Clone Name | FLbaf93o17 |
---|---|
Clone Library Name | barley_pub |
>emb|CT828308.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA011K13, full insert sequence Length = 721 Score = 381 bits (192), Expect = e-102 Identities = 276/304 (90%) Strand = Plus / Plus Query: 159 tcaggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctcag 218 |||||||||||||||||||||||| ||||| |||||||| || ||| | || ||| | || Sbjct: 136 tcaggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgag 195 Query: 219 cgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcg 278 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 196 cgtgaagaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcg 255 Query: 279 cgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||| Sbjct: 256 tgtgagggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggac 315 Query: 339 tgaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggtt 398 |||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 316 tgaggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggtt 375 Query: 399 cataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatg 458 ||| |||||||||||||| || ||||||||||||||||| || ||||||||||||||||| Sbjct: 376 cattagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatg 435 Query: 459 agtt 462 |||| Sbjct: 436 agtt 439
>dbj|AK241054.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065062N18, full insert sequence Length = 651 Score = 381 bits (192), Expect = e-102 Identities = 276/304 (90%) Strand = Plus / Plus Query: 159 tcaggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctcag 218 |||||||||||||||||||||||| ||||| |||||||| || ||| | || ||| | || Sbjct: 136 tcaggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgag 195 Query: 219 cgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcg 278 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 196 cgtgaagaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcg 255 Query: 279 cgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||| Sbjct: 256 tgtgagggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggac 315 Query: 339 tgaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggtt 398 |||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 316 tgaggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggtt 375 Query: 399 cataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatg 458 ||| |||||||||||||| || ||||||||||||||||| || ||||||||||||||||| Sbjct: 376 cattagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatg 435 Query: 459 agtt 462 |||| Sbjct: 436 agtt 439
>ref|NM_001061703.1| Oryza sativa (japonica cultivar-group) Os05g0314100 (Os05g0314100) mRNA, partial cds Length = 693 Score = 381 bits (192), Expect = e-102 Identities = 276/304 (90%) Strand = Plus / Plus Query: 159 tcaggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctcag 218 |||||||||||||||||||||||| ||||| |||||||| || ||| | || ||| | || Sbjct: 136 tcaggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgag 195 Query: 219 cgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcg 278 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 196 cgtgaagaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcg 255 Query: 279 cgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||| Sbjct: 256 tgtgagggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggac 315 Query: 339 tgaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggtt 398 |||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 316 tgaggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggtt 375 Query: 399 cataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatg 458 ||| |||||||||||||| || ||||||||||||||||| || ||||||||||||||||| Sbjct: 376 cattagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatg 435 Query: 459 agtt 462 |||| Sbjct: 436 agtt 439
>dbj|AK121220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H02, full insert sequence Length = 694 Score = 381 bits (192), Expect = e-102 Identities = 276/304 (90%) Strand = Plus / Plus Query: 159 tcaggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctcag 218 |||||||||||||||||||||||| ||||| |||||||| || ||| | || ||| | || Sbjct: 137 tcaggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgag 196 Query: 219 cgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcg 278 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 197 cgtgaagaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcg 256 Query: 279 cgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||| Sbjct: 257 tgtgagggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggac 316 Query: 339 tgaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggtt 398 |||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 317 tgaggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggtt 376 Query: 399 cataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatg 458 ||| |||||||||||||| || ||||||||||||||||| || ||||||||||||||||| Sbjct: 377 cattagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatg 436 Query: 459 agtt 462 |||| Sbjct: 437 agtt 440
>gb|DQ245570.1| Zea mays clone 17588 mRNA sequence Length = 646 Score = 367 bits (185), Expect = 3e-98 Identities = 266/293 (90%) Strand = Plus / Plus Query: 169 aaggaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaac 228 |||||||| |||||||||||||| || || ||||| | |||||| | ||||||||||| Sbjct: 98 aaggaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaat 157 Query: 229 aacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcg 288 || |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 158 aatacccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagcc 217 Query: 289 tttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttcca 348 || || || ||||||||||||||||| |||||||| | ||||||||||| ||||| || Sbjct: 218 ttcgatcggcactgcaacatggttcttgagaacgttcgtgagatgtggaccgaggtaccg 277 Query: 349 aagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaag 408 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 278 aagaccggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaag 337 Query: 409 atgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgagt 461 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 atgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgagt 390
>ref|NM_001052041.1| Oryza sativa (japonica cultivar-group) Os01g0967000 (Os01g0967000) mRNA, complete cds Length = 1371 Score = 246 bits (124), Expect = 8e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 236 aggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgacc 295 ||||||||||||| |||| ||||||||||||||| || ||||| |||||||| ||||| Sbjct: 1148 aggtgcttatcaattgccagaacaacaagaagttactaggtcgtgtgagggcatttgata 1207 Query: 296 gtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaagactg 355 | || |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 1208 gccattgcaacatggttcttgagaatgtcagggagatgtggaccgaggtaccaaagactg 1267 Query: 356 gtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatgttcc 415 ||||||||||||||||||| || || |||||||||||||||||||| ||||||||||||| Sbjct: 1268 gtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcatcagcaagatgttcc 1327 Query: 416 tccgcggggattcggtcatcatcgtcctcaggaacccgaaatga 459 | || ||||| ||||||||||| || |||| |||||||||||| Sbjct: 1328 tacgtggggactcggtcatcattgtgctcaaaaacccgaaatga 1371
>ref|NM_130332.2| Arabidopsis thaliana unknown protein (AT2G47640) mRNA, complete cds Length = 624 Score = 204 bits (103), Expect = 3e-49 Identities = 253/303 (83%) Strand = Plus / Plus Query: 158 atcaggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctca 217 ||||||| |||| ||||| ||||| |||| ||| ||||| ||||| | || ||| | | Sbjct: 155 atcagggcaagactgaggaagaggaattcaacaccgggccactctctgttcttatgatga 214 Query: 218 gcgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtc 277 |||||||||| ||||| ||||| | ||||| ||||||||||||| ||| | ||||| | Sbjct: 215 gcgtcaagaataacactcaggttttaatcaattgccggaacaacaggaaacttcttgggc 274 Query: 278 gcgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtgga 337 | ||||||||||||||| | ||||||||||||||||| || || ||||| |||||||||| Sbjct: 275 gagtgagggcgtttgacagacactgcaacatggttcttgaaaatgtcagagagatgtgga 334 Query: 338 ctgaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggt 397 |||||||||| || ||||| |||||||||||||| || || |||||||||| || ||| Sbjct: 335 ctgaggttccgaaaactgggaaaggcaagaagaaagcacttccggtgaacagagatcggt 394 Query: 398 tcataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaat 457 |||||||||||||||| || || || || |||||||| |||||||||||||| || |||| Sbjct: 395 tcataagcaagatgtttctacgtggagactcggtcattatcgtcctcaggaatccaaaat 454 Query: 458 gag 460 ||| Sbjct: 455 gag 457
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence Length = 619 Score = 204 bits (103), Expect = 3e-49 Identities = 253/303 (83%) Strand = Plus / Plus Query: 158 atcaggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctca 217 ||||||| |||| ||||| ||||| |||| ||| ||||| ||||| | || ||| | | Sbjct: 150 atcagggcaagactgaggaagaggaattcaacaccgggccactctctgttcttatgatga 209 Query: 218 gcgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtc 277 |||||||||| ||||| ||||| | ||||| ||||||||||||| ||| | ||||| | Sbjct: 210 gcgtcaagaataacactcaggttttaatcaattgccggaacaacaggaaacttcttgggc 269 Query: 278 gcgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtgga 337 | ||||||||||||||| | ||||||||||||||||| || || ||||| |||||||||| Sbjct: 270 gagtgagggcgtttgacagacactgcaacatggttcttgaaaatgtcagagagatgtgga 329 Query: 338 ctgaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggt 397 |||||||||| || ||||| |||||||||||||| || || |||||||||| || ||| Sbjct: 330 ctgaggttccgaaaactgggaaaggcaagaagaaagcacttccggtgaacagagatcggt 389 Query: 398 tcataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaat 457 |||||||||||||||| || || || || |||||||| |||||||||||||| || |||| Sbjct: 390 tcataagcaagatgtttctacgtggagactcggtcattatcgtcctcaggaatccaaaat 449 Query: 458 gag 460 ||| Sbjct: 450 gag 452
>dbj|AK105062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B09, full insert sequence Length = 360 Score = 204 bits (103), Expect = 3e-49 Identities = 136/147 (92%) Strand = Plus / Plus Query: 316 gagaacgtcagggagatgtggactgaggttccaaagactggtaaaggcaagaagaaggcc 375 ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2 gagaatgttagggagatgtggactgaggtaccaaagactggtaaaggcaagaagaaggct 61 Query: 376 ctcccggtgaacaaggacaggttcataagcaagatgttcctccgcggggattcggtcatc 435 || || |||||||||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 62 cttccagtgaacaaggacaggttcattagcaagatgttcctacgtggggattcggtcatc 121 Query: 436 atcgtcctcaggaacccgaaatgagtt 462 || || ||||||||||||||||||||| Sbjct: 122 attgtgctcaggaacccgaaatgagtt 148
>dbj|AK227792.1| Arabidopsis thaliana mRNA for putative small nuclear ribonucleoprotein D2, complete cds, clone: RAFL14-35-O15 Length = 589 Score = 200 bits (101), Expect = 4e-48 Identities = 242/289 (83%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 ||||| ||||| |||| ||| ||||| ||||| | || ||| | ||||||||||| ||| Sbjct: 132 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 191 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| | ||||| ||||||||||||| ||| | ||||| || |||||||||||| Sbjct: 192 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 251 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | ||||||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 252 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 311 Query: 352 actggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatg 411 ||||| |||||||||||||| || || |||||||||| || ||||||||||||||||| Sbjct: 312 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 371 Query: 412 ttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 || || || || || |||||||| |||||||||||||| || ||||||| Sbjct: 372 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatgag 420
>ref|NM_180146.3| Arabidopsis thaliana unknown protein (AT2G47640) mRNA, complete cds Length = 586 Score = 200 bits (101), Expect = 4e-48 Identities = 242/289 (83%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 ||||| ||||| |||| ||| ||||| ||||| | || ||| | ||||||||||| ||| Sbjct: 131 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 190 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| | ||||| ||||||||||||| ||| | ||||| || |||||||||||| Sbjct: 191 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 250 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | ||||||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 251 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 310 Query: 352 actggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatg 411 ||||| |||||||||||||| || || |||||||||| || ||||||||||||||||| Sbjct: 311 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 370 Query: 412 ttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 || || || || || |||||||| |||||||||||||| || ||||||| Sbjct: 371 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatgag 419
>ref|NM_201981.2| Arabidopsis thaliana unknown protein (AT2G47640) mRNA, complete cds Length = 594 Score = 200 bits (101), Expect = 4e-48 Identities = 242/289 (83%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 ||||| ||||| |||| ||| ||||| ||||| | || ||| | ||||||||||| ||| Sbjct: 139 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 198 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| | ||||| ||||||||||||| ||| | ||||| || |||||||||||| Sbjct: 199 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 258 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | ||||||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 259 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 318 Query: 352 actggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatg 411 ||||| |||||||||||||| || || |||||||||| || ||||||||||||||||| Sbjct: 319 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 378 Query: 412 ttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 || || || || || |||||||| |||||||||||||| || ||||||| Sbjct: 379 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatgag 427
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 586 Score = 200 bits (101), Expect = 4e-48 Identities = 242/289 (83%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 ||||| ||||| |||| ||| ||||| ||||| | || ||| | ||||||||||| ||| Sbjct: 139 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 198 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| | ||||| ||||||||||||| ||| | ||||| || |||||||||||| Sbjct: 199 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 258 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | ||||||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 259 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 318 Query: 352 actggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatg 411 ||||| |||||||||||||| || || |||||||||| || ||||||||||||||||| Sbjct: 319 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 378 Query: 412 ttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 || || || || || |||||||| |||||||||||||| || ||||||| Sbjct: 379 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatgag 427
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds Length = 327 Score = 198 bits (100), Expect = 2e-47 Identities = 241/288 (83%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 ||||| ||||| |||| ||| ||||| ||||| | || ||| | ||||||||||| ||| Sbjct: 40 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 99 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| | ||||| ||||||||||||| ||| | ||||| || |||||||||||| Sbjct: 100 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 159 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | ||||||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 160 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 219 Query: 352 actggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatg 411 ||||| |||||||||||||| || || |||||||||| || ||||||||||||||||| Sbjct: 220 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 279 Query: 412 ttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatga 459 || || || || || |||||||| |||||||||||||| || |||||| Sbjct: 280 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 327
>gb|DQ245030.1| Zea mays clone 12355 mRNA sequence Length = 838 Score = 178 bits (90), Expect = 2e-41 Identities = 195/230 (84%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| || || Sbjct: 206 aagaacaacacccaggttctcatcaattgccgcaacaacaagaagctgcttggccgggtt 265 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | || ||||| || ||||| |||||||| ||||||||||| ||||||||||||| ||| Sbjct: 266 cgtgcttttgatcgccactgtaacatggtgctcgagaacgtgcgggagatgtggacagag 325 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 || || |||||||| || ||||| |||||||| || || ||||||||||| || ||||| Sbjct: 326 gtccccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatc 385 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 ||||||||||||||| | || || |||||||||||||| || |||||||| Sbjct: 386 agcaagatgttcctcaggggcgactcggtcatcatcgtgctgaggaaccc 435
>gb|AY103713.1| Zea mays PCO076540 mRNA sequence Length = 785 Score = 178 bits (90), Expect = 2e-41 Identities = 195/230 (84%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| || || Sbjct: 225 aagaacaacacccaggttctcatcaattgccgcaacaacaagaagctgcttggccgggtt 284 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | || ||||| || ||||| |||||||| ||||||||||| ||||||||||||| ||| Sbjct: 285 cgtgcttttgatcgccactgtaacatggtgctcgagaacgtgcgggagatgtggacagag 344 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 || || |||||||| || ||||| |||||||| || || ||||||||||| || ||||| Sbjct: 345 gtccccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatc 404 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 ||||||||||||||| | || || |||||||||||||| || |||||||| Sbjct: 405 agcaagatgttcctcaggggcgactcggtcatcatcgtgctgaggaaccc 454
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 170 bits (86), Expect = 4e-39 Identities = 113/122 (92%) Strand = Plus / Minus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 |||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 45390 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 45331 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 | |||||||||||||| || ||||||||||||||||| || ||||||||||||||||||| Sbjct: 45330 ttagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatgag 45271 Query: 461 tt 462 || Sbjct: 45270 tt 45269 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 aggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgacc 295 ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 45581 aggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgagggcatttgatc 45522 Query: 296 gtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 | || |||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 45521 gccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 45473 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctcagc 219 ||||||||||||||||||||||| ||||| |||||||| || ||| | || ||| | ||| Sbjct: 47269 caggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagc 47210 Query: 220 gtcaagaacaacacccaggt 239 || ||||||||||||||||| Sbjct: 47209 gtgaagaacaacacccaggt 47190
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 170 bits (86), Expect = 4e-39 Identities = 113/122 (92%) Strand = Plus / Minus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 |||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 14316604 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 14316545 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 | |||||||||||||| || ||||||||||||||||| || ||||||||||||||||||| Sbjct: 14316544 ttagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatgag 14316485 Query: 461 tt 462 || Sbjct: 14316484 tt 14316483 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 aggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgacc 295 ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 14316795 aggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgagggcatttgatc 14316736 Query: 296 gtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 | || |||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 14316735 gccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 14316687 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggagttcagcacggggcccctctccatcctcatgctcagc 219 ||||||||||||||||||||||| ||||| |||||||| || ||| | || ||| | ||| Sbjct: 14318483 caggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagc 14318424 Query: 220 gtcaagaacaacacccaggt 239 || ||||||||||||||||| Sbjct: 14318423 gtgaagaacaacacccaggt 14318404 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||| ||||||||||||||| Sbjct: 11775280 caggggaaaaaggaggaggaggag 11775303 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 ||||||||| |||||||||||||| Sbjct: 14019891 caggggaaggaggaggaggaggag 14019914
>dbj|AK240238.1| Sus scrofa mRNA, clone:UTR010044A05, expressed in uterus Length = 530 Score = 155 bits (78), Expect = 2e-34 Identities = 195/234 (83%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| ||||||||||| |||||||||||| | || || ||| Sbjct: 182 gtcaagaacaacacccaagtgctcatcaactgccgcaacaacaagaagctcctgggccgc 241 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 242 gtgaaggcctttgacaggcactgcaacatggtgctggagaacgtgaaggagatgtggact 301 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||||||| | | | Sbjct: 302 gaggtccccaagagcggcaagggcaagaagaagtccaagcccgtcaacaaggaccgctac 361 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 362 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 415
>dbj|AK231353.1| Sus scrofa mRNA, clone:ITT010043H12, expressed in intestine Length = 537 Score = 155 bits (78), Expect = 2e-34 Identities = 195/234 (83%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| ||||||||||| |||||||||||| | || || ||| Sbjct: 182 gtcaagaacaacacccaagtgctcatcaactgccgcaacaacaagaagctcctgggccgc 241 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 242 gtgaaggcctttgacaggcactgcaacatggtgctggagaacgtgaaggagatgtggact 301 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||||||| | | | Sbjct: 302 gaggtccccaagagcggcaagggcaagaagaagtccaagcccgtcaacaaggaccgctac 361 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 362 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 415
>gb|DQ658330.1| Emiliania huxleyi clone Plate2_C01_compl;77-2-19-E12 putative small nuclear ribonucleoprotein d2, complete cds Length = 738 Score = 153 bits (77), Expect = 9e-34 Identities = 152/177 (85%) Strand = Plus / Plus Query: 171 ggaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaa 230 |||||||||||||||| ||| ||||| ||||| | |||| || ||||||||| ||| Sbjct: 78 ggaggaggaggagttccacaccgggccgctctcggtgctcacgcagagcgtcaagtccaa 137 Query: 231 cacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtt 290 ||| |||||||| ||||||||||| |||||||||||| |||| || ||||| | ||| || Sbjct: 138 cacgcaggtgctcatcaactgccgcaacaacaagaagctgctcggccgcgtcaaggcctt 197 Query: 291 tgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttcc 347 |||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 198 tgaccggcactgcaacatggtgctcgagaacgtcaaggagatgtggacggaggttcc 254
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 153 bits (77), Expect = 9e-34 Identities = 152/177 (85%) Strand = Plus / Minus Query: 171 ggaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaa 230 |||||||||||||||| ||| ||||| ||||| | |||| || ||||||||| ||| Sbjct: 3276 ggaggaggaggagttccacaccgggccgctctcggtgctcacgcagagcgtcaagtccaa 3217 Query: 231 cacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtt 290 ||| |||||||| ||||||||||| |||||||||||| |||| || ||||| | ||| || Sbjct: 3216 cacgcaggtgctcatcaactgccgcaacaacaagaagctgctcggccgcgtcaaggcctt 3157 Query: 291 tgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttcc 347 |||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 3156 tgaccggcactgcaacatggtgctcgagaacgtcaaggagatgtggacggaggttcc 3100
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 147 bits (74), Expect = 6e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 |||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 42631332 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 42631273 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 | |||||||||||||| || ||||| ||||||||||| || |||| ||||||||||||| Sbjct: 42631272 tcagcaagatgttcctacgtggggactcggtcatcattgtgctcaaaaacccgaaatgag 42631213 Query: 461 tt 462 || Sbjct: 42631212 tt 42631211 Score = 113 bits (57), Expect = 8e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 aggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgacc 295 ||||||||||||| |||| ||||||||||||||| || ||||| |||||||| ||||| Sbjct: 42631529 aggtgcttatcaattgccagaacaacaagaagttactaggtcgtgtgagggcatttgata 42631470 Query: 296 gtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 | || |||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 42631469 gccattgcaacatggttcttgagaatgtcagggagatgtggaccgaggt 42631421 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 17183902 caggggaagaaggaggaggaggag 17183925 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggagg 181 ||||||||||||||||||||| Sbjct: 20388044 aggggaagaaggaggaggagg 20388064 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggagg 181 ||||||||||||||||||||| Sbjct: 40947549 aggggaagaaggaggaggagg 40947529 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 16640260 caggagaagaaggaggaggaggag 16640283 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 agaaggaggaggaggagttc 186 |||||||||||||||||||| Sbjct: 25297943 agaaggaggaggaggagttc 25297924 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 29791502 caggagaagaaggaggaggaggag 29791525
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 147 bits (74), Expect = 6e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 |||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 152215 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 152156 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 | |||||||||||||| || ||||| ||||||||||| || |||| ||||||||||||| Sbjct: 152155 tcagcaagatgttcctacgtggggactcggtcatcattgtgctcaaaaacccgaaatgag 152096 Query: 461 tt 462 || Sbjct: 152095 tt 152094 Score = 113 bits (57), Expect = 8e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 aggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgacc 295 ||||||||||||| |||| ||||||||||||||| || ||||| |||||||| ||||| Sbjct: 152412 aggtgcttatcaattgccagaacaacaagaagttactaggtcgtgtgagggcatttgata 152353 Query: 296 gtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 | || |||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 152352 gccattgcaacatggttcttgagaatgtcagggagatgtggaccgaggt 152304
>gb|AY610377.1| Sus scrofa clone reli1115b_h17.y1.abd, mRNA sequence Length = 415 Score = 141 bits (71), Expect = 3e-30 Identities = 195/235 (82%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| ||||||||||| |||||||||||| | || || ||| Sbjct: 157 gtcaagaacaacacccaagtgctcatcaactgccgcaacaacaagaagctcctgggccgc 216 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 217 gtgaaggcctttgacaggcactgcaacatggtgctggagaacgtgaaggagatgtggact 276 Query: 340 gaggttccaaagactggtaaag-gcaagaagaaggccctcccggtgaacaaggacaggtt 398 ||||| || |||| || || | ||||||||||| || || || ||||||||| | | Sbjct: 277 gaggtccccaagagcggcaaggtgcaagaagaagtccaagcccgtcaacaaggaccgcta 336 Query: 399 cataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 ||| |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 337 catctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 391
>ref|NM_001034476.1| Bos taurus similar to small nuclear ribonucleoprotein D2 (MGC128077), mRNA gb|BC102877.1| Bos taurus similar to small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:128077 IMAGE:7949710), complete cds Length = 596 Score = 133 bits (67), Expect = 8e-28 Identities = 229/283 (80%) Strand = Plus / Plus Query: 171 ggaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaa 230 ||||||||||||||| | ||||||||| |||||| | |||| || ||||| ||||| Sbjct: 143 ggaggaggaggagtttaacacggggccactctccgtgctcacgcagtcagtcaaaaacaa 202 Query: 231 cacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtt 290 ||| || ||||| ||||||||||| |||||||||||| | || || ||||||| ||| || Sbjct: 203 cactcaagtgctcatcaactgccgtaacaacaagaagctcctgggccgcgtgaaggcctt 262 Query: 291 tgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaa 350 |||| | |||||||||||||| || |||||||| | ||| |||||||| ||||| || || Sbjct: 263 tgacaggcactgcaacatggtgctggagaacgtgaaggaaatgtggacggaggtccccaa 322 Query: 351 gactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagat 410 || || || |||||||||||| || || || ||||||||| | | ||| |||||| Sbjct: 323 gagcggcaagggcaagaagaagtccaagcccgtcaacaaggaccgctacatctccaagat 382 Query: 411 gttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 |||||| |||||||| || |||||| | ||||| ||||||||| Sbjct: 383 gttcctgcgcggggactctgtcatcgtggtcctgaggaacccg 425
>ref|NM_116149.2| Arabidopsis thaliana unknown protein (AT3G62840) mRNA, complete cds Length = 1063 Score = 115 bits (58), Expect = 2e-22 Identities = 187/230 (81%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||| ||||| |||||| | ||||| ||||| ||||||| ||| | ||||| || || Sbjct: 211 aagaataacactcaggtgttgatcaattgccgtaacaacaggaaactccttggccgagtt 270 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 ||||| |||||| | ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 271 agggcttttgacaggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgag 330 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 ||||| || || || ||||| |||||||| || || || || |||| || | ||||| Sbjct: 331 gttccgaaaaccggaaaaggaaagaagaaagctcttcctgttaacagagatcgattcatc 390 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 |||||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 391 agcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaaccc 440
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence Length = 646 Score = 115 bits (58), Expect = 2e-22 Identities = 187/230 (81%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||| ||||| |||||| | ||||| ||||| ||||||| ||| | ||||| || || Sbjct: 214 aagaataacactcaggtgttgatcaattgccgtaacaacaggaaactccttggccgagtt 273 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 ||||| |||||| | ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 274 agggcttttgacaggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgag 333 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 ||||| || || || ||||| |||||||| || || || || |||| || | ||||| Sbjct: 334 gttccgaaaaccggaaaaggaaagaagaaagctcttcctgttaacagagatcgattcatc 393 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 |||||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 394 agcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaaccc 443
>dbj|AK045968.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230328B02 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 462 Score = 113 bits (57), Expect = 8e-22 Identities = 213/265 (80%) Strand = Plus / Plus Query: 171 ggaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaa 230 |||||||||||| |||| ||| || |||||||| || |||| || ||||||||||| Sbjct: 87 ggaggaggaggaattcaacacaggtcccctctcaatgctcacgcagtcggtcaagaacaa 146 Query: 231 cacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtt 290 ||| || ||||| || ||||| || |||||||||||| |||| || || |||| ||| || Sbjct: 147 cacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgggtgaaggcctt 206 Query: 291 tgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaa 350 |||| | |||||||||||||| || || || || | ||||||||||||||||||||| || Sbjct: 207 tgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggactgaggttcccaa 266 Query: 351 gactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagat 410 || || || ||||||||||| || || || ||||||||| | | ||| |||||| Sbjct: 267 gagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctacatctccaagat 326 Query: 411 gttcctccgcggggattcggtcatc 435 |||||| |||||||| ||||||||| Sbjct: 327 gttcctgcgcggggactcggtcatc 351
>gb|BC116860.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:151237 IMAGE:40126179), complete cds Length = 459 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 144 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 203 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 204 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 263 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 |||||||| |||| || || ||||||||||| || || || ||||||||| | | | Sbjct: 264 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 323 Query: 400 ataagcaagatgttcctccgcggggattcggtcatc 435 || |||||||||||| |||||||| ||||||||| Sbjct: 324 atctccaagatgttcctgcgcggggactcggtcatc 359
>gb|BC116858.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:151235 IMAGE:40126177), complete cds Length = 459 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 144 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 203 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 204 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 263 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 |||||||| |||| || || ||||||||||| || || || ||||||||| | | | Sbjct: 264 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 323 Query: 400 ataagcaagatgttcctccgcggggattcggtcatc 435 || |||||||||||| |||||||| ||||||||| Sbjct: 324 atctccaagatgttcctgcgcggggactcggtcatc 359
>dbj|AK088105.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004E09 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 140 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 199 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 200 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 259 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 |||||||| |||| || || ||||||||||| || || || ||||||||| | | | Sbjct: 260 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 319 Query: 400 ataagcaagatgttcctccgcggggattcggtcatc 435 || |||||||||||| |||||||| ||||||||| Sbjct: 320 atctccaagatgttcctgcgcggggactcggtcatc 355
>dbj|AK007389.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810009A06 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 140 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 199 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 200 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 259 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 |||||||| |||| || || ||||||||||| || || || ||||||||| | | | Sbjct: 260 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 319 Query: 400 ataagcaagatgttcctccgcggggattcggtcatc 435 || |||||||||||| |||||||| ||||||||| Sbjct: 320 atctccaagatgttcctgcgcggggactcggtcatc 355
>gb|BC051208.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:62953 IMAGE:1510565), complete cds Length = 489 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 140 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 199 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 200 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 259 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 |||||||| |||| || || ||||||||||| || || || ||||||||| | | | Sbjct: 260 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 319 Query: 400 ataagcaagatgttcctccgcggggattcggtcatc 435 || |||||||||||| |||||||| ||||||||| Sbjct: 320 atctccaagatgttcctgcgcggggactcggtcatc 355
>ref|NM_026943.1| Mus musculus small nuclear ribonucleoprotein D2 (Snrpd2), mRNA gb|BC043014.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:57881 IMAGE:5683364), complete cds Length = 508 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 161 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 220 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 221 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 280 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 |||||||| |||| || || ||||||||||| || || || ||||||||| | | | Sbjct: 281 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 340 Query: 400 ataagcaagatgttcctccgcggggattcggtcatc 435 || |||||||||||| |||||||| ||||||||| Sbjct: 341 atctccaagatgttcctgcgcggggactcggtcatc 376
>ref|XM_001166252.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 4 (SNRPD2), mRNA Length = 706 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 361 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 420 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 421 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 480 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||| ||| | | | Sbjct: 481 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 540 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 541 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 594
>ref|XM_001166224.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 3 (SNRPD2), mRNA Length = 522 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 177 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 236 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 237 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 296 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||| ||| | | | Sbjct: 297 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 356 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 357 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 410
>ref|XM_001166194.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 2 (SNRPD2), mRNA Length = 521 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 176 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 235 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 236 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 295 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||| ||| | | | Sbjct: 296 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 355 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 356 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 409
>ref|XM_001166157.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 1 (SNRPD2), mRNA Length = 514 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 169 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 228 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 229 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 288 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||| ||| | | | Sbjct: 289 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 348 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 349 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 402
>ref|XM_512755.2| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 5 (SNRPD2), mRNA Length = 504 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 159 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 218 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 219 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 278 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||| ||| | | | Sbjct: 279 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 338 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 339 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 392
>gb|DQ894432.1| Homo sapiens clone FLH176224.01L; RZPDo839A12121D SNRPD2 mRNA, partial sequence Length = 357 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 106 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 166 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 225 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 226 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 285 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 286 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 339
>gb|DQ891246.1| Synthetic construct Homo sapiens clone FLH176228.01X; RZPDo839A12122D SNRPD2 mRNA, complete sequence Length = 357 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 106 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 166 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 225 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 226 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 285 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 286 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 339
>gb|BC051368.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 6, mRNA (cDNA clone IMAGE:3956684) Length = 1322 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Minus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 381 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 322 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 321 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 262 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 261 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 202 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 201 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 148
>gb|BC000486.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, mRNA (cDNA clone MGC:8353 IMAGE:2819767), complete cds Length = 492 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 132 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 191 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 192 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 251 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 252 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 311 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 312 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 365
>gb|BC001930.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, mRNA (cDNA clone MGC:3995 IMAGE:2819767), complete cds Length = 470 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 110 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 169 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 170 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 229 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 230 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 289 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 290 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 343
>ref|NM_177542.1| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 2, mRNA Length = 876 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 516 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 575 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 576 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 635 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 636 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 695 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 696 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 749
>ref|NM_004597.4| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 1, mRNA Length = 762 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 402 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 461 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 462 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 521 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 522 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 581 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 582 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 635
>gb|AY894074.1| Synthetic construct Homo sapiens clone FLH131151.01L small nuclear ribonucleoprotein D2 polypeptide (SNRPD2) mRNA, partial cds Length = 357 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 106 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 166 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 225 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 226 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 285 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 286 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 339
>gb|U15008.1|HSU15008 Human SnRNP core protein Sm D2 mRNA, complete cds Length = 479 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| | || || ||| Sbjct: 136 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 195 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 196 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 255 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| ||| || |||||||||||| || || || ||||| ||| | | | Sbjct: 256 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 315 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| || |||||| | ||||| |||||||| Sbjct: 316 atctccaagatgttcctgcgcggggactcagtcatcgtggtcctgcggaacccg 369
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 103 bits (52), Expect = 7e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 131902 gtcaagaacaacacacaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 131961 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 131962 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 132021 Query: 340 gaggttccaaagactggtaaaggcaagaagaa 371 |||||||| |||| || || ||||||||||| Sbjct: 132022 gaggttcccaagagcggcaagggcaagaagaa 132053
>gb|BT028873.1| Drosophila melanogaster SD20656 full insert cDNA Length = 3257 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Minus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 |||||||||||||||||||| ||||||||||| |||||||||||| |||| || | || Sbjct: 348 aagaacaacacccaggtgctcatcaactgccgcaacaacaagaagctgctgggcagggta 289 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || || || |||||||||||||| || || ||||| | |||||||||||| ||| Sbjct: 288 aaggccttcgatcggcactgcaacatggtactggaaaacgtgaaggagatgtggacggag 229 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 | || ||| ||||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 228 ctgccgcggaccggtaagggcaagaagaaggtgaagcccgtgaacaaggatcggttcata 169 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||||||||| || || ||||| |||||| | ||||| ||||| Sbjct: 168 tcgaagatgttcctgcgaggcgattctgtcatcctggtcctaaggaa 122
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Minus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 |||||||||||||||||||| ||||||||||| |||||||||||| |||| || | || Sbjct: 2171255 aagaacaacacccaggtgctcatcaactgccgcaacaacaagaagctgctgggcagggta 2171196 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || || || |||||||||||||| || || ||||| | |||||||||||| ||| Sbjct: 2171195 aaggccttcgatcggcactgcaacatggtactggaaaacgtgaaggagatgtggacggag 2171136 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 | || ||| ||||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 2171135 ctgccgcggaccggtaagggcaagaagaaggtgaagcccgtgaacaaggatcggttcata 2171076 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||||||||| || || ||||| |||||| | ||||| ||||| Sbjct: 2171075 tcgaagatgttcctgcgaggcgattctgtcatcctggtcctaaggaa 2171029
>ref|NM_141388.2| Drosophila melanogaster CG1249-RA (CG1249), mRNA Length = 765 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 |||||||||||||||||||| ||||||||||| |||||||||||| |||| || | || Sbjct: 229 aagaacaacacccaggtgctcatcaactgccgcaacaacaagaagctgctgggcagggta 288 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || || || |||||||||||||| || || ||||| | |||||||||||| ||| Sbjct: 289 aaggccttcgatcggcactgcaacatggtactggaaaacgtgaaggagatgtggacggag 348 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 | || ||| ||||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 349 ctgccgcggaccggtaagggcaagaagaaggtgaagcccgtgaacaaggatcggttcata 408 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||||||||| || || ||||| |||||| | ||||| ||||| Sbjct: 409 tcgaagatgttcctgcgaggcgattctgtcatcctggtcctaaggaa 455
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 |||||||||||||||||||| ||||||||||| |||||||||||| |||| || | || Sbjct: 44762 aagaacaacacccaggtgctcatcaactgccgcaacaacaagaagctgctgggcagggta 44821 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || || || |||||||||||||| || || ||||| | |||||||||||| ||| Sbjct: 44822 aaggccttcgatcggcactgcaacatggtactggaaaacgtgaaggagatgtggacggag 44881 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 | || ||| ||||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 44882 ctgccgcggaccggtaagggcaagaagaaggtgaagcccgtgaacaaggatcggttcata 44941 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||||||||| || || ||||| |||||| | ||||| ||||| Sbjct: 44942 tcgaagatgttcctgcgaggcgattctgtcatcctggtcctaaggaa 44988
>gb|AY069315.1| Drosophila melanogaster LD03002 full insert cDNA Length = 773 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 |||||||||||||||||||| ||||||||||| |||||||||||| |||| || | || Sbjct: 203 aagaacaacacccaggtgctcatcaactgccgcaacaacaagaagctgctgggcagggta 262 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || || || |||||||||||||| || || ||||| | |||||||||||| ||| Sbjct: 263 aaggccttcgatcggcactgcaacatggtactggaaaacgtgaaggagatgtggacggag 322 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 | || ||| ||||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 323 ctgccgcggaccggtaagggcaagaagaaggtgaagcccgtgaacaaggatcggttcata 382 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||||||||| || || ||||| |||||| | ||||| ||||| Sbjct: 383 tcgaagatgttcctgcgaggcgattctgtcatcctggtcctaaggaa 429
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein (F26K9.270) mRNA, complete cds Length = 541 Score = 99.6 bits (50), Expect = 1e-17 Identities = 186/230 (80%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||| ||||| |||||| | ||||| ||||| ||||||| ||| | ||||| || || Sbjct: 194 aagaataacactcaggtgttgatcaattgccgtaacaacaggaaactccttggccgagtt 253 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 ||| | |||||| | ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 254 agg-cttttgacaggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgag 312 Query: 343 gttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttcata 402 ||||| || || || ||||| |||||||| || || || || |||| || | ||||| Sbjct: 313 gttccgaaaaccggaaaaggaaagaagaaagctcttcctgttaacagagatcgattcatc 372 Query: 403 agcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 |||||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 373 agcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaaccc 422
>emb|BX933865.1| Gallus gallus finished cDNA, clone ChEST916l7 Length = 427 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||||||||| |||||||| ||||||||||| |||||||||||| |||| || ||||| Sbjct: 167 aagaacaacacgcaggtgctgatcaactgccgcaacaacaagaagctgctgggccgcgtc 226 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || ||| | |||||||| ||||| || |||||||| | |||||||||||| ||| Sbjct: 227 aaggccttcgacaggcactgcaatatggtcctggagaacgtgaaggagatgtggacggag 286 Query: 343 gt 344 || Sbjct: 287 gt 288
>emb|BX936185.1| Gallus gallus finished cDNA, clone ChEST146i23 Length = 446 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||||||||| |||||||| ||||||||||| |||||||||||| |||| || ||||| Sbjct: 186 aagaacaacacgcaggtgctgatcaactgccgcaacaacaagaagctgctgggccgcgtc 245 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 | ||| || ||| | |||||||| ||||| || |||||||| | |||||||||||| ||| Sbjct: 246 aaggccttcgacaggcactgcaatatggtcctggagaacgtgaaggagatgtggacggag 305 Query: 343 gt 344 || Sbjct: 306 gt 307
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 244 atcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgaccgtcactgc 303 ||||| ||||||||||||| ||| | ||||| || ||||||||||||||| | |||||| Sbjct: 5570 atcaattgccggaacaacaggaaacttcttgggcgagtgagggcgtttgacagacactgc 5629 Query: 304 aacatggttctcgagaacgtcagggagatgtggactgaggt 344 ||||||||||| || || ||||| ||||||||||||||||| Sbjct: 5630 aacatggttcttgaaaatgtcagagagatgtggactgaggt 5670 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 ||||||| || ||||| |||||||||||||| || || |||||||||| || |||||| Sbjct: 5749 aggttccgaaaactgggaaaggcaagaagaaagcacttccggtgaacagagatcggttca 5808 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 ||||||||||||| || || || || |||||||| |||||||||||||| || ||||||| Sbjct: 5809 taagcaagatgtttctacgtggagactcggtcattatcgtcctcaggaatccaaaatgag 5868
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 244 atcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgaccgtcactgc 303 ||||| ||||||||||||| ||| | ||||| || ||||||||||||||| | |||||| Sbjct: 10506 atcaattgccggaacaacaggaaacttcttgggcgagtgagggcgtttgacagacactgc 10447 Query: 304 aacatggttctcgagaacgtcagggagatgtggactgaggt 344 ||||||||||| || || ||||| ||||||||||||||||| Sbjct: 10446 aacatggttcttgaaaatgtcagagagatgtggactgaggt 10406 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 ||||||| || ||||| |||||||||||||| || || |||||||||| || |||||| Sbjct: 10327 aggttccgaaaactgggaaaggcaagaagaaagcacttccggtgaacagagatcggttca 10268 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatgag 460 ||||||||||||| || || || || |||||||| |||||||||||||| || ||||||| Sbjct: 10267 taagcaagatgtttctacgtggagactcggtcattatcgtcctcaggaatccaaaatgag 10208
>ref|XM_001099573.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC705126), mRNA Length = 540 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| |||||||| || ||||| ||||| | || || ||| Sbjct: 148 gtcaagaacaacacccaagtgctcatcaactgtcgcaacaataagaaactcctgggccgc 207 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 208 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 267 Query: 340 gaggttccaaagactggtaaaggcaagaagaa 371 ||||| || |||| || || ||||||||||| Sbjct: 268 gaggtccctaagagcggcaagggcaagaagaa 299
>ref|XM_001087489.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC696279), mRNA Length = 509 Score = 89.7 bits (45), Expect = 1e-14 Identities = 126/153 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| |||||||| | ||||| ||||| | || || | | Sbjct: 161 gtcaagaacaacacccaagtgctcatcaactgtggcaacaataagaaacttctgggccac 220 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || ||| | ||| |||||||||| || |||||||| | ||||||||||||| Sbjct: 221 gtgaaggccttcgacaggcaccgcaacatggtgctggagaacgtgaaggagatgtggact 280 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 ||||| || |||| || ||||||||||||||| Sbjct: 281 gaggtacccaagagcggcaaaggcaagaagaag 313
>ref|XM_982574.1| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 89.7 bits (45), Expect = 1e-14 Identities = 126/153 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 138 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 197 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 198 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 257 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 ||||| || |||| || || |||||||||||| Sbjct: 258 gaggtccccaagagcggcaagggcaagaagaag 290
>ref|XM_484260.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 89.7 bits (45), Expect = 1e-14 Identities = 126/153 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 138 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 197 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 198 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 257 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 ||||| || |||| || || |||||||||||| Sbjct: 258 gaggtccccaagagcggcaagggcaagaagaag 290
>ref|XM_915862.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 89.7 bits (45), Expect = 1e-14 Identities = 126/153 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 138 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 197 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 198 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 257 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 ||||| || |||| || || |||||||||||| Sbjct: 258 gaggtccccaagagcggcaagggcaagaagaag 290
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 89.7 bits (45), Expect = 1e-14 Identities = 126/153 (82%) Strand = Plus / Minus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 81394 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 81335 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 81334 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 81275 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 ||||| || |||| || || |||||||||||| Sbjct: 81274 gaggtccccaagagcggcaagggcaagaagaag 81242
>ref|XM_001111101.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2, transcript variant 2 (LOC715183), mRNA Length = 1373 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| |||||||| || ||||| ||||| | || || || Sbjct: 1022 gtcaagaacaacacccaagtgctcatcaactgtcgcaacaataagaaactcctgggccgt 1081 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 1082 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 1141 Query: 340 gaggttccaaagactggtaaaggcaagaagaa 371 ||||| || |||| || || ||||||||||| Sbjct: 1142 gaggtccctaagagcggcaagggcaagaagaa 1173
>ref|XM_001111069.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2, transcript variant 1 (LOC715183), mRNA Length = 714 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| |||||||| || ||||| ||||| | || || || Sbjct: 363 gtcaagaacaacacccaagtgctcatcaactgtcgcaacaataagaaactcctgggccgt 422 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 423 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 482 Query: 340 gaggttccaaagactggtaaaggcaagaagaa 371 ||||| || |||| || || ||||||||||| Sbjct: 483 gaggtccctaagagcggcaagggcaagaagaa 514
>ref|XM_001075460.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein D2 (LOC686737), mRNA Length = 490 Score = 85.7 bits (43), Expect = 2e-13 Identities = 172/215 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||| |||||||| || ||||| || ||||| || |||||||||||| | || || || Sbjct: 132 gtcaaaaacaacacgcaagtgctcattaactgtcgaaacaacaagaagctcctgggccgg 191 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 192 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 251 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||||||| | | | Sbjct: 252 gaggtccccaagagcggcaagggcaagaagaagtccaagcctgtcaacaaggaccgctac 311 Query: 400 ataagcaagatgttcctccgcggggattcggtcat 434 || |||||||||||| |||||||| || ||||| Sbjct: 312 atctccaagatgttcctgcgcggggactcagtcat 346
>ref|XM_001056581.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein D2 (LOC680309), mRNA Length = 490 Score = 85.7 bits (43), Expect = 2e-13 Identities = 172/215 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||| |||||||| || ||||| || ||||| || |||||||||||| | || || || Sbjct: 132 gtcaaaaacaacacgcaagtgctcattaactgtcgaaacaacaagaagctcctgggccgg 191 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 192 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 251 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || |||||||||||| || || || ||||||||| | | | Sbjct: 252 gaggtccccaagagcggcaagggcaagaagaagtccaagcctgtcaacaaggaccgctac 311 Query: 400 ataagcaagatgttcctccgcggggattcggtcat 434 || |||||||||||| |||||||| || ||||| Sbjct: 312 atctccaagatgttcctgcgcggggactcagtcat 346
>ref|XM_001108236.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC711841), mRNA Length = 547 Score = 83.8 bits (42), Expect = 7e-13 Identities = 186/234 (79%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| |||||||| || ||||| ||||| | || || ||| Sbjct: 160 gtcaagaacaacactcaagtgctcatcaactgtcgcaacaataagaaactcctgggccgc 219 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | ||||| |||||||| || |||||||| | ||||||||||||| Sbjct: 220 gtgaaggccttcgataggcactgtaacatggtgctggagaacgtgaaggagatgtggact 279 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttc 399 ||||| || |||| || || ||||||||||| || || || ||||| ||| | | | Sbjct: 280 gaggtccctaagagcggcaagggcaagaagaaatccaagccagtcaacaaagaccgctac 339 Query: 400 ataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccg 453 || |||||||||||| |||||||| ||||||||| | ||||| |||||||| Sbjct: 340 atctccaagatgttcctgcgcggggactcggtcatcgtggtcctgcggaacccg 393
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 83.8 bits (42), Expect = 7e-13 Identities = 138/170 (81%) Strand = Plus / Minus Query: 175 gaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaacacc 234 ||||||||||||| |||||| ||||| || | || ||| | || || ||||||||||| Sbjct: 20931 gaggaggagttcaacacgggacccctttctgttctgatgatgagtgttaagaacaacact 20872 Query: 235 caggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgac 294 ||||| | ||||||||||| ||||||| ||| | ||||| || || ||||| || ||| Sbjct: 20871 caggtcttgatcaactgccgcaacaacaggaaactccttggccgtgttagggctttcgac 20812 Query: 295 cgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 | ||||||||||||||||| || || ||||| || |||||||||||||| Sbjct: 20811 aggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgaggt 20762 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 397 ttcataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||| ||||||||||| ||||| || || || |||||||||||||| ||||| Sbjct: 20611 ttcatcagcaagatgtttctccgtggtgactccgtcatcatcgtccttaggaa 20559
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 83.8 bits (42), Expect = 7e-13 Identities = 138/170 (81%) Strand = Plus / Minus Query: 175 gaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaacacc 234 ||||||||||||| |||||| ||||| || | || ||| | || || ||||||||||| Sbjct: 107109 gaggaggagttcaacacgggacccctttctgttctgatgatgagtgttaagaacaacact 107050 Query: 235 caggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgtttgac 294 ||||| | ||||||||||| ||||||| ||| | ||||| || || ||||| || ||| Sbjct: 107049 caggtcttgatcaactgccgcaacaacaggaaactccttggccgtgttagggctttcgac 106990 Query: 295 cgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 | ||||||||||||||||| || || ||||| || |||||||||||||| Sbjct: 106989 aggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgaggt 106940 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 397 ttcataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaa 449 ||||| ||||||||||| ||||| || || || |||||||||||||| ||||| Sbjct: 106789 ttcatcagcaagatgtttctccgtggtgactccgtcatcatcgtccttaggaa 106737
>ref|XM_905150.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC631370), mRNA Length = 476 Score = 81.8 bits (41), Expect = 3e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 139 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 198 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 199 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 258 Query: 340 gaggt 344 ||||| Sbjct: 259 gaggt 263
>ref|XM_619909.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC545531), mRNA Length = 476 Score = 81.8 bits (41), Expect = 3e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 139 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 198 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 199 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 258 Query: 340 gaggt 344 ||||| Sbjct: 259 gaggt 263
>gb|AC114675.9| Mus musculus chromosome 3, clone RP24-210G2, complete sequence Length = 153302 Score = 81.8 bits (41), Expect = 3e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || ||||| |||||| |||| || || Sbjct: 102637 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 102578 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 102577 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 102518 Query: 340 gaggt 344 ||||| Sbjct: 102517 gaggt 102513
>ref|XM_654314.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1802.2), mRNA Length = 222 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 270 gcttggtcgcgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcaggga 329 ||||| |||||||| ||||||||| |||||| | ||||||||||| |||||||||| || Sbjct: 54 gcttgctcgcgtgaaggcgtttgatcgtcacagtaacatggttcttgagaacgtcaaaga 113 Query: 330 gatgtggactgag 342 ||||||||||||| Sbjct: 114 gatgtggactgag 126
>emb|CR718739.2|CNS0GHIX Tetraodon nigroviridis full-length cDNA Length = 630 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 199 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 258 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 259 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 318 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 319 gaagttccaaagagtgggaagggcaagaagaag 351
>emb|CR715732.2|CNS0GF7K Tetraodon nigroviridis full-length cDNA Length = 394 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 195 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 254 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 255 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 314 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 315 gaagttccaaagagtgggaagggcaagaagaag 347
>emb|CR714634.2|CNS0GED2 Tetraodon nigroviridis full-length cDNA Length = 610 Score = 81.8 bits (41), Expect = 3e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 |||||||||||||||| |||||||||||| || | |||| | |||||||||||| Sbjct: 136 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 195 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| || || |||||||| |||||||||||| | || || | || | || ||| Sbjct: 196 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 255 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | || ||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 256 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 315 Query: 352 actggtaaaggcaagaagaag 372 | ||| || |||||||||||| Sbjct: 316 agtgggaagggcaagaagaag 336 Score = 81.8 bits (41), Expect = 3e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 184 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 243 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 244 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 303 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaagga 392 || |||||||||| ||| || |||||||||||| || || ||||||||||| Sbjct: 304 gaagttccaaagagtgggaagggcaagaagaagtccaagccagtgaacaagga 356
>emb|CR711029.2|CNS0GBKX Tetraodon nigroviridis full-length cDNA Length = 626 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 195 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 254 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 255 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 314 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 315 gaagttccaaagagtgggaagggcaagaagaag 347
>emb|CR711244.2|CNS0GBQW Tetraodon nigroviridis full-length cDNA Length = 604 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 178 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 237 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 238 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 297 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 298 gaagttccaaagagtgggaagggcaagaagaag 330
>emb|CR709252.2|CNS0GA7K Tetraodon nigroviridis full-length cDNA Length = 634 Score = 81.8 bits (41), Expect = 3e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 |||||||||||||||| |||||||||||| || | |||| | |||||||||||| Sbjct: 155 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 214 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| || || |||||||| |||||||||||| | || || | || | || ||| Sbjct: 215 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 274 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | || ||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 275 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 334 Query: 352 actggtaaaggcaagaagaag 372 | ||| || |||||||||||| Sbjct: 335 agtgggaagggcaagaagaag 355 Score = 81.8 bits (41), Expect = 3e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 203 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 262 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 263 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 322 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaagga 392 || |||||||||| ||| || |||||||||||| || || ||||||||||| Sbjct: 323 gaagttccaaagagtgggaagggcaagaagaagtccaagccagtgaacaagga 375
>emb|CR708642.2|CNS0G9QM Tetraodon nigroviridis full-length cDNA Length = 630 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 199 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 258 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 259 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 318 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 319 gaagttccaaagagtgggaagggcaagaagaag 351
>emb|CR707901.2|CNS0G961 Tetraodon nigroviridis full-length cDNA Length = 630 Score = 81.8 bits (41), Expect = 3e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 172 gaggaggaggagttcagcacggggcccctctccatcctcatgctcagcgtcaagaacaac 231 |||||||||||||||| |||||||||||| || | |||| | |||||||||||| Sbjct: 151 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 210 Query: 232 acccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagggcgttt 291 || ||||| || || |||||||| |||||||||||| | || || | || | || ||| Sbjct: 211 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 270 Query: 292 gaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaag 351 ||| | || ||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 271 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 330 Query: 352 actggtaaaggcaagaagaag 372 | ||| || |||||||||||| Sbjct: 331 agtgggaagggcaagaagaag 351 Score = 81.8 bits (41), Expect = 3e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 199 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 258 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 259 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 318 Query: 340 gaggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaagga 392 || |||||||||| ||| || |||||||||||| || || ||||||||||| Sbjct: 319 gaagttccaaagagtgggaagggcaagaagaagtccaagccagtgaacaagga 371
>emb|CR706650.2|CNS0G87A Tetraodon nigroviridis full-length cDNA Length = 394 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 195 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 254 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 255 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 314 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 315 gaagttccaaagagtgggaagggcaagaagaag 347
>emb|CR698887.2|CNS0G27N Tetraodon nigroviridis full-length cDNA Length = 535 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 104 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 163 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 164 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 223 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 224 gaagttccaaagagtgggaagggcaagaagaag 256
>emb|CR684049.2|CNS0FQRH Tetraodon nigroviridis full-length cDNA Length = 610 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 187 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 246 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 247 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 306 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 307 gaagttccaaagagtgggaagggcaagaagaag 339
>emb|CR666668.2|CNS0FDDE Tetraodon nigroviridis full-length cDNA Length = 598 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 175 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 234 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 235 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 294 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 295 gaagttccaaagagtgggaagggcaagaagaag 327
>emb|CR662559.2|CNS0FA79 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 199 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 258 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 259 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 318 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 319 gaagttccaaagagtgggaagggcaagaagaag 351
>emb|CR662545.2|CNS0FA6V Tetraodon nigroviridis full-length cDNA Length = 616 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 194 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 253 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 254 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 313 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 314 gaagttccaaagagtgggaagggcaagaagaag 346
>emb|CR655397.2|CNS0F4OB Tetraodon nigroviridis full-length cDNA Length = 618 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 195 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 254 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 255 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 314 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 315 gaagttccaaagagtgggaagggcaagaagaag 347
>emb|CR650196.2|CNS0F0NU Tetraodon nigroviridis full-length cDNA Length = 593 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 170 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 229 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 230 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 289 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 290 gaagttccaaagagtgggaagggcaagaagaag 322
>emb|CR646312.2|CNS0EXNY Tetraodon nigroviridis full-length cDNA Length = 432 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 190 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 249 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 250 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 309 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 310 gaagttccaaagagtgggaagggcaagaagaag 342
>emb|CR636529.2|CNS0EQ47 Tetraodon nigroviridis full-length cDNA Length = 431 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 189 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 248 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 249 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 308 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 309 gaagttccaaagagtgggaagggcaagaagaag 341
>emb|CR636749.1|CNS0EQAB Tetraodon nigroviridis full-length cDNA Length = 381 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 210 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 269 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 270 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 329 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 330 gaagttccaaagagtgggaagggcaagaagaag 362
>emb|CR635163.2|CNS0EP29 Tetraodon nigroviridis full-length cDNA Length = 420 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 178 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 237 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 238 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 297 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 298 gaagttccaaagagtgggaagggcaagaagaag 330
>emb|CR634479.2|CNS0EOJ9 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 189 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 248 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 249 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 308 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 309 gaagttccaaagagtgggaagggcaagaagaag 341
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Minus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaagactggt 357 |||||||||||||| || |||||||| | |||||||||||||||||| || |||| ||| Sbjct: 7655 cactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtacccaagagtggc 7596 Query: 358 aaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatgttcctc 417 || |||||||||||| || || || ||||| ||| | | ||| |||||||||||| Sbjct: 7595 aagggcaagaagaagtccaagccagtcaacaaagaccgctacatctccaagatgttcctg 7536 Query: 418 cgcggggattcggtcatcatcgtcctcaggaacccg 453 |||||||| || |||||| | ||||| |||||||| Sbjct: 7535 cgcggggactcagtcatcgtggtcctgcggaacccg 7500 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaa 266 ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 8392 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaa 8346
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||| ||||| |||||| | ||||| ||||| ||||||| ||| | ||||| || || Sbjct: 89025 aagaataacactcaggtgttgatcaattgccgtaacaacaggaaactccttggccgagtt 88966 Query: 283 agggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactgag 342 ||||| |||||| | ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 88965 agggcttttgacaggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgag 88906 Query: 343 gtt 345 ||| Sbjct: 88905 gtt 88903 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 397 ttcataagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 ||||| |||||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 88763 ttcatcagcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaaccc 88708
>ref|XM_963683.1| PREDICTED: Tribolium castaneum similar to CG1249-PA (LOC657212), mRNA Length = 357 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtg 282 ||||||||||| |||||||| || |||||||| ||||||||||| ||||| || || ||| Sbjct: 106 aagaacaacactcaggtgctgataaactgccgaaacaacaagaaattgctggggcgggtg 165 Query: 283 agggcgtttgaccgtcactgcaacat 308 | |||||| || || ||||||||||| Sbjct: 166 aaggcgttcgatcggcactgcaacat 191
>emb|CU137659.1| Medicago truncatula chromosome 5 clone mth2-70k21, COMPLETE SEQUENCE Length = 91424 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 |||||||||||||||||||||| ||||| ||||| | || || ||||| || || |||| Sbjct: 72423 aggttccaaagactggtaaaggaaagaaaaaggctcagccagtaaacaaagatagattca 72482 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaat 457 ||||||| ||||| || || || ||||| |||||||| || || |||||||| |||| Sbjct: 72483 taagcaaaatgtttcttcgtggagattctgtcatcattgttcttaggaaccccaaat 72539
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 341 aggttccaaagactggtaaaggcaagaagaaggccctcccggtgaacaaggacaggttca 400 |||||||||||||||||||||| ||||| ||||| | || || ||||| || || |||| Sbjct: 92949 aggttccaaagactggtaaaggaaagaaaaaggctcagccagtaaacaaagatagattca 92890 Query: 401 taagcaagatgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaat 457 ||||||| ||||| || || || ||||| |||||||| || || |||||||| |||| Sbjct: 92889 taagcaaaatgtttcttcgtggagattctgtcatcattgttcttaggaaccccaaat 92833
>emb|CR719572.2|CNS0GI62 Tetraodon nigroviridis full-length cDNA Length = 611 Score = 73.8 bits (37), Expect = 7e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 185 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 244 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 245 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 304 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || || ||||||| ||| || |||||||||||| Sbjct: 305 gaagtcccaaagagtgggaagggcaagaagaag 337
>emb|CR665557.2|CNS0FCIJ Tetraodon nigroviridis full-length cDNA Length = 612 Score = 73.8 bits (37), Expect = 7e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 190 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 249 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || |||||| | || ||| ||||||| || || ||||| | |||||||||||| Sbjct: 250 gtcaaagcttttgacaggcattgccacatggtcctggaaaacgtgaaggagatgtggaca 309 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 310 gaagttccaaagagtgggaagggcaagaagaag 342
>emb|CR660721.2|CNS0F8S7 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 73.8 bits (37), Expect = 7e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || || |||||||| |||||||||||| | || || | Sbjct: 189 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 248 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | || ||| || | || ||||||||||| || || ||||| | |||||||||||| Sbjct: 249 gtcaaagctttttacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 308 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 || |||||||||| ||| || |||||||||||| Sbjct: 309 gaagttccaaagagtgggaagggcaagaagaag 341
>emb|BX027975.1|CNS08TQZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagg 285 |||||||| ||||| || || |||||||| |||||||| ||| |||| || ||||||| Sbjct: 303 aacaacacgcaggtactgataaactgccgcaacaacaaaaagctgctggggcgcgtgaaa 244 Query: 286 gcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| || |||||||||||||| || || ||||| | ||| |||||||| Sbjct: 243 gcgtttgatcgccactgcaacatggtgctggaaaacgtgaaggaaatgtggac 191
>emb|BX027974.1|CNS08TQY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 523 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagg 285 |||||||| ||||| || || |||||||| |||||||| ||| |||| || ||||||| Sbjct: 180 aacaacacgcaggtactgataaactgccgcaacaacaaaaagctgctggggcgcgtgaaa 239 Query: 286 gcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| || |||||||||||||| || || ||||| | ||| |||||||| Sbjct: 240 gcgtttgatcgccactgcaacatggtgctggaaaacgtgaaggaaatgtggac 292
>gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, complete sequence Length = 34558 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaagactggt 357 |||||||||||||| ||||||||||||| ||||||||||| || || || |||||||| Sbjct: 12349 cactgcaacatggtgctcgagaacgtcaaagagatgtggacagaagtcccgaagactgga 12290 Query: 358 aaaggcaagaagaaggc 374 || || ||||||||||| Sbjct: 12289 aagggaaagaagaaggc 12273 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 409 atgttcctccgcggggattcggtcatcatcgtcctcaggaaccc 452 ||||||||||| || || ||||||||| ||||| ||| |||||| Sbjct: 12238 atgttcctccgtggagactcggtcatcctcgtcgtcaagaaccc 12195
>ref|XM_318388.2| Anopheles gambiae str. PEST ENSANGP00000002741 (ENSANGG00000002272), partial mRNA Length = 417 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcgtgagg 285 |||||||| ||||| || || |||||||| |||||||| ||| |||| || ||||||| Sbjct: 106 aacaacacgcaggtactgataaactgccgcaacaacaaaaagctgctggggcgcgtgaaa 165 Query: 286 gcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| || |||||||||||||| || || ||||| | ||| |||||||| Sbjct: 166 gcgtttgatcgccactgcaacatggtgctggaaaacgtgaaggaaatgtggac 218
>ref|XM_214847.3| PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein D2 (predicted) (Snrpd2_predicted), mRNA Length = 532 Score = 71.9 bits (36), Expect = 3e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 221 tcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcg 280 |||| |||||||| || ||||| || ||||| || |||||||||||| | || || || | Sbjct: 175 tcaaaaacaacacgcaagtgctcattaactgtcgaaacaacaagaagctcctgggccggg 234 Query: 281 tgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactg 340 ||| ||| |||||| | |||||||||||||| || || || || | |||||| ||||||| Sbjct: 235 tgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatatggactg 294 Query: 341 aggttccaaagactggtaaaggcaagaagaag 372 |||| || |||| || || |||||||||||| Sbjct: 295 aggtccccaagagcggcaagggcaagaagaag 326
>ref|XM_001054247.1| PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein D2 (predicted) (Snrpd2_predicted), mRNA Length = 532 Score = 71.9 bits (36), Expect = 3e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 221 tcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgcg 280 |||| |||||||| || ||||| || ||||| || |||||||||||| | || || || | Sbjct: 175 tcaaaaacaacacgcaagtgctcattaactgtcgaaacaacaagaagctcctgggccggg 234 Query: 281 tgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactg 340 ||| ||| |||||| | |||||||||||||| || || || || | |||||| ||||||| Sbjct: 235 tgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatatggactg 294 Query: 341 aggttccaaagactggtaaaggcaagaagaag 372 |||| || |||| || || |||||||||||| Sbjct: 295 aggtccccaagagcggcaagggcaagaagaag 326
>ref|XM_001083377.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC695079), mRNA Length = 578 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||| |||||||| ||||| |||||||| || ||||| ||||| | || || || Sbjct: 189 gtcaagaataacacccaagtgctcatcaactgtcgcaacaataagaaactcctgggccgg 248 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||||||||||| Sbjct: 249 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 308 Query: 340 ga 341 || Sbjct: 309 ga 310
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaagactggt 357 |||||||||||||| || || || || | ||||||||||||||||||||| |||| || Sbjct: 57385 cactgcaacatggtgctggaaaatgtgaaggagatgtggactgaggttcccaagagcggc 57326 Query: 358 aaaggcaagaagaaggccctcccggtgaacaaggacaggttcataagcaagatgttcctc 417 || ||||||||||| || || || ||||||||| | | ||| |||||||||||| Sbjct: 57325 aagggcaagaagaaatccaagcctgtcaacaaggaccgctacatctccaagatgttcctg 57266 Query: 418 cgcggggattcggtcatc 435 |||||||| ||||||||| Sbjct: 57265 cgcggggactcggtcatc 57248 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| || ||||| || |||||||||||| |||| || || Sbjct: 58541 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 58482 Query: 280 gtgagggcgtttgac 294 |||| ||| |||||| Sbjct: 58481 gtgaaggcctttgac 58467
>gb|AY949614.1| Pongo pygmaeus orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 65.9 bits (33), Expect = 2e-07 Identities = 123/153 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| |||||| | || |||||||||| | | || | | Sbjct: 106 gtcaagaacaacacccaagtgctcatcaaccgtcgccacaacaagaaactcttgggccac 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || ||||| || | ||||||||||||| Sbjct: 166 gtgaaggccttccacaggcactgcaacatggtgctggagaatgtgaaggagatgtggact 225 Query: 340 gaggttccaaagactggtaaaggcaagaagaag 372 ||||| || |||| || || |||||||||||| Sbjct: 226 gaggtacctaagagcggcaagggcaagaagaag 258
>gb|AY949613.1| Gorilla gorilla orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 354 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| |||||||| || |||||||||| | || || | | Sbjct: 106 gtcaagaacaacacgcaagtgctcatcaactgtcgccacaacaagaaactcctgggccac 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | |||||||||||| Sbjct: 166 gtgaaggccttccacaggcactgcaacatggtgctggagaacgtgaaggagatgtggacc 225 Query: 340 gaggt 344 ||||| Sbjct: 226 gaggt 230
>ref|XM_001177104.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC757948 (LOC757948), mRNA Length = 838 Score = 61.9 bits (31), Expect = 3e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || ||||||||| | ||||||||||| || || || || Sbjct: 166 gtcaagaacaacacacaggttctaatcaactgcagaaacaacaagaaattactaggacgt 225 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 || | ||| |||||| | || ||||| ||||| || ||||| || | |||||||||||| Sbjct: 226 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 284
>ref|XM_001178435.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC754356 (LOC754356), mRNA Length = 838 Score = 61.9 bits (31), Expect = 3e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| ||||| || ||||||||| | ||||||||||| || || || || Sbjct: 166 gtcaagaacaacacacaggttctaatcaactgcagaaacaacaagaaattactaggacgt 225 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 || | ||| |||||| | || ||||| ||||| || ||||| || | |||||||||||| Sbjct: 226 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 284
>ref|XM_521555.2| PREDICTED: Pan troglodytes similar to Sm D2 (LOC466153), mRNA Length = 533 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| |||||||| || |||||| ||| | || || | | Sbjct: 161 gtcaagaacaacacgcaagtgctcatcaactgtcgccacaacacgaaactcctgggccac 220 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||| | | ||||||||||||| Sbjct: 221 gtgaaggccttccacaggcactgcaacatggtgctggagaacatgaaggagatgtggact 280 Query: 340 gaggttccaaagactggtaaaggcaagaag 369 ||||| || |||| || || ||||||||| Sbjct: 281 gaggtacccaagagcggcaagggcaagaag 310
>ref|XM_937349.2| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC648295), mRNA Length = 354 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| |||||||| || |||||| ||| | || || | | Sbjct: 106 gtcaagaacaacacgcaagtgctcatcaactgtcgccacaacacgaaactcctgggccac 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||| ||||||| Sbjct: 166 gtgaaggccttccacaggcactgcaacatggtgctggagaacgtgaaggagacgtggact 225 Query: 340 gaggttccaaagactggtaaaggcaagaag 369 ||||| || |||| || || ||||||||| Sbjct: 226 gaggtacccaagagcggcaagggcaagaag 255
>ref|XM_061427.3| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC119358), mRNA Length = 354 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| |||||||| || |||||| ||| | || || | | Sbjct: 106 gtcaagaacaacacgcaagtgctcatcaactgtcgccacaacacgaaactcctgggccac 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||| ||||||| Sbjct: 166 gtgaaggccttccacaggcactgcaacatggtgctggagaacgtgaaggagacgtggact 225 Query: 340 gaggttccaaagactggtaaaggcaagaag 369 ||||| || |||| || || ||||||||| Sbjct: 226 gaggtacccaagagcggcaagggcaagaag 255
>ref|XM_505089.1| Yarrowia lipolytica CLIB122, YALI0F06644g predicted mRNA Length = 348 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 285 ggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||||||| |||| ||||||||| || |||||||| | |||||||||||| Sbjct: 183 ggcgtttgaccggcactccaacatggtgctggagaacgtgaaggagatgtggac 236
>ref|XM_387194.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07018.1) partial mRNA Length = 468 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 301 tgcaacatggttctcgagaacgtcagggagatgtggac 338 ||||||||||||||||||||||||| ||| |||||||| Sbjct: 319 tgcaacatggttctcgagaacgtcaaggaaatgtggac 356
>ref|NM_073603.2| Caenorhabditis elegans Small Nuclear Ribonucleoprotein family member (snr-4) (snr-4) mRNA, complete cds Length = 565 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 301 tgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaagactggtaaa 360 ||||||||||| ||||| || || | ||| ||||||||||| || ||||||||||| || Sbjct: 225 tgcaacatggtcctcgaaaatgtgaaggaaatgtggactgaagtgccaaagactggaaag 284 Query: 361 ggcaagaagaaggc 374 || ||||||||||| Sbjct: 285 ggaaagaagaaggc 298
>ref|XM_748269.1| Aspergillus fumigatus Af293 small nuclear ribonucleoprotein SmD2 (Afu5g12910) partial mRNA Length = 369 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 285 ggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||||||| |||||||| ||||| ||||||||||| | ||||||||||| Sbjct: 213 ggcgtttgaccgccactgcaatatggtgctcgagaacgtgaaagagatgtggac 266
>emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chromosome 10 Contains a small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2) pseudogene and a novel gene (FLJ35900), complete sequence Length = 113039 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || ||||| |||||||| || |||||| ||| | || || | | Sbjct: 82610 gtcaagaacaacacgcaagtgctcatcaactgtcgccacaacacgaaactcctgggccac 82669 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| || || | |||||||||||||| || |||||||| | ||||| ||||||| Sbjct: 82670 gtgaaggccttccacaggcactgcaacatggtgctggagaacgtgaaggagacgtggact 82729 Query: 340 gaggttccaaagactggtaaaggcaagaag 369 ||||| || |||| || || ||||||||| Sbjct: 82730 gaggtacccaagagcggcaagggcaagaag 82759
>emb|Z78012.1|CEC52E4 Caenorhabditis elegans Cosmid C52E4, complete sequence Length = 33089 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 301 tgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaagactggtaaa 360 ||||||||||| ||||| || || | ||| ||||||||||| || ||||||||||| || Sbjct: 14860 tgcaacatggtcctcgaaaatgtgaaggaaatgtggactgaagtgccaaagactggaaag 14801 Query: 361 ggcaagaagaaggc 374 || ||||||||||| Sbjct: 14800 ggaaagaagaaggc 14787
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 285 ggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||||||| |||| ||||||||| || |||||||| | |||||||||||| Sbjct: 981135 ggcgtttgaccggcactccaacatggtgctggagaacgtgaaggagatgtggac 981188
>ref|XM_001229934.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_03419) mRNA, complete cds Length = 312 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 289 tttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggactga 341 |||||||| |||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 193 tttgaccgccactgcaacatgattctggagaacgttaaagagatgtggactga 245
>ref|XM_001211176.1| Aspergillus terreus NIH2624 small nuclear ribonucleoprotein Sm D2 (ATEG_01998) mRNA, complete cds Length = 348 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||||||||| || |||||||||| |||||||||||| Sbjct: 205 cactgcaacatggtgctggagaacgtcaaggagatgtggac 245 Score = 40.1 bits (20), Expect = 9.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 385 aacaaggacaggttcataagcaagatgttcctccgcggggattcggtcatcatcgt 440 ||||||||| | || || |||||||||||| | ||||| ||||| |||||| |||| Sbjct: 280 aacaaggaccgctttatcagcaagatgttcttgcgcggtgattccgtcatcctcgt 335
>ref|XM_539112.2| PREDICTED: Canis familiaris similar to small nuclear ribonucleoprotein D2 (LOC481991), mRNA Length = 361 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgc 252 |||||||||||||||||||||||||| |||||| Sbjct: 113 gtcaagaacaacacccaggtgcttattaactgc 145
>emb|CT032728.1| Platynereis dumerilii EST IB0AAA32DE04FM1 Length = 699 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 219 cgtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaag 267 ||||||||||||||| ||||| || ||||||||| | |||||||||||| Sbjct: 498 cgtcaagaacaacacacaggtcctcatcaactgcagaaacaacaagaag 450
>ref|XM_001176405.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC757655 (LOC757655), mRNA Length = 652 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || || || ||||||||| | ||||||||||| || || || || Sbjct: 175 gtcaagaacaacacacaagttctaatcaactgcagaaacaacaagaaattactaggacgt 234 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 || | ||| |||||| | || ||||| ||||| || ||||| || | |||||||||||| Sbjct: 235 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 293
>ref|XM_001177365.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC753400 (LOC753400), mRNA Length = 652 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 |||||||||||||| || || || ||||||||| | ||||||||||| || || || || Sbjct: 175 gtcaagaacaacacacaagttctaatcaactgcagaaacaacaagaaattactaggacgt 234 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggac 338 || | ||| |||||| | || ||||| ||||| || ||||| || | |||||||||||| Sbjct: 235 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 293
>dbj|AB225845.1| Aspergillus oryzae cDNA, contig sequence: AoEST2700 Length = 893 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 276 tcgcgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtg 335 |||||||| |||||| || || |||||||||||||| | |||||||||| ||| ||||| Sbjct: 224 tcgcgtgaaggcgttcgatcgccactgcaacatggtgttggagaacgtcaaggaaatgtg 283 Query: 336 gac 338 ||| Sbjct: 284 gac 286
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 276 tcgcgtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtg 335 |||||||| |||||| || || |||||||||||||| | |||||||||| ||| ||||| Sbjct: 1051415 tcgcgtgaaggcgttcgatcgccactgcaacatggtgttggagaacgtcaaggaaatgtg 1051356 Query: 336 gac 338 ||| Sbjct: 1051355 gac 1051353
>ref|XM_694891.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571315), mRNA Length = 745 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgct 272 |||||||| ||||| || ||||||||||| |||||||||||| |||| Sbjct: 212 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgct 258
>ref|XM_694863.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571288), mRNA Length = 745 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgct 272 |||||||| ||||| || ||||||||||| |||||||||||| |||| Sbjct: 212 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgct 258
>ref|NM_001017582.1| Danio rerio zgc:110732 (zgc:110732), mRNA gb|BC093003.1| Danio rerio zgc:110732, mRNA (cDNA clone MGC:110732 IMAGE:7177415), complete cds Length = 756 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgct 272 |||||||| ||||| || ||||||||||| |||||||||||| |||| Sbjct: 200 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgct 246
>emb|BX663502.9| Zebrafish DNA sequence from clone CH211-202C21 in linkage group 18, complete sequence Length = 188674 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgct 272 |||||||| ||||| || ||||||||||| |||||||||||| |||| Sbjct: 104217 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgct 104171
>emb|AL928979.4| Zebrafish DNA sequence from clone DKEY-113G17, complete sequence Length = 193205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 226 aacaacacccaggtgcttatcaactgccggaacaacaagaagttgct 272 |||||||| ||||| || ||||||||||| |||||||||||| |||| Sbjct: 126464 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgct 126418
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 327 ggagatgtggactgaggttccaaagactggtaaaggcaagaagaag 372 |||||||||||||||||| || |||| ||| || |||||||||||| Sbjct: 80939 ggagatgtggactgaggtacccaagagtggcaatggcaagaagaag 80984
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 327 ggagatgtggactgaggttccaaagactggtaaaggcaagaagaag 372 |||||||||||||||||| || |||| ||| || |||||||||||| Sbjct: 28425 ggagatgtggactgaggtacccaagagtggcaatggcaagaagaag 28380
>ref|XM_361539.1| Magnaporthe grisea 70-15 hypothetical protein (MG04013.4) partial mRNA Length = 354 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggac 338 |||||||| ||||| ||||||||||| | |||||||||||| Sbjct: 202 cactgcaatatggtgctcgagaacgtgaaggagatgtggac 242
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 |||| ||| |||||| | |||||||||||||| || || || || | ||||||||||||| Sbjct: 147526 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 147585 Query: 340 gaggt 344 ||||| Sbjct: 147586 gaggt 147590
>gb|AY949615.1| Hylobates lar orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Plus Query: 220 gtcaagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgcttggtcgc 279 ||||||||||||||||| ||||| |||||||| || |||| ||||| | || || | | Sbjct: 106 gtcaagaacaacacccaagtgctcatcaactgtcgcaacagtaagaaactcctgggccac 165 Query: 280 gtgagggcgtttgaccgtcactgcaacatggttctcgagaacgtcagggagatgtggact 339 || | ||| || || | ||||| |||||||| || |||||| | | ||||||||||||| Sbjct: 166 gtcaaggccttcgaaaggcactgtaacatggtgctggagaacatgaaggagatgtggact 225 Query: 340 gaggt 344 ||||| Sbjct: 226 gaggt 230
>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12, complete sequence Length = 187972 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 137198 caggggaagaaggaggaggaggag 137221
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 102701 caggggaagaaggaggaggaggag 102678
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 70608 caggggaagaaggaggaggaggag 70585
>gb|AC137586.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0054A16, complete sequence Length = 164605 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 22513 caggggaagaaggaggaggaggag 22536
>gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0050G15, complete sequence Length = 152556 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 29908 caggggaagaaggaggaggaggag 29885
>gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0019N10, from chromosome 10, complete sequence Length = 148704 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 38876 caggggaagaaggaggaggaggag 38853 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 ||||||||| |||||||||||||| Sbjct: 25226 caggggaaggaggaggaggaggag 25249
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 21125 caggggaagaaggaggaggaggag 21148 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 ||||||||| |||||||||||||| Sbjct: 34775 caggggaaggaggaggaggaggag 34752
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 6087918 caggggaagaaggaggaggaggag 6087895 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 11792184 caggggaagaaggaggaggaggag 11792207 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 15408861 caggggaagaaggaggaggaggag 15408884 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 17660715 caggggaagaaggaggaggaggag 17660692 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggagg 181 |||||||||||||||||||| Sbjct: 21351309 ggggaagaaggaggaggagg 21351290 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggaagaaggaggaggaggag 183 |||||||||||||||||||| Sbjct: 25532472 ggaagaaggaggaggaggag 25532453
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 11893194 caggggaagaaggaggaggaggag 11893171 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 ||||||||| |||||||||||||| Sbjct: 11879544 caggggaaggaggaggaggaggag 11879567
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 12800019 caggggaagaaggaggaggaggag 12800042 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 27825853 ggggaagaaggaggaggaggag 27825874
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 3000568 caggggaagaaggaggaggaggag 3000591 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggag 180 |||||||||||||||||||| Sbjct: 6244681 aggggaagaaggaggaggag 6244700 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ggaagaaggaggaggaggag 183 |||||||||||||||||||| Sbjct: 8975983 ggaagaaggaggaggaggag 8976002 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggagga 179 |||||||||||||||||||| Sbjct: 9177171 caggggaagaaggaggagga 9177190 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 14646130 caggagaagaaggaggaggaggag 14646153 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ggaagaaggaggaggaggag 183 |||||||||||||||||||| Sbjct: 18183336 ggaagaaggaggaggaggag 18183355
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 7769278 caggggaagaaggaggaggaggag 7769301 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 28738365 aggggaagaaggaggaggaggag 28738387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggagg 181 ||||||||||||||||||||| Sbjct: 20214302 aggggaagaaggaggaggagg 20214322 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 8692720 caggagaagaaggaggaggaggag 8692697 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 12980566 caggagaagaaggaggaggaggag 12980589
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 9565729 caggggaagaaggaggaggaggag 9565706 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggagga 182 ||||||||||||||||||||||| Sbjct: 6127759 caggggaagaaggaggaggagga 6127781 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 gccgtcgcgtccatggcggagg 145 |||||||||||||||||||||| Sbjct: 8546138 gccgtcgcgtccatggcggagg 8546159 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tcaggggaagaaggaggaggaggag 183 |||||||||| |||||||||||||| Sbjct: 8865459 tcaggggaaggaggaggaggaggag 8865435 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 ||||||||||||||| |||||||| Sbjct: 5433231 caggggaagaaggagaaggaggag 5433254 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 gaagaaggaggaggaggagttcag 188 ||||||||||||||||||| |||| Sbjct: 23174590 gaagaaggaggaggaggagatcag 23174613
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 15393187 caggggaagaaggaggaggaggag 15393164 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 32430884 caggggaagaaggaggaggaggag 32430907 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||| ||||| Sbjct: 14674747 caggggaagaaggaggagcaggag 14674770 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 29191597 caggagaagaaggaggaggaggag 29191574 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||| ||||||||||||||||||| Sbjct: 29992430 caggagaagaaggaggaggaggag 29992453 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggaagaaggaggaggaggag 183 |||||||||||||||||||| Sbjct: 33314668 ggaagaaggaggaggaggag 33314649
>emb|AL365258.24| Human DNA sequence from clone RP11-448G4 on chromosome 1 Contains the 5' end of a novel gene, a eukaryotic translation elongation factor 1 alpha (EEF1A) pseudogene, a novel pseudogene, a novel gene and a ribosomal protein L24 (RPL24) pseudogene, complete sequence Length = 129343 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 100005 caggggaagaaggaggaggaggag 100028
>dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111E11 Length = 152835 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 96858 caggggaagaaggaggaggaggag 96881
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 81776 caggggaagaaggaggaggaggag 81799
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 46623 caggggaagaaggaggaggaggag 46646
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 537 caggggaagaaggaggaggaggag 560
>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0058D03 Length = 184235 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 144014 caggggaagaaggaggaggaggag 144037
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 63969 caggggaagaaggaggaggaggag 63946
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 92397 caggggaagaaggaggaggaggag 92420
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 34277 caggggaagaaggaggaggaggag 34300
>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09, complete sequence Length = 160462 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 caggggaagaaggaggaggaggag 183 |||||||||||||||||||||||| Sbjct: 47835 caggggaagaaggaggaggaggag 47812
>emb|CR855024.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0160I04, complete sequence Length = 84262 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggagga 182 ||||||||||||||||||||||| Sbjct: 71892 caggggaagaaggaggaggagga 71914
>ref|XM_001191525.1| PREDICTED: Strongylocentrotus purpuratus similar to ENSANGP00000018326 (LOC577433), mRNA Length = 1917 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 444 caggaacccgaaatgagtttggacgac 470 ||||||| ||||||||||||||||||| Sbjct: 922 caggaacacgaaatgagtttggacgac 948
>ref|XR_021175.1| PREDICTED: Pan troglodytes hypothetical protein LOC741912 (LOC741912), mRNA Length = 768 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 |||||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 405 cactgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 451
>ref|XR_019228.1| PREDICTED: Homo sapiens hypothetical LOC650068 (LOC650068), mRNA Length = 769 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 |||||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 405 cactgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 451
>ref|XR_017390.1| PREDICTED: Homo sapiens hypothetical LOC645339 (LOC645339), mRNA Length = 769 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 |||||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 405 cactgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 451
>emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chromosome 9, complete sequence Length = 193236 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 56773 aggggaagaaggaggaggaggag 56795
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 112470 aggggaagaaggaggaggaggag 112492
>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence Length = 203180 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 21631 aggggaagaaggaggaggaggag 21609
>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence Length = 236510 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 217868 aggggaagaaggaggaggaggag 217846
>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence Length = 221980 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 113750 aggggaagaaggaggaggaggag 113728
>gb|AC131118.4| Mus musculus BAC clone RP24-386M5 from chromosome 19, complete sequence Length = 116409 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 62668 aggggaagaaggaggaggaggag 62690 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ggaagaaggaggaggaggag 183 |||||||||||||||||||| Sbjct: 62304 ggaagaaggaggaggaggag 62323
>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence Length = 206192 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 gacaggttcataagcaagatgtt 413 ||||||||||||||||||||||| Sbjct: 76849 gacaggttcataagcaagatgtt 76871
>gb|AC124424.4| Mus musculus BAC clone RP24-230J3 from chromosome 2, complete sequence Length = 190802 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 179618 aggggaagaaggaggaggaggag 179596
>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence Length = 209359 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 80261 aggggaagaaggaggaggaggag 80239
>gb|AC102613.7| Mus musculus chromosome 1, clone RP23-418C16, complete sequence Length = 201275 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 106033 aggggaagaaggaggaggaggag 106055
>gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, complete sequence Length = 151717 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 4347 aggggaagaaggaggaggaggag 4325
>ref|XM_777661.1| PREDICTED: Strongylocentrotus purpuratus similar to ENSANGP00000018326 (LOC577433), mRNA Length = 1917 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 444 caggaacccgaaatgagtttggacgac 470 ||||||| ||||||||||||||||||| Sbjct: 922 caggaacacgaaatgagtttggacgac 948
>gb|BC014600.1| Homo sapiens cDNA clone MGC:26736 IMAGE:4826560, complete cds Length = 782 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 |||||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 408 cactgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 454
>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24 Length = 157180 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 304 aacatggttctcgagaacgtcagggagatgtggac 338 |||||||| || |||||||||| |||||||||||| Sbjct: 129247 aacatggtgctggagaacgtcaaggagatgtggac 129213 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 385 aacaaggacaggttcataagcaagatgtt 413 |||||||||||||| || ||||||||||| Sbjct: 129169 aacaaggacaggtttatcagcaagatgtt 129141 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gggaagaaggaggaggagga 182 |||||||||||||||||||| Sbjct: 11097 gggaagaaggaggaggagga 11078
>gb|AC100814.2| Homo sapiens chromosome 8, clone CTD-3025N20, complete sequence Length = 169537 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 30594 aggggaagaaggaggaggaggag 30572
>emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chromosome 9, complete sequence Length = 219139 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaaga 352 ||||||||||| || || || || || | |||||||||||||||||| ||||||| Sbjct: 210599 cactgcaacatagtgctggaaaaggtaaaggagatgtggactgaggtcccaaaga 210653
>gb|AC022033.10| Homo sapiens chromosome 8, clone RP11-214C21, complete sequence Length = 175298 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 90066 aggggaagaaggaggaggaggag 90088
>emb|AL445524.28| Human DNA sequence from clone RP11-295G20 on chromosome 1 Contains the 5' end of the EGLN1 gene for egl nine homolog 1 (C. elegans), a small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2) pseudogene, a novel gene, the 5' end of the TSNAX gene for translin-associated factor X and a CpG island, complete sequence Length = 154073 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggt 344 |||||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 66902 cactgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 66856
>gb|AC160394.2| Mus musculus BAC clone RP23-116C19 from chromosome 9, complete sequence Length = 201200 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 28535 aggggaagaaggaggaggaggag 28513
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence Length = 202301 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 137280 aggggaagaaggaggaggaggag 137258
>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence Length = 134932 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 298 cactgcaacatggttctcgagaacgtcagggagatgtggactgaggttccaaaga 352 ||||||||||| || || || || || | |||||||||||||||||| ||||||| Sbjct: 2194 cactgcaacatagtgctggaaaaggtaaaggagatgtggactgaggtcccaaaga 2248
>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence Length = 206116 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 182290 aggggaagaaggaggaggaggag 182268
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 157475 aggggaagaaggaggaggaggag 157453
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 85361 aggggaagaaggaggaggaggag 85383
>emb|AL591113.14| Mouse DNA sequence from clone RP23-253E9 on chromosome 11 Contains a phosphoglycerate mutase (Pgam) family pseudogene, a pseudogene similar to part of chondroitin sulfate proteoglycan 6 Cspg6, the gene for a novel protein similar to human DSCAM-interacting protein 1, a novel gene, the Crlf3 gene for cytokine receptor-like factor 3, the 5' end of a novel gene and a CpG island, complete sequence Length = 204106 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 74327 aggggaagaaggaggaggaggag 74349
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 46140 aggggaagaaggaggaggaggag 46162
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 138931 aggggaagaaggaggaggaggag 138953
>ref|XM_956031.1| Neurospora crassa OR74A hypothetical protein (NCU03778.1) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 304 aacatggttctcgagaacgtcagggagatgtggac 338 |||||||| || |||||||||| |||||||||||| Sbjct: 214 aacatggtgctggagaacgtcaaggagatgtggac 248 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 385 aacaaggacaggttcataagcaagatgtt 413 |||||||||||||| || ||||||||||| Sbjct: 292 aacaaggacaggtttatcagcaagatgtt 320
>dbj|AP000919.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-737O24, complete sequence Length = 184440 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 181394 aggggaagaaggaggaggaggag 181416
>emb|CT571268.7| Mouse DNA sequence from clone RP23-275M21 on chromosome 12, complete sequence Length = 178441 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 47859 aggggaagaaggaggaggaggag 47881
>dbj|AP005431.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-193E15, complete sequence Length = 177785 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 57398 aggggaagaaggaggaggaggag 57420
>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence Length = 162554 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 38633 aggggaagaaggaggaggaggag 38655
>gb|AC133651.4| Mus musculus BAC clone RP24-239C15 from 1, complete sequence Length = 178756 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 164507 aggggaagaaggaggaggaggag 164485
>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20, complete sequence Length = 147108 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 caggggaagaaggaggaggagga 182 ||||||||||||||||||||||| Sbjct: 23544 caggggaagaaggaggaggagga 23566
>gb|AC122220.4| Mus musculus BAC clone RP23-122B15 from 9, complete sequence Length = 188580 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 18233 aggggaagaaggaggaggaggag 18255
>emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chromosome 2, complete sequence Length = 167210 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 25603 aggggaagaaggaggaggaggag 25625
>emb|AL928634.8| Mouse DNA sequence from clone RP23-363G7 on chromosome 4, complete sequence Length = 156427 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 79301 aggggaagaaggaggaggaggag 79279
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 169417 aggggaagaaggaggaggaggag 169395
>emb|AL844163.7| Mouse DNA sequence from clone RP23-467L21 on chromosome 2, complete sequence Length = 165671 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 41843 aggggaagaaggaggaggaggag 41865
>gb|AC161878.3| Mus musculus BAC clone RP23-303B4 from chromosome 1, complete sequence Length = 169556 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 78904 aggggaagaaggaggaggaggag 78926
>dbj|AP001206.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1396H2 Length = 162392 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggaggag 183 ||||||||||||||||||||||| Sbjct: 80323 aggggaagaaggaggaggaggag 80301
>emb|CT830660.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106P12, full insert sequence Length = 1421 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 gccgtcgcgtccatggcggagg 145 |||||||||||||||||||||| Sbjct: 135 gccgtcgcgtccatggcggagg 114
>ref|NM_001069008.1| Oryza sativa (japonica cultivar-group) Os08g0556200 (Os08g0556200) mRNA, complete cds Length = 622 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 14 ggggaagaaggaggaggaggag 35
>ref|NM_001058823.1| Oryza sativa (japonica cultivar-group) Os04g0228100 (Os04g0228100) mRNA, complete cds Length = 1131 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 gccgtcgcgtccatggcggagg 145 |||||||||||||||||||||| Sbjct: 57 gccgtcgcgtccatggcggagg 36
>emb|CT030665.11| Mouse DNA sequence from clone RP23-135L20 on chromosome 16, complete sequence Length = 218483 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 49086 ggggaagaaggaggaggaggag 49065
>ref|XM_985038.1| PREDICTED: Mus musculus hypothetical protein LOC666625 (LOC666625), mRNA Length = 1189 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 607 ggggaagaaggaggaggaggag 628
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 128157 ggggaagaaggaggaggaggag 128136
>gb|AC160016.2| Mus musculus BAC clone RP24-421D3 from chromosome 9, complete sequence Length = 186944 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggagga 182 |||||||||||||||||||||| Sbjct: 16448 aggggaagaaggaggaggagga 16427
>ref|NM_001005128.1| Xenopus tropicalis MGC89748 protein (MGC89748), mRNA gb|BC077664.1| Xenopus tropicalis MGC89748 protein, mRNA (cDNA clone MGC:89748 IMAGE:7027295), complete cds Length = 684 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 223 aagaacaacacccaggtgcttatcaactgccggaacaacaagaagttgct 272 ||||||||||| || || || ||||||||| |||| ||||| |||||||| Sbjct: 181 aagaacaacacacaagttctgatcaactgcaggaataacaaaaagttgct 230
>gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome 9, complete sequence Length = 176541 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 118081 ggggaagaaggaggaggaggag 118060
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 171018 ggggaagaaggaggaggaggag 171039
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 48844 ggggaagaaggaggaggaggag 48865
>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence Length = 205900 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 12857 ggggaagaaggaggaggaggag 12878
>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence Length = 136592 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 8777 ggggaagaaggaggaggaggag 8756
>gb|AC123550.5| Mus musculus BAC clone RP24-289C13 from chromosome 7, complete sequence Length = 169206 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggagga 182 |||||||||||||||||||||| Sbjct: 108117 aggggaagaaggaggaggagga 108138
>gb|AC126547.4| Mus musculus BAC clone RP24-180F1 from chromosome 13, complete sequence Length = 181823 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggagga 182 |||||||||||||||||||||| Sbjct: 142434 aggggaagaaggaggaggagga 142455
>gb|AC122338.2| Mus musculus BAC clone RP23-353I2 from chromosome 6, complete sequence Length = 181128 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 180022 ggggaagaaggaggaggaggag 180043
>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence Length = 182686 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 49822 ggggaagaaggaggaggaggag 49801
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete sequence Length = 214865 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 176849 ggggaagaaggaggaggaggag 176828
>gb|AC152819.6| Mus musculus BAC clone RP24-572P24 from chromosome 10, complete sequence Length = 185665 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 45181 ggggaagaaggaggaggaggag 45202
>emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chromosome 9, complete sequence Length = 247670 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 aggggaagaaggaggaggagga 182 |||||||||||||||||||||| Sbjct: 41904 aggggaagaaggaggaggagga 41925
>dbj|AK043632.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830014C24 product:cytosolic 5' nucleotidase, type 1A, full insert sequence Length = 1186 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 580 ggggaagaaggaggaggaggag 559
>emb|CR663568.2|CNS0FAZA Tetraodon nigroviridis full-length cDNA Length = 945 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 ggaagaaggaggaggaggagtt 185 |||||||||||||||||||||| Sbjct: 244 ggaagaaggaggaggaggagtt 265
>gb|AC154108.3| Mus musculus BAC clone RP23-74K24 from chromosome 7, complete sequence Length = 222515 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 aggggaagaaggaggaggagga 182 |||||||||||||||||||||| Sbjct: 164873 aggggaagaaggaggaggagga 164852
>gb|AC154217.2| Mus musculus BAC clone RP24-357L19 from chromosome 17, complete sequence Length = 183535 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 137551 ggggaagaaggaggaggaggag 137530
>emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0071D01, complete sequence Length = 78794 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 gccgtcgcgtccatggcggagg 145 |||||||||||||||||||||| Sbjct: 78707 gccgtcgcgtccatggcggagg 78728
>gb|AC153606.3| Mus musculus 6 BAC RP23-252F12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203410 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 117664 ggggaagaaggaggaggaggag 117643
>emb|AL627346.14| Mouse DNA sequence from clone RP23-313I9 on chromosome 11, complete sequence Length = 100292 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 51031 ggggaagaaggaggaggaggag 51052
>emb|CR759767.6| Zebrafish DNA sequence from clone DKEY-191H14 in linkage group 5, complete sequence Length = 19065 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 15914 ggggaagaaggaggaggaggag 15935
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 80310 ggggaagaaggaggaggaggag 80331
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 33931 ggggaagaaggaggaggaggag 33952
>dbj|AK121222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H22, full insert sequence Length = 623 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 15 ggggaagaaggaggaggaggag 36
>emb|AL928985.24| Mouse DNA sequence from clone RP23-477P11 on chromosome 2, complete sequence Length = 83772 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggggaagaaggaggaggaggag 183 |||||||||||||||||||||| Sbjct: 59980 ggggaagaaggaggaggaggag 59959 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gggaagaaggaggaggagga 182 |||||||||||||||||||| Sbjct: 59959 gggaagaaggaggaggagga 59940
>dbj|AK059410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C06, full insert sequence Length = 1133 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 gccgtcgcgtccatggcggagg 145 |||||||||||||||||||||| Sbjct: 59 gccgtcgcgtccatggcggagg 38
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 ggaagaaggaggaggaggagtt 185 |||||||||||||||||||||| Sbjct: 180943 ggaagaaggaggaggaggagtt 180964 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 88,292,776 Number of extensions: 5242071 Number of successful extensions: 468456 Number of sequences better than 10.0: 2122 Number of HSP's gapped: 468412 Number of HSP's successfully gapped: 2331 Length of query: 627 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 605 Effective length of database: 18,508,616,841 Effective search space: 11197713188805 Effective search space used: 11197713188805 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)