Clone Name | FLbaf91c17 |
---|---|
Clone Library Name | barley_pub |
>Q5R6Q7:SNX16_PONPY Sorting nexin-16 - Pongo pygmaeus (Orangutan)| Length = 344 Score = 33.9 bits (76), Expect = 1.0 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = +2 Query: 443 CSSPLVKASFLGAQASRPYDRATRLCGSRISRPPWTVP*EPRPSHATLVG 592 CSSPL++ F GA +S Y R + P TV E RPS T++G Sbjct: 68 CSSPLIRTKFTGAASSIEYSTRPR---ETEEQNPETVNWEDRPSTPTILG 114
>Q15735:PI5PA_HUMAN Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A - Homo| sapiens (Human) Length = 1006 Score = 33.5 bits (75), Expect = 1.3 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +1 Query: 472 PRCPSFPSLRPGHSPLRLPNQPPAMDGAMRTSALPRNSSRAS-PMRSFTASTPVVLAPPE 648 P+ P PS P HSP R P PPA D ALPR ++++ P R + + AP Sbjct: 342 PKPPRSPSRSPSHSPNRSPCVPPAPD-----MALPRLGTQSTGPGRCLSPNLQAQEAPAP 396 Query: 649 V 651 V Sbjct: 397 V 397
>P57768:SNX16_HUMAN Sorting nexin-16 - Homo sapiens (Human)| Length = 344 Score = 32.3 bits (72), Expect = 2.9 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = +2 Query: 443 CSSPLVKASFLGAQASRPYDRATRLCGSRISRPPWTVP*EPRPSHATLVG 592 CSSPL++ F G +S Y R + P TV E RPS T++G Sbjct: 68 CSSPLIRTKFTGTASSIEYSTRPR---DTEEQNPETVNWEDRPSTPTILG 114
>Q99LH4:ZN672_MOUSE Zinc finger protein 672 - Mus musculus (Mouse)| Length = 468 Score = 31.2 bits (69), Expect = 6.5 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = +1 Query: 466 KFPRCPSFPSLRPGHSPLRLPNQPPAMDGAMRTSALPRNSSRASPMRSFTASTP 627 +FP P+ R P P++ P + R SALP + +RA P T + P Sbjct: 108 RFPHVPALLLHRARQHPPEKPHRCPLCARSFRQSALPFHLARAHPPEIITVTAP 161
>Q9JLZ9:VAX2_RAT Ventral anterior homeobox 2 - Rattus norvegicus (Rat)| Length = 292 Score = 30.8 bits (68), Expect = 8.5 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +1 Query: 472 PRCPSFPSLRPGHSPLRLPNQPPAMDGAMRTSAL--PRNSS-RASPMRSFTASTPVVLAP 642 PR PS +L PG P + R ++L PRNSS R +PM S +AS+P L P Sbjct: 195 PRAPSLLALSPGL---------PGLTAGHRGTSLGDPRNSSQRLNPMPSASASSP--LPP 243 Query: 643 P 645 P Sbjct: 244 P 244
>Q9QX74:SHAN2_RAT SH3 and multiple ankyrin repeat domains protein 2 - Rattus norvegicus| (Rat) Length = 1474 Score = 30.8 bits (68), Expect = 8.5 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 499 RPGHSPLRLPNQPPAMDGAMRTSALPRNSSRASPMRSFTASTPV 630 +P HSP +P P +GA++ SA P + A+P R+ A+ V Sbjct: 965 KPDHSPSTVPEGVPKTEGALQISAAPEPA--AAPGRTIVAAGSV 1006 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 161,862,710 Number of extensions: 3640312 Number of successful extensions: 10077 Number of sequences better than 10.0: 6 Number of HSP's gapped: 10054 Number of HSP's successfully gapped: 6 Length of query: 318 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 205 Effective length of database: 69,691,104 Effective search space: 14286676320 Effective search space used: 14286676320 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)