Clone Name | FLbaf90l23 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001074727.1| Oryza sativa (japonica cultivar-group) Os11g0592700 (Os11g0592700) mRNA, complete cds Length = 1659 Score = 1348 bits (680), Expect = 0.0 Identities = 1169/1332 (87%) Strand = Plus / Plus Query: 346 gagcaggcgacggcagcagcaggaggaagaggatgccgcggcggagcgcgcccggttcaa 405 ||||||||| |||||| || ||||||| ||||| |||||| ||| || || ||||||||| Sbjct: 309 gagcaggcggcggcaggaggaggaggaggaggaggccgcgccggggcacgaccggttcaa 368 Query: 406 gctcatcaacggcaaagagatatttcaagagaagacctacctagttggagtcgagtgcaa 465 ||||||||||||||| ||||| |||||||||||| | ||||| ||||| || |||||||| Sbjct: 369 gctcatcaacggcaaggagatttttcaagagaaggcatacctggttggggttgagtgcaa 428 Query: 466 gagggccacaggagataacttcagcatagaggaatcgcttaaggagctcgagcagttagc 525 |||| |||| || ||||| ||||||||||| ||| ||||||| |||||| |||| Sbjct: 429 gaggagtggaggaagtatgttcagtatagaggaatcacttgaggagctggagcagctagc 488 Query: 526 tgatactgctggactcatggttctcggatcgacctatcaaaagctttcaagtccaaatcc 585 ||||| || || ||||||||| |||| || ||||||||||||||||| | |||||||| Sbjct: 489 ggataccgccgggctcatggttgtcggctcaacctatcaaaagctttctaccccaaatcc 548 Query: 586 aaggacttatattggttcagggaaggttgctgaaattaggagtgcagttcaggcccttga 645 ||||||||||||||||||||| || ||||||||||| | ||| ||| |||| |||| ||| Sbjct: 549 aaggacttatattggttcaggcaaagttgctgaaatcaagagcgcaattcatgcccatga 608 Query: 646 tgctgagactataattttcgatgatgagttgtctgctggacagctgcgtaacttggataa 705 || ||||||| | |||||||||||||||||||| ||||||| ||||||||||||| || Sbjct: 609 tgttgagactgtgattttcgatgatgagttgtcccctggacaattgcgtaacttggagaa 668 Query: 706 gtcctttggaggaggtgttcgagtttgtgaccggactgctcttattctggacatttttaa 765 ||| ||||| || || |||||||| |||||| |||||||||||||||||||||| ||||| Sbjct: 669 gtcatttggtgggggcgttcgagtctgtgacaggactgctcttattctggacatatttaa 728 Query: 766 tcaaagggcagcgacacatgaagctgctctgcaggtcaccttggcacaaatggaatatca 825 |||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 729 ccaaagggctgcaacacatgaagctgctctacaggtcactttggcacaaatggaatatca 788 Query: 826 acttcctaggttgacaaagctgtggactcaccttgagcggcagtcaggaggccaagtcaa 885 |||||| |||||||||||| |||||| ||| ||||| || ||||||||||| |||||||| Sbjct: 789 acttccaaggttgacaaagatgtggagtcatcttgaacgacagtcaggaggtcaagtcaa 848 Query: 886 gggtatgggtgagaagcaaattgaagttgacaagcgcatcttgagaacacaaataagcac 945 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 849 gggtatgggtgagaaacaaattgaagttgacaagcgcatcttgagaacacaaataagtgc 908 Query: 946 tttgaggaaagaattggagtctgtccgaaaacatcgaaagctttatcgcaaccgtcgaca 1005 ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 909 tttaaggaaagaattggagtctgtccgaaaacatcggaagctgtaccgcaaccgtcggca 968 Query: 1006 gtcggtgcctattcctgttgtttctctggtgggatatacaaatgctggaaaaagcacact 1065 || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 969 atcagtgcctattcctgttgtttctctggtgggatatacaaatgctgggaaaagtacact 1028 Query: 1066 cttgaaccgcttaactggagctgatgtgctcgctgaggataaattatttgcgacactaga 1125 ||||||||||||||||| |||||||| || || ||||||||||| ||||| ||||| || Sbjct: 1029 gttgaaccgcttaactggggctgatgtacttgcagaggataaattgtttgccacactgga 1088 Query: 1126 cccaacaacacggagggttttgatgaagagcggcactgagttcctcctaacagatactgt 1185 ||||||||| |||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 1089 tccaacaacaaggagggttttgatgaagaatggtactgaattcctcctaacagatactgt 1148 Query: 1186 tgggttcattcagaagctacccactatgctggtagcagcatttagagcaacactagagga 1245 ||| |||||||| || |||| |||||| ||||||||||||||||||||||| | ||||| Sbjct: 1149 tggattcattcaaaaattacctactatgttggtagcagcatttagagcaacattggagga 1208 Query: 1246 gatatcagaatcatcaattattgttcatcttgtagatatcagccatcaattagctcaaca 1305 |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 1209 gatatcagaatcatcagttatagttcatcttgtagatatcagccatccgttagctcaaca 1268 Query: 1306 acagataggtgctgttgacaaagtactgaaagagctggatatagactcggttccgaagct 1365 ||||||| ||||||||||||||| |||| ||| |||||||||| || |||| ||| | Sbjct: 1269 gcagatagatgctgttgacaaagtgttgaaggagttggatatagagtcaattcccaagtt 1328 Query: 1366 ggttgtgtggaataagattgacaataccgataacccattgagagtgaaggaggaagccgc 1425 |||||| |||||||||||||||||||| ||| || || |||||||||| |||||||| | Sbjct: 1329 ggttgtatggaataagattgacaatactgatgacacactgagagtgaaagaggaagctga 1388 Query: 1426 gaaacaagggataatctgcatatccgccatgaatggtgatggtttggaagagctctgcaa 1485 |||||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||| Sbjct: 1389 gaaacaagggataatctgcatatcagccatcaatggtgatggtttggaggagttctgcaa 1448 Query: 1486 tgcaatccaagcaaagttgaaagactcactggtgctcattgaagcttttgttccgtataa 1545 |||||| ||||||||||||||||||||| |||||| || |||||||||||||| ||| | Sbjct: 1449 tgcaattcaagcaaagttgaaagactcattggtgccgatagaagcttttgttccatatga 1508 Query: 1546 caaaggggatcttttaaatgacatacatagggttggaattgttgagagaacggagtacat 1605 |||||| || || | | ||||||||| | |||||| || ||||||| ||||||||||| Sbjct: 1509 caaaggagagctcctgagtgacatacacaaggttgggatggttgagaaaacggagtacac 1568 Query: 1606 ggaaaatggcacgttgataaaagcacatgtgcctctacctcttgcgaggcttctcacgcc 1665 ||||||||| || || ||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 1569 ggaaaatggtacctttgtaaaagcgcatgtgcctctgcctcttgcaaggcttctcacgcc 1628 Query: 1666 gttgcggcagca 1677 | |||||||||| Sbjct: 1629 gctgcggcagca 1640 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 72 ccgcctccctccccctcccttccacctcc 100 ||||||| ||||||||||| ||||||||| Sbjct: 38 ccgcctcgctccccctcccctccacctcc 66
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 206 bits (104), Expect = 2e-49 Identities = 131/140 (93%) Strand = Plus / Plus Query: 798 aggtcaccttggcacaaatggaatatcaacttcctaggttgacaaagctgtggactcacc 857 ||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| | Sbjct: 56207 aggtcactttggcacaaatggaatatcaacttccaaggttgacaaagatgtggagtcatc 56266 Query: 858 ttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaattgaagttgaca 917 |||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 56267 ttgaacgacagtcaggaggtcaagtcaagggtatgggtgagaaacaaattgaagttgaca 56326 Query: 918 agcgcatcttgagaacacaa 937 |||||||||||||||||||| Sbjct: 56327 agcgcatcttgagaacacaa 56346 Score = 161 bits (81), Expect = 1e-35 Identities = 117/129 (90%) Strand = Plus / Plus Query: 1380 agattgacaataccgataacccattgagagtgaaggaggaagccgcgaaacaagggataa 1439 ||||||||||||| ||| || || |||||||||| |||||||| | |||||||||||||| Sbjct: 58253 agattgacaatactgatgacacactgagagtgaaagaggaagctgagaaacaagggataa 58312 Query: 1440 tctgcatatccgccatgaatggtgatggtttggaagagctctgcaatgcaatccaagcaa 1499 |||||||||| ||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 58313 tctgcatatcagccatcaatggtgatggtttggaggagttctgcaatgcaattcaagcaa 58372 Query: 1500 agttgaaag 1508 ||||||||| Sbjct: 58373 agttgaaag 58381 Score = 133 bits (67), Expect = 3e-27 Identities = 103/115 (89%) Strand = Plus / Plus Query: 1033 ggtgggatatacaaatgctggaaaaagcacactcttgaaccgcttaactggagctgatgt 1092 ||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 57023 ggtgggatatacaaatgctgggaaaagtacactgttgaaccgcttaactggggctgatgt 57082 Query: 1093 gctcgctgaggataaattatttgcgacactagacccaacaacacggagggttttg 1147 || || ||||||||||| ||||| ||||| || ||||||||| ||||||||||| Sbjct: 57083 acttgcagaggataaattgtttgccacactggatccaacaacaaggagggttttg 57137 Score = 127 bits (64), Expect = 2e-25 Identities = 100/112 (89%) Strand = Plus / Plus Query: 690 tgcgtaacttggataagtcctttggaggaggtgttcgagtttgtgaccggactgctctta 749 ||||||||||||| ||||| ||||| || || |||||||| |||||| |||||||||||| Sbjct: 55346 tgcgtaacttggagaagtcatttggtgggggcgttcgagtctgtgacaggactgctctta 55405 Query: 750 ttctggacatttttaatcaaagggcagcgacacatgaagctgctctgcaggt 801 |||||||||| ||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 55406 ttctggacatatttaaccaaagggctgcaacacatgaagctgctctacaggt 55457 Score = 125 bits (63), Expect = 6e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 945 ctttgaggaaagaattggagtctgtccgaaaacatcgaaagctttatcgcaaccgtcgac 1004 |||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 56849 ctttaaggaaagaattggagtctgtccgaaaacatcggaagctgtaccgcaaccgtcggc 56908 Query: 1005 agtcggtgcctattcctgttgtttctctggt 1035 | || |||||||||||||||||||||||||| Sbjct: 56909 aatcagtgcctattcctgttgtttctctggt 56939 Score = 113 bits (57), Expect = 2e-21 Identities = 90/101 (89%) Strand = Plus / Plus Query: 578 ccaaatccaaggacttatattggttcagggaaggttgctgaaattaggagtgcagttcag 637 ||||||||||||||||||||||||||||| || ||||||||||| | ||| ||| |||| Sbjct: 55123 ccaaatccaaggacttatattggttcaggcaaagttgctgaaatcaagagcgcaattcat 55182 Query: 638 gcccttgatgctgagactataattttcgatgatgagttgtc 678 |||| ||||| ||||||| | |||||||||||||||||||| Sbjct: 55183 gcccatgatgttgagactgtgattttcgatgatgagttgtc 55223 Score = 111 bits (56), Expect = 9e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1216 ggtagcagcatttagagcaacactagaggagatatcagaatcatcaattattgttcatct 1275 |||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||| Sbjct: 57665 ggtagcagcatttagagcaacattggaggagatatcagaatcatcagttatagttcatct 57724 Query: 1276 tgtagatatcag 1287 |||||||||||| Sbjct: 57725 tgtagatatcag 57736 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 1597 ggagtacatggaaaatggcacgttgataaaagcacatgtgcctctacctcttgcgaggct 1656 |||||||| ||||||||| || || ||||||| ||||||||||| |||||||| ||||| Sbjct: 58703 ggagtacacggaaaatggtacctttgtaaaagcgcatgtgcctctgcctcttgcaaggct 58762 Query: 1657 tctcacgccgttgcggcagca 1677 |||||||||| |||||||||| Sbjct: 58763 tctcacgccgctgcggcagca 58783 Score = 81.8 bits (41), Expect = 8e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 1285 cagccatcaattagctcaacaacagataggtgctgttgacaaagtactgaaagagctgga 1344 |||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||| |||| Sbjct: 57835 cagccatccgttagctcaacagcagatagatgctgttgacaaagtgttgaaggagttgga 57894 Query: 1345 tatagactcggttccgaagctggttgtgtggaataag 1381 |||||| || |||| ||| ||||||| ||||||||| Sbjct: 57895 tatagagtcaattcccaagttggttgtatggaataag 57931 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 346 gagcaggcgacggcagcagcaggaggaagaggatgccgcggcggagcgcgcccggttcaa 405 ||||||||| |||||| || ||||||| ||||| |||||| ||| || || ||||||||| Sbjct: 53885 gagcaggcggcggcaggaggaggaggaggaggaggccgcgccggggcacgaccggttcaa 53944 Query: 406 gctcatcaacggcaa 420 ||||||||||||||| Sbjct: 53945 gctcatcaacggcaa 53959 Score = 75.8 bits (38), Expect = 5e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 423 agatatttcaagagaagacctacctagttggagtcgagtgcaagagggccacaggagata 482 |||| |||||||||||| | ||||| ||||| || |||||||||||| |||| || Sbjct: 54155 agatttttcaagagaaggcatacctggttggggttgagtgcaagaggagtggaggaagta 54214 Query: 483 acttcagcatagaggaatcgcttaaggagctcgagcagttagctgatactgctggactca 542 ||||| ||||||||||| ||| ||||||| |||||| |||| ||||| || || |||| Sbjct: 54215 tgttcagtatagaggaatcacttgaggagctggagcagctagcggataccgccgggctca 54274 Query: 543 tggttctcggatcgacctatcaaaag 568 ||||| |||| || |||||||||||| Sbjct: 54275 tggttgtcggctcaacctatcaaaag 54300 Score = 65.9 bits (33), Expect = 5e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 1147 gatgaagagcggcactgagttcctcctaacagatactgttgggttcattcagaagctacc 1206 |||||||| || ||||| ||||||||||||||||||||||| |||||||| || |||| Sbjct: 57416 gatgaagaatggtactgaattcctcctaacagatactgttggattcattcaaaaattacc 57475 Query: 1207 cactatgctggta 1219 |||||| ||||| Sbjct: 57476 tactatgttggta 57488 Score = 46.1 bits (23), Expect = 0.46 Identities = 74/91 (81%) Strand = Plus / Plus Query: 1508 gactcactggtgctcattgaagcttttgttccgtataacaaaggggatcttttaaatgac 1567 |||||| |||||| || |||||||||||||| ||| ||||||| || || | | |||| Sbjct: 58478 gactcattggtgccgatagaagcttttgttccatatgacaaaggagagctcctgagtgac 58537 Query: 1568 atacatagggttggaattgttgagagaacgg 1598 ||||| | |||||| || ||||||| ||||| Sbjct: 58538 atacacaaggttgggatggttgagaaaacgg 58568 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 72 ccgcctccctccccctcccttccacctcc 100 ||||||| ||||||||||| ||||||||| Sbjct: 53614 ccgcctcgctccccctcccctccacctcc 53642
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 206 bits (104), Expect = 2e-49 Identities = 131/140 (93%) Strand = Plus / Plus Query: 798 aggtcaccttggcacaaatggaatatcaacttcctaggttgacaaagctgtggactcacc 857 ||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| | Sbjct: 21704154 aggtcactttggcacaaatggaatatcaacttccaaggttgacaaagatgtggagtcatc 21704213 Query: 858 ttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaattgaagttgaca 917 |||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 21704214 ttgaacgacagtcaggaggtcaagtcaagggtatgggtgagaaacaaattgaagttgaca 21704273 Query: 918 agcgcatcttgagaacacaa 937 |||||||||||||||||||| Sbjct: 21704274 agcgcatcttgagaacacaa 21704293 Score = 161 bits (81), Expect = 1e-35 Identities = 117/129 (90%) Strand = Plus / Plus Query: 1380 agattgacaataccgataacccattgagagtgaaggaggaagccgcgaaacaagggataa 1439 ||||||||||||| ||| || || |||||||||| |||||||| | |||||||||||||| Sbjct: 21706200 agattgacaatactgatgacacactgagagtgaaagaggaagctgagaaacaagggataa 21706259 Query: 1440 tctgcatatccgccatgaatggtgatggtttggaagagctctgcaatgcaatccaagcaa 1499 |||||||||| ||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 21706260 tctgcatatcagccatcaatggtgatggtttggaggagttctgcaatgcaattcaagcaa 21706319 Query: 1500 agttgaaag 1508 ||||||||| Sbjct: 21706320 agttgaaag 21706328 Score = 133 bits (67), Expect = 3e-27 Identities = 103/115 (89%) Strand = Plus / Plus Query: 1033 ggtgggatatacaaatgctggaaaaagcacactcttgaaccgcttaactggagctgatgt 1092 ||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 21704970 ggtgggatatacaaatgctgggaaaagtacactgttgaaccgcttaactggggctgatgt 21705029 Query: 1093 gctcgctgaggataaattatttgcgacactagacccaacaacacggagggttttg 1147 || || ||||||||||| ||||| ||||| || ||||||||| ||||||||||| Sbjct: 21705030 acttgcagaggataaattgtttgccacactggatccaacaacaaggagggttttg 21705084 Score = 127 bits (64), Expect = 2e-25 Identities = 100/112 (89%) Strand = Plus / Plus Query: 690 tgcgtaacttggataagtcctttggaggaggtgttcgagtttgtgaccggactgctctta 749 ||||||||||||| ||||| ||||| || || |||||||| |||||| |||||||||||| Sbjct: 21703293 tgcgtaacttggagaagtcatttggtgggggcgttcgagtctgtgacaggactgctctta 21703352 Query: 750 ttctggacatttttaatcaaagggcagcgacacatgaagctgctctgcaggt 801 |||||||||| ||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 21703353 ttctggacatatttaaccaaagggctgcaacacatgaagctgctctacaggt 21703404 Score = 125 bits (63), Expect = 6e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 945 ctttgaggaaagaattggagtctgtccgaaaacatcgaaagctttatcgcaaccgtcgac 1004 |||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 21704796 ctttaaggaaagaattggagtctgtccgaaaacatcggaagctgtaccgcaaccgtcggc 21704855 Query: 1005 agtcggtgcctattcctgttgtttctctggt 1035 | || |||||||||||||||||||||||||| Sbjct: 21704856 aatcagtgcctattcctgttgtttctctggt 21704886 Score = 113 bits (57), Expect = 2e-21 Identities = 90/101 (89%) Strand = Plus / Plus Query: 578 ccaaatccaaggacttatattggttcagggaaggttgctgaaattaggagtgcagttcag 637 ||||||||||||||||||||||||||||| || ||||||||||| | ||| ||| |||| Sbjct: 21703070 ccaaatccaaggacttatattggttcaggcaaagttgctgaaatcaagagcgcaattcat 21703129 Query: 638 gcccttgatgctgagactataattttcgatgatgagttgtc 678 |||| ||||| ||||||| | |||||||||||||||||||| Sbjct: 21703130 gcccatgatgttgagactgtgattttcgatgatgagttgtc 21703170 Score = 111 bits (56), Expect = 9e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1216 ggtagcagcatttagagcaacactagaggagatatcagaatcatcaattattgttcatct 1275 |||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||| Sbjct: 21705612 ggtagcagcatttagagcaacattggaggagatatcagaatcatcagttatagttcatct 21705671 Query: 1276 tgtagatatcag 1287 |||||||||||| Sbjct: 21705672 tgtagatatcag 21705683 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 1597 ggagtacatggaaaatggcacgttgataaaagcacatgtgcctctacctcttgcgaggct 1656 |||||||| ||||||||| || || ||||||| ||||||||||| |||||||| ||||| Sbjct: 21706650 ggagtacacggaaaatggtacctttgtaaaagcgcatgtgcctctgcctcttgcaaggct 21706709 Query: 1657 tctcacgccgttgcggcagca 1677 |||||||||| |||||||||| Sbjct: 21706710 tctcacgccgctgcggcagca 21706730 Score = 81.8 bits (41), Expect = 8e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 1285 cagccatcaattagctcaacaacagataggtgctgttgacaaagtactgaaagagctgga 1344 |||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||| |||| Sbjct: 21705782 cagccatccgttagctcaacagcagatagatgctgttgacaaagtgttgaaggagttgga 21705841 Query: 1345 tatagactcggttccgaagctggttgtgtggaataag 1381 |||||| || |||| ||| ||||||| ||||||||| Sbjct: 21705842 tatagagtcaattcccaagttggttgtatggaataag 21705878 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 346 gagcaggcgacggcagcagcaggaggaagaggatgccgcggcggagcgcgcccggttcaa 405 ||||||||| |||||| || ||||||| ||||| |||||| ||| || || ||||||||| Sbjct: 21701832 gagcaggcggcggcaggaggaggaggaggaggaggccgcgccggggcacgaccggttcaa 21701891 Query: 406 gctcatcaacggcaa 420 ||||||||||||||| Sbjct: 21701892 gctcatcaacggcaa 21701906 Score = 75.8 bits (38), Expect = 5e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 423 agatatttcaagagaagacctacctagttggagtcgagtgcaagagggccacaggagata 482 |||| |||||||||||| | ||||| ||||| || |||||||||||| |||| || Sbjct: 21702102 agatttttcaagagaaggcatacctggttggggttgagtgcaagaggagtggaggaagta 21702161 Query: 483 acttcagcatagaggaatcgcttaaggagctcgagcagttagctgatactgctggactca 542 ||||| ||||||||||| ||| ||||||| |||||| |||| ||||| || || |||| Sbjct: 21702162 tgttcagtatagaggaatcacttgaggagctggagcagctagcggataccgccgggctca 21702221 Query: 543 tggttctcggatcgacctatcaaaag 568 ||||| |||| || |||||||||||| Sbjct: 21702222 tggttgtcggctcaacctatcaaaag 21702247 Score = 65.9 bits (33), Expect = 5e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 1147 gatgaagagcggcactgagttcctcctaacagatactgttgggttcattcagaagctacc 1206 |||||||| || ||||| ||||||||||||||||||||||| |||||||| || |||| Sbjct: 21705363 gatgaagaatggtactgaattcctcctaacagatactgttggattcattcaaaaattacc 21705422 Query: 1207 cactatgctggta 1219 |||||| ||||| Sbjct: 21705423 tactatgttggta 21705435 Score = 46.1 bits (23), Expect = 0.46 Identities = 74/91 (81%) Strand = Plus / Plus Query: 1508 gactcactggtgctcattgaagcttttgttccgtataacaaaggggatcttttaaatgac 1567 |||||| |||||| || |||||||||||||| ||| ||||||| || || | | |||| Sbjct: 21706425 gactcattggtgccgatagaagcttttgttccatatgacaaaggagagctcctgagtgac 21706484 Query: 1568 atacatagggttggaattgttgagagaacgg 1598 ||||| | |||||| || ||||||| ||||| Sbjct: 21706485 atacacaaggttgggatggttgagaaaacgg 21706515 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 72 ccgcctccctccccctcccttccacctcc 100 ||||||| ||||||||||| ||||||||| Sbjct: 21701561 ccgcctcgctccccctcccctccacctcc 21701589
>ref|NM_125181.3| Arabidopsis thaliana GTP binding (AT5G57960) mRNA, complete cds Length = 1977 Score = 77.8 bits (39), Expect = 1e-10 Identities = 72/83 (86%) Strand = Plus / Plus Query: 846 tgtggactcaccttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaa 905 |||||||||| |||||||| || || || |||||||| ||||||||||| || || |||| Sbjct: 774 tgtggactcatcttgagcgtcaatctggtggccaagttaagggtatgggagaaaaacaaa 833 Query: 906 ttgaagttgacaagcgcatcttg 928 |||||||||| ||||| |||||| Sbjct: 834 ttgaagttgataagcgaatcttg 856 Score = 71.9 bits (36), Expect = 8e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 690 tgcgtaacttggataagtcctttggaggaggtgttcgagtttgtgaccggactgctctta 749 |||||||| |||| ||| ||||||| || | |||||||||||||||||| || || |||| Sbjct: 618 tgcgtaacctggaaaaggcctttggtggggatgttcgagtttgtgaccgcaccgccctta 677 Query: 750 ttctggacatttttaatcaaagggcagcgacacatgaagc 789 | |||||||||| || |||||||| || || |||||||| Sbjct: 678 tcttggacattttcaaccaaagggccgcaactcatgaagc 717
>gb|AY052351.1| Arabidopsis thaliana AT5g57960/MTI20_22 mRNA sequence Length = 2253 Score = 77.8 bits (39), Expect = 1e-10 Identities = 72/83 (86%) Strand = Plus / Plus Query: 846 tgtggactcaccttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaa 905 |||||||||| |||||||| || || || |||||||| ||||||||||| || || |||| Sbjct: 802 tgtggactcatcttgagcgtcaatctggtggccaagttaagggtatgggagaaaaacaaa 861 Query: 906 ttgaagttgacaagcgcatcttg 928 |||||||||| ||||| |||||| Sbjct: 862 ttgaagttgataagcgaatcttg 884 Score = 71.9 bits (36), Expect = 8e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 690 tgcgtaacttggataagtcctttggaggaggtgttcgagtttgtgaccggactgctctta 749 |||||||| |||| ||| ||||||| || | |||||||||||||||||| || || |||| Sbjct: 646 tgcgtaacctggaaaaggcctttggtggggatgttcgagtttgtgaccgcaccgccctta 705 Query: 750 ttctggacatttttaatcaaagggcagcgacacatgaagc 789 | |||||||||| || |||||||| || || |||||||| Sbjct: 706 tcttggacattttcaaccaaagggccgcaactcatgaagc 745
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 77.8 bits (39), Expect = 1e-10 Identities = 72/83 (86%) Strand = Plus / Minus Query: 846 tgtggactcaccttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaa 905 |||||||||| |||||||| || || || |||||||| ||||||||||| || || |||| Sbjct: 61768 tgtggactcatcttgagcgtcaatctggtggccaagttaagggtatgggagaaaaacaaa 61709 Query: 906 ttgaagttgacaagcgcatcttg 928 |||||||||| ||||| |||||| Sbjct: 61708 ttgaagttgataagcgaatcttg 61686 Score = 71.9 bits (36), Expect = 8e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 690 tgcgtaacttggataagtcctttggaggaggtgttcgagtttgtgaccggactgctctta 749 |||||||| |||| ||| ||||||| || | |||||||||||||||||| || || |||| Sbjct: 62017 tgcgtaacctggaaaaggcctttggtggggatgttcgagtttgtgaccgcaccgccctta 61958 Query: 750 ttctggacatttttaatcaaagggcagcgacacatgaagc 789 | |||||||||| || |||||||| || || |||||||| Sbjct: 61957 tcttggacattttcaaccaaagggccgcaactcatgaagc 61918
>emb|BX830800.1|CNS0A28V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZG08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1962 Score = 71.9 bits (36), Expect = 8e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 690 tgcgtaacttggataagtcctttggaggaggtgttcgagtttgtgaccggactgctctta 749 |||||||| |||| ||| ||||||| || | |||||||||||||||||| || || |||| Sbjct: 618 tgcgtaacctggaaaaggcctttggtggggatgttcgagtttgtgaccgcaccgccctta 677 Query: 750 ttctggacatttttaatcaaagggcagcgacacatgaagc 789 | |||||||||| || |||||||| || || |||||||| Sbjct: 678 tcttggacattttcaaccaaagggccgcaactcatgaagc 717 Score = 56.0 bits (28), Expect = 5e-04 Identities = 66/76 (86%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 846 tgtggactcaccttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaa 905 |||||||||| |||||||| || || || |||||||| ||||||||||| ||||| |||| Sbjct: 774 tgtggactcatcttgagcgtcaatctggtggccaagttaagggtatgggagagaa-caaa 832 Query: 906 ttgaagttgacaagcg 921 ||||||||| ||||| Sbjct: 833 -tgaagttgataagcg 847
>gb|BT013605.1| Lycopersicon esculentum clone 132373F, mRNA sequence Length = 2186 Score = 65.9 bits (33), Expect = 5e-07 Identities = 174/221 (78%) Strand = Plus / Plus Query: 1019 cctgttgtttctctggtgggatatacaaatgctggaaaaagcacactcttgaaccgctta 1078 |||||||| ||| |||| ||||| |||||||| |||||||| ||||| | |||| || Sbjct: 997 cctgttgtatctttggttggatacacaaatgccggaaaaagtacacttcttaaccagttg 1056 Query: 1079 actggagctgatgtgctcgctgaggataaattatttgcgacactagacccaacaacacgg 1138 ||||| |||||||| || || |||||| ||||||| || ||||| || || || ||| | Sbjct: 1057 actggggctgatgttcttgccgaggatcaattattcgctacacttgatcctactacaaga 1116 Query: 1139 agggttttgatgaagagcggcactgagttcctcctaacagatactgttgggttcattcag 1198 ||||| |||||||| || | |||||||| || |||||||||||||| ||||| || Sbjct: 1117 agggtgcagatgaagaatgggaaggagttcctgcttacagatactgttggcttcatccaa 1176 Query: 1199 aagctacccactatgctggtagcagcatttagagcaacact 1239 || |||| || | ||||| ||||| ||||| |||||||| Sbjct: 1177 aaattaccgacaactctggttgcagcctttagggcaacact 1217 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 846 tgtggactcaccttgagcggcagtcaggaggccaagtcaagggtatgggtgagaagcaaa 905 ||||||||||||||||||| || | ||||| || ||||||||||||||||| || || | Sbjct: 824 tgtggactcaccttgagcgtcaagctggagggcaggtcaagggtatgggtgaaaaacaga 883 Query: 906 ttgaagttgacaag 919 | ||||| |||||| Sbjct: 884 tcgaagtagacaag 897
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagaggatgc 381 |||||||||||||||||||||||| Sbjct: 29680138 gcagcagcaggaggaagaggatgc 29680115 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1248 tatcagaatcatcaattattg 1268 ||||||||||||||||||||| Sbjct: 8070029 tatcagaatcatcaattattg 8070049
>emb|AL596168.1| Listeria innocua Clip11262 complete genome, segment 6/12 Length = 333050 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1100 gaggataaattatttgcgacactagacccaacaaca 1135 ||||||||||||||||| ||||| || ||||||||| Sbjct: 114084 gaggataaattatttgcaacactcgatccaacaaca 114119
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagaggatgc 381 |||||||||||||||||||||||| Sbjct: 111346 gcagcagcaggaggaagaggatgc 111323
>gb|DQ213661.1| Taeniopygia guttata clone 0058P0029A04 thioesterase superfamily member 2 (PNAS-27)-like mRNA, complete sequence Length = 1239 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagaggatg 380 ||||||||||||||||||||||| Sbjct: 132 gcagcagcaggaggaagaggatg 110
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 tcccttccacctccaccgctgcc 109 ||||||||||||||||||||||| Sbjct: 7198 tcccttccacctccaccgctgcc 7220
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 tcccttccacctccaccgctgcc 109 ||||||||||||||||||||||| Sbjct: 21550572 tcccttccacctccaccgctgcc 21550594 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 19180247 gcagcagcaggaggaagagga 19180227 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 tggtgtcggtgagatagaaga 273 ||||||||||||||||||||| Sbjct: 21723152 tggtgtcggtgagatagaaga 21723132
>gb|AC156594.2| Laccaria bicolor clone JGIAHZW-13X, complete sequence Length = 31541 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Minus Query: 80 ctccccctcccttccacctccac 102 ||||||||||||||||||||||| Sbjct: 10082 ctccccctcccttccacctccac 10060
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 tcccttccacctccaccgctgcc 109 ||||||||||||||||||||||| Sbjct: 112182 tcccttccacctccaccgctgcc 112204
>ref|XM_001057012.1| PREDICTED: Rattus norvegicus acyltransferase like 2 (predicted), transcript variant 1 (Aytl2_predicted), mRNA Length = 3422 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 gatgagagtggtgtcggtgagataga 270 ||||||||||||| |||||||||||| Sbjct: 1127 gatgagagtggtggcggtgagataga 1152
>ref|XM_001057066.1| PREDICTED: Rattus norvegicus acyltransferase like 2 (predicted), transcript variant 2 (Aytl2_predicted), mRNA Length = 3624 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 gatgagagtggtgtcggtgagataga 270 ||||||||||||| |||||||||||| Sbjct: 1329 gatgagagtggtggcggtgagataga 1354
>ref|XM_341747.3| PREDICTED: Rattus norvegicus acyltransferase like 2 (predicted) (Aytl2_predicted), mRNA Length = 3633 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 gatgagagtggtgtcggtgagataga 270 ||||||||||||| |||||||||||| Sbjct: 1336 gatgagagtggtggcggtgagataga 1361
>dbj|AB244983.2| Rattus norvegicus lpcat mRNA for LPC acyltransferase, partial cds Length = 1470 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 gatgagagtggtgtcggtgagataga 270 ||||||||||||| |||||||||||| Sbjct: 1039 gatgagagtggtggcggtgagataga 1064
>gb|AC126598.13| Mus musculus chromosome 5, clone RP24-486L9, complete sequence Length = 168471 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 52809 cctccctccccctcccttccccctcc 52834
>gb|AC132575.3| Mus musculus BAC clone RP24-425F2 from chromosome 16, complete sequence Length = 139828 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 122819 cctccctccccctcccttcctcctcc 122844
>gb|AC125458.3| Mus musculus BAC clone RP24-236M19 from chromosome 19, complete sequence Length = 184015 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 96479 cctccctccccctcccttcctcctcc 96454
>gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, complete sequence Length = 217813 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 ctccctccccctcccttccacc 97 |||||||||||||||||||||| Sbjct: 140846 ctccctccccctcccttccacc 140825
>gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, complete sequence Length = 168821 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 55145 cctccctccccctcccttccccctcc 55120
>ref|XM_683231.1| PREDICTED: Danio rerio similar to TAP binding protein-like (LOC559844), mRNA Length = 1853 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 351 ggcgacggcagcagcaggaggaagag 376 ||||| |||||||||||||||||||| Sbjct: 1447 ggcgaaggcagcagcaggaggaagag 1422
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence Length = 181174 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 gccatgagagccgctggcttctcctt 60 ||||||||||| |||||||||||||| Sbjct: 104889 gccatgagagcggctggcttctcctt 104914
>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the 3' end of the Col23a1 gene for procollagen (type XXIII, alpha 1), the 5' end of a novel gene and a CpG island, complete sequence Length = 155917 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 107304 cctccctccccctcccttccccctcc 107329
>emb|CR457447.5| Zebrafish DNA sequence from clone CH211-108P6 in linkage group 15, complete sequence Length = 122848 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 351 ggcgacggcagcagcaggaggaagag 376 ||||| |||||||||||||||||||| Sbjct: 52102 ggcgaaggcagcagcaggaggaagag 52127
>gb|AC087799.43| Mus musculus strain C57BL/6J chromosome 16 clone rp23-198m10, complete sequence Length = 208011 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 174911 cctccctccccctcccttcctcctcc 174886
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1024 tgtttctctggtgggatatacaaatgctggaaaa 1057 ||||||| | || ||||||||||||||||||||| Sbjct: 98523 tgtttctttagtaggatatacaaatgctggaaaa 98556
>emb|BX000431.10| Zebrafish DNA sequence from clone DKEY-14B11 in linkage group 15, complete sequence Length = 200161 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 351 ggcgacggcagcagcaggaggaagag 376 ||||| |||||||||||||||||||| Sbjct: 197646 ggcgaaggcagcagcaggaggaagag 197621
>emb|AL137226.3|CNS01DWI Human chromosome 14 DNA sequence BAC R-356A6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208391 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 ggcaaagagatatttcaagaga 437 |||||||||||||||||||||| Sbjct: 82469 ggcaaagagatatttcaagaga 82490
>gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, complete sequence Length = 165443 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 cctccctccccctcccttccacctcc 100 |||||||||||||||||||| ||||| Sbjct: 24398 cctccctccccctcccttccccctcc 24423
>ref|XM_418271.2| PREDICTED: Gallus gallus fem-1 homolog a (C.elegans) (FEM1A), mRNA Length = 4529 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 gcagcaggaggaagaggatgc 381 ||||||||||||||||||||| Sbjct: 735 gcagcaggaggaagaggatgc 755
>dbj|AK234609.1| Sus scrofa mRNA, clone:OVR010095E02, expressed in ovary Length = 2016 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 868 gcagcagcaggaggaagagga 848
>ref|NM_001070128.1| Oryza sativa (japonica cultivar-group) Os09g0503400 (Os09g0503400) mRNA, complete cds Length = 3372 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 49 gcagcagcaggaggaagagga 29
>ref|NM_001064405.1| Oryza sativa (japonica cultivar-group) Os06g0560700 (Os06g0560700) mRNA, complete cds Length = 1349 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 90 gcagcagcaggaggaagagga 70
>emb|AL590842.1| Yersinia pestis CO92 complete genome Length = 4653728 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 4110664 gttcaggcccttgatgctgag 4110684
>gb|AE017042.1| Yersinia pestis biovar Microtus str. 91001, complete genome Length = 4595065 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 4394375 gttcaggcccttgatgctgag 4394355
>emb|CT573269.3| CH251-10A4, complete sequence Length = 182674 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 781 acatgaagctgctctgcaggt 801 ||||||||||||||||||||| Sbjct: 136455 acatgaagctgctctgcaggt 136435
>gb|CP000308.1| Yersinia pestis Antiqua, complete genome Length = 4702289 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 4145714 gttcaggcccttgatgctgag 4145734
>gb|CP000305.1| Yersinia pestis Nepal516, complete genome Length = 4534590 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 3979438 gttcaggcccttgatgctgag 3979418
>gb|AC186559.1| Gasterosteus aculeatus clone VMRC26-231K03, complete sequence Length = 150088 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ccttccacctccaccgctgcc 109 ||||||||||||||||||||| Sbjct: 31631 ccttccacctccaccgctgcc 31651
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 192627 gttcaggcccttgatgctgag 192607
>gb|DQ246217.1| Leishmania donovani prohibitin mRNA, complete cds Length = 807 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ccacctccaccgctgcctcga 113 ||||||||||||||||||||| Sbjct: 730 ccacctccaccgctgcctcga 710
>gb|AC159991.9| Mus musculus chromosome 1, clone RP23-413H17, complete sequence Length = 180715 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 gttagctgatactgctggact 540 ||||||||||||||||||||| Sbjct: 96631 gttagctgatactgctggact 96611
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 111178 gcagcagcaggaggaagagga 111158
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 tggtgtcggtgagatagaaga 273 ||||||||||||||||||||| Sbjct: 69172 tggtgtcggtgagatagaaga 69152
>gb|AC131303.8| Mus musculus chromosome 1, clone RP24-119O19, complete sequence Length = 187110 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 gaaagggagggaagagatggggagg 305 ||||||||||||||||| ||||||| Sbjct: 46531 gaaagggagggaagagagggggagg 46555 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 gaaagggagggaagagatggggagg 305 ||||||||||||||||| ||||||| Sbjct: 50221 gaaagggagggaagagagggggagg 50197
>gb|AY545599.3| Yersinia pseudotuberculosis putative tc locus, complete sequence Length = 11421 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 5181 gttcaggcccttgatgctgag 5201
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217046 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 ctccctccccctcccttccacctcc 100 ||||||||||||||||||| ||||| Sbjct: 16293 ctccctccccctcccttccccctcc 16317
>gb|AF423366.1| Uncultured Chloroflexi bacterium isolate DGGE band L2 16S ribosomal RNA gene, partial sequence Length = 535 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 gttagctgatactgctggact 540 ||||||||||||||||||||| Sbjct: 263 gttagctgatactgctggact 283
>gb|AC111113.17| Mus musculus chromosome 1, clone RP23-205B8, complete sequence Length = 201485 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 ctccctccccctcccttccacctcc 100 ||||||||||||||||||| ||||| Sbjct: 80058 ctccctccccctcccttccccctcc 80034
>gb|AC110164.26| Mus musculus chromosome 3, clone RP23-167C5, complete sequence Length = 199235 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1311 taggtgctgttgacaaagtac 1331 ||||||||||||||||||||| Sbjct: 172123 taggtgctgttgacaaagtac 172143
>gb|AC125325.4| Mus musculus BAC clone RP23-296K22 from chromosome 9, complete sequence Length = 156124 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ctccctccccctcccttccac 96 ||||||||||||||||||||| Sbjct: 96712 ctccctccccctcccttccac 96732
>ref|XM_843747.1| PREDICTED: Canis familiaris similar to mitochondrial coiled-coil domain 1 (LOC607150), mRNA Length = 413 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 gagcaggcgacggcagcagcaggag 370 |||||||||||||||||| |||||| Sbjct: 82 gagcaggcgacggcagcaacaggag 58
>gb|AC132141.3| Mus musculus BAC clone RP23-55P19 from chromosome 15, complete sequence Length = 168586 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 tcaagtccaaatccaaggact 592 ||||||||||||||||||||| Sbjct: 69668 tcaagtccaaatccaaggact 69648
>gb|AC123556.4| Mus musculus BAC clone RP23-176M9 from 1, complete sequence Length = 198900 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 gaaagggagggaagagatggggagg 305 ||||||||||||||||| ||||||| Sbjct: 71608 gaaagggagggaagagagggggagg 71632 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 gaaagggagggaagagatggggagg 305 ||||||||||||||||| ||||||| Sbjct: 75298 gaaagggagggaagagagggggagg 75274
>gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, complete sequence Length = 191935 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 agcagcaggaggaagaggatg 380 ||||||||||||||||||||| Sbjct: 182626 agcagcaggaggaagaggatg 182606
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 cctccccctcccttccacctccacc 103 |||||||||||||||| |||||||| Sbjct: 115847 cctccccctcccttccccctccacc 115871
>gb|BC037213.1| Homo sapiens cDNA clone IMAGE:4829494 Length = 2584 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1823 ttaacaataaagaaaaataca 1843 ||||||||||||||||||||| Sbjct: 2495 ttaacaataaagaaaaataca 2515
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 357 ggcagcagcaggaggaagaggatgc 381 |||||||||||||||| |||||||| Sbjct: 58846 ggcagcagcaggaggaggaggatgc 58822
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 357 ggcagcagcaggaggaagaggatgc 381 |||||||||||||||| |||||||| Sbjct: 142493 ggcagcagcaggaggaggaggatgc 142469
>dbj|AK157593.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830225F22 product:unclassifiable, full insert sequence Length = 3060 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1565 gacatacatagggttggaattgttg 1589 ||||||||||||| ||||||||||| Sbjct: 840 gacatacatagggatggaattgttg 816
>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence Length = 215410 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1565 gacatacatagggttggaattgttg 1589 ||||||||||||| ||||||||||| Sbjct: 120252 gacatacatagggatggaattgttg 120228
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 357 ggcagcagcaggaggaagaggatgc 381 |||||||||||||||| |||||||| Sbjct: 18936195 ggcagcagcaggaggaggaggatgc 18936219
>emb|CR658704.2|CNS0F786 Tetraodon nigroviridis full-length cDNA Length = 1802 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 794 gcagcagcaggaggaagagga 814
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccgccgcctccctccccctcc 89 ||||||||||||||||||||| Sbjct: 20444101 ccgccgcctccctccccctcc 20444081 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 21100043 gcagcagcaggaggaagagga 21100023
>emb|AL929387.7| Human DNA sequence from clone RP11-398F12 on chromosome 22, complete sequence Length = 24787 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1823 ttaacaataaagaaaaataca 1843 ||||||||||||||||||||| Sbjct: 16119 ttaacaataaagaaaaataca 16099
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 ctccctccccctcccttccacctcc 100 ||||||||||||||||||| ||||| Sbjct: 66139 ctccctccccctcccttcctcctcc 66163
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence Length = 203908 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcctccctccccctcccttcc 94 ||||||||||||||||||||| Sbjct: 98184 gcctccctccccctcccttcc 98204
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 gttcaggcccttgatgctgag 652 ||||||||||||||||||||| Sbjct: 4223770 gttcaggcccttgatgctgag 4223750
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1247 atatcagaatcatcaattatt 1267 ||||||||||||||||||||| Sbjct: 500756 atatcagaatcatcaattatt 500776
>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence Length = 150102 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 gagcaggcgacggcagcagcaggag 370 |||||||||||||||||| |||||| Sbjct: 102809 gagcaggcgacggcagcaacaggag 102785
>emb|AL606488.15| Mouse DNA sequence from clone RP23-90E8 on chromosome 13 Contains part of a novel gene, complete sequence Length = 188423 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 134961 gcagcagcaggaggaagagga 134941
>gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete sequence Length = 237678 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ctccctccccctcccttccac 96 ||||||||||||||||||||| Sbjct: 232391 ctccctccccctcccttccac 232371
>gb|AC156800.2| Mus musculus BAC clone RP23-366B23 from chromosome 9, complete sequence Length = 190619 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ctccctccccctcccttccac 96 ||||||||||||||||||||| Sbjct: 18983 ctccctccccctcccttccac 18963
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1248 tatcagaatcatcaattattg 1268 ||||||||||||||||||||| Sbjct: 3624 tatcagaatcatcaattattg 3644
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1248 tatcagaatcatcaattattg 1268 ||||||||||||||||||||| Sbjct: 139557 tatcagaatcatcaattattg 139577
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 97044 gcagcagcaggaggaagagga 97024
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccgccgcctccctccccctcc 89 ||||||||||||||||||||| Sbjct: 16396 ccgccgcctccctccccctcc 16376
>dbj|AP006700.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H09, TM0550, complete sequence Length = 76403 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1256 tcatcaattattgttcatctt 1276 ||||||||||||||||||||| Sbjct: 64335 tcatcaattattgttcatctt 64315
>dbj|AP006688.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L14, TM0383, complete sequence Length = 81488 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1256 tcatcaattattgttcatctt 1276 ||||||||||||||||||||| Sbjct: 28625 tcatcaattattgttcatctt 28645
>dbj|AP006686.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18K09, TM0380, complete sequence Length = 88931 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1256 tcatcaattattgttcatctt 1276 ||||||||||||||||||||| Sbjct: 28286 tcatcaattattgttcatctt 28266
>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full insert sequence Length = 3669 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 50 gcagcagcaggaggaagagga 30
>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full insert sequence Length = 3673 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 50 gcagcagcaggaggaagagga 30
>dbj|AK065442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013009J14, full insert sequence Length = 4128 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1248 tatcagaatcatcaattattg 1268 ||||||||||||||||||||| Sbjct: 2060 tatcagaatcatcaattattg 2040
>dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A03, full insert sequence Length = 1349 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 90 gcagcagcaggaggaagagga 70
>dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39H01, TM0172, complete sequence Length = 127731 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1256 tcatcaattattgttcatctt 1276 ||||||||||||||||||||| Sbjct: 119094 tcatcaattattgttcatctt 119114
>ref|XM_447931.1| Candida glabrata CBS138, CAGL0J05214g partial mRNA Length = 2151 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1247 atatcagaatcatcaattatt 1267 ||||||||||||||||||||| Sbjct: 1190 atatcagaatcatcaattatt 1170
>gb|AC093452.50| Mus musculus strain C57BL/6J clone rp23-458j13 map 1, complete sequence Length = 199859 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcagcagcaggaggaagagga 378 ||||||||||||||||||||| Sbjct: 65298 gcagcagcaggaggaagagga 65278
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence Length = 214840 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 ctccctccccctcccttccacctcc 100 ||||||||||||||||||| ||||| Sbjct: 98011 ctccctccccctcccttccccctcc 98035
>gb|AC161420.6| Mus musculus BAC clone RP24-358O9 from chromosome 1, complete sequence Length = 200763 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 ctccctccccctcccttccacctcc 100 ||||||||||||||||||| ||||| Sbjct: 31967 ctccctccccctcccttccccctcc 31943
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 tcggtgagatagaagacggcg 278 ||||||||||||||||||||| Sbjct: 236483 tcggtgagatagaagacggcg 236503
>emb|BX276129.7| Mouse DNA sequence from clone RP23-213F21 on chromosome X, complete sequence Length = 77618 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1565 gacatacatagggttggaattgttg 1589 ||||||||||||| ||||||||||| Sbjct: 32485 gacatacatagggatggaattgttg 32509
>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete sequence Length = 190466 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 667 tgatgagttgtctgctggacagctg 691 |||||||||||| |||||||||||| Sbjct: 143155 tgatgagttgtcagctggacagctg 143179
>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194042 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 ctccctccccctcccttccacctcc 100 ||||||||||||||||||| ||||| Sbjct: 33911 ctccctccccctcccttccccctcc 33887
>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete sequence Length = 182829 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1595 acggagtacatggaaaatggc 1615 ||||||||||||||||||||| Sbjct: 124460 acggagtacatggaaaatggc 124440
>emb|AL137569.1|HSM802313 Homo sapiens mRNA; cDNA DKFZp586K1721 (from clone DKFZp586K1721) Length = 4163 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1823 ttaacaataaagaaaaataca 1843 ||||||||||||||||||||| Sbjct: 3703 ttaacaataaagaaaaataca 3723
>gb|AC153512.2| Mus musculus 10 BAC RP23-18K14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209885 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 cctccctccccctcccttccacctccacc 103 |||||||||| ||||| |||||||||||| Sbjct: 130902 cctccctccctctcccctccacctccacc 130874
>dbj|AB025543.1| Lampetra reissneri mRNA for EphC, partial cds Length = 1122 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1594 aacggagtacatggaaaatgg 1614 ||||||||||||||||||||| Sbjct: 196 aacggagtacatggaaaatgg 216 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 341,684,217 Number of extensions: 18441744 Number of successful extensions: 400426 Number of sequences better than 10.0: 102 Number of HSP's gapped: 400424 Number of HSP's successfully gapped: 143 Length of query: 1894 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1871 Effective length of database: 18,503,978,556 Effective search space: 34620943878276 Effective search space used: 34620943878276 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)