ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93o17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121220:Os05g0314100 201 4e-52
2Os01g0967000:Os01g0967000 147 6e-36
3AK105062:Os05g0314100 98 4e-21
4AK099337:Os01g0866700 51 6e-07
5AK060459:Os01g0866700 51 6e-07
6AK110529: 41 6e-04
7AK063621:Os02g0126700 31 0.78
8AK059190:Os05g0389300 31 0.78
9Os01g0783600:Os01g0783600 30 1.0
10AK099454:Os04g0445800 29 2.9
11AK059440:Os08g0151400 28 5.0
12Os01g0556400:Os01g0556400 27 8.6

>AK121220:Os05g0314100 |
          Length = 140
 Score =  201 bits (510), Expect = 4e-52
 Identities = 101/107 (94%), Positives = 103/107 (96%)
 Frame = +1

Query: 136 MAEVAPVDQGKKEEEEFSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL 315
           MAE A   QGKKEEEEFSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL
Sbjct: 36  MAEEAT--QGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL 93

Query: 316 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 456
           ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 94  ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 140



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>Os01g0967000:Os01g0967000 |
          Length = 456

 Score =  147 bits (371), Expect = 6e-36
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +1

Query: 217 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDR 396
           S   + +VLINC+NNKKLLGRVRAFD HCNMVLENVREMWTEVPKTGKGKKKALPVNKDR
Sbjct: 377 SCLGDIKVLINCQNNKKLLGRVRAFDSHCNMVLENVREMWTEVPKTGKGKKKALPVNKDR 436

Query: 397 FISKMFLRGDSVIIVLRNPK 456
           FISKMFLRGDSVIIVL+NPK
Sbjct: 437 FISKMFLRGDSVIIVLKNPK 456



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>AK105062:Os05g0314100 |
          Length = 47

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +1

Query: 316 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 456
           ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 1   ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 47



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>AK099337:Os01g0866700 |
          Length = 104

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 30/90 (33%), Positives = 55/90 (61%)
 Frame = +1

Query: 172 EEEEFSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPK 351
           EEE     PL ++ LS+  + ++ +  R++++L G++ A+D+H NM+L +V E+ T V  
Sbjct: 11  EEEIAVKEPLDLIRLSL--DERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 68

Query: 352 TGKGKKKALPVNKDRFISKMFLRGDSVIIV 441
             +  ++ +   K R I  +F+RGD VI+V
Sbjct: 69  DDETYEEIVRTTK-RTIPFLFVRGDGVILV 97



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>AK060459:Os01g0866700 |
          Length = 104

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 30/90 (33%), Positives = 55/90 (61%)
 Frame = +1

Query: 172 EEEEFSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPK 351
           EEE     PL ++ LS+  + ++ +  R++++L G++ A+D+H NM+L +V E+ T V  
Sbjct: 11  EEEIAVKEPLDLIRLSL--DERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 68

Query: 352 TGKGKKKALPVNKDRFISKMFLRGDSVIIV 441
             +  ++ +   K R I  +F+RGD VI+V
Sbjct: 69  DDETYEEIVRTTK-RTIPFLFVRGDGVILV 97



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>AK110529: |
          Length = 264

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 21/69 (30%), Positives = 37/69 (53%)
 Frame = +1

Query: 229 NTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISK 408
           N ++ +   + +++ GR  A+DRH N+VL +  E     PK GK  ++     + R +  
Sbjct: 14  NYRMRVTLTDGRQICGRFMAYDRHMNLVLGDSEEFRKLPPKKGKSDEER---EERRVLGM 70

Query: 409 MFLRGDSVI 435
           + LRGD +I
Sbjct: 71  LLLRGDEII 79



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>AK063621:Os02g0126700 |
          Length = 88

 Score = 30.8 bits (68), Expect = 0.78
 Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = +1

Query: 178 EEFSTGPLSILM--LSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPK 351
           +   T P++++   L  K   Q+ +  + + ++ GR+  FD + N+VL+   E+      
Sbjct: 7   QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEI-----N 61

Query: 352 TGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 456
             K  +K+L         ++ L+GD++ +++   K
Sbjct: 62  IKKDTRKSL--------GRILLKGDNITLMMNTGK 88



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>AK059190:Os05g0389300 |
          Length = 89

 Score = 30.8 bits (68), Expect = 0.78
 Identities = 19/71 (26%), Positives = 42/71 (59%)
 Frame = +1

Query: 232 TQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKM 411
           +++ +  + +K+L+G +  FD + NMVLE+V    TE   T +G++    + K   + ++
Sbjct: 21  SKIWVIMKGDKELVGTLCGFDVYVNMVLEDV----TEYEYTAEGRR----ITK---LDQI 69

Query: 412 FLRGDSVIIVL 444
            L G+++ I++
Sbjct: 70  LLNGNNIAILV 80



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>Os01g0783600:Os01g0783600 |
          Length = 205

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 233 VLFLTLSMRME-RGPVLNSSSSFFP*STGATSAMDATAG*RGKGRRP 96
           VL LT + R+  R PVL SSS F   ST  + A  ATA  RG G  P
Sbjct: 7   VLGLTAARRLRSRAPVLVSSSPFLEASTSTSDATAATAT-RGSGLGP 52



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>AK099454:Os04g0445800 |
          Length = 129

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 6/44 (13%)
 Frame = +1

Query: 235 QVLINCRNNKKLLGRVRAFDRHCNMVLEN------VREMWTEVP 348
           ++++  R+ +KLLG + +FD+  N+VL+       V E++ +VP
Sbjct: 23  KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVP 66



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>AK059440:Os08g0151400 |
          Length = 64

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 16/74 (21%), Positives = 38/74 (51%)
 Frame = +1

Query: 235 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 414
           Q+ +  + + ++ GR+  FD + N+VL++  E+        K  +K+L         ++ 
Sbjct: 4   QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI-----NVKKDTRKSL--------GRIL 50

Query: 415 LRGDSVIIVLRNPK 456
           L+GD++ +++   K
Sbjct: 51  LKGDNITLMMNTGK 64



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>Os01g0556400:Os01g0556400 |
          Length = 429

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +1

Query: 160 QGKKEEEEFSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWT 339
           +GKK+EE+ S G  S     ++   QV  + R+  ++LG     ++ C   +E+VR+ + 
Sbjct: 147 KGKKKEEDESAGERSYTSEQLEVVRQVKKHTRDYYQILG----LEKDC--TVEDVRKAYR 200

Query: 340 EVPKTGKGKKKALPVNKDRF--ISKMF 414
           ++       K   P  +D F  +SK F
Sbjct: 201 KLSLKVHPDKNKAPGAEDAFKAVSKAF 227


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,594,051
Number of extensions: 322505
Number of successful extensions: 950
Number of sequences better than 10.0: 12
Number of HSP's gapped: 947
Number of HSP's successfully gapped: 12
Length of query: 209
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 113
Effective length of database: 11,555,919
Effective search space: 1305818847
Effective search space used: 1305818847
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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