ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93m20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9P0T4:ZN581_HUMAN Zinc finger protein 581 - Homo sapiens (Human) 34 1.6
2Q9BZY9:TRI31_HUMAN Tripartite motif-containing protein 31 - Homo... 34 2.0
3Q9LE42:HAC5_ARATH Histone acetyltransferase HAC5 - Arabidopsis t... 33 3.5
4O95201:ZN205_HUMAN Zinc finger protein 205 - Homo sapiens (Human) 32 5.9
5Q9NW07:ZN358_HUMAN Zinc finger protein 358 - Homo sapiens (Human) 32 7.7
6Q58DK7:ZN205_BOVIN Zinc finger protein 205 - Bos taurus (Bovine) 32 7.7
7P10754:ZFP13_MOUSE Zinc finger protein 13 - Mus musculus (Mouse) 32 7.7
8P26551:VE5_HPV5B Probable protein E5 - Human papillomavirus type 5b 32 7.7
9P06646:MYC_ONCMY Myc protein - Oncorhynchus mykiss (Rainbow trou... 32 7.7

>Q9P0T4:ZN581_HUMAN Zinc finger protein 581 - Homo sapiens (Human)|
          Length = 197
 Score = 34.3 bits (77), Expect = 1.6
 Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
 Frame = +1

Query: 388 TCPICLD-FPHNAVLLRCTSYEKGCRPFVCDTDKSRSNCLERFKSAHGQPVNVKVSAVNI 564
           +CP+C   F + + L R +      +PF CD       C + FK A            ++
Sbjct: 88  SCPVCSRVFEYMSYLQRHSITHSEVKPFECDI------CGKAFKRAS-----------HL 130

Query: 565 APRDSIHFISSNTNSHPACPLC-RGDVIGWAVIGEARQHLNQKKRCCEESCCSYVGNFHE 741
           A   SIH ++     H  CPLC R       +   +R H  ++   C   C       + 
Sbjct: 131 ARHHSIH-LAGGGRPH-GCPLCPRRFRDAGELAQHSRVHSGERPFQCPH-CPRRFMEQNT 187

Query: 742 LQKHTQQKHP 771
           LQKHT+ KHP
Sbjct: 188 LQKHTRWKHP 197



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>Q9BZY9:TRI31_HUMAN Tripartite motif-containing protein 31 - Homo sapiens (Human)|
          Length = 425

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 35/167 (20%), Positives = 53/167 (31%), Gaps = 22/167 (13%)
 Frame = +1

Query: 379 EDVTCPICLDFPHNAVLLRCTSY----------EKGCRPFVCDTDKSR------------ 492
           E+V CPICLD     V + C             E  C  F C   K+             
Sbjct: 12  EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIRFNSLL 71

Query: 493 SNCLERFKSAHGQPVNVKVSAVNIAPRDSIHFISSNTNSHPACPLCRGDVIGWAVIGEAR 672
            N +E+ ++     V  K           +       +    C +CR          E++
Sbjct: 72  RNLVEKIQALQASEVQSKRKEATCPRHQEMFHYFCEDDGKFLCFVCR----------ESK 121

Query: 673 QHLNQKKRCCEESCCSYVGNFHELQKHTQQKHPNSRPSEIDPARRVD 813
            H +      EE+  +Y G   E  +  QQK   +   +     RVD
Sbjct: 122 DHKSHNVSLIEEAAQNYQGQIQEQIQVLQQKEKETVQVKAQGVHRVD 168



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>Q9LE42:HAC5_ARATH Histone acetyltransferase HAC5 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 1670

 Score = 33.1 bits (74), Expect = 3.5
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
 Frame = +1

Query: 586 FISSNTNSHPACPLCRGDVIGWAVIGEARQHLNQKKRCCEESC--CSYVGNFHELQKH-- 753
           F +     H  C  C+     +    + RQ ++  K C +E+C  C +V NF E QK   
Sbjct: 644 FTAKTLLKHINC--CKAPACAYQYCHQTRQLIHHYKHCGDEACPVCVFVKNFKEKQKEKF 701

Query: 754 --TQQKHPNSR-----PSEIDPARRVDWENFQQSSDIIDVL 855
              Q+  P+S      P E   + R   E   ++  ++D L
Sbjct: 702 TFLQRAEPSSASLNHGPKESFESMRTSSERDSEAPFVVDDL 742



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>O95201:ZN205_HUMAN Zinc finger protein 205 - Homo sapiens (Human)|
          Length = 554

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
 Frame = +1

Query: 337 SSFDLDIQLDRSWTEDVTCPICL-DFPHNAVLLRCTSYEKGCRPFVCDTDKSRSNCLERF 513
           SS  +  Q+  +  +  TCP C   F H++ L++      G +P+VCD       C +RF
Sbjct: 348 SSHLIQHQIIHTGEKPYTCPACRKSFSHHSTLIQHQRIHTGEKPYVCD------RCAKRF 401

Query: 514 KSAHGQPVNVKVSAVNIAPRDSIHFISSNTNSHP-ACPLC-RGDVIGWAVIGEARQHLNQ 687
                               D +    ++T + P  CP+C +      A++   R H   
Sbjct: 402 TRR----------------SDLVTHQGTHTGAKPHKCPICAKCFTQSSALVTHQRTHTGV 445

Query: 688 KKRCCEE--SCCSYVGN-FHELQKHTQQK 765
           K   C E   C S   N     + HT +K
Sbjct: 446 KPYPCPECGKCFSQRSNLIAHNRTHTGEK 474



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>Q9NW07:ZN358_HUMAN Zinc finger protein 358 - Homo sapiens (Human)|
          Length = 481

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 9/140 (6%)
 Frame = +1

Query: 391 CPIC-LDFPHNAVLLRCTSYEKGCRPFVCDTDKS----RSNCLERFKSAHGQPVNVKVSA 555
           CP C   F H A L +      G RP+ C         RS  L+   S  G+  +     
Sbjct: 94  CPDCGKSFSHGATLAQHRGIHTGARPYQCAACGKAFGWRSTLLKHRSSHSGEKPHHCPVC 153

Query: 556 VNIAPRDSIHFISSNTNSHP---ACPLC-RGDVIGWAVIGEARQHLNQKKRCCEESCCSY 723
                  S+      T+  P    CP+C +G   G A++   R H  ++   C + C   
Sbjct: 154 GKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQ-CGKA 212

Query: 724 VGNFHELQKHTQQKHPNSRP 783
            G    L +H Q+ H   RP
Sbjct: 213 FGQSSALLQH-QRTHTAERP 231



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>Q58DK7:ZN205_BOVIN Zinc finger protein 205 - Bos taurus (Bovine)|
          Length = 550

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
 Frame = +1

Query: 337 SSFDLDIQLDRSWTEDVTCPICL-DFPHNAVLLRCTSYEKGCRPFVCDTDKSRSNCLERF 513
           SS  +  Q+  +  +  TCP C   F H++ L++      G +P+VCD       C +RF
Sbjct: 346 SSHLIQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQRIHTGEKPYVCD------RCAKRF 399

Query: 514 KSAHGQPVNVKVSAVNIAPRDSIHFISSNTNSHP-ACPLC-RGDVIGWAVIGEARQHLNQ 687
                               D +    ++T + P  CP+C +      A++   R H   
Sbjct: 400 TRR----------------SDLVTHQGTHTGAKPHKCPICGKCFTQSSALVTHQRTHTGV 443

Query: 688 KKRCCEE--SCCSYVGN-FHELQKHTQQK 765
           K   C E   C S   N     + HT +K
Sbjct: 444 KPYPCPECGKCFSQRSNLIAHNRTHTGEK 472



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>P10754:ZFP13_MOUSE Zinc finger protein 13 - Mus musculus (Mouse)|
          Length = 512

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
 Frame = +1

Query: 337 SSFDLDIQLDRSWTEDVTCPICL-DFPHNAVLLRCTSYEKGCRPFVCDTDKSRSNCLERF 513
           SS  +  Q+  +  +  TCP C   F H++ L++      G +P+VCD       C +RF
Sbjct: 306 SSHLIQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQRIHTGEKPYVCD------RCAKRF 359

Query: 514 KSAHGQPVNVKVSAVNIAPRDSIHFISSNTNSHP-ACPLC-RGDVIGWAVIGEARQHLNQ 687
                               D +    ++T + P  CP+C +      A++   R H   
Sbjct: 360 TRR----------------SDLVTHQGTHTGAKPHKCPICSKCFTQSSALVTHQRTHTGV 403

Query: 688 KKRCCEE--SCCSYVGN-FHELQKHTQQK 765
           K   C E   C S   N     + HT +K
Sbjct: 404 KPYPCPECGKCFSQRSNLIAHNRTHTGEK 432



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>P26551:VE5_HPV5B Probable protein E5 - Human papillomavirus type 5b|
          Length = 168

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 417 VREI-EADRACNVLRPAPVELYVEIERAGLHHLLHHQI 307
           V+EI  A +A  V  P PV + V ++    HHL+HHQ+
Sbjct: 30  VKEIANAAKAIKVPTPVPVSVPVALQVPNPHHLVHHQV 67



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>P06646:MYC_ONCMY Myc protein - Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)|
          Length = 414

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 27/117 (23%), Positives = 49/117 (41%)
 Frame = -1

Query: 660 DDSPTDDIASTQRASRVAVCV*RDEMDAVTGSDVNGGDLHVHRLPMSTLKPLEAVRTGLV 481
           +D    D+ + ++   V  C      D  T    +   L + R  +ST +   A      
Sbjct: 231 EDEEEIDVVTVEKRQAVKRC------DPSTSETRHHSPLVLKRCHVSTHQHNYAAHPS-- 282

Query: 480 GVAHERPATLLIRCAPQQDRVVREIEADRACNVLRPAPVELYVEIERAGLHHLLHHQ 310
              HE+PA   +R      RV+++I ++R C+  R +  E Y   ++   H++L  Q
Sbjct: 283 -TRHEQPAVKRLRLENSSSRVLKQISSNRKCSSPRTSDTEDY---DKRRTHNVLERQ 335


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 258,770,592
Number of extensions: 5481209
Number of successful extensions: 15881
Number of sequences better than 10.0: 10
Number of HSP's gapped: 15870
Number of HSP's successfully gapped: 11
Length of query: 542
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 424
Effective length of database: 68,319,629
Effective search space: 28967522696
Effective search space used: 28967522696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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