ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93n20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064926:Os02g0557600 | 943 | 0.0 | 2 | AK104939:Os01g0314300 | 58 | 2e-08 | 3 | AK073419:Os01g0314300 | 58 | 2e-08 | 4 | AK120756:Os04g0471400 | 33 | 0.85 | 5 | AK100883:Os04g0471400 | 33 | 0.85 | 6 | AK099564:Os04g0471400 | 33 | 0.85 | 7 | AK121027:Os07g0655500 | 33 | 1.1 | 8 | AK070619:Os01g0195500 | 32 | 1.9 | 9 | Os12g0569300:Os12g0569300 | 31 | 4.2 | 10 | AK110050: | 31 | 4.2 | 11 | Os03g0808000:Os03g0808000 | 30 | 5.5 | 12 | AK066765:Os01g0158900 | 30 | 5.5 | 13 | Os04g0388600:Os04g0388600 | 30 | 9.4 | 14 | AK121241:Os01g0958400 | 30 | 9.4 | 15 | AK106256:Os01g0958400 | 30 | 9.4 | 16 | AK066987:Os01g0958400 | 30 | 9.4 |
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>AK064926:Os02g0557600 | Length = 603 Score = 943 bits (2437), Expect = 0.0 Identities = 476/603 (78%), Positives = 514/603 (85%), Gaps = 7/603 (1%) Frame = +3 Query: 201 MFKKNVDAKALQRLSGADKKKLRRTAKQRFPQASDDDLDVILPPKVEITVAKYPSRTLVY 380 MFKK+VD KALQRLSGADKKKLRRTAK+RFPQASD DLD ILPPKVE+TVAKYP+R LVY Sbjct: 1 MFKKHVDVKALQRLSGADKKKLRRTAKERFPQASDADLDAILPPKVEVTVAKYPNRVLVY 60 Query: 381 GIEGGFPMLFDIDGRGHELFPTVYALWNVPHLLPAFTLKGGEVSHFILGGADLMFPGISV 560 GIEG FPMLFDIDGRGHELFPTVYALW VP LLPAFTLKGGEVS FILGGADLMFPGIS+ Sbjct: 61 GIEGEFPMLFDIDGRGHELFPTVYALWKVPDLLPAFTLKGGEVSRFILGGADLMFPGISI 120 Query: 561 PPEGLPSFQAGQPWSVKVPGNHAPIAVGTTTVSNTEALKAGLRGKALRIAHYYKDLLWAS 740 PPEGLPSFQ GQPWSVKVPGN APIAVG TT+S+ EALKAGLRGKALRI HY+KD LW S Sbjct: 121 PPEGLPSFQPGQPWSVKVPGNPAPIAVGATTMSSNEALKAGLRGKALRITHYFKDSLWDS 180 Query: 741 ADGRYVPNEGFYDDMVIEDPNFASASQHIDSSEDPSEAKQD------KAAVDVSECRTED 902 ADGRYVPNEGFY+D+V+ED N+AS SQ DSSED E D +AAVDVSE T D Sbjct: 181 ADGRYVPNEGFYEDIVVEDRNYASPSQPADSSEDHVEGMHDSTIEGEEAAVDVSESHTTD 240 Query: 903 LAINSETIEDLTAGVSELNLPQXXXXXXXXXXX-HQHLSTEEIDYLLDICLLQALHTSVK 1079 I+ E IEDLTAGVSE+ LP+ HQ+LSTEEID LLD CLLQALHTSVK Sbjct: 241 HDIHVEAIEDLTAGVSEVKLPEDNATEEPTEEREHQNLSTEEIDSLLDKCLLQALHTSVK 300 Query: 1080 DKDLPIPGSILWSNHILPCRPPGVTLDIXXXXXXXXXXXXXXXXXXGLISTKEDKHKKEV 1259 DKDLPIPGS LWSNHILPCRP GVTLDI GLIS+KEDKHKKEV Sbjct: 301 DKDLPIPGSTLWSNHILPCRPTGVTLDIKKSSHKKLSKWLQSKSSAGLISSKEDKHKKEV 360 Query: 1260 MLIGINRKHPDYTAFKHQKKVQEPVEQHDNIVGEGSSTKQLEVDEIYKSSSHVNPIFLAV 1439 ML+ INR HPDY AFK +K+VQEPV QHDN+V EGSSTKQLEV E YK SSHVNPIF+AV Sbjct: 361 MLLRINRGHPDYMAFKPEKRVQEPVVQHDNVVAEGSSTKQLEVAETYKPSSHVNPIFMAV 420 Query: 1440 DADTGKYYSASEVFDVVFRYVEKENLVKQTDKAKVILDATLCDALYKGAVKKGSAYPSEI 1619 ADT KYYSASE D+VFRYVEKENLVKQTDKAKV+LD LCDALYKGA+KKGSAYP+EI Sbjct: 421 GADTSKYYSASEASDIVFRYVEKENLVKQTDKAKVVLDVALCDALYKGAIKKGSAYPTEI 480 Query: 1620 HKKDLGSTFINRMQIHHRVARGNEVVIRKGAIRTVQIMTERRQGNKKMTRVSGLECFLLD 1799 HK+DLGSTF+NRMQIHHRVARGNEVVIRKGAIRT+QIMTERRQGNKKMTR+SGLECFL+D Sbjct: 481 HKRDLGSTFLNRMQIHHRVARGNEVVIRKGAIRTIQIMTERRQGNKKMTRLSGLECFLMD 540 Query: 1800 ADSLASELQKKFACSTTTAELPGKKGQHEVLIQGGVIENLAKHLVDHHGVPKRYIEVYDK 1979 DSLASELQKKFACSTTTAELPGKKGQHEVL+QGGVI++LAKHLVDH+GVPKR+IEV DK Sbjct: 541 PDSLASELQKKFACSTTTAELPGKKGQHEVLVQGGVIDDLAKHLVDHYGVPKRFIEVLDK 600 Query: 1980 TKK 1988 TK+ Sbjct: 601 TKR 603
>AK104939:Os01g0314300 | Length = 181 Score = 58.2 bits (139), Expect = 2e-08 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +3 Query: 201 MFKKNV--DAKALQRLSGADKKKLRRTAKQRFPQASDDDLDVILPPKVEITVAKYPSRTL 374 MFKK D A ++ + ++K+R++ +P + LD +LP K + V K + L Sbjct: 1 MFKKFSFEDISAQNQVKASVQRKIRQSIADEYP-GLEPLLDDLLPKKSPMIVVKCQNH-L 58 Query: 375 VYGIEGGFPMLFDIDGRGHELFPTVYALWNVPHLLPAFTLKGGEVSHFILGGADLMFPGI 554 + P+ F+I R PT+ L P ++ F + G + F+L GA++M PG+ Sbjct: 59 NLVVVNNVPLFFNI--RDGPYMPTLRLLHQYPDIMKKFQVDRGAIK-FVLSGANIMCPGL 115 Query: 555 SVPPEGLP-SFQAGQPWSVKVPGNHAPIAVGTTTVSNTEALKAGLRGKALRIAHYYKDLL 731 + P L + P ++ G +A+G T +S + +K +G + HY D L Sbjct: 116 TSPGGSLDVEVEEETPVAIMAEGKQHALAIGYTKMS-AKDIKTINKGIGVDNMHYLNDGL 174 Query: 732 W 734 W Sbjct: 175 W 175
>AK073419:Os01g0314300 | Length = 181 Score = 58.2 bits (139), Expect = 2e-08 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +3 Query: 201 MFKKNV--DAKALQRLSGADKKKLRRTAKQRFPQASDDDLDVILPPKVEITVAKYPSRTL 374 MFKK D A ++ + ++K+R++ +P + LD +LP K + V K + L Sbjct: 1 MFKKFSFEDISAQNQVKASVQRKIRQSIADEYP-GLEPLLDDLLPKKSPMIVVKCQNH-L 58 Query: 375 VYGIEGGFPMLFDIDGRGHELFPTVYALWNVPHLLPAFTLKGGEVSHFILGGADLMFPGI 554 + P+ F+I R PT+ L P ++ F + G + F+L GA++M PG+ Sbjct: 59 NLVVVNNVPLFFNI--RDGPYMPTLRLLHQYPDIMKKFQVDRGAIK-FVLSGANIMCPGL 115 Query: 555 SVPPEGLP-SFQAGQPWSVKVPGNHAPIAVGTTTVSNTEALKAGLRGKALRIAHYYKDLL 731 + P L + P ++ G +A+G T +S + +K +G + HY D L Sbjct: 116 TSPGGSLDVEVEEETPVAIMAEGKQHALAIGYTKMS-AKDIKTINKGIGVDNMHYLNDGL 174 Query: 732 W 734 W Sbjct: 175 W 175
>AK120756:Os04g0471400 | Length = 1203 Score = 33.1 bits (74), Expect = 0.85 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +3 Query: 816 SQHIDSSEDPSEAKQDKAAVDVSECRTEDLAINSETIED 932 S+++DSS +PSE K S RTE++A NS T+ D Sbjct: 165 SKNLDSSREPSEKKCKLVVKVGSLTRTEEVASNSSTVSD 203
>AK100883:Os04g0471400 | Length = 1239 Score = 33.1 bits (74), Expect = 0.85 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +3 Query: 816 SQHIDSSEDPSEAKQDKAAVDVSECRTEDLAINSETIED 932 S+++DSS +PSE K S RTE++A NS T+ D Sbjct: 201 SKNLDSSREPSEKKCKLVVKVGSLTRTEEVASNSSTVSD 239
>AK099564:Os04g0471400 | Length = 1071 Score = 33.1 bits (74), Expect = 0.85 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +3 Query: 816 SQHIDSSEDPSEAKQDKAAVDVSECRTEDLAINSETIED 932 S+++DSS +PSE K S RTE++A NS T+ D Sbjct: 33 SKNLDSSREPSEKKCKLVVKVGSLTRTEEVASNSSTVSD 71
>AK121027:Os07g0655500 | Length = 1447 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = +3 Query: 1431 LAVDADTGKYYSASEVFDVVFRYVEKE-NLVKQTDKAKVILDATLCDALYKGAVKKGSAY 1607 LA++ D K A EV D++ ++EKE NL K+ D ++ C KG V G+A+ Sbjct: 861 LALECD--KQGIAGEVMDIIIEHLEKESNLYKRVDLFFLVDSIIQCCRNQKGGV--GNAF 916 Query: 1608 PSEI 1619 PS I Sbjct: 917 PSLI 920
>AK070619:Os01g0195500 | Length = 258 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +3 Query: 1743 RQGNKKMTRVSGLECFLLDADSLASELQKKFACSTTTAELPGKKGQHEVLIQGGVIENLA 1922 R K +T V GLE F + + +L KKFA + + P +K Q +V QG + ++ Sbjct: 174 RNKRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDV--QGDISYDIV 231 Query: 1923 KHLVD 1937 + + D Sbjct: 232 EFITD 236
>Os12g0569300:Os12g0569300 | Length = 233 Score = 30.8 bits (68), Expect = 4.2 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -3 Query: 152 ARIDGVGGGLRTRARPLLLWFARRASAALSGGLVGFVREETGS 24 AR+DG G GL + P W R + GG G VR ETG+ Sbjct: 55 ARLDGGGRGLVSYDFPASFWAGRVVARTGCGGGGGLVRCETGN 97
>AK110050: | Length = 910 Score = 30.8 bits (68), Expect = 4.2 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Frame = +3 Query: 21 TRARLLPDKTNEATAQGSGGATREPEEKGARPRPQ-------PAADAVDSSSPCNCKLGI 179 T +RLL +A+ G+ E EE+ + P P+ A+ AV + C L Sbjct: 230 TESRLLARSKRQASGPGTDAEDAEDEEEASAPTPKWTPLWIVTASGAV--AGAAQCFLSA 287 Query: 180 LFDNPETMFKKNVDAKALQRLSGA 251 DN + ++NV A GA Sbjct: 288 PLDNVRYIMQRNVSASDSHARGGA 311
>Os03g0808000:Os03g0808000 | Length = 444 Score = 30.4 bits (67), Expect = 5.5 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Frame = +3 Query: 1362 GSSTKQLEVDEIYKSSSHVNPIFLAVDADT---GKYYSASEVFDVVFRYVEKENLVKQTD 1532 G + EV +I+ + H+ T G Y+ D+VF +N+V + Sbjct: 296 GDDNSRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAK----DIVF-----QNMVMNSV 346 Query: 1533 KAKVILDATLCDALYKGAVKKGSAYP-SEIHKKDLGSTFINRMQI 1664 K +I+D CD+ K ++GSA S + K++ T I++ I Sbjct: 347 KNPIIIDQNYCDSAKKCETQEGSAVEISNVVFKNIAGTTISKSAI 391
>AK066765:Os01g0158900 | Length = 909 Score = 30.4 bits (67), Expect = 5.5 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Frame = +3 Query: 57 ATAQGSGGATREPEEKGA----RPRPQPAADAVDSSSPCN 164 A A GS ++R+P A RP P PAA A + SP N Sbjct: 7 AAASGSASSSRKPVPVAAAAARRPAPSPAAAAAPAPSPSN 46
>Os04g0388600:Os04g0388600 | Length = 148 Score = 29.6 bits (65), Expect = 9.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 81 ATREPEEKGARPRPQPAADAVDSSSPCN 164 ++ +P E GA P P PAA A S+ C+ Sbjct: 17 SSSDPPEPGAPPGPPPAASAASESAECS 44
>AK121241:Os01g0958400 | Length = 415 Score = 29.6 bits (65), Expect = 9.4 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +3 Query: 156 PCNCKLGILFDNPETMFKKNVDAKALQRLSGADKKKLRRTAKQRFPQASDDDLD 317 P K+ F PE K ++ L+ +K K AK + P A DDLD Sbjct: 120 PKGKKIKQKFPTPEARLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLD 173
>AK106256:Os01g0958400 | Length = 394 Score = 29.6 bits (65), Expect = 9.4 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +3 Query: 156 PCNCKLGILFDNPETMFKKNVDAKALQRLSGADKKKLRRTAKQRFPQASDDDLD 317 P K+ F PE K ++ L+ +K K AK + P A DDLD Sbjct: 120 PKGKKIKQKFPTPEARLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLD 173
>AK066987:Os01g0958400 | Length = 417 Score = 29.6 bits (65), Expect = 9.4 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +3 Query: 156 PCNCKLGILFDNPETMFKKNVDAKALQRLSGADKKKLRRTAKQRFPQASDDDLD 317 P K+ F PE K ++ L+ +K K AK + P A DDLD Sbjct: 120 PKGKKIKQKFPTPEARLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLD 173 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 66,472,156 Number of extensions: 1574518 Number of successful extensions: 5060 Number of sequences better than 10.0: 16 Number of HSP's gapped: 5050 Number of HSP's successfully gapped: 16 Length of query: 750 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 642 Effective length of database: 11,075,427 Effective search space: 7110424134 Effective search space used: 7110424134 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
