHRGGARTVMVTHLSALWHEPVTRRGGAASLE---APRGGEKTQESSRRYGA 112 AGH G R + V S RRGG A L A G E ++ S R+ GA Sbjct: 87 AGHEDGGRLLGVRRTSGRGVYGGDRRGGEAKLSGGGAGAGAEASERSERKAGA 139
>AK101153:Os03g0269900 | Length = 527 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = -3 Query: 851 GGGRRISGNTSSVIHVSDSVNASATNLSGPRGGGARWWRSTSSR 720 GG RR S T S H+ V ASA RG WWR R Sbjct: 87 GGARRRSPTTLS--HIVFGVGASARTWDKRRGYAELWWRPGEMR 128
>AK110410: | Length = 850 Score = 28.9 bits (63), Expect = 5.6 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +1 Query: 535 PPAMDGAMRTSALPRNSSRASPMRSFTASTPVVLAPP 645 PP+ + RTSA PRN SR S M A +++PP Sbjct: 219 PPSRTKSQRTSATPRNLSRRSSMDQDAA----MMSPP 251
>AK102856:Os02g0130900 | Length = 108 Score = 28.9 bits (63), Expect = 5.6 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Frame = +1 Query: 475 RCPSFPSLRPGH-SPLRLPNQ-----PPAMDGAMRTSALPRNSSRASPMRSFTASTPVVL 636 R S PS PG+ SP P++ PP + A + R++SR+S + +S P Sbjct: 33 RSSSSPSRSPGNQSPSGSPSRGCSSTPPPLPSAATRGTMSRSASRSSSPSTTPSSPPPSY 92 Query: 637 APP 645 PP Sbjct: 93 RPP 95
>AK067405:Os07g0522600 | Length = 637 Score = 28.9 bits (63), Expect = 5.6 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = +2 Query: 230 MTVLAPPRWPAIYSLPRVS*PHQQPLHSILVLPDPSNKIKELQFPYHGRHGRLGL 394 ++V+AP + ++S P S + LH ++ S K + FPYHG+ R+G+ Sbjct: 430 LSVVAPEK---LHSEPLDSSTNNIELHGVIWPGQTSEKPRGWVFPYHGKPLRIGV 481
>Os09g0371300:Os09g0371300 | Length = 507 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -3 Query: 539 GG*FGSRRGEWPGRR 495 GG G+RRG WPGRR Sbjct: 214 GGRRGTRRGSWPGRR 228
>AK110223:Os01g0329300 | Length = 759 Score = 28.5 bits (62), Expect = 7.3 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +1 Query: 472 PRCPSF--PSLRPGHSPLRLPNQPPAMDGAMRTSALPRNSSRASP 600 P PS P+ P HS + P+ PPA A+ + P S A+P Sbjct: 153 PPSPSLSPPAKAPSHSHAKTPSMPPAERPALPPTKAPAAISPATP 197 Score = 28.1 bits (61), Expect = 9.5 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Frame = +1 Query: 472 PRCPSFPSLRPGHSPLRLPNQPPAMDGAMRTSAL-PRNSSRASPMRSFTASTPVVLAPP 645 P P PS P H P P++PPA A +AL P A P A PP Sbjct: 219 PAEPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRPP 277
>AK099091:Os07g0247000 | Length = 361 Score = 28.5 bits (62), Expect = 7.3 Identities = 20/52 (38%), Positives = 21/52 (40%) Frame = -1 Query: 634 GPPECSP*SSASGRPD*SCVGGPRFSWHRPWRAADSGAAEASGPVVGTGSLG 479 G P SP S SG P S GGP + S ASGP G S G Sbjct: 258 GSPSSSPSGSPSGSPAGSPAGGPTAGGP---ASGPSSYGAASGPAEGPSSSG 306
>AK072232:Os07g0247000 | Length = 361 Score = 28.5 bits (62), Expect = 7.3 Identities = 20/52 (38%), Positives = 21/52 (40%) Frame = -1 Query: 634 GPPECSP*SSASGRPD*SCVGGPRFSWHRPWRAADSGAAEASGPVVGTGSLG 479 G P SP S SG P S GGP + S ASGP G S G Sbjct: 258 GSPSSSPSGSPSGSPAGSPAGGPTAGGP---ASGPSSYGAASGPAEGPSSSG 306
>AK072190:Os08g0301600 | Length = 138 Score = 28.1 bits (61), Expect = 9.4 Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -3 Query: 548 SMAGG*FGSRRGEWPGRRDGKLGHLGNLP*LGESYMEGWREN--GAPA 411 ++AGG GSRR PGRR G G G P L EG R G PA Sbjct: 40 TVAGG--GSRRRRPPGRRGG--GEQGRCPSLRRIQREGRRRQPVGVPA 83
>Os12g0541000:Os12g0541000 | Length = 299 Score = 28.1 bits (61), Expect = 9.5 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Frame = +1 Query: 742 HRAPPPRGPLKLVAEALTES--------LTWITEDVFPEIRLPPPKATSRSSSG 879 HR PPPR L + + L+ T I EDV R+ PP A G Sbjct: 51 HRLPPPRFSLSPIPKTLSSPSHVPVRSLFTGIVEDVGTVRRIGPPPAPPSGGGG 104
>Os12g0145600:Os12g0145600 | Length = 191 Score = 28.1 bits (61), Expect = 9.5 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +1 Query: 481 PSFPSLRPGHSPLRLPNQPPAMDGAMRTSALPRNSSRASPMRSFTASTP 627 P+ PS H +P++ P++ G + + +P N R SP AS+P Sbjct: 123 PNPPSEHRQHMASAIPDRRPSV-GRLHRTTIPENWPRTSPFHHPPASSP 170
>AK071918:Os07g0227200 | Length = 223 Score = 28.1 bits (61), Expect = 9.5 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +2 Query: 503 RATRLCGSRISRPPWTVP*EPRPSHATLVGPP 598 RA R CGS + PW P P+ +T PP Sbjct: 170 RARRCCGSSPTGRPWPSASPPTPTSSTASPPP 201
>AK071726:Os04g0692200 | Length = 319 Score = 28.1 bits (61), Expect = 9.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = +1 Query: 175 CPSPPRDRFVP---ERRQMRHHDRPRPSSVAGYI*PPP 279 C +PPR R P + R++RH +P G+ PPP Sbjct: 29 CAAPPRQRPPPGPTKHRRLRHDADAQPPRKRGHPPPPP 66
>AK060875:Os04g0692200 | Length = 319 Score = 28.1 bits (61), Expect = 9.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = +1 Query: 175 CPSPPRDRFVP---ERRQMRHHDRPRPSSVAGYI*PPP 279 C +PPR R P + R++RH +P G+ PPP Sbjct: 29 CAAPPRQRPPPGPTKHRRLRHDADAQPPRKRGHPPPPP 66
>AK059807:Os04g0692200 | Length = 319 Score = 28.1 bits (61), Expect = 9.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = +1 Query: 175 CPSPPRDRFVP---ERRQMRHHDRPRPSSVAGYI*PPP 279 C +PPR R P + R++RH +P G+ PPP Sbjct: 29 CAAPPRQRPPPGPTKHRRLRHDADAQPPRKRGHPPPPP 66 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,267,108 Number of extensions: 775677 Number of successful extensions: 3282 Number of sequences better than 10.0: 34 Number of HSP's gapped: 3268 Number of HSP's successfully gapped: 35 Length of query: 318 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 217 Effective length of database: 11,355,714 Effective search space: 2464189938 Effective search space used: 2464189938 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
