Clone Information

BLAST Search Result

Clone Name	FLbaf93n20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001053675.1\| Oryza sativa (japonica cultivar-group) Os02g...	809	0.0
2	dbj\|AK064926.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	801	0.0
3	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	331	6e-87
4	dbj\|AP005808.3\| Oryza sativa (japonica cultivar-group) genomic D...	331	6e-87
5	dbj\|AK227085.1\| Arabidopsis thaliana mRNA for hypothetical prote...	46	0.55
6	ref\|NM_105804.3\| Arabidopsis thaliana translation initiation fac...	46	0.55
7	gb\|AY099613.1\| Arabidopsis thaliana unknown protein (At1g71350) ...	46	0.55
8	gb\|BT006330.1\| Arabidopsis thaliana At1g71350 mRNA, complete cds	46	0.55
9	gb\|AC016162.5\|AC016162 Arabidopsis thaliana chromosome 1 BAC F3I...	46	0.55
10	gb\|AC016163.6\|AC016163 Arabidopsis thaliana chromosome 1 BAC F26...	46	0.55
11	gb\|AC002381.1\| Homo sapiens BAC clone CTB-20D2 from 7, complete ...	44	2.2
12	gb\|AC147974.2\| Pan troglodytes BAC clone RP43-67J16 from 7, comp...	44	2.2
13	gb\|AC152057.11\| Medicago truncatula clone mth2-25a12, complete s...	44	2.2
14	gb\|AC132386.3\| Mus musculus BAC clone RP23-438O22 from chromosom...	44	2.2
15	dbj\|AK160425.1\| Mus musculus adult male testis cDNA, RIKEN full-...	44	2.2
16	dbj\|AK076930.1\| Mus musculus adult male testis cDNA, RIKEN full-...	44	2.2
17	gb\|AC090625.5\| Homo sapiens chromosome 11, clone RP4-683L5, comp...	44	2.2
18	gb\|AC125319.5\| Mus musculus BAC clone RP23-472L3 from 5, complet...	44	2.2
19	ref\|XM_001153103.1\| PREDICTED: Pan troglodytes regeneration asso...	42	8.6
20	ref\|XM_508370.2\| PREDICTED: Pan troglodytes regeneration associa...	42	8.6
21	ref\|XM_001152976.1\| PREDICTED: Pan troglodytes regeneration asso...	42	8.6
22	emb\|CT573213.2\| Frankia alni str. ACN14A chromosome, complete se...	42	8.6
23	ref\|XM_361619.1\| Magnaporthe grisea 70-15 hypothetical protein (...	42	8.6
24	gb\|AY314119.1\| HIV-1 from USA isolate WC14P5 envelope glycoprote...	42	8.6
25	gb\|AC150372.15\| Medicago truncatula clone mth2-151k24, complete ...	42	8.6
26	gb\|AF002993.1\|HSAF002993 Homo sapiens cosmid from 7q22, complete...	42	8.6
27	gb\|AE000516.2\| Mycobacterium tuberculosis CDC1551, complete genome	42	8.6
28	gb\|AC145821.16\| Papio anubis clone rp41-103i16, complete sequence	42	8.6
29	ref\|XM_544753.2\| PREDICTED: Canis familiaris similar to CG6232-P...	42	8.6
30	gb\|AC129313.4\| Mus musculus BAC clone RP23-342K4 from chromosome...	42	8.6
31	gb\|AC012588.14\| Homo sapiens chromosome 18, clone RP11-17A19, co...	42	8.6
32	gb\|AF248955.1\| Homo sapiens arsenite-resistant protein ASR2 (ASR...	42	8.6
33	gb\|AC090337.5\| Homo sapiens chromosome 18, clone RP11-674P19, co...	42	8.6
34	dbj\|BA000036.3\| Corynebacterium glutamicum ATCC 13032 DNA, compl...	42	8.6
35	gb\|AC011895.4\| Homo sapiens BAC clone RP11-126L15 from 7, comple...	42	8.6
36	emb\|CR626927.1\| Bacteroides fragilis NCTC 9343, complete genome	42	8.6
37	emb\|BX927151.1\| Corynebacterium glutamicum ATCC 13032, IS finger...	42	8.6
38	emb\|BX842583.1\| Mycobacterium tuberculosis H37Rv complete genome...	42	8.6
39	emb\|BX248346.1\| Mycobacterium bovis subsp. bovis AF2122/97 compl...	42	8.6
40	emb\|AL096723.1\|HSM800627 Homo sapiens mRNA; cDNA DKFZp564H2023 (...	42	8.6
41	gb\|AF312032.1\|AF312032 Homo sapiens acetylcholinesterase (ACHE) ...	42	8.6
42	emb\|CR861036.1\| Pongo pygmaeus mRNA; cDNA DKFZp470E1612 (from cl...	42	8.6
43	gb\|AC023510.16\|AC023510 Homo sapiens 12 BAC RP11-713N11 (Roswell...	42	8.6
44	gb\|BC109117.1\| Homo sapiens ARS2 protein, mRNA (cDNA clone MGC:1...	42	8.6
45	gb\|BC069249.1\| Homo sapiens ARS2 protein, mRNA (cDNA clone IMAGE...	42	8.6
46	gb\|AF025405.1\|AF025405 Mycobacterium tuberculosis PGRS-like seco...	42	8.6
47	gb\|AF025400.1\|AF025400 Mycobacterium tuberculosis PGRS-like seco...	42	8.6
48	gb\|BC109116.1\| Homo sapiens cDNA clone IMAGE:40035608	42	8.6
49	ref\|NM_182800.2\| Homo sapiens ARS2 protein (ARS2), transcript va...	42	8.6
50	ref\|NM_015908.4\| Homo sapiens ARS2 protein (ARS2), transcript va...	42	8.6

>ref|NM_001053675.1| Oryza sativa (japonica cultivar-group) Os02g0557600 (Os02g0557600)
            mRNA, complete cds
          Length = 2331
 Score =  809 bits (408), Expect = 0.0
 Identities = 843/988 (85%)
 Strand = Plus / Plus

                                                                        
Query: 998  ggaacatcaacatttgtctactgaagaaattgactatctcttggatatatgccttctgca 1057
            |||||||||  |||||||||| ||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 918  ggaacatcagaatttgtctacggaagaaattgactctcttttagataaatgtcttctgca 977

                                                                        
Query: 1058 agcattacacacgagcgtaaaagataaagacctcccaatcccaggaagtatattgtggtc 1117
            ||| ||||||||||| ||||||||||||||||| || || || ||||||| |||||||||
Sbjct: 978  agctttacacacgagtgtaaaagataaagaccttcctattcctggaagtacattgtggtc 1037

                                                                        
Query: 1118 aaatcacatactcccatgcagacctccaggtgttacccttgatattaagaagtcatcaca 1177
            ||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 1038 aaatcacatactcccctgcagacctacaggtgttactctggatattaagaagtcatcaca 1097

                                                                        
Query: 1178 taaaaagctatccaagtggctgcagtcaaaatcttcttctggccttatctcaacaaaaga 1237
             |||||||||||||||||| |||| |||||||||||  |||||||||| ||| |||||||
Sbjct: 1098 caaaaagctatccaagtggttgcaatcaaaatcttccgctggccttatttcatcaaaaga 1157

                                                                        
Query: 1238 ggacaagcataaaaaagaagtcatgttgataggtattaatcgcaaacatccagactacac 1297
             |||||||||||||| |||||||||||| |  |||| |||||    |||||||| |||| 
Sbjct: 1158 agacaagcataaaaaggaagtcatgttgcttcgtatcaatcgtgggcatccagattacat 1217

                                                                        
Query: 1298 ggccttcaaacatcaaaagaaggtacaggagccagttgaacagcatgataacattgttgg 1357
            |||||| ||||   |||||| |||||||||||| |||| ||||||||||||  |||||| 
Sbjct: 1218 ggcctttaaaccagaaaagagggtacaggagcctgttgtacagcatgataatgttgttgc 1277

                                                                        
Query: 1358 cgaaggcagcagtacaaagcaactggaagtggatgaaatttataagtcaagttcgcatgt 1417
             ||||| ||||| || |||||||||||||| |  |||| ||||||| |||| || |||||
Sbjct: 1278 tgaaggtagcagcacgaagcaactggaagtagcagaaacttataagccaagctctcatgt 1337

                                                                        
Query: 1418 caaccccatatttttggctgttgacgctgacacagggaagtattacagtgcatcagaggt 1477
             |||||||||||| |||||||||  || |||||  | ||||| || ||||||||||||| 
Sbjct: 1338 taaccccatatttatggctgttggagcggacacgagcaagtactatagtgcatcagaggc 1397

                                                                        
Query: 1478 gtttgatgtggttttcaggtacgtggagaaggaaaatttggtcaagcaaacagataaggc 1537
             | |||  | || ||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 1398 atctgacatagtcttcaggtacgttgaaaaggaaaatttggttaaacaaacagacaaggc 1457

                                                                        
Query: 1538 caaagtaattctggatgctacattatgtgatgctctgtacaaaggagctgtcaagaaggg 1597
            ||||||| || |||||| | ||||||| || ||||| |||||||||||  |||| |||||
Sbjct: 1458 caaagtagttttggatgttgcattatgcgacgctctctacaaaggagccatcaaaaaggg 1517

                                                                        
Query: 1598 ttcagcatacccaagtgagatacacaagaaggatttagggtcaacatttattaaccgtat 1657
            ||||||||||||||  ||||| ||||||| |||  | |||||||||||| | ||||| ||
Sbjct: 1518 ttcagcatacccaaccgagatccacaagagggacctggggtcaacatttttaaaccgaat 1577

                                                                        
Query: 1658 gcaaattcatcatagagtagctagaggaaatgaggtggtcattcgcaagggtgccatacg 1717
            ||| ||||| ||||||||||| ||||| || |||||||||||||||||||| ||||||||
Sbjct: 1578 gcagattcaccatagagtagcaagagggaacgaggtggtcattcgcaagggcgccatacg 1637

                                                                        
Query: 1718 aactgttcaaatcatgacagaaagaagacaagggaacaagaagatgacccgagtctctgg 1777
            |||  |||| ||||||||||| ||||| ||||| |||||||||||||||||  | |||||
Sbjct: 1638 aaccattcagatcatgacagagagaaggcaaggaaacaagaagatgacccggctatctgg 1697

                                                                        
Query: 1778 attggaatgctttttgctggatgccgactccttggcttctgaactacaaaagaaatttgc 1837
            |||||||||||| ||  ||||| | ||||| || |||||||| || || ||||| |||||
Sbjct: 1698 attggaatgcttcttaatggatcctgactcgttagcttctgagctgcagaagaagtttgc 1757

                                                                        
Query: 1838 ttgcagcaccaccacagctgagcttcccggtaaaaaggggcaacatgaggtcttgattca 1897
            ||||||||||||||||||||||||||| ||||| || |||||||| ||||||||| ||||
Sbjct: 1758 ttgcagcaccaccacagctgagcttccaggtaagaaagggcaacacgaggtcttggttca 1817

                                                                        
Query: 1898 aggcggagtcattgaaaaccttgcaaagcacctcgttgaccatcatggtgttcccaagag 1957
            ||| |||||||| ||  |||||||||||||||| ||||| ||| | |||||||| |||||
Sbjct: 1818 aggtggagtcatcgatgaccttgcaaagcaccttgttgatcattacggtgttccgaagag 1877

                                        
Query: 1958 atatattgaggtttatgacaaaacaaag 1985
             | ||||||||||  |||||||||||||
Sbjct: 1878 gtttattgaggttcttgacaaaacaaag 1905



 Score =  597 bits (301), Expect = e-167
 Identities = 535/613 (87%)
 Strand = Plus / Plus

                                                                       
Query: 199 ccatgttcaagaagaatgttgatgcaaaagctctacaacgtttgtcaggcgctgacaaaa 258
           |||||||||||||| ||||||||| ||| |||||||| |||||||| || ||||||||||
Sbjct: 98  ccatgttcaagaagcatgttgatgtaaaggctctacagcgtttgtcgggagctgacaaaa 157

                                                                       
Query: 259 agaagctgagaagaaccgccaagcaaaggtttccgcaagcatctgatgatgatctggatg 318
           ||||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||||
Sbjct: 158 agaagctcagaagaactgccaaggaaaggttcccacaagcatctgatgctgaccttgatg 217

                                                                       
Query: 319 tcattcttcctccaaaggttgagataacagtcgctaagtacccaagccggactcttgttt 378
            ||| |||||||| ||||||||| ||||||| |||||||||||||   ||  |||||| |
Sbjct: 218 ccatccttcctcccaaggttgaggtaacagttgctaagtacccaaatagggttcttgtat 277

                                                                       
Query: 379 atggcatagagggtggattcccaatgctattcgacattgatggaagaggccatgagctgt 438
           ||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 278 atggcatagagggagagttcccaatgcttttcgacattgatggaagaggccatgagctgt 337

                                                                       
Query: 439 ttccaacagtttatgcactctggaacgttcctcatctgttgccagcttttacacttaagg 498
           ||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||
Sbjct: 338 ttccaacagtttatgcactctggaaggttcccgatctgttgcctgcttttacacttaagg 397

                                                                       
Query: 499 gtggtgaagtttcacacttcattcttggtggcgctgatcttatgtttcctggtatcagcg 558
           |||||||||| |||| |||||| || || || || ||||| |||||||||||||| ||| 
Sbjct: 398 gtggtgaagtctcacgcttcatactggggggtgccgatctgatgtttcctggtattagca 457

                                                                       
Query: 559 tacccccagaaggattaccttctttccaagctggccagccatggtcagttaaagtccctg 618
           |||||||||||||  | ||||| || ||| ||||||||||||||||||| || || ||||
Sbjct: 458 tacccccagaagggcttccttcctttcaacctggccagccatggtcagtaaaggttcctg 517

                                                                       
Query: 619 gtaaccatgctccaattgctgttgggacaacaactgtgagcaatactgaagcactaaagg 678
           |||| | ||||||||||||||||||| | |||||| |||||| || ||||||  ||||||
Sbjct: 518 gtaatcctgctccaattgctgttggggccacaactatgagcagtaatgaagccttaaagg 577

                                                                       
Query: 679 caggattacgtggcaaggctttgcggattgcacattactataaagatttgttatgggctt 738
           |||| |||||||||||||||||||||||| | || |||| ||| ||||  ||||||| ||
Sbjct: 578 cagggttacgtggcaaggctttgcggattactcactactttaaggattcattatgggatt 637

                                                                       
Query: 739 ctgcggatggtcgttatgtcccaaatgaaggattttatgatgacatggttattgaagatc 798
           |||| |||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||||
Sbjct: 638 ctgctgatggtcgctatgttccaaatgaaggattttatgaggacattgttgttgaagatc 697

                        
Query: 799 ctaattttgcttc 811
            ||||| ||||||
Sbjct: 698 gtaattatgcttc 710

to top

>dbj|AK064926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N18, full
            insert sequence
          Length = 2333

 Score =  801 bits (404), Expect = 0.0
 Identities = 842/988 (85%)
 Strand = Plus / Plus

                                                                        
Query: 998  ggaacatcaacatttgtctactgaagaaattgactatctcttggatatatgccttctgca 1057
            |||||||||  |||||||||| ||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 920  ggaacatcagaatttgtctacggaagaaattgactctcttttagataaatgtcttctgca 979

                                                                        
Query: 1058 agcattacacacgagcgtaaaagataaagacctcccaatcccaggaagtatattgtggtc 1117
            ||| ||||||||||| ||||||||||||||||| || || || ||||||| |||||||||
Sbjct: 980  agctttacacacgagtgtaaaagataaagaccttcctattcctggaagtacattgtggtc 1039

                                                                        
Query: 1118 aaatcacatactcccatgcagacctccaggtgttacccttgatattaagaagtcatcaca 1177
            ||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 1040 aaatcacatactcccctgcagacctacaggtgttactctggatattaagaagtcatcaca 1099

                                                                        
Query: 1178 taaaaagctatccaagtggctgcagtcaaaatcttcttctggccttatctcaacaaaaga 1237
             |||||||||||||||||| |||| |||||||||||  |||||||||| ||| |||||||
Sbjct: 1100 caaaaagctatccaagtggttgcaatcaaaatcttccgctggccttatttcatcaaaaga 1159

                                                                        
Query: 1238 ggacaagcataaaaaagaagtcatgttgataggtattaatcgcaaacatccagactacac 1297
             |||||||||||||| |||||||||||| |  |||| |||||    |||||||| |||| 
Sbjct: 1160 agacaagcataaaaaggaagtcatgttgcttcgtatcaatcgtgggcatccagattacat 1219

                                                                        
Query: 1298 ggccttcaaacatcaaaagaaggtacaggagccagttgaacagcatgataacattgttgg 1357
            |||||| ||||   |||||| |||||||||||| |||| ||||||||||||  |||||| 
Sbjct: 1220 ggcctttaaaccagaaaagagggtacaggagcctgttgtacagcatgataatgttgttgc 1279

                                                                        
Query: 1358 cgaaggcagcagtacaaagcaactggaagtggatgaaatttataagtcaagttcgcatgt 1417
             ||||| ||||| || |||||||||||||| |  |||| ||||||| |||| || |||||
Sbjct: 1280 tgaaggtagcagcacgaagcaactggaagtagcagaaacttataagccaagctctcatgt 1339

                                                                        
Query: 1418 caaccccatatttttggctgttgacgctgacacagggaagtattacagtgcatcagaggt 1477
             |||||||||||| |||||||||  || |||||  | ||||| || ||||||||||||| 
Sbjct: 1340 taaccccatatttatggctgttggagcggacacgagcaagtactatagtgcatcagaggc 1399

                                                                        
Query: 1478 gtttgatgtggttttcaggtacgtggagaaggaaaatttggtcaagcaaacagataaggc 1537
             | |||  | || ||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 1400 atctgacatagtcttcaggtacgttgaaaaggaaaatttggttaaacaaacagacaaggc 1459

                                                                        
Query: 1538 caaagtaattctggatgctacattatgtgatgctctgtacaaaggagctgtcaagaaggg 1597
            ||||||| || |||||| | ||||||| || ||||| |||||||||||  |||| |||||
Sbjct: 1460 caaagtagttttggatgttgcattatgcgacgctctctacaaaggagccatcaaaaaggg 1519

                                                                        
Query: 1598 ttcagcatacccaagtgagatacacaagaaggatttagggtcaacatttattaaccgtat 1657
            ||||||||||||||  ||||| ||||||| |||  | |||||||||||| | ||||| ||
Sbjct: 1520 ttcagcatacccaaccgagatccacaagagggacctggggtcaacatttttaaaccgaat 1579

                                                                        
Query: 1658 gcaaattcatcatagagtagctagaggaaatgaggtggtcattcgcaagggtgccatacg 1717
            ||| ||||| ||||||||||| ||||| |  |||||||||||||||||||| ||||||||
Sbjct: 1580 gcagattcaccatagagtagcaagagggagcgaggtggtcattcgcaagggcgccatacg 1639

                                                                        
Query: 1718 aactgttcaaatcatgacagaaagaagacaagggaacaagaagatgacccgagtctctgg 1777
            |||  |||| ||||||||||| ||||| ||||| |||||||||||||||||  | |||||
Sbjct: 1640 aaccattcagatcatgacagagagaaggcaaggaaacaagaagatgacccggctatctgg 1699

                                                                        
Query: 1778 attggaatgctttttgctggatgccgactccttggcttctgaactacaaaagaaatttgc 1837
            |||||||||||| ||  ||||| | ||||| || |||||||| || || ||||| |||||
Sbjct: 1700 attggaatgcttcttaatggatcctgactcgttagcttctgagctgcagaagaagtttgc 1759

                                                                        
Query: 1838 ttgcagcaccaccacagctgagcttcccggtaaaaaggggcaacatgaggtcttgattca 1897
            ||||||||||||||||||||||||||| ||||| || |||||||| ||||||||| ||||
Sbjct: 1760 ttgcagcaccaccacagctgagcttccaggtaagaaagggcaacacgaggtcttggttca 1819

                                                                        
Query: 1898 aggcggagtcattgaaaaccttgcaaagcacctcgttgaccatcatggtgttcccaagag 1957
            ||| |||||||| ||  |||||||||||||||| ||||| ||| | |||||||| |||||
Sbjct: 1820 aggtggagtcatcgatgaccttgcaaagcaccttgttgatcattacggtgttccgaagag 1879

                                        
Query: 1958 atatattgaggtttatgacaaaacaaag 1985
             | ||||||||||  |||||||||||||
Sbjct: 1880 gtttattgaggttcttgacaaaacaaag 1907



 Score =  597 bits (301), Expect = e-167
 Identities = 535/613 (87%)
 Strand = Plus / Plus

                                                                       
Query: 199 ccatgttcaagaagaatgttgatgcaaaagctctacaacgtttgtcaggcgctgacaaaa 258
           |||||||||||||| ||||||||| ||| |||||||| |||||||| || ||||||||||
Sbjct: 100 ccatgttcaagaagcatgttgatgtaaaggctctacagcgtttgtcgggagctgacaaaa 159

                                                                       
Query: 259 agaagctgagaagaaccgccaagcaaaggtttccgcaagcatctgatgatgatctggatg 318
           ||||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||||
Sbjct: 160 agaagctcagaagaactgccaaggaaaggttcccacaagcatctgatgctgaccttgatg 219

                                                                       
Query: 319 tcattcttcctccaaaggttgagataacagtcgctaagtacccaagccggactcttgttt 378
            ||| |||||||| ||||||||| ||||||| |||||||||||||   ||  |||||| |
Sbjct: 220 ccatccttcctcccaaggttgaggtaacagttgctaagtacccaaatagggttcttgtat 279

                                                                       
Query: 379 atggcatagagggtggattcccaatgctattcgacattgatggaagaggccatgagctgt 438
           ||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 280 atggcatagagggagagttcccaatgcttttcgacattgatggaagaggccatgagctgt 339

                                                                       
Query: 439 ttccaacagtttatgcactctggaacgttcctcatctgttgccagcttttacacttaagg 498
           ||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||
Sbjct: 340 ttccaacagtttatgcactctggaaggttcccgatctgttgcctgcttttacacttaagg 399

                                                                       
Query: 499 gtggtgaagtttcacacttcattcttggtggcgctgatcttatgtttcctggtatcagcg 558
           |||||||||| |||| |||||| || || || || ||||| |||||||||||||| ||| 
Sbjct: 400 gtggtgaagtctcacgcttcatactggggggtgccgatctgatgtttcctggtattagca 459

                                                                       
Query: 559 tacccccagaaggattaccttctttccaagctggccagccatggtcagttaaagtccctg 618
           |||||||||||||  | ||||| || ||| ||||||||||||||||||| || || ||||
Sbjct: 460 tacccccagaagggcttccttcctttcaacctggccagccatggtcagtaaaggttcctg 519

                                                                       
Query: 619 gtaaccatgctccaattgctgttgggacaacaactgtgagcaatactgaagcactaaagg 678
           |||| | ||||||||||||||||||| | |||||| |||||| || ||||||  ||||||
Sbjct: 520 gtaatcctgctccaattgctgttggggccacaactatgagcagtaatgaagccttaaagg 579

                                                                       
Query: 679 caggattacgtggcaaggctttgcggattgcacattactataaagatttgttatgggctt 738
           |||| |||||||||||||||||||||||| | || |||| ||| ||||  ||||||| ||
Sbjct: 580 cagggttacgtggcaaggctttgcggattactcactactttaaggattcattatgggatt 639

                                                                       
Query: 739 ctgcggatggtcgttatgtcccaaatgaaggattttatgatgacatggttattgaagatc 798
           |||| |||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||||
Sbjct: 640 ctgctgatggtcgctatgttccaaatgaaggattttatgaggacattgttgttgaagatc 699

                        
Query: 799 ctaattttgcttc 811
            ||||| ||||||
Sbjct: 700 gtaattatgcttc 712

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  331 bits (167), Expect = 6e-87
 Identities = 320/371 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1494     aggtacgtggagaaggaaaatttggtcaagcaaacagataaggccaaagtaattctggat 1553
                |||||||| || |||||||||||||| || |||||||| |||||||||||| || |||||
Sbjct: 21136342 aggtacgttgaaaaggaaaatttggttaaacaaacagacaaggccaaagtagttttggat 21136283

                                                                            
Query: 1554     gctacattatgtgatgctctgtacaaaggagctgtcaagaagggttcagcatacccaagt 1613
                | | ||||||| || ||||| |||||||||||  |||| |||||||||||||||||||  
Sbjct: 21136282 gttgcattatgcgacgctctctacaaaggagccatcaaaaagggttcagcatacccaacc 21136223

                                                                            
Query: 1614     gagatacacaagaaggatttagggtcaacatttattaaccgtatgcaaattcatcataga 1673
                ||||| ||||||| |||  | |||||||||||| | ||||| ||||| ||||| ||||||
Sbjct: 21136222 gagatccacaagagggacctggggtcaacatttttaaaccgaatgcagattcaccataga 21136163

                                                                            
Query: 1674     gtagctagaggaaatgaggtggtcattcgcaagggtgccatacgaactgttcaaatcatg 1733
                ||||| ||||| || |||||||||||||||||||| |||||||||||  |||| ||||||
Sbjct: 21136162 gtagcaagagggaacgaggtggtcattcgcaagggcgccatacgaaccattcagatcatg 21136103

                                                                            
Query: 1734     acagaaagaagacaagggaacaagaagatgacccgagtctctggattggaatgctttttg 1793
                ||||| ||||| ||||| |||||||||||||||||  | ||||||||||||||||| || 
Sbjct: 21136102 acagagagaaggcaaggaaacaagaagatgacccggctatctggattggaatgcttctta 21136043

                                                                            
Query: 1794     ctggatgccgactccttggcttctgaactacaaaagaaatttgcttgcagcaccaccaca 1853
                 ||||| | ||||| || |||||||| || || ||||| |||||||||||||||||||||
Sbjct: 21136042 atggatcctgactcgttagcttctgagctgcagaagaagtttgcttgcagcaccaccaca 21135983

                           
Query: 1854     gctgagcttcc 1864
                |||||||||||
Sbjct: 21135982 gctgagcttcc 21135972



 Score =  190 bits (96), Expect = 2e-44
 Identities = 171/196 (87%)
 Strand = Plus / Minus

                                                                            
Query: 445      cagtttatgcactctggaacgttcctcatctgttgccagcttttacacttaagggtggtg 504
                ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||
Sbjct: 21138732 cagtttatgcactctggaaggttcccgatctgttgcctgcttttacacttaagggtggtg 21138673

                                                                            
Query: 505      aagtttcacacttcattcttggtggcgctgatcttatgtttcctggtatcagcgtacccc 564
                |||| |||| |||||| || || || || ||||| |||||||||||||| ||| ||||||
Sbjct: 21138672 aagtctcacgcttcatactggggggtgccgatctgatgtttcctggtattagcatacccc 21138613

                                                                            
Query: 565      cagaaggattaccttctttccaagctggccagccatggtcagttaaagtccctggtaacc 624
                |||||||  | ||||| || ||| ||||||||||||||||||| || || |||||||| |
Sbjct: 21138612 cagaagggcttccttcctttcaacctggccagccatggtcagtaaaggttcctggtaatc 21138553

                                
Query: 625      atgctccaattgctgt 640
                 |||||||||||||||
Sbjct: 21138552 ctgctccaattgctgt 21138537



 Score =  147 bits (74), Expect = 2e-31
 Identities = 203/246 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1231     caaaagaggacaagcataaaaaagaagtcatgttgataggtattaatcgcaaacatccag 1290
                ||||||| |||||||||||||| |||||||||||| |  |||| |||||    |||||||
Sbjct: 21136750 caaaagaagacaagcataaaaaggaagtcatgttgcttcgtatcaatcgtgggcatccag 21136691

                                                                            
Query: 1291     actacacggccttcaaacatcaaaagaaggtacaggagccagttgaacagcatgataaca 1350
                | |||| |||||| ||||   |||||| |||||||||||| |||| ||||||||||||  
Sbjct: 21136690 attacatggcctttaaaccagaaaagagggtacaggagcctgttgtacagcatgataatg 21136631

                                                                            
Query: 1351     ttgttggcgaaggcagcagtacaaagcaactggaagtggatgaaatttataagtcaagtt 1410
                ||||||  ||||| ||||| || |||||||||||||| |  |||| ||||||| |||| |
Sbjct: 21136630 ttgttgctgaaggtagcagcacgaagcaactggaagtagcagaaacttataagccaagct 21136571

                                                                            
Query: 1411     cgcatgtcaaccccatatttttggctgttgacgctgacacagggaagtattacagtgcat 1470
                | ||||| |||||||||||| |||||||||  || |||||  | ||||| || |||||||
Sbjct: 21136570 ctcatgttaaccccatatttatggctgttggagcggacacgagcaagtactatagtgcat 21136511

                      
Query: 1471     cagagg 1476
                ||||||
Sbjct: 21136510 cagagg 21136505



 Score =  147 bits (74), Expect = 2e-31
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1114     ggtcaaatcacatactcccatgcagacctccaggtgttacccttgatattaagaagtcat 1173
                ||||||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||
Sbjct: 21137398 ggtcaaatcacatactcccctgcagacctacaggtgttactctggatattaagaagtcat 21137339

                                                                  
Query: 1174     cacataaaaagctatccaagtggctgcagtcaaaatcttcttctggcctt 1223
                |||| |||||||||||||||||| |||| |||||||||||  ||||||||
Sbjct: 21137338 cacacaaaaagctatccaagtggttgcaatcaaaatcttccgctggcctt 21137289



 Score =  141 bits (71), Expect = 1e-29
 Identities = 122/139 (87%)
 Strand = Plus / Minus

                                                                            
Query: 199      ccatgttcaagaagaatgttgatgcaaaagctctacaacgtttgtcaggcgctgacaaaa 258
                |||||||||||||| ||||||||| ||| |||||||| |||||||| || ||||||||||
Sbjct: 21140756 ccatgttcaagaagcatgttgatgtaaaggctctacagcgtttgtcgggagctgacaaaa 21140697

                                                                            
Query: 259      agaagctgagaagaaccgccaagcaaaggtttccgcaagcatctgatgatgatctggatg 318
                ||||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||||
Sbjct: 21140696 agaagctcagaagaactgccaaggaaaggttcccacaagcatctgatgctgaccttgatg 21140637

                                   
Query: 319      tcattcttcctccaaaggt 337
                 ||| |||||||| |||||
Sbjct: 21140636 ccatccttcctcccaaggt 21140618



 Score =  131 bits (66), Expect = 1e-26
 Identities = 102/114 (89%)
 Strand = Plus / Minus

                                                                            
Query: 334      aggttgagataacagtcgctaagtacccaagccggactcttgtttatggcatagagggtg 393
                |||||||| ||||||| |||||||||||||   ||  |||||| |||||||||||||| |
Sbjct: 21140276 aggttgaggtaacagttgctaagtacccaaatagggttcttgtatatggcatagagggag 21140217

                                                                      
Query: 394      gattcccaatgctattcgacattgatggaagaggccatgagctgtttccaacag 447
                  ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 21140216 agttcccaatgcttttcgacattgatggaagaggccatgagctgtttccaacag 21140163



 Score =  117 bits (59), Expect = 2e-22
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                            
Query: 998      ggaacatcaacatttgtctactgaagaaattgactatctcttggatatatgccttctgca 1057
                |||||||||  |||||||||| ||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 21137962 ggaacatcagaatttgtctacggaagaaattgactctcttttagataaatgtcttctgca 21137903

                                                                           
Query: 1058     agcattacacacgagcgtaaaagataaagacctcccaatcccaggaagtatattgtggt 1116
                ||| ||||||||||| ||||||||||||||||| || || || ||||||| ||||||||
Sbjct: 21137902 agctttacacacgagtgtaaaagataaagaccttcctattcctggaagtacattgtggt 21137844



 Score =  105 bits (53), Expect = 7e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1861     ttcccggtaaaaaggggcaacatgaggtcttgattcaaggcggagtcattgaaaaccttg 1920
                |||| ||||| || |||||||| ||||||||| ||||||| |||||||| ||  ||||||
Sbjct: 21135873 ttccaggtaagaaagggcaacacgaggtcttggttcaaggtggagtcatcgatgaccttg 21135814

                                                                            
Query: 1921     caaagcacctcgttgaccatcatggtgttcccaagagatatattgaggtttatgacaaaa 1980
                |||||||||| ||||| ||| | |||||||| ||||| | ||||||||||  ||||||||
Sbjct: 21135813 caaagcaccttgttgatcattacggtgttccgaagaggtttattgaggttcttgacaaaa 21135754

                     
Query: 1981     caaag 1985
                |||||
Sbjct: 21135753 caaag 21135749



 Score = 85.7 bits (43), Expect = 6e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 737      ttctgcggatggtcgttatgtcccaaatgaaggattttatgatgacatggttattgaaga 796
                |||||| |||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||
Sbjct: 21138244 ttctgctgatggtcgctatgttccaaatgaaggattttatgaggacattgttgttgaaga 21138185

                               
Query: 797      tcctaattttgcttc 811
                || ||||| ||||||
Sbjct: 21138184 tcgtaattatgcttc 21138170



 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 639      gttgggacaacaactgtgagcaatactgaagcactaaaggcaggattacgtggcaaggct 698
                |||||| | |||||| |||||| || ||||||  |||||||||| |||||||||||||||
Sbjct: 21138419 gttggggccacaactatgagcagtaatgaagccttaaaggcagggttacgtggcaaggct 21138360

                         
Query: 699      ttgcggatt 707
                |||||||||
Sbjct: 21138359 ttgcggatt 21138351

to top

>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score =  331 bits (167), Expect = 6e-87
 Identities = 320/371 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1494  aggtacgtggagaaggaaaatttggtcaagcaaacagataaggccaaagtaattctggat 1553
             |||||||| || |||||||||||||| || |||||||| |||||||||||| || |||||
Sbjct: 43058 aggtacgttgaaaaggaaaatttggttaaacaaacagacaaggccaaagtagttttggat 42999

                                                                         
Query: 1554  gctacattatgtgatgctctgtacaaaggagctgtcaagaagggttcagcatacccaagt 1613
             | | ||||||| || ||||| |||||||||||  |||| |||||||||||||||||||  
Sbjct: 42998 gttgcattatgcgacgctctctacaaaggagccatcaaaaagggttcagcatacccaacc 42939

                                                                         
Query: 1614  gagatacacaagaaggatttagggtcaacatttattaaccgtatgcaaattcatcataga 1673
             ||||| ||||||| |||  | |||||||||||| | ||||| ||||| ||||| ||||||
Sbjct: 42938 gagatccacaagagggacctggggtcaacatttttaaaccgaatgcagattcaccataga 42879

                                                                         
Query: 1674  gtagctagaggaaatgaggtggtcattcgcaagggtgccatacgaactgttcaaatcatg 1733
             ||||| ||||| || |||||||||||||||||||| |||||||||||  |||| ||||||
Sbjct: 42878 gtagcaagagggaacgaggtggtcattcgcaagggcgccatacgaaccattcagatcatg 42819

                                                                         
Query: 1734  acagaaagaagacaagggaacaagaagatgacccgagtctctggattggaatgctttttg 1793
             ||||| ||||| ||||| |||||||||||||||||  | ||||||||||||||||| || 
Sbjct: 42818 acagagagaaggcaaggaaacaagaagatgacccggctatctggattggaatgcttctta 42759

                                                                         
Query: 1794  ctggatgccgactccttggcttctgaactacaaaagaaatttgcttgcagcaccaccaca 1853
              ||||| | ||||| || |||||||| || || ||||| |||||||||||||||||||||
Sbjct: 42758 atggatcctgactcgttagcttctgagctgcagaagaagtttgcttgcagcaccaccaca 42699

                        
Query: 1854  gctgagcttcc 1864
             |||||||||||
Sbjct: 42698 gctgagcttcc 42688



 Score =  190 bits (96), Expect = 2e-44
 Identities = 171/196 (87%)
 Strand = Plus / Minus

                                                                         
Query: 445   cagtttatgcactctggaacgttcctcatctgttgccagcttttacacttaagggtggtg 504
             ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||
Sbjct: 45448 cagtttatgcactctggaaggttcccgatctgttgcctgcttttacacttaagggtggtg 45389

                                                                         
Query: 505   aagtttcacacttcattcttggtggcgctgatcttatgtttcctggtatcagcgtacccc 564
             |||| |||| |||||| || || || || ||||| |||||||||||||| ||| ||||||
Sbjct: 45388 aagtctcacgcttcatactggggggtgccgatctgatgtttcctggtattagcatacccc 45329

                                                                         
Query: 565   cagaaggattaccttctttccaagctggccagccatggtcagttaaagtccctggtaacc 624
             |||||||  | ||||| || ||| ||||||||||||||||||| || || |||||||| |
Sbjct: 45328 cagaagggcttccttcctttcaacctggccagccatggtcagtaaaggttcctggtaatc 45269

                             
Query: 625   atgctccaattgctgt 640
              |||||||||||||||
Sbjct: 45268 ctgctccaattgctgt 45253



 Score =  147 bits (74), Expect = 2e-31
 Identities = 203/246 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1231  caaaagaggacaagcataaaaaagaagtcatgttgataggtattaatcgcaaacatccag 1290
             ||||||| |||||||||||||| |||||||||||| |  |||| |||||    |||||||
Sbjct: 43466 caaaagaagacaagcataaaaaggaagtcatgttgcttcgtatcaatcgtgggcatccag 43407

                                                                         
Query: 1291  actacacggccttcaaacatcaaaagaaggtacaggagccagttgaacagcatgataaca 1350
             | |||| |||||| ||||   |||||| |||||||||||| |||| ||||||||||||  
Sbjct: 43406 attacatggcctttaaaccagaaaagagggtacaggagcctgttgtacagcatgataatg 43347

                                                                         
Query: 1351  ttgttggcgaaggcagcagtacaaagcaactggaagtggatgaaatttataagtcaagtt 1410
             ||||||  ||||| ||||| || |||||||||||||| |  |||| ||||||| |||| |
Sbjct: 43346 ttgttgctgaaggtagcagcacgaagcaactggaagtagcagaaacttataagccaagct 43287

                                                                         
Query: 1411  cgcatgtcaaccccatatttttggctgttgacgctgacacagggaagtattacagtgcat 1470
             | ||||| |||||||||||| |||||||||  || |||||  | ||||| || |||||||
Sbjct: 43286 ctcatgttaaccccatatttatggctgttggagcggacacgagcaagtactatagtgcat 43227

                   
Query: 1471  cagagg 1476
             ||||||
Sbjct: 43226 cagagg 43221



 Score =  147 bits (74), Expect = 2e-31
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1114  ggtcaaatcacatactcccatgcagacctccaggtgttacccttgatattaagaagtcat 1173
             ||||||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||
Sbjct: 44114 ggtcaaatcacatactcccctgcagacctacaggtgttactctggatattaagaagtcat 44055

                                                               
Query: 1174  cacataaaaagctatccaagtggctgcagtcaaaatcttcttctggcctt 1223
             |||| |||||||||||||||||| |||| |||||||||||  ||||||||
Sbjct: 44054 cacacaaaaagctatccaagtggttgcaatcaaaatcttccgctggcctt 44005



 Score =  141 bits (71), Expect = 1e-29
 Identities = 122/139 (87%)
 Strand = Plus / Minus

                                                                         
Query: 199   ccatgttcaagaagaatgttgatgcaaaagctctacaacgtttgtcaggcgctgacaaaa 258
             |||||||||||||| ||||||||| ||| |||||||| |||||||| || ||||||||||
Sbjct: 47472 ccatgttcaagaagcatgttgatgtaaaggctctacagcgtttgtcgggagctgacaaaa 47413

                                                                         
Query: 259   agaagctgagaagaaccgccaagcaaaggtttccgcaagcatctgatgatgatctggatg 318
             ||||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||||
Sbjct: 47412 agaagctcagaagaactgccaaggaaaggttcccacaagcatctgatgctgaccttgatg 47353

                                
Query: 319   tcattcttcctccaaaggt 337
              ||| |||||||| |||||
Sbjct: 47352 ccatccttcctcccaaggt 47334



 Score =  131 bits (66), Expect = 1e-26
 Identities = 102/114 (89%)
 Strand = Plus / Minus

                                                                         
Query: 334   aggttgagataacagtcgctaagtacccaagccggactcttgtttatggcatagagggtg 393
             |||||||| ||||||| |||||||||||||   ||  |||||| |||||||||||||| |
Sbjct: 46992 aggttgaggtaacagttgctaagtacccaaatagggttcttgtatatggcatagagggag 46933

                                                                   
Query: 394   gattcccaatgctattcgacattgatggaagaggccatgagctgtttccaacag 447
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 46932 agttcccaatgcttttcgacattgatggaagaggccatgagctgtttccaacag 46879



 Score =  117 bits (59), Expect = 2e-22
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                         
Query: 998   ggaacatcaacatttgtctactgaagaaattgactatctcttggatatatgccttctgca 1057
             |||||||||  |||||||||| ||||||||||||| ||| || |||| ||| ||||||||
Sbjct: 44678 ggaacatcagaatttgtctacggaagaaattgactctcttttagataaatgtcttctgca 44619

                                                                        
Query: 1058  agcattacacacgagcgtaaaagataaagacctcccaatcccaggaagtatattgtggt 1116
             ||| ||||||||||| ||||||||||||||||| || || || ||||||| ||||||||
Sbjct: 44618 agctttacacacgagtgtaaaagataaagaccttcctattcctggaagtacattgtggt 44560



 Score =  105 bits (53), Expect = 7e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1861  ttcccggtaaaaaggggcaacatgaggtcttgattcaaggcggagtcattgaaaaccttg 1920
             |||| ||||| || |||||||| ||||||||| ||||||| |||||||| ||  ||||||
Sbjct: 42589 ttccaggtaagaaagggcaacacgaggtcttggttcaaggtggagtcatcgatgaccttg 42530

                                                                         
Query: 1921  caaagcacctcgttgaccatcatggtgttcccaagagatatattgaggtttatgacaaaa 1980
             |||||||||| ||||| ||| | |||||||| ||||| | ||||||||||  ||||||||
Sbjct: 42529 caaagcaccttgttgatcattacggtgttccgaagaggtttattgaggttcttgacaaaa 42470

                  
Query: 1981  caaag 1985
             |||||
Sbjct: 42469 caaag 42465



 Score = 85.7 bits (43), Expect = 6e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 737   ttctgcggatggtcgttatgtcccaaatgaaggattttatgatgacatggttattgaaga 796
             |||||| |||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||
Sbjct: 44960 ttctgctgatggtcgctatgttccaaatgaaggattttatgaggacattgttgttgaaga 44901

                            
Query: 797   tcctaattttgcttc 811
             || ||||| ||||||
Sbjct: 44900 tcgtaattatgcttc 44886



 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 639   gttgggacaacaactgtgagcaatactgaagcactaaaggcaggattacgtggcaaggct 698
             |||||| | |||||| |||||| || ||||||  |||||||||| |||||||||||||||
Sbjct: 45135 gttggggccacaactatgagcagtaatgaagccttaaaggcagggttacgtggcaaggct 45076

                      
Query: 699   ttgcggatt 707
             |||||||||
Sbjct: 45075 ttgcggatt 45067

to top

>dbj|AK227085.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL09-69-J08
          Length = 1943

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1155 cttgatattaagaagtcatcacataaaaagctatccaagtggctgca 1201
            ||||| ||||||||||| || ||||||||| | || |||||||||||
Sbjct: 979  cttgacattaagaagtcttcccataaaaagttgtcaaagtggctgca 1025

to top

>ref|NM_105804.3| Arabidopsis thaliana translation initiation factor (AT1G71350) mRNA,
            complete cds
          Length = 1933

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1155 cttgatattaagaagtcatcacataaaaagctatccaagtggctgca 1201
            ||||| ||||||||||| || ||||||||| | || |||||||||||
Sbjct: 977  cttgacattaagaagtcttcccataaaaagttgtcaaagtggctgca 1023

to top

>gb|AY099613.1| Arabidopsis thaliana unknown protein (At1g71350) mRNA, complete cds
          Length = 2379

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1155 cttgatattaagaagtcatcacataaaaagctatccaagtggctgca 1201
            ||||| ||||||||||| || ||||||||| | || |||||||||||
Sbjct: 1143 cttgacattaagaagtcttcccataaaaagttgtcaaagtggctgca 1189

to top

>gb|BT006330.1| Arabidopsis thaliana At1g71350 mRNA, complete cds
          Length = 873

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1155 cttgatattaagaagtcatcacataaaaagctatccaagtggctgca 1201
            ||||| ||||||||||| || ||||||||| | || |||||||||||
Sbjct: 754  cttgacattaagaagtcttcccataaaaagttgtcaaagtggctgca 800

to top

>gb|AC016162.5|AC016162 Arabidopsis thaliana chromosome 1 BAC F3I17 genomic sequence, complete
             sequence
          Length = 107579

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 1155  cttgatattaagaagtcatcacataaaaagctatccaagtggctgca 1201
             ||||| ||||||||||| || ||||||||| | || |||||||||||
Sbjct: 53126 cttgacattaagaagtcttcccataaaaagttgtcaaagtggctgca 53172

to top

>gb|AC016163.6|AC016163 Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete
             sequence
          Length = 89653

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 1155  cttgatattaagaagtcatcacataaaaagctatccaagtggctgca 1201
             ||||| ||||||||||| || ||||||||| | || |||||||||||
Sbjct: 86335 cttgacattaagaagtcttcccataaaaagttgtcaaagtggctgca 86381

to top

>gb|AC002381.1| Homo sapiens BAC clone CTB-20D2 from 7, complete sequence
          Length = 172533

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1904   agtcattgaaaaccttgcaaag 1925
              ||||||||||||||||||||||
Sbjct: 167067 agtcattgaaaaccttgcaaag 167088

to top

>gb|AC147974.2| Pan troglodytes BAC clone RP43-67J16 from 7, complete sequence
          Length = 170261

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1904  agtcattgaaaaccttgcaaag 1925
             ||||||||||||||||||||||
Sbjct: 27151 agtcattgaaaaccttgcaaag 27172

to top

>gb|AC152057.11| Medicago truncatula clone mth2-25a12, complete sequence
          Length = 108797

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2215  ttgataatgatatggtgacaat 2236
             ||||||||||||||||||||||
Sbjct: 14056 ttgataatgatatggtgacaat 14077

to top

>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 864   aaagcagctgttgatgtgtcgg 885
             ||||||||||||||||||||||
Sbjct: 16455 aaagcagctgttgatgtgtcgg 16476

to top

>dbj|AK160425.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700108B06 product:unclassifiable, full
           insert sequence
          Length = 396

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 864 aaagcagctgttgatgtgtcgg 885
           ||||||||||||||||||||||
Sbjct: 22  aaagcagctgttgatgtgtcgg 43

to top

>dbj|AK076930.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930558F09 product:unclassifiable, full
           insert sequence
          Length = 721

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 864 aaagcagctgttgatgtgtcgg 885
           ||||||||||||||||||||||
Sbjct: 13  aaagcagctgttgatgtgtcgg 34

to top

>gb|AC090625.5| Homo sapiens chromosome 11, clone RP4-683L5, complete sequence
          Length = 142522

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 1809   ttggcttctgaactacaaaagaaatttgct 1838
              |||||||||||||||||||| |||| ||||
Sbjct: 134396 ttggcttctgaactacaaaacaaatgtgct 134367

to top

>gb|AC125319.5| Mus musculus BAC clone RP23-472L3 from 5, complete sequence
          Length = 186202

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 864    aaagcagctgttgatgtgtcgg 885
              ||||||||||||||||||||||
Sbjct: 168919 aaagcagctgttgatgtgtcgg 168940

to top

>ref|XM_001153103.1| PREDICTED: Pan troglodytes regeneration associated muscle protease,
            transcript variant 2 (LOC451123), mRNA
          Length = 3259

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1809 ttggcttctgaactacaaaagaaat 1833
            |||||||||||||||||||| ||||
Sbjct: 3235 ttggcttctgaactacaaaacaaat 3259

to top

>ref|XM_508370.2| PREDICTED: Pan troglodytes regeneration associated muscle protease,
            transcript variant 3 (LOC451123), mRNA
          Length = 3310

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1809 ttggcttctgaactacaaaagaaat 1833
            |||||||||||||||||||| ||||
Sbjct: 3286 ttggcttctgaactacaaaacaaat 3310

to top

>ref|XM_001152976.1| PREDICTED: Pan troglodytes regeneration associated muscle protease,
            transcript variant 1 (LOC451123), mRNA
          Length = 2794

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1809 ttggcttctgaactacaaaagaaat 1833
            |||||||||||||||||||| ||||
Sbjct: 2770 ttggcttctgaactacaaaacaaat 2794

to top

>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 125     gcccgccgccgacgccgtcga 145
               |||||||||||||||||||||
Sbjct: 1421032 gcccgccgccgacgccgtcga 1421052

to top

>ref|XM_361619.1| Magnaporthe grisea 70-15 hypothetical protein (MG04093.4) partial
            mRNA
          Length = 9321

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 974  aaccaccgaggagaccgagga 994
            |||||||||||||||||||||
Sbjct: 5949 aaccaccgaggagaccgagga 5969

to top

>gb|AY314119.1| HIV-1 from USA isolate WC14P5 envelope glycoprotein (env) gene,
            partial cds
          Length = 1291

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1119 aatcacatactcccatgcaga 1139
            |||||||||||||||||||||
Sbjct: 944  aatcacatactcccatgcaga 964

to top

>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence
          Length = 100538

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1775  tggattggaatgctttttgctggat 1799
             ||||||||||||| |||||||||||
Sbjct: 26505 tggattggaatgcgttttgctggat 26529

to top

>gb|AF002993.1|HSAF002993 Homo sapiens cosmid from 7q22, complete sequence
          Length = 34921

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1496 atgacaaaacaaagaagtcggaggg 1520

to top

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 126     cccgccgccgacgccgtcgat 146
               |||||||||||||||||||||
Sbjct: 3936144 cccgccgccgacgccgtcgat 3936124

to top

>gb|AC145821.16| Papio anubis clone rp41-103i16, complete sequence
          Length = 169553

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1473   gaggtgtttgatgtggttttc 1493
              |||||||||||||||||||||
Sbjct: 159867 gaggtgtttgatgtggttttc 159887

to top

>ref|XM_544753.2| PREDICTED: Canis familiaris similar to CG6232-PA (LOC487628), mRNA
          Length = 2196

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 981  gaggagaccgaggagaaggaa 1001
            |||||||||||||||||||||
Sbjct: 832  gaggagaccgaggagaaggaa 852

to top

>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete sequence
          Length = 215576

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1951   ccaagagatatattgaggttt 1971
              |||||||||||||||||||||
Sbjct: 168516 ccaagagatatattgaggttt 168536

to top

>gb|AC012588.14| Homo sapiens chromosome 18, clone RP11-17A19, complete sequence
          Length = 148738

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2177  taattgtgacatcaaaacaga 2197
             |||||||||||||||||||||
Sbjct: 93919 taattgtgacatcaaaacaga 93899

to top

>gb|AF248955.1| Homo sapiens arsenite-resistant protein ASR2 (ASR2) mRNA, complete
            cds
          Length = 2983

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1196 atgacaaaacaaagaagtcggaggg 1220

to top

>gb|AC090337.5| Homo sapiens chromosome 18, clone RP11-674P19, complete sequence
          Length = 183876

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1739  aagaagacaagggaacaagaa 1759
             |||||||||||||||||||||
Sbjct: 59873 aagaagacaagggaacaagaa 59853

to top

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 190     acccagaaaccatgttcaaga 210
               |||||||||||||||||||||
Sbjct: 1104308 acccagaaaccatgttcaaga 1104288

to top

>gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, complete sequence
          Length = 172358

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1972   atgacaaaacaaagaagtaggaggg 1996
              |||||||||||||||||| ||||||
Sbjct: 126894 atgacaaaacaaagaagtcggaggg 126918

to top

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1382    ggaagtggatgaaatttataa 1402
               |||||||||||||||||||||
Sbjct: 1811749 ggaagtggatgaaatttataa 1811769

to top

>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 4/10
          Length = 349459

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   acccagaaaccatgttcaaga 210
             |||||||||||||||||||||
Sbjct: 59495 acccagaaaccatgttcaaga 59475

to top

>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 126    cccgccgccgacgccgtcgat 146
              |||||||||||||||||||||
Sbjct: 125369 cccgccgccgacgccgtcgat 125349

to top

>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 126    cccgccgccgacgccgtcgat 146
              |||||||||||||||||||||
Sbjct: 136135 cccgccgccgacgccgtcgat 136115

to top

>emb|AL096723.1|HSM800627 Homo sapiens mRNA; cDNA DKFZp564H2023 (from clone DKFZp564H2023)
          Length = 2983

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1188 atgacaaaacaaagaagtcggaggg 1212

to top

>gb|AF312032.1|AF312032 Homo sapiens acetylcholinesterase (ACHE) gene, partial cds; ASR2
            (ASR2) gene, complete cds, alternatively spliced; thyroid
            receptor interacting protein 6 (TRIP6) gene, complete
            cds; cation-chloride cotransporter (CIP1) gene, complete
            cds, alternatively spliced; ephrin type-B receptor 4
            precursor (EPHB4) and zonadhesin (ZAN) genes, complete
            cds; and unknown gene
          Length = 117962

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 6557 atgacaaaacaaagaagtcggaggg 6533

to top

>emb|CR861036.1| Pongo pygmaeus mRNA; cDNA DKFZp470E1612 (from clone DKFZp470E1612)
          Length = 3035

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1209 atgacaaaacaaagaagtcggaggg 1233

to top

>gb|AC023510.16|AC023510 Homo sapiens 12 BAC RP11-713N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153241

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2174   aactaattgtgacatcaaaac 2194
              |||||||||||||||||||||
Sbjct: 104119 aactaattgtgacatcaaaac 104099

to top

>gb|BC109117.1| Homo sapiens ARS2 protein, mRNA (cDNA clone MGC:126427
            IMAGE:40035609), complete cds
          Length = 2894

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1127 atgacaaaacaaagaagtcggaggg 1151

to top

>gb|BC069249.1| Homo sapiens ARS2 protein, mRNA (cDNA clone IMAGE:5427083), partial
            cds
          Length = 2581

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 774  atgacaaaacaaagaagtcggaggg 798

to top

>gb|AF025405.1|AF025405 Mycobacterium tuberculosis PGRS-like secondary fingerprinting probe
           MTB485(1), region 3
          Length = 507

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 126 cccgccgccgacgccgtcgat 146
           |||||||||||||||||||||
Sbjct: 275 cccgccgccgacgccgtcgat 295

to top

>gb|AF025400.1|AF025400 Mycobacterium tuberculosis PGRS-like secondary fingerprinting probe
           MTB484(1), region 3
          Length = 615

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 126 cccgccgccgacgccgtcgat 146
           |||||||||||||||||||||
Sbjct: 340 cccgccgccgacgccgtcgat 360

to top

>gb|BC109116.1| Homo sapiens cDNA clone IMAGE:40035608
          Length = 2905

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1123 atgacaaaacaaagaagtcggaggg 1147

to top

>ref|NM_182800.2| Homo sapiens ARS2 protein (ARS2), transcript variant 2, mRNA
          Length = 3065

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1272 atgacaaaacaaagaagtcggaggg 1296

to top

>ref|NM_015908.4| Homo sapiens ARS2 protein (ARS2), transcript variant 1, mRNA
          Length = 2994

 Score = 42.1 bits (21), Expect = 8.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1972 atgacaaaacaaagaagtaggaggg 1996
            |||||||||||||||||| ||||||
Sbjct: 1198 atgacaaaacaaagaagtcggaggg 1222


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 441,980,781
Number of extensions: 23418582
Number of successful extensions: 120304
Number of sequences better than 10.0: 50
Number of HSP's gapped: 120294
Number of HSP's successfully gapped: 70
Length of query: 2251
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2228
Effective length of database: 18,503,978,556
Effective search space: 41226864222768
Effective search space used: 41226864222768
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result