ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf91c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 46 0.23
2gb|CP000454.1| Arthrobacter sp. FB24, complete genome 44 0.91
3gb|CP000302.1| Shewanella denitrificans OS217, complete genome 42 3.6
4gb|AC091905.3| Homo sapiens chromosome 5 clone RP11-191F9, compl... 42 3.6
5gb|AC163709.3| Gallus gallus BAC clone CH261-60F22 from chromoso... 42 3.6

>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738
 Score = 46.1 bits (23), Expect = 0.23
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 538     cccgccatggacggtgccatgag 560
               |||||||||||||||||||||||
Sbjct: 2085147 cccgccatggacggtgccatgag 2085125



to top

>gb|CP000454.1| Arthrobacter sp. FB24, complete genome
          Length = 4698945

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 725     aggaagtagaccgccaccatcg 746
               ||||||||||||||||||||||
Sbjct: 1482063 aggaagtagaccgccaccatcg 1482042



to top

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 921    ggcattttgtgtttttcaacc 941
              |||||||||||||||||||||
Sbjct: 885377 ggcattttgtgtttttcaacc 885357



to top

>gb|AC091905.3| Homo sapiens chromosome 5 clone RP11-191F9, complete sequence
          Length = 158741

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 291    ctcaccagcagcccctccact 311
              |||||||||||||||||||||
Sbjct: 111706 ctcaccagcagcccctccact 111726



to top

>gb|AC163709.3| Gallus gallus BAC clone CH261-60F22 from chromosome ul, complete sequence
          Length = 210984

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 337    caacaagatcaaagagctcca 357
              |||||||||||||||||||||
Sbjct: 166863 caacaagatcaaagagctcca 166883


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 136,964,728
Number of extensions: 7081588
Number of successful extensions: 132864
Number of sequences better than 10.0: 5
Number of HSP's gapped: 132864
Number of HSP's successfully gapped: 5
Length of query: 955
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 932
Effective length of database: 18,503,978,556
Effective search space: 17245708014192
Effective search space used: 17245708014192
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top