ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf90m01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001053244.1| Oryza sativa (japonica cultivar-group) Os02g... 206 1e-49
2dbj|AK104165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 1e-49
3dbj|AK073631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 1e-49
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
5dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
6dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
7gb|DQ245128.1| Zea mays clone 13191 mRNA sequence 147 9e-32
8gb|DQ244350.1| Zea mays clone 5343 mRNA sequence 133 1e-27
9emb|CT830200.1| Oryza sativa (indica cultivar-group) cDNA clone:... 62 4e-06
10ref|NM_001069218.1| Oryza sativa (japonica cultivar-group) Os09g... 62 4e-06
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 4e-06
12dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 62 4e-06
13dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic D... 62 4e-06
14dbj|AK104010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 4e-06
15dbj|AK061218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 4e-06
16gb|AY103837.1| Zea mays PCO137419 mRNA sequence 48 0.060
17gb|AC092622.2| Homo sapiens BAC clone RP11-254O14 from 2, comple... 46 0.24
18gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, com... 44 0.93
19gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, co... 44 0.93
20ref|NM_113379.1| Arabidopsis thaliana unknown protein (AT3G24680... 44 0.93
21gb|DQ056608.1| Arabidopsis thaliana putative zinc finger protein... 44 0.93
22emb|Y12363.1|ABFLCA A.brasilense flcA gene 44 0.93
23dbj|AP000740.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.93
24gb|L47193.1|ATHRETR Arabidopsis thaliana (clone DW15) zinc-finge... 44 0.93
25gb|DQ273697.1| Crocodylus niloticus mitochondrion, complete genome 42 3.7
26ref|NM_001066255.1| Oryza sativa (japonica cultivar-group) Os07g... 42 3.7
27gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 3.7
28gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome... 42 3.7
29gb|AF165926.2| Homo sapiens chromosome 5p13 BAC clone djn085o06 ... 42 3.7
30dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 42 3.7
31gb|AC104390.6| Homo sapiens chromosome 15, clone CTD-2643K12, co... 42 3.7
32gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, co... 42 3.7
33gb|AC117532.2| Homo sapiens chromosome 5 clone RP11-648M2, compl... 42 3.7
34gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, com... 42 3.7
35emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chro... 42 3.7
36emb|CR847546.6| Zebrafish DNA sequence from clone CH211-261D5 in... 42 3.7
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
38gb|AC096948.2| Homo sapiens chromosome 1 clone RP4-809J13, compl... 42 3.7
39emb|AL139239.18| Human DNA sequence from clone RP11-19C6 on chro... 42 3.7
40emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 42 3.7
41gb|AC097378.2| Homo sapiens BAC clone RP11-123G5 from 4, complet... 42 3.7
42emb|CR858635.1| Pongo pygmaeus mRNA; cDNA DKFZp459N0643 (from cl... 42 3.7
43gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C... 42 3.7
44gb|AC138392.2| Homo sapiens chromosome 1 clone RP11-181C21, comp... 42 3.7
45gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, co... 42 3.7
46dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
47dbj|AK070911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
48gb|AY111262.1| Zea mays CL57609_1 mRNA sequence 42 3.7
49emb|CR394550.5| Zebrafish DNA sequence from clone CH211-231O11 i... 42 3.7
50emb|AJ810452.1| Crocodylus niloticus complete mitochondrial genome 42 3.7
51emb|CT010496.14| Mouse DNA sequence from clone RP23-193I7 on chr... 42 3.7

>ref|NM_001053244.1| Oryza sativa (japonica cultivar-group) Os02g0327000 (Os02g0327000)
           mRNA, complete cds
          Length = 1059
 Score =  206 bits (104), Expect = 1e-49
 Identities = 227/268 (84%)
 Strand = Plus / Plus

                                                                       
Query: 115 gttggggcatctggttgggctggtgaaggtgcgggtgacgcgcggggtgaacctcgccat 174
           |||||||||||||||||||||||||||||||||||||  | | || || ||||||||| |
Sbjct: 197 gttggggcatctggttgggctggtgaaggtgcgggtggtgaggggcgtcaacctcgccgt 256

                                                                       
Query: 175 ccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaagcagaagctcaa 234
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct: 257 ccgcgacctccgctccagcgacccctacgtcatcgtccgcatgggcaagcagaagttgaa 316

                                                                       
Query: 235 gacgcgggtggtgaggaagagcatcaatccggagtggaacgacgagctcaccctctccgt 294
           ||| || ||  | |  ||||  | |||||||||||||||||| || |||||||||||  |
Sbjct: 317 gacacgagtcataaaaaagactaccaatccggagtggaacgatgaactcaccctctcgat 376

                                                                       
Query: 295 cgaagatcccactgttcctgtcaaactggacgtgttcgacaaggacacattcttcgacga 354
            ||||||||  | |||||||| | |||||| ||||  ||||| ||||||||| |||| ||
Sbjct: 377 tgaagatccagcagttcctgttagactggaagtgtatgacaaagacacattcatcgatga 436

                                       
Query: 355 cccgatggggaacgcggagctggacatc 382
             | ||||| || |||||||||||||||
Sbjct: 437 tgcaatgggcaatgcggagctggacatc 464



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 514 ggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctcca 573
           ||||||||| |||||||| ||||| || ||| | || || ||||||||  | ||||||||
Sbjct: 593 ggtgaagcaagacgtggttctcagactaagggatgtggaatgcggggaaattgagctcca 652

                                
Query: 574 gctccagtggatcgacatccc 594
           ||| |||||| ||||||||||
Sbjct: 653 gcttcagtgggtcgacatccc 673



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>dbj|AK104165.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C07, full
           insert sequence
          Length = 966

 Score =  206 bits (104), Expect = 1e-49
 Identities = 227/268 (84%)
 Strand = Plus / Plus

                                                                       
Query: 115 gttggggcatctggttgggctggtgaaggtgcgggtgacgcgcggggtgaacctcgccat 174
           |||||||||||||||||||||||||||||||||||||  | | || || ||||||||| |
Sbjct: 111 gttggggcatctggttgggctggtgaaggtgcgggtggtgaggggcgtcaacctcgccgt 170

                                                                       
Query: 175 ccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaagcagaagctcaa 234
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct: 171 ccgcgacctccgctccagcgacccctacgtcatcgtccgcatgggcaagcagaagttgaa 230

                                                                       
Query: 235 gacgcgggtggtgaggaagagcatcaatccggagtggaacgacgagctcaccctctccgt 294
           ||| || ||  | |  ||||  | |||||||||||||||||| || |||||||||||  |
Sbjct: 231 gacacgagtcataaaaaagactaccaatccggagtggaacgatgaactcaccctctcgat 290

                                                                       
Query: 295 cgaagatcccactgttcctgtcaaactggacgtgttcgacaaggacacattcttcgacga 354
            ||||||||  | |||||||| | |||||| ||||  ||||| ||||||||| |||| ||
Sbjct: 291 tgaagatccagcagttcctgttagactggaagtgtatgacaaagacacattcatcgatga 350

                                       
Query: 355 cccgatggggaacgcggagctggacatc 382
             | ||||| || |||||||||||||||
Sbjct: 351 tgcaatgggcaatgcggagctggacatc 378



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 514 ggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctcca 573
           ||||||||| |||||||| ||||| || ||| | || || ||||||||  | ||||||||
Sbjct: 507 ggtgaagcaagacgtggttctcagactaagggatgtggaatgcggggaaattgagctcca 566

                                
Query: 574 gctccagtggatcgacatccc 594
           ||| |||||| ||||||||||
Sbjct: 567 gcttcagtgggtcgacatccc 587



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>dbj|AK073631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052D22, full
           insert sequence
          Length = 1059

 Score =  206 bits (104), Expect = 1e-49
 Identities = 227/268 (84%)
 Strand = Plus / Plus

                                                                       
Query: 115 gttggggcatctggttgggctggtgaaggtgcgggtgacgcgcggggtgaacctcgccat 174
           |||||||||||||||||||||||||||||||||||||  | | || || ||||||||| |
Sbjct: 197 gttggggcatctggttgggctggtgaaggtgcgggtggtgaggggcgtcaacctcgccgt 256

                                                                       
Query: 175 ccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaagcagaagctcaa 234
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct: 257 ccgcgacctccgctccagcgacccctacgtcatcgtccgcatgggcaagcagaagttgaa 316

                                                                       
Query: 235 gacgcgggtggtgaggaagagcatcaatccggagtggaacgacgagctcaccctctccgt 294
           ||| || ||  | |  ||||  | |||||||||||||||||| || |||||||||||  |
Sbjct: 317 gacacgagtcataaaaaagactaccaatccggagtggaacgatgaactcaccctctcgat 376

                                                                       
Query: 295 cgaagatcccactgttcctgtcaaactggacgtgttcgacaaggacacattcttcgacga 354
            ||||||||  | |||||||| | |||||| ||||  ||||| ||||||||| |||| ||
Sbjct: 377 tgaagatccagcagttcctgttagactggaagtgtatgacaaagacacattcatcgatga 436

                                       
Query: 355 cccgatggggaacgcggagctggacatc 382
             | ||||| || |||||||||||||||
Sbjct: 437 tgcaatgggcaatgcggagctggacatc 464



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 514 ggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctcca 573
           ||||||||| |||||||| ||||| || ||| | || || ||||||||  | ||||||||
Sbjct: 593 ggtgaagcaagacgtggttctcagactaagggatgtggaatgcggggaaattgagctcca 652

                                
Query: 574 gctccagtggatcgacatccc 594
           ||| |||||| ||||||||||
Sbjct: 653 gcttcagtgggtcgacatccc 673



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  159 bits (80), Expect = 2e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                            
Query: 115      gttggggcatctggttgggctggtgaaggtgcgggtgacgcgcggggtgaacctcgccat 174
                |||||||||||||||||||||||||||||||||||||  | | || || ||||||||| |
Sbjct: 13173076 gttggggcatctggttgggctggtgaaggtgcgggtggtgaggggcgtcaacctcgccgt 13173135

                                                                    
Query: 175      ccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaagcag 226
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 13173136 ccgcgacctccgctccagcgacccctacgtcatcgtccgcatgggcaagcag 13173187



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                            
Query: 514      ggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctcca 573
                ||||||||| |||||||| ||||| || ||| | || || ||||||||  | ||||||||
Sbjct: 13174812 ggtgaagcaagacgtggttctcagactaagggatgtggaatgcggggaaattgagctcca 13174871

                                     
Query: 574      gctccagtggatcgacatccc 594
                ||| |||||| ||||||||||
Sbjct: 13174872 gcttcagtgggtcgacatccc 13174892



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 259      caatccggagtggaacgacgagctcaccctctc 291
                |||||||||||||||||| || |||||||||||
Sbjct: 13173527 caatccggagtggaacgatgaactcaccctctc 13173559



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>dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0042G06
          Length = 123571

 Score =  159 bits (80), Expect = 2e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                         
Query: 115   gttggggcatctggttgggctggtgaaggtgcgggtgacgcgcggggtgaacctcgccat 174
             |||||||||||||||||||||||||||||||||||||  | | || || ||||||||| |
Sbjct: 43106 gttggggcatctggttgggctggtgaaggtgcgggtggtgaggggcgtcaacctcgccgt 43165

                                                                 
Query: 175   ccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaagcag 226
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 43166 ccgcgacctccgctccagcgacccctacgtcatcgtccgcatgggcaagcag 43217



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                         
Query: 514   ggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctcca 573
             ||||||||| |||||||| ||||| || ||| | || || ||||||||  | ||||||||
Sbjct: 44842 ggtgaagcaagacgtggttctcagactaagggatgtggaatgcggggaaattgagctcca 44901

                                  
Query: 574   gctccagtggatcgacatccc 594
             ||| |||||| ||||||||||
Sbjct: 44902 gcttcagtgggtcgacatccc 44922



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 259   caatccggagtggaacgacgagctcaccctctc 291
             |||||||||||||||||| || |||||||||||
Sbjct: 43557 caatccggagtggaacgatgaactcaccctctc 43589



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>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0476C12
          Length = 157570

 Score =  159 bits (80), Expect = 2e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                          
Query: 115    gttggggcatctggttgggctggtgaaggtgcgggtgacgcgcggggtgaacctcgccat 174
              |||||||||||||||||||||||||||||||||||||  | | || || ||||||||| |
Sbjct: 149653 gttggggcatctggttgggctggtgaaggtgcgggtggtgaggggcgtcaacctcgccgt 149712

                                                                  
Query: 175    ccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaagcag 226
              ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 149713 ccgcgacctccgctccagcgacccctacgtcatcgtccgcatgggcaagcag 149764



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                          
Query: 514    ggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctcca 573
              ||||||||| |||||||| ||||| || ||| | || || ||||||||  | ||||||||
Sbjct: 151389 ggtgaagcaagacgtggttctcagactaagggatgtggaatgcggggaaattgagctcca 151448

                                   
Query: 574    gctccagtggatcgacatccc 594
              ||| |||||| ||||||||||
Sbjct: 151449 gcttcagtgggtcgacatccc 151469



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 259    caatccggagtggaacgacgagctcaccctctc 291
              |||||||||||||||||| || |||||||||||
Sbjct: 150104 caatccggagtggaacgatgaactcaccctctc 150136



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>gb|DQ245128.1| Zea mays clone 13191 mRNA sequence
          Length = 957

 Score =  147 bits (74), Expect = 9e-32
 Identities = 164/194 (84%)
 Strand = Plus / Plus

                                                                       
Query: 158 ggggtgaacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgcatg 217
           ||||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||| 
Sbjct: 233 ggggtgaacctcgccgtccgcgacctccgatccagcgatccctacgtcgtcgttcgcatc 292

                                                                       
Query: 218 ggcaagcagaagctcaagacgcgggtggtgaggaagagcatcaatccggagtggaacgac 277
           ||||| |||||  | ||||| |||||||| | ||||||  |||||||||| ||| |||||
Sbjct: 293 ggcaaacagaaattgaagacacgggtggtaaagaagagtgtcaatccggaatgggacgac 352

                                                                       
Query: 278 gagctcaccctctccgtcgaagatcccactgttcctgtcaaactggacgtgttcgacaag 337
           || |||||||||||  ||||||| ||  |||||||| | | |||||| || || ||||||
Sbjct: 353 gaactcaccctctctatcgaagaccctgctgttcctattagactggaagtttttgacaag 412

                         
Query: 338 gacacattcttcga 351
           ||||| ||| ||||
Sbjct: 413 gacactttcgtcga 426



 Score = 97.6 bits (49), Expect = 7e-17
 Identities = 139/169 (82%)
 Strand = Plus / Plus

                                                                       
Query: 437 accgtggtgaagaagctggtgcccaaccggcagaactgcctcgccgaggagagcgcggtg 496
           |||||||| ||||| |||||||||||| | ||||||||||| |||||||||||| || | 
Sbjct: 509 accgtggtaaagaaactggtgcccaacagacagaactgcctagccgaggagagctcgata 568

                                                                       
Query: 497 tacctgtccgagggcacggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgc 556
           ||  | || ||||| | ||||||||| ||| ||||  |  |||| |||||||| ||| ||
Sbjct: 569 tatatatcggaggggaaggtgaagcaagacatggttgtacggctgaggaacgtagagagc 628

                                                            
Query: 557 ggggaggtcgagctccagctccagtggatcgacatccccggctccaagg 605
           |||||  | ||||||||||| |||||||||||| |||| ||||| ||||
Sbjct: 629 ggggaaatagagctccagcttcagtggatcgacctccctggctctaagg 677



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>gb|DQ244350.1| Zea mays clone 5343 mRNA sequence
          Length = 793

 Score =  133 bits (67), Expect = 1e-27
 Identities = 183/221 (82%), Gaps = 3/221 (1%)
 Strand = Plus / Plus

                                                                       
Query: 165 acctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgcatgggcaa-- 222
           |||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||  
Sbjct: 163 acctcgccatccgcgacctccgatccagcgacccctacgtcgtccttcgcatcggcaagg 222

                                                                       
Query: 223 -gcagaagctcaagacgcgggtggtgaggaagagcatcaatccggagtggaacgacgagc 281
            ||||||  | |||||||| ||||| | |||||||||||||||||| ||||||||  | |
Sbjct: 223 cgcagaaagtgaagacgcgagtggtcaagaagagcatcaatccggaatggaacgaaaaac 282

                                                                       
Query: 282 tcaccctctccgtcgaagatcccactgttcctgtcaaactggacgtgttcgacaaggaca 341
           ||||||||||  | ||||| ||  | |||||| | | |||||| || || ||||||||||
Sbjct: 283 tcaccctctctattgaagaccctgccgttcctattagactggaagtatttgacaaggaca 342

                                                    
Query: 342 cattcttcgacgacccgatggggaacgcggagctggacatc 382
           | ||| | || ||  | ||||| ||||||||||||||||||
Sbjct: 343 ctttcgttgatgatacaatgggtaacgcggagctggacatc 383



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 135/166 (81%)
 Strand = Plus / Plus

                                                                       
Query: 440 gtggtgaagaagctggtgcccaaccggcagaactgcctcgccgaggagagcgcggtgtac 499
           ||||| |||||||||||||||||| | ||||||||||| |||||||||||| |  | |||
Sbjct: 438 gtggtaaagaagctggtgcccaacagacagaactgcctagccgaggagagctccatatac 497

                                                                       
Query: 500 ctgtccgagggcacggtgaagcaggacgtggtgctcaggctcaggaacgtcgagtgcggg 559
            | || ||||| | ||||||||| ||| ||||  |  |||| |||||||| |||||||| 
Sbjct: 498 atatcggaggggaaggtgaagcaagacctggtcgtacggctaaggaacgtagagtgcggc 557

                                                         
Query: 560 gaggtcgagctccagctccagtggatcgacatccccggctccaagg 605
           ||  |||||||||| || |||||| || || |||| ||||| ||||
Sbjct: 558 gaaatcgagctccaacttcagtgggtccacctccctggctctaagg 603



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>emb|CT830200.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114M09, full
           insert sequence
          Length = 1012

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 164 aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
           ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 282 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 332



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>ref|NM_001069218.1| Oryza sativa (japonica cultivar-group) Os09g0251800 (Os09g0251800)
           mRNA, complete cds
          Length = 1001

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 164 aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
           ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 267 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 317



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 164     aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
               ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 3895937 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 3895987



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>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1080A02
          Length = 151360

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 164    aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
              ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 135453 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 135503



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>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0574F11
          Length = 159891

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 164   aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
             ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 27449 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 27499



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>dbj|AK104010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C07, full
           insert sequence
          Length = 957

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 164 aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
           ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 252 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 302



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>dbj|AK061218.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E07, full
           insert sequence
          Length = 1001

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 164 aacctcgccatccgcgacctccgctccagcgacccctacgtcgtcgtccgc 214
           ||||||||| |||| ||| ||  ||||||||||||||||||||||||||||
Sbjct: 267 aacctcgccgtccgggacttcacctccagcgacccctacgtcgtcgtccgc 317



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>gb|AY103837.1| Zea mays PCO137419 mRNA sequence
          Length = 868

 Score = 48.1 bits (24), Expect = 0.060
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 520 gcaggacgtggtgctcaggctcaggaacgtcgagtgcggggaggtcgagctccagctcca 579
           ||||||| || | ||| ||||||||||||||||| |||||||| |  |||| ||||| ||
Sbjct: 597 gcaggacatgatcctccggctcaggaacgtcgagagcggggagatacagctgcagctgca 656

               
Query: 580 gtgg 583
           ||||
Sbjct: 657 gtgg 660



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>gb|AC092622.2| Homo sapiens BAC clone RP11-254O14 from 2, complete sequence
          Length = 19531

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 898  gagtaatttttcttcttcttttctgag 924
            |||||||||||||| ||||||||||||
Sbjct: 4470 gagtaatttttctttttcttttctgag 4444



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>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome
          Length = 3483902

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 67  ccgcgaacggcggcgaagccga 88
           ||||||||||||||||||||||
Sbjct: 701 ccgcgaacggcggcgaagccga 722



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>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence
          Length = 3294563

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 67      ccgcgaacggcggcgaagccga 88
               ||||||||||||||||||||||
Sbjct: 2802880 ccgcgaacggcggcgaagccga 2802901



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>ref|NM_113379.1| Arabidopsis thaliana unknown protein (AT3G24680) mRNA, complete cds
          Length = 1464

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 692 taaatcatgtttagaatcgaag 713
           ||||||||||||||||||||||
Sbjct: 264 taaatcatgtttagaatcgaag 243



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>gb|DQ056608.1| Arabidopsis thaliana putative zinc finger protein (At3g24680) mRNA,
           complete cds
          Length = 1464

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 692 taaatcatgtttagaatcgaag 713
           ||||||||||||||||||||||
Sbjct: 264 taaatcatgtttagaatcgaag 243



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>emb|Y12363.1|ABFLCA A.brasilense flcA gene
          Length = 2517

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 499  cctgtccgagggcacggtgaag 520
            ||||||||||||||||||||||
Sbjct: 1780 cctgtccgagggcacggtgaag 1801



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>dbj|AP000740.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MSD24
          Length = 40018

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 692   taaatcatgtttagaatcgaag 713
             ||||||||||||||||||||||
Sbjct: 28370 taaatcatgtttagaatcgaag 28391



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>gb|L47193.1|ATHRETR Arabidopsis thaliana (clone DW15) zinc-finger protein gene and
            reverse transcriptase gene, complete cds
          Length = 7808

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 692  taaatcatgtttagaatcgaag 713
            ||||||||||||||||||||||
Sbjct: 1703 taaatcatgtttagaatcgaag 1682



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>gb|DQ273697.1| Crocodylus niloticus mitochondrion, complete genome
          Length = 16776

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 738   gatattatatatatgactctg 758
             |||||||||||||||||||||
Sbjct: 13898 gatattatatatatgactctg 13878



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>ref|NM_001066255.1| Oryza sativa (japonica cultivar-group) Os07g0501700 (Os07g0501700)
           mRNA, complete cds
          Length = 964

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 190 cagcgacccctacgtcgtcgtccgc 214
           ||||||||||||||||||| |||||
Sbjct: 279 cagcgacccctacgtcgtcctccgc 303



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 398    gccgcgaggatgcgggtccagatgc 422
              ||||| |||||||||||||||||||
Sbjct: 739715 gccgccaggatgcgggtccagatgc 739739



 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 398     gccgcgaggatgcgggtccagatgc 422
               ||||| |||||||||||||||||||
Sbjct: 1305617 gccgccaggatgcgggtccagatgc 1305593



 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 398     gccgcgaggatgcgggtccagatgc 422
               ||||| |||||||||||||||||||
Sbjct: 1875897 gccgccaggatgcgggtccagatgc 1875873



 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 398     gccgcgaggatgcgggtccagatgc 422
               ||||| |||||||||||||||||||
Sbjct: 2083219 gccgccaggatgcgggtccagatgc 2083243



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>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence
          Length = 223142

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 901    taatttttcttcttcttttct 921
              |||||||||||||||||||||
Sbjct: 132624 taatttttcttcttcttttct 132644



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>gb|AF165926.2| Homo sapiens chromosome 5p13 BAC clone djn085o06 containing NUP155
             gene, complete sequence
          Length = 165617

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 899   agtaatttttcttcttctttt 919
             |||||||||||||||||||||
Sbjct: 20621 agtaatttttcttcttctttt 20601



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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 897     tgagtaatttttcttcttcttttct 921
               ||||||||||||||||||| |||||
Sbjct: 1273754 tgagtaatttttcttcttcatttct 1273778



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>gb|AC104390.6| Homo sapiens chromosome 15, clone CTD-2643K12, complete sequence
          Length = 201225

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 901   taatttttcttcttcttttct 921
             |||||||||||||||||||||
Sbjct: 23673 taatttttcttcttcttttct 23693



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>gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, complete sequence
          Length = 155985

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 904   tttttcttcttcttttctgag 924
             |||||||||||||||||||||
Sbjct: 83585 tttttcttcttcttttctgag 83605



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>gb|AC117532.2| Homo sapiens chromosome 5 clone RP11-648M2, complete sequence
          Length = 177782

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 899    agtaatttttcttcttctttt 919
              |||||||||||||||||||||
Sbjct: 111676 agtaatttttcttcttctttt 111656



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>gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, complete sequence
          Length = 200326

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 903   atttttcttcttcttttctga 923
             |||||||||||||||||||||
Sbjct: 48367 atttttcttcttcttttctga 48347



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>emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chromosome 17, complete
              sequence
          Length = 197841

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 904    tttttcttcttcttttctgag 924
              |||||||||||||||||||||
Sbjct: 145923 tttttcttcttcttttctgag 145943



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>emb|CR847546.6| Zebrafish DNA sequence from clone CH211-261D5 in linkage group 1,
             complete sequence
          Length = 147811

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 637   ttagctctgcactctctgctcttgg 661
             |||||||||||| ||||||||||||
Sbjct: 32575 ttagctctgcacactctgctcttgg 32551



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 190      cagcgacccctacgtcgtcgtccgc 214
                ||||||||||||||||||| |||||
Sbjct: 18858486 cagcgacccctacgtcgtcctccgc 18858510



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>gb|AC096948.2| Homo sapiens chromosome 1 clone RP4-809J13, complete sequence
          Length = 115596

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 899 agtaatttttcttcttctttt 919
           |||||||||||||||||||||
Sbjct: 376 agtaatttttcttcttctttt 356



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>emb|AL139239.18| Human DNA sequence from clone RP11-19C6 on chromosome 10 Contains the
             5' end of the CRTAC1 gene for cartilage acidic protein 1
             and two CpG islands, complete sequence
          Length = 161235

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 894   tgatgagtaatttttcttctt 914
             |||||||||||||||||||||
Sbjct: 20668 tgatgagtaatttttcttctt 20688



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>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2
          Length = 384550

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 901    taatttttcttcttcttttct 921
              |||||||||||||||||||||
Sbjct: 213343 taatttttcttcttcttttct 213323



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>gb|AC097378.2| Homo sapiens BAC clone RP11-123G5 from 4, complete sequence
          Length = 157417

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 904   tttttcttcttcttttctgag 924
             |||||||||||||||||||||
Sbjct: 53147 tttttcttcttcttttctgag 53127



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>emb|CR858635.1| Pongo pygmaeus mRNA; cDNA DKFZp459N0643 (from clone DKFZp459N0643)
          Length = 2221

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 904 tttttcttcttcttttctgaggaaa 928
           |||||||||||||||||||| ||||
Sbjct: 739 tttttcttcttcttttctgatgaaa 763



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>gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C11, complete sequence
          Length = 204843

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 824    ggattccatcctcctttcttg 844
              |||||||||||||||||||||
Sbjct: 156260 ggattccatcctcctttcttg 156240



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>gb|AC138392.2| Homo sapiens chromosome 1 clone RP11-181C21, complete sequence
          Length = 161502

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 899   agtaatttttcttcttctttt 919
             |||||||||||||||||||||
Sbjct: 86971 agtaatttttcttcttctttt 86951



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>gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, complete sequence
          Length = 181413

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 901   taatttttcttcttcttttct 921
             |||||||||||||||||||||
Sbjct: 34679 taatttttcttcttcttttct 34659



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>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_F06
          Length = 104419

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 190   cagcgacccctacgtcgtcgtccgc 214
             ||||||||||||||||||| |||||
Sbjct: 58672 cagcgacccctacgtcgtcctccgc 58696



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>dbj|AK070911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068D10, full
           insert sequence
          Length = 963

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 190 cagcgacccctacgtcgtcgtccgc 214
           ||||||||||||||||||| |||||
Sbjct: 280 cagcgacccctacgtcgtcctccgc 304



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>gb|AY111262.1| Zea mays CL57609_1 mRNA sequence
          Length = 862

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 190 cagcgacccctacgtcgtcgtccgc 214
           ||||||||||||||||||| |||||
Sbjct: 626 cagcgacccctacgtcgtcctccgc 602



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>emb|CR394550.5| Zebrafish DNA sequence from clone CH211-231O11 in linkage group 10,
            complete sequence
          Length = 170825

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 901  taatttttcttcttcttttct 921
            |||||||||||||||||||||
Sbjct: 8656 taatttttcttcttcttttct 8636



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>emb|AJ810452.1| Crocodylus niloticus complete mitochondrial genome
          Length = 16830

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 738   gatattatatatatgactctg 758
             |||||||||||||||||||||
Sbjct: 13893 gatattatatatatgactctg 13873



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>emb|CT010496.14| Mouse DNA sequence from clone RP23-193I7 on chromosome 17, complete
             sequence
          Length = 209258

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 904   tttttcttcttcttttctgag 924
             |||||||||||||||||||||
Sbjct: 39318 tttttcttcttcttttctgag 39338


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 161,275,464
Number of extensions: 9699931
Number of successful extensions: 241159
Number of sequences better than 10.0: 51
Number of HSP's gapped: 241150
Number of HSP's successfully gapped: 68
Length of query: 977
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 954
Effective length of database: 18,503,978,556
Effective search space: 17652795542424
Effective search space used: 17652795542424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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