ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91b16 |
|---|---|
| Clone Library Name | barley_pub |
>P11768:PAT3_SOLTU Patatin class 1 precursor - Solanum tuberosum (Potato)| Length = 386 Score = 123 bits (309), Expect = 2e-27 Identities = 76/257 (29%), Positives = 136/257 (52%), Gaps = 6/257 (2%) Frame = +3 Query: 768 ALLRPKYDGEGLRKVVRGKLGDRKLKETVTNVIVPTFDIKRNQPVVFSTSKAQQDRVMNP 947 +++ P YDG+ L +V++ KLG+ ++ + +T V + +FDIK N+PV+F+ S + ++ Sbjct: 119 SIIGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDA 178 Query: 948 NLSDICIXXXXXXXXXXXHEFYIINLCPLNFELEEFNLIDAGM-FANNPTTVAMNEVWRM 1124 + DIC H F N ++ EFNL+D G+ +P ++++ R+ Sbjct: 179 KMYDICYSTAAAPIYFPPHYFITHT---SNGDIYEFNLVDGGVATVGDPALLSLSVATRL 235 Query: 1125 IDRGEHLPVEGLSPMDCSKLRILSVGTGV---VNHSYTADECNWWGVLPWMYNVRNKTQP 1295 E + +D ++ +LS+GTG + +YTA E WG L WM ++ T Sbjct: 236 AQ--EDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLAIQQMTNA 293 Query: 1296 LVDTLMYATGSLVDYNVALLFKSQGYEDHYLRIQEDHLDPSLGAMDDTS--SMEKLIETG 1469 A+ + DY ++ +F+++ +++YLR+QE+ L + MDD S +ME L++ G Sbjct: 294 -------ASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVG 346 Query: 1470 ENLLDRQVYRTDCETRE 1520 E LL + V + ET E Sbjct: 347 ETLLKKPVSKDSPETYE 363 Score = 104 bits (259), Expect = 2e-21 Identities = 48/96 (50%), Positives = 67/96 (69%) Frame = +3 Query: 66 AAAATKQDGELRILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTST 245 ++ K + + +L IDGGGI+G+IPA ILE+LE +LQ ++ + ARLADYFD I GTST Sbjct: 19 SSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTST 78 Query: 246 GALVTTMLAAPDKDNRPLCTAKEIIDLYLEEGAGIF 353 G L+T M+ P+++NRP AK+I+ Y E G IF Sbjct: 79 GGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF 114
>P15476:PAT1_SOLTU Patatin B1 precursor - Solanum tuberosum (Potato)| Length = 377 Score = 122 bits (307), Expect = 4e-27 Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 6/257 (2%) Frame = +3 Query: 768 ALLRPKYDGEGLRKVVRGKLGDRKLKETVTNVIVPTFDIKRNQPVVFSTSKAQQDRVMNP 947 ++ P+YDG+ L +V++ KLG+ ++ + +T V + +FDIK N+PV+F+ S + ++ Sbjct: 110 SIFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDA 169 Query: 948 NLSDICIXXXXXXXXXXXHEFYIINLCPLNFELEEFNLIDAGM-FANNPTTVAMNEVWRM 1124 + DIC H F N EFNL+D G+ +P ++++ R+ Sbjct: 170 KMYDICYSIAAAPIYFPPHHFVTHT---SNGATYEFNLVDGGVATVGDPALLSLSVATRL 226 Query: 1125 IDRGEHLPVEGLSPMDCSKLRILSVGTGV---VNHSYTADECNWWGVLPWMYNVRNKTQP 1295 E + +D ++ +LS+GTG + +YTA+E WG L WM ++ T Sbjct: 227 AQ--EDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLAIQQLTNA 284 Query: 1296 LVDTLMYATGSLVDYNVALLFKSQGYEDHYLRIQEDHLDPSLGAMDDTS--SMEKLIETG 1469 A+ + DY ++ +F+++ +++YLR+QE+ L + MDD S +ME L++ G Sbjct: 285 -------ASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVG 337 Query: 1470 ENLLDRQVYRTDCETRE 1520 E LL + V + ET E Sbjct: 338 ETLLKKPVSKDSPETYE 354 Score = 104 bits (259), Expect = 2e-21 Identities = 48/96 (50%), Positives = 67/96 (69%) Frame = +3 Query: 66 AAAATKQDGELRILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTST 245 ++ K + + +L IDGGGI+G+IPA ILE+LE +LQ ++ + ARLADYFD I GTST Sbjct: 10 SSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTST 69 Query: 246 GALVTTMLAAPDKDNRPLCTAKEIIDLYLEEGAGIF 353 G L+T M+ P+++NRP AK+I+ Y E G IF Sbjct: 70 GGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF 105
>P15477:PAT2_SOLTU Patatin B2 precursor - Solanum tuberosum (Potato)| Length = 386 Score = 121 bits (304), Expect = 9e-27 Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 6/257 (2%) Frame = +3 Query: 768 ALLRPKYDGEGLRKVVRGKLGDRKLKETVTNVIVPTFDIKRNQPVVFSTSKAQQDRVMNP 947 ++L P YDG+ L +V++ KLG+ ++ + +T V + +FDIK N+PV+F+ S + ++ Sbjct: 119 SILGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDA 178 Query: 948 NLSDICIXXXXXXXXXXXHEFYIINLCPLNFELEEFNLIDAGM-FANNPTTVAMNEVWRM 1124 + DIC H F N EFNL+D + +P ++++ R+ Sbjct: 179 KMYDICYSTAAAPIYFPPHHFVTHT---SNGARYEFNLVDGAVATVGDPALLSLSVATRL 235 Query: 1125 IDRGEHLPVEGLSPMDCSKLRILSVGTGV---VNHSYTADECNWWGVLPWMYNVRNKTQP 1295 E + +D ++ +LS+GTG + +YTA+E WG L WM ++ T Sbjct: 236 AQ--EDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLAIQQMTNA 293 Query: 1296 LVDTLMYATGSLVDYNVALLFKSQGYEDHYLRIQEDHLDPSLGAMDDTS--SMEKLIETG 1469 A+ + DY ++ +F+++ +++YLR+QE+ L+ + MDD S +ME L++ G Sbjct: 294 -------ASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVG 346 Query: 1470 ENLLDRQVYRTDCETRE 1520 E LL + V + ET E Sbjct: 347 ETLLKKPVSKDSPETYE 363 Score = 104 bits (259), Expect = 2e-21 Identities = 48/96 (50%), Positives = 67/96 (69%) Frame = +3 Query: 66 AAAATKQDGELRILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTST 245 ++ K + + +L IDGGGI+G+IPA ILE+LE +LQ ++ + ARLADYFD I GTST Sbjct: 19 SSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTST 78 Query: 246 GALVTTMLAAPDKDNRPLCTAKEIIDLYLEEGAGIF 353 G L+T M+ P+++NRP AK+I+ Y E G IF Sbjct: 79 GGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF 114
>P07745:PAT0_SOLTU Patatin precursor - Solanum tuberosum (Potato)| Length = 386 Score = 120 bits (300), Expect = 3e-26 Identities = 74/257 (28%), Positives = 134/257 (52%), Gaps = 6/257 (2%) Frame = +3 Query: 768 ALLRPKYDGEGLRKVVRGKLGDRKLKETVTNVIVPTFDIKRNQPVVFSTSKAQQDRVMNP 947 ++ P+YDG+ L +V++ KLG+ ++ + +T V + +FDIK N+PV+F+ S + ++ Sbjct: 119 SIFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDA 178 Query: 948 NLSDICIXXXXXXXXXXXHEFYIINLCPLNFELEEFNLIDAGM-FANNPTTVAMNEVWRM 1124 + DIC H F N EFNL+D + +P ++++ R+ Sbjct: 179 KMYDICYSTAAAPIYFPPHHFVTHT---SNGATYEFNLVDGAVATVGDPALLSLSVATRL 235 Query: 1125 IDRGEHLPVEGLSPMDCSKLRILSVGTGV---VNHSYTADECNWWGVLPWMYNVRNKTQP 1295 + + +D ++ +LS+GTG + +YTA+E WG L WM ++ T Sbjct: 236 AQ--DDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLAIQQMTNA 293 Query: 1296 LVDTLMYATGSLVDYNVALLFKSQGYEDHYLRIQEDHLDPSLGAMDDTS--SMEKLIETG 1469 A+ + DY ++ +F+++ +++YLR+QE+ L + MDD S +ME L++ G Sbjct: 294 -------ASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVG 346 Query: 1470 ENLLDRQVYRTDCETRE 1520 E LL + V + ET E Sbjct: 347 ETLLKKPVSKDSPETYE 363 Score = 103 bits (256), Expect = 3e-21 Identities = 47/84 (55%), Positives = 62/84 (73%) Frame = +3 Query: 102 ILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTSTGALVTTMLAAPD 281 +L IDGGGI+G+IPA ILE+LE +LQ ++ + ARLADYFD I GTSTG L+T M+ P+ Sbjct: 31 VLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPN 90 Query: 282 KDNRPLCTAKEIIDLYLEEGAGIF 353 ++NRP AK+I+ Y E G IF Sbjct: 91 ENNRPFAAAKDIVPFYFEHGPHIF 114
>P15478:PAT5_SOLTU Patatin T5 precursor - Solanum tuberosum (Potato)| Length = 386 Score = 112 bits (280), Expect = 6e-24 Identities = 70/257 (27%), Positives = 136/257 (52%), Gaps = 6/257 (2%) Frame = +3 Query: 768 ALLRPKYDGEGLRKVVRGKLGDRKLKETVTNVIVPTFDIKRNQPVVFSTSKAQQDRVMNP 947 ++ PKYDG+ L +V++ KLG+ ++ + +T V + +FDIK N+PV+F+ S + ++ Sbjct: 119 SIFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDA 178 Query: 948 NLSDICIXXXXXXXXXXXHEFYIINLCPLNFELEEFNLIDAGM-FANNPTTVAMNEVWRM 1124 + DIC H ++ N N + EFNL+D + ++P ++++ ++ Sbjct: 179 KMYDICYSTAAAPTFFPPH-YFATNTS--NGDKYEFNLVDGAVATVDDPALLSISVATKL 235 Query: 1125 IDRGEHLPVEGLSPMDCSKLRILSVGTGVVNH---SYTADECNWWGVLPWMYNVRNKTQP 1295 + ++ ++ +LS+GTG + +YTA+E WG WM ++ T Sbjct: 236 AQVDPKF--ASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKWGTARWMLVIQKMTSA 293 Query: 1296 LVDTLMYATGSLVDYNVALLFKSQGYEDHYLRIQEDHLDPSLGAMDDTS--SMEKLIETG 1469 A+ + DY ++ F++ +++YLR+QE+ L + +DD S +M+ L++ G Sbjct: 294 -------ASSYMTDYYLSTAFQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVG 346 Query: 1470 ENLLDRQVYRTDCETRE 1520 E+LL + V + + ET E Sbjct: 347 EDLLKKSVSKDNPETYE 363 Score = 103 bits (257), Expect = 3e-21 Identities = 47/84 (55%), Positives = 62/84 (73%) Frame = +3 Query: 102 ILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTSTGALVTTMLAAPD 281 +L IDGGGI+G+IPA ILE+LE +LQ ++ ++ ARLADYFD I GTSTG L+T M+ P+ Sbjct: 31 VLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMITTPN 90 Query: 282 KDNRPLCTAKEIIDLYLEEGAGIF 353 + NRP AK+I+ Y E G IF Sbjct: 91 ETNRPFAAAKDIVPFYFEHGPKIF 114
>O60733:PA2G6_HUMAN 85 kDa calcium-independent phospholipase A2 - Homo sapiens (Human)| Length = 806 Score = 43.5 bits (101), Expect = 0.003 Identities = 23/52 (44%), Positives = 34/52 (65%) Frame = +3 Query: 102 ILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTSTGALV 257 +LC+DGGG++GLI I++ L A IE +S D FD++ GTSTG ++ Sbjct: 480 LLCLDGGGVKGLI---IIQLLIA----IEKASGVATKDLFDWVAGTSTGGIL 524
>P97570:PA2G6_RAT 85 kDa calcium-independent phospholipase A2 - Rattus norvegicus| (Rat) Length = 751 Score = 43.1 bits (100), Expect = 0.004 Identities = 22/52 (42%), Positives = 34/52 (65%) Frame = +3 Query: 102 ILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTSTGALV 257 +LC+DGGG++GL+ I++ L A IE +S D FD++ GTSTG ++ Sbjct: 425 LLCLDGGGVKGLV---IIQLLIA----IEKASGVATKDLFDWVAGTSTGGIL 469 Score = 32.3 bits (72), Expect = 7.4 Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 9/164 (5%) Frame = +3 Query: 1062 IDAGMFANNPTTVAMNEVWR----MIDRGEHLPVEGLSPMDCSKLRILSVGTG-----VV 1214 +D G+ ANNPT AM E+ MI +G+ V+ LS ++S+GTG V Sbjct: 596 LDGGLLANNPTLDAMTEIHEYNQDMIRKGQGNKVKKLS-------IVVSLGTGKSPQVPV 648 Query: 1215 NHSYTADECNWWGVLPWMYNVRNKTQPLVDTLMYATGSLVDYNVALLFKSQGYEDHYLRI 1394 N W + ++ + + +VD G VD A + I Sbjct: 649 TCVDVFRPSNPWELAKTVFGAKELGKMVVDCCTDPDGRAVDRARAWC--------EMVGI 700 Query: 1395 QEDHLDPSLGAMDDTSSMEKLIETGENLLDRQVYRTDCETREYR 1526 Q L+P LG S L E + +L ++ T+ EYR Sbjct: 701 QYFRLNPQLG------SDIMLDEVSDAVLVNALWETEVYIYEYR 738
>P97819:PA2G6_MOUSE 85 kDa calcium-independent phospholipase A2 - Mus musculus (Mouse)| Length = 752 Score = 43.1 bits (100), Expect = 0.004 Identities = 22/52 (42%), Positives = 34/52 (65%) Frame = +3 Query: 102 ILCIDGGGIRGLIPAKILEYLEAELQRIEGSSTARLADYFDYIVGTSTGALV 257 +LC+DGGG++GL+ I++ L A IE +S D FD++ GTSTG ++ Sbjct: 426 LLCLDGGGVKGLV---IIQLLIA----IEKASGVATKDLFDWVAGTSTGGIL 470
>P0C348:RF2_PSEAE Peptide chain release factor 2 - Pseudomonas aeruginosa| Length = 363 Score = 38.1 bits (87), Expect = 0.14 Identities = 42/145 (28%), Positives = 48/145 (33%), Gaps = 16/145 (11%) Frame = +2 Query: 1097 GGDERGLEDDRPGRAPAGGGVIAHGLQQAAHPLRRHRRGEPLLHGRRVQLVGCPPVDVQR 1276 GG G D RPGR P G HG + RR R R + G PP VQR Sbjct: 63 GGGNPGRPDQRPGRLPRPAG---HGGRGRRRGRRRRRCQRSRASARDPREAGVPP-HVQR 118 Query: 1277 ---PQQN-------------PAAGRHAXXXXXXXXXXXXXXXXXXXGLRGPLLAHPGGSP 1408 P+Q P G+HA +RG H G Sbjct: 119 RDGPEQRLPGHPGRLRRHRGPGLGQHAAAHVPALGRQARLRRHYHRAVRGRGRRHQGRHR 178 Query: 1409 GPFSWSHGRHQQHGEAHRDRGEPPG 1483 GR + AHRDR PPG Sbjct: 179 A----HQGRVRLRLAAHRDRRAPPG 199
>P47708:RP3A_MOUSE Rabphilin-3A - Mus musculus (Mouse)| Length = 681 Score = 36.2 bits (82), Expect = 0.51 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 10/85 (11%) Frame = -2 Query: 810 PCGAPXXXXXXXXXXXXRNPGSAASCAGPPRTP*CTHRKASSPAPDPAHG---------- 661 P AP PG + + GP R P + +P DP + Sbjct: 277 PAPAPVPSPAPPQPVQPGPPGGSRATPGPGRFP---EQSTEAPPSDPGYPGAVAPAREER 333 Query: 660 TSPAGWLQHVPGCSPPYSPAAPHRR 586 T PAG Q P + PYS AAP R+ Sbjct: 334 TGPAGGFQAAPHTAAPYSQAAPARQ 358
>Q8IYB3:SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 - Homo sapiens (Human)| Length = 904 Score = 34.7 bits (78), Expect = 1.5 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = +2 Query: 1067 RRHVRQQSDHGGDERGLEDDRPGRAPAGGGVIA----HGLQQAAHPLRRHRRGEPLLHGR 1234 RR +Q S G ED+RP R+ G + H ++A P R R+ E GR Sbjct: 486 RRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGR 545 Query: 1235 RVQLVGCPPVDVQR 1276 R + PP +R Sbjct: 546 RRRSPSPPPTRRRR 559
>O34779:PRPC_BACSU Protein phosphatase prpC - Bacillus subtilis| Length = 254 Score = 34.3 bits (77), Expect = 1.9 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 8/170 (4%) Frame = +3 Query: 1068 AGMFANNPTTVAMNEVWRMIDRGEHLPVEGLSPMDCSKL---RILSVGTGVVNHSYTADE 1238 AG A+ AM E W + E +P +P +C K +ILSV + + +H+ +E Sbjct: 43 AGDVASKMAVKAMGEKW---NEAETIPT---APSECEKWLIEQILSVNSKIYDHAQAHEE 96 Query: 1239 CNWWGVLPWMYNVRNKTQPLVDTLMYATGSLVDYNVALLFKSQGY---EDHYLRIQEDHL 1409 C G T++ A + +VA + S+ Y +D ++++ EDH Sbjct: 97 CQGMGT----------------TIVCALFTGKTVSVAHIGDSRCYLLQDDDFVQVTEDH- 139 Query: 1410 DPSLGAMDDTSSMEKLIETGENLLDRQVYRTDCETREYRPV--KGAGTNK 1553 S + +L+ TGE + R D E + V K GT++ Sbjct: 140 ----------SLVNELVRTGE------ISREDAEHHPRKNVLTKALGTDQ 173
>P17600:SYN1_HUMAN Synapsin-1 - Homo sapiens (Human)| Length = 705 Score = 34.3 bits (77), Expect = 2.0 Identities = 25/61 (40%), Positives = 28/61 (45%) Frame = -2 Query: 732 AGPPRTP*CTHRKASSPAPDPAHGTSPAGWLQHVPGCSPPYSPAAPHRRCSLHRQGHGVP 553 AGPP+ T S PAP A G P G + P PP PA P R+ S Q VP Sbjct: 558 AGPPQATRQT--SVSGPAPPKASGAPPGGQQRQGPPQKPP-GPAGPTRQAS---QAGPVP 611 Query: 552 R 550 R Sbjct: 612 R 612
>P47709:RP3A_RAT Rabphilin-3A - Rattus norvegicus (Rat)| Length = 684 Score = 34.3 bits (77), Expect = 2.0 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Frame = -2 Query: 753 PGSAASCAGPPRTP*CTHRKASSPAPDPAHG----------TSPAGWLQHVPGCSPPYSP 604 PG + + GP R P + +P DP + T P G Q P + PYS Sbjct: 299 PGGSRAAPGPGRFP---EQSTEAPPSDPGYPGAVAPAREERTGPTGGFQAAPHTAGPYSQ 355 Query: 603 AAPHRR 586 AAP R+ Sbjct: 356 AAPARQ 361
>P17589:LRP2_HHV1F Latency-related protein 2 - Human herpesvirus 1 (strain F) (HHV-1)| (Human herpes simplex virus 1) Length = 107 Score = 34.3 bits (77), Expect = 2.0 Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -2 Query: 723 PRTP*CTHRKASSP----APDPAHGTSPAGWLQHVPGCSPPYSPAAPHRRCSLHRQG 565 PRTP TH + +P P PAH S A L P + P+S A P R HRQG Sbjct: 6 PRTPTPTHPHSHAPPLPRTPTPAHPHSHAPPLPRTPTPTHPHSHAPP--RSIQHRQG 60
>Q9CSN1:SNW1_MOUSE SNW domain-containing protein 1 - Mus musculus (Mouse)| Length = 536 Score = 33.9 bits (76), Expect = 2.5 Identities = 22/87 (25%), Positives = 40/87 (45%) Frame = -3 Query: 860 VGDGFLKLAVAEFPSDHLAEPLAVVLGAEQRVPDEIRVQQRHAQALHELLDALIERRRVQ 681 + + F KLA A + +D A E R E ++ Q+ + E L + ++ R + Sbjct: 280 INENFAKLAEALYIADRKARE-----AVEMRAQVERKMAQKEKEKHEEKLREMAQKARER 334 Query: 680 RQTLRTAHRLQDGSSMFLDAVLHIRRR 600 R ++T +DG + D + H RR+ Sbjct: 335 RAGIKTHVEKEDGEARERDEIRHDRRK 361
>Q13573:SNW1_HUMAN SNW domain-containing protein 1 - Homo sapiens (Human)| Length = 536 Score = 33.9 bits (76), Expect = 2.5 Identities = 22/87 (25%), Positives = 40/87 (45%) Frame = -3 Query: 860 VGDGFLKLAVAEFPSDHLAEPLAVVLGAEQRVPDEIRVQQRHAQALHELLDALIERRRVQ 681 + + F KLA A + +D A E R E ++ Q+ + E L + ++ R + Sbjct: 280 INENFAKLAEALYIADRKARE-----AVEMRAQVERKMAQKEKEKHEEKLREMAQKARER 334 Query: 680 RQTLRTAHRLQDGSSMFLDAVLHIRRR 600 R ++T +DG + D + H RR+ Sbjct: 335 RAGIKTHVEKEDGEARERDEIRHDRRK 361
>Q63003:5E5_RAT 5E5 antigen - Rattus norvegicus (Rat)| Length = 825 Score = 33.9 bits (76), Expect = 2.5 Identities = 34/107 (31%), Positives = 41/107 (38%) Frame = +2 Query: 497 PHPRRADPRQRWRPAAASRGTP*P*RCSEQRR*GAAGEYGGLHPGTCWSHPAGDVPCAGS 676 P A PR+ W P+ RG P R +RR G G G T S A P + Sbjct: 414 PRGWEAGPRE-WGPSPGGRGDG-PRRRPRKRR-GRKGRMGRQLETTATSASATGGPAEEA 470 Query: 677 GAGLDAFR*VHQGVRGGPAHDAAEPGFRQVRAAPPQVRRRGAPQGGQ 817 GA +G GG A +Q R RRRG PQ G+ Sbjct: 471 GASAP------EGQAGGGPRGRARGPRQQARRRHGPQRRRGPPQAGE 511
>P04052:RPB1_DROME DNA-directed RNA polymerase II subunit RPB1 - Drosophila melanogaster| (Fruit fly) Length = 1887 Score = 33.5 bits (75), Expect = 3.3 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -2 Query: 756 NPGSAASCAGPPRTP*CTHRKASSPAPDPAHGTSPAGWLQHVPGCSPPYSPAAPH 592 +PGS+ S GP +P + SP+ P TSP G SP YSP++P+ Sbjct: 1553 HPGSSPSSPGPSMSPYFPASPSVSPSYSP---TSPNYTASSPGGASPNYSPSSPN 1604
>Q64ZA7:NRFA_BACFR Cytochrome c-552 precursor - Bacteroides fragilis| Length = 493 Score = 33.1 bits (74), Expect = 4.3 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Frame = +2 Query: 617 GLHPGTCWSHPAGDVPCAGSGAGLDAFR*VHQGVRGGP------AHDAAEPGFRQVRAAP 778 G P TCW+ + DVP G+D+F G G D EP ++ + Sbjct: 138 GPQPSTCWTCKSPDVPRMMEAIGVDSFYNNKWGAFGSEIVNPIGCADCHEPTNMKLHISR 197 Query: 779 PQVRRRGAPQGGQRETRRPQ 838 P +R A QG + PQ Sbjct: 198 PALREAFARQGKDIDKATPQ 217
>Q5LI95:NRFA_BACFN Cytochrome c-552 precursor - Bacteroides fragilis (strain ATCC| 25285 / NCTC 9343) Length = 493 Score = 33.1 bits (74), Expect = 4.3 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Frame = +2 Query: 617 GLHPGTCWSHPAGDVPCAGSGAGLDAFR*VHQGVRGGP------AHDAAEPGFRQVRAAP 778 G P TCW+ + DVP G+D+F G G D EP ++ + Sbjct: 138 GPQPSTCWTCKSPDVPRMMEAIGVDSFYNNKWGAFGSEIVNPIGCADCHEPTNMKLHISR 197 Query: 779 PQVRRRGAPQGGQRETRRPQ 838 P +R A QG + PQ Sbjct: 198 PALREAFARQGKDIDKATPQ 217
>Q64298:MCSP_RAT Sperm mitochondrial-associated cysteine-rich protein - Rattus| norvegicus (Rat) Length = 145 Score = 33.1 bits (74), Expect = 4.3 Identities = 20/72 (27%), Positives = 25/72 (34%) Frame = -2 Query: 810 PCGAPXXXXXXXXXXXXRNPGSAASCAGPPRTP*CTHRKASSPAPDPAHGTSPAGWLQHV 631 PC P ++P S PP++P CT + P P P T PA Sbjct: 14 PCCPPKPCCPPKPCCLQKSPCCPKSPCCPPKSPCCTPKVCPCPTPCPCPATCPAAC---- 69 Query: 630 PGCSPPYSPAAP 595 C P P P Sbjct: 70 -ACPCPMKPCCP 80
>P16736:HELI_HCMVA Probable ATP-dependent helicase UL105 - Human cytomegalovirus| (strain AD169) (HHV-5) (Human herpesvirus 5) Length = 956 Score = 32.7 bits (73), Expect = 5.7 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 11/98 (11%) Frame = +3 Query: 6 STSTLAAATHKVERSIQMAPAAAATKQDGELRILCIDG-----------GGIRGLIPAKI 152 S +T AAAT V S + AAAA+ + G R+ C+D G G Sbjct: 70 SAATTAAATTTVHSSASSSAAAAASSEAGGTRVPCVDRWPFFPFRALLVTGTAGAGKTSS 129 Query: 153 LEYLEAELQRIEGSSTARLADYFDYIVGTSTGALVTTM 266 ++ L A L + +T A I+ + A V T+ Sbjct: 130 IQVLAANLDCVITGTTVIAAQNLSAILNRTRSAQVKTI 167
>P09951:SYN1_RAT Synapsin-1 - Rattus norvegicus (Rat)| Length = 704 Score = 32.7 bits (73), Expect = 5.7 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = -2 Query: 732 AGPPRTP*CTHRKASSPAPDPAHGTSPAGWLQHVPGCSPPYSPAAPHRRCS 580 AGPP+ S PAP G SP G + P PP PA P R+ S Sbjct: 556 AGPPQAT--RQASISGPAPPKVSGASPGGQQRQGPPQKPP-GPAGPIRQAS 603
>Q8XAU9:RUTE_ECO57 Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE - Escherichia| coli O157:H7 Length = 196 Score = 32.3 bits (72), Expect = 7.4 Identities = 28/80 (35%), Positives = 35/80 (43%) Frame = -1 Query: 1282 LRTLYIHGRTPHQLHSSAV*EWFTTPVPTERMRSLLQSMGDNPSTGRCSPRSIILQTSFI 1103 L TL+ RT H+ W TPV E +R L M P++ CSP I+ FI Sbjct: 10 LSTLFTDART----HNG----WRETPVSDETLRELYALMKWGPTSANCSPARIV----FI 57 Query: 1102 ATVVGLLANMPASIRLNSSN 1043 T G PA L+S N Sbjct: 58 RTAEGKERLRPA---LSSGN 74
>Q5YSC6:IF2_NOCFA Translation initiation factor IF-2 - Nocardia farcinica| Length = 969 Score = 32.0 bits (71), Expect = 9.7 Identities = 40/129 (31%), Positives = 49/129 (37%), Gaps = 3/129 (2%) Frame = +2 Query: 455 RHARSRVGHRALAP-PHPRRADPRQRWRPAAASRGTP*P*RCSEQRR*GAAGEYGGLHPG 631 R A ++ G R P P P PR P A + TP P + R G G PG Sbjct: 230 RPAAAQGGPRPGGPRPSPGSMPPRPN--PGAMPQRTPRPGPSAGGRPGRPGGAPGAGRPG 287 Query: 632 TCWSHPAGDVPCAGSGAGLDAFR*VHQGVRGGPAHDAAEPGFRQVR--AAPPQVRRRGAP 805 G G+GAG A G RG P PG R AA R GAP Sbjct: 288 GGGGGYRGGGGAPGAGAGAPA----GGGFRGRPGGGGGRPGGPGGRGGAAGAFGRPGGAP 343 Query: 806 QGGQRETRR 832 + G++ R+ Sbjct: 344 RRGRKSKRQ 352 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 311,470,243 Number of extensions: 7010159 Number of successful extensions: 25131 Number of sequences better than 10.0: 26 Number of HSP's gapped: 25007 Number of HSP's successfully gapped: 32 Length of query: 656 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 536 Effective length of database: 67,771,039 Effective search space: 36325276904 Effective search space used: 36325276904 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
