ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf94a16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067991:Os03g0128500 | 766 | 0.0 | 2 | AB037900:Os03g0128500 | 766 | 0.0 | 3 | AK119943: | 31 | 2.4 | 4 | Os10g0151500:Os10g0151500 | 31 | 3.1 | 5 | AK110008: | 30 | 5.4 | 6 | AK059168:Os03g0844600 | 30 | 5.4 | 7 | AK105531:Os06g0704500 | 30 | 7.0 | 8 | AK069762:Os03g0269100 | 29 | 9.2 | 9 | AK058655:Os03g0269100 | 29 | 9.2 |
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>AK067991:Os03g0128500 | Length = 429 Score = 766 bits (1979), Expect = 0.0 Identities = 368/429 (85%), Positives = 398/429 (92%) Frame = +2 Query: 194 MERKQADYSNLDERYTIQGERYQGQQYSHIYYTRLHHMRTLLHALVPSRKPHLPVTTVLG 373 MERKQA+YSNLDERY IQGE+YQGQQYSHIY+TRLHHMR LLHALVPS KPHLPVTTVLG Sbjct: 1 MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60 Query: 374 LEKGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVAL 553 LE+GKDC++VGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMH DD+LILEDESGRV L Sbjct: 61 LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL 120 Query: 554 AGAIPPAAYVTGVVVALHGKETSAGNFLVEDVMEAGLPPQSVLPCINEDKYXXXXXXXXX 733 AGAIPPAAYVTGVV+ALHGKETSAGNFLVED++EAG+PPQ LP INEDKY Sbjct: 121 AGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSINEDKYVVFVSGLSI 180 Query: 734 XXXTFNPLQFQLLIDHITGHLGDENEQTIASKIVRVVVAGNSVHIAPRFLNGQTVAAKDQ 913 FNPLQFQLLIDHITGHLGDENEQ+IAS IVRVVVAGNSVHI+PRF NGQ VA+KDQ Sbjct: 181 GSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQ 240 Query: 914 PRIAEPIKELDIMLTQLVASLPVDIMPGCNDPANFSLPQQPLHRCLFSGASTYNTFSSCP 1093 RIAEPIKELDIMLTQLVASLPVD+MPG NDPANFSLPQQPLHRCLF+GA+TYNTFSSC Sbjct: 241 SRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCS 300 Query: 1094 NPHQFDLDNVKCIGTSGQNIDDLYRYSDAKDRLEFMERTLKWRHLAPTAPNSLGCYPYTD 1273 NPHQF+LD+V+ IGTSGQNIDDLY+YSDAKD+LEF+ERTL+WRHLAPTAPNSLGCYPYTD Sbjct: 301 NPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTD 360 Query: 1274 KDPFLVETCPHVYFAGNQDKYETRLLKGTEKQQVRLISIPRFCESGIAVMLNLRNLECST 1453 KDPFLVE+CPHVYF GNQDKYET+LL+G EKQ+VRLI IPRFC+SG+AVMLNLRNLECST Sbjct: 361 KDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLECST 420 Query: 1454 LSFSTSFDA 1480 LSFSTSFDA Sbjct: 421 LSFSTSFDA 429
>AB037900:Os03g0128500 | Length = 429 Score = 766 bits (1979), Expect = 0.0 Identities = 368/429 (85%), Positives = 398/429 (92%) Frame = +2 Query: 194 MERKQADYSNLDERYTIQGERYQGQQYSHIYYTRLHHMRTLLHALVPSRKPHLPVTTVLG 373 MERKQA+YSNLDERY IQGE+YQGQQYSHIY+TRLHHMR LLHALVPS KPHLPVTTVLG Sbjct: 1 MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60 Query: 374 LEKGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVAL 553 LE+GKDC++VGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMH DD+LILEDESGRV L Sbjct: 61 LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL 120 Query: 554 AGAIPPAAYVTGVVVALHGKETSAGNFLVEDVMEAGLPPQSVLPCINEDKYXXXXXXXXX 733 AGAIPPAAYVTGVV+ALHGKETSAGNFLVED++EAG+PPQ LP INEDKY Sbjct: 121 AGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSINEDKYVVFVSGLSI 180 Query: 734 XXXTFNPLQFQLLIDHITGHLGDENEQTIASKIVRVVVAGNSVHIAPRFLNGQTVAAKDQ 913 FNPLQFQLLIDHITGHLGDENEQ+IAS IVRVVVAGNSVHI+PRF NGQ VA+KDQ Sbjct: 181 GSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQ 240 Query: 914 PRIAEPIKELDIMLTQLVASLPVDIMPGCNDPANFSLPQQPLHRCLFSGASTYNTFSSCP 1093 RIAEPIKELDIMLTQLVASLPVD+MPG NDPANFSLPQQPLHRCLF+GA+TYNTFSSC Sbjct: 241 SRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCS 300 Query: 1094 NPHQFDLDNVKCIGTSGQNIDDLYRYSDAKDRLEFMERTLKWRHLAPTAPNSLGCYPYTD 1273 NPHQF+LD+V+ IGTSGQNIDDLY+YSDAKD+LEF+ERTL+WRHLAPTAPNSLGCYPYTD Sbjct: 301 NPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTD 360 Query: 1274 KDPFLVETCPHVYFAGNQDKYETRLLKGTEKQQVRLISIPRFCESGIAVMLNLRNLECST 1453 KDPFLVE+CPHVYF GNQDKYET+LL+G EKQ+VRLI IPRFC+SG+AVMLNLRNLECST Sbjct: 361 KDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLECST 420 Query: 1454 LSFSTSFDA 1480 LSFSTSFDA Sbjct: 421 LSFSTSFDA 429
>AK119943: | Length = 278 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/73 (28%), Positives = 33/73 (45%) Frame = +2 Query: 446 DEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVALAGAIPPAAYVTGVVVALHGKETSA 625 D++ +E PL+ H F+H + + E GR L G I A T + ++ +A Sbjct: 91 DDFVEESKTRPLIVVHGFIHDVSSFLDEHPGGRHLLTGKIGKDA-TTAFLGGVYDHSNAA 149 Query: 626 GNFLVEDVMEAGL 664 N L VM G+ Sbjct: 150 HNLL--SVMRVGV 160
>Os10g0151500:Os10g0151500 | Length = 732 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +2 Query: 335 SRKPHLPVTTVLGLEKGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFM-HSD 511 S+K LP LG+ G ++V L+ M L+ ++EY K+ L K N M S Sbjct: 355 SQKFPLPAQIALGISLGFSFLIVAALFTLMMLQKRKINEYFKKNGGSILQKVDNIMIFSK 414 Query: 512 DNL 520 D+L Sbjct: 415 DDL 417
>AK110008: | Length = 600 Score = 30.0 bits (66), Expect = 5.4 Identities = 20/81 (24%), Positives = 37/81 (45%) Frame = +2 Query: 908 DQPRIAEPIKELDIMLTQLVASLPVDIMPGCNDPANFSLPQQPLHRCLFSGASTYNTFSS 1087 D + + + L+ M+ + ASL VD+ N PA+ +L + + +S +S+ +T Sbjct: 75 DASQTNDRLDRLEAMMGTIAASLGVDLPGAKNSPASATLTPGGVAQRKYSSSSSLSTNPG 134 Query: 1088 CPNPHQFDLDNVKCIGTSGQN 1150 N L + +G S N Sbjct: 135 SANASTSKLSTLAELGASEAN 155
>AK059168:Os03g0844600 | Length = 367 Score = 30.0 bits (66), Expect = 5.4 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Frame = +2 Query: 503 HSDDNLILEDESGRVALAGAIPP-----AAYVT-GVVVALHGKETSAGNFLVEDVMEAGL 664 +SD L+++ + R+AL G +PP AA T GV A+ G F + + + Sbjct: 69 YSDGRLVVDFLADRLALPGFLPPYLSPAAANATHGVNFAVAGATAIEHEFFARNNLSVDI 128 Query: 665 PPQSVL 682 PQS++ Sbjct: 129 TPQSIM 134
>AK105531:Os06g0704500 | Length = 409 Score = 29.6 bits (65), Expect = 7.0 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3 Query: 263 PGTSPPGSCTSRPGCCSPPASSPWRP 186 P T+PPG PG S P SS W P Sbjct: 333 PTTTPPGHHAPVPGTPSSPPSSSWSP 358
>AK069762:Os03g0269100 | Length = 308 Score = 29.3 bits (64), Expect = 9.2 Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 32/175 (18%) Frame = +2 Query: 218 SNLDERYTIQGERYQGQQYSHIYYTRL---HHMRTLLHALVPSRKPHLPVTTVLGLEKGK 388 +N+ ++ Q Y YS I T L +H+ L H L+ S V + G Sbjct: 140 NNVGTNFSKQTTEYSADDYSFIMATNLESAYHLCQLAHPLLKSSGSGSVV--FISSVSGV 197 Query: 389 DCVLVGTLYKHMK-----LKPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVAL 553 V G++Y K L ++ E++K+ V P S ++EDE R Sbjct: 198 VAVSSGSVYAMTKGAMNQLAKNLACEWAKDNIRTNSVAPWYMKTS----LVEDELARKDF 253 Query: 554 AGAI------------------------PPAAYVTGVVVALHGKETSAGNFLVED 646 A ++ P A+Y+TG +++ G T G + +D Sbjct: 254 ADSVVRRTALKRVGEPEEVSSLVAFLCMPGASYITGQTISVDGGMTINGLYPTQD 308
>AK058655:Os03g0269100 | Length = 269 Score = 29.3 bits (64), Expect = 9.2 Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 32/175 (18%) Frame = +2 Query: 218 SNLDERYTIQGERYQGQQYSHIYYTRL---HHMRTLLHALVPSRKPHLPVTTVLGLEKGK 388 +N+ ++ Q Y YS I T L +H+ L H L+ S V + G Sbjct: 101 NNVGTNFSKQTTEYSADDYSFIMATNLESAYHLCQLAHPLLKSSGSGSVV--FISSVSGV 158 Query: 389 DCVLVGTLYKHMK-----LKPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVAL 553 V G++Y K L ++ E++K+ V P S ++EDE R Sbjct: 159 VAVSSGSVYAMTKGAMNQLAKNLACEWAKDNIRTNSVAPWYMKTS----LVEDELARKDF 214 Query: 554 AGAI------------------------PPAAYVTGVVVALHGKETSAGNFLVED 646 A ++ P A+Y+TG +++ G T G + +D Sbjct: 215 ADSVVRRTALKRVGEPEEVSSLVAFLCMPGASYITGQTISVDGGMTINGLYPTQD 269 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,303,466 Number of extensions: 1125613 Number of successful extensions: 3051 Number of sequences better than 10.0: 9 Number of HSP's gapped: 3049 Number of HSP's successfully gapped: 9 Length of query: 581 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 475 Effective length of database: 11,155,509 Effective search space: 5298866775 Effective search space used: 5298866775 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
