ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88d18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK072950:Os11g0538900 788 0.0
2AF302906:Os02g0194100 787 0.0
3AK120755:Os02g0232400 107 4e-23
4AK058734:Os02g0232400 85 2e-16
5AK110061: 33 1.1
6Os04g0677700:Os04g0677700 32 1.5
7AK106359:Os01g0201900 30 9.7
8AK073519:Os01g0815700 30 9.7 
>AK072950:Os11g0538900 |
          Length = 472
 Score =  788 bits (2035), Expect = 0.0
 Identities = 385/421 (91%), Positives = 399/421 (94%)
 Frame = +1

Query: 724  QDRLKKLKSEHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPEEGIRFRGLSIPECQKV 903
            QDRLKKLKSEHGKVQLGNITVDMVLGGMRGM GMLWETSLLDPEEGIRFRGLSIPECQKV
Sbjct: 52   QDRLKKLKSEHGKVQLGNITVDMVLGGMRGMIGMLWETSLLDPEEGIRFRGLSIPECQKV 111

Query: 904  LPAAVKDXXXXXXXXXXXXXTGKVPTKEQVDALSKELLSRSTVPGYVYKAIDALPVTAHP 1083
            LP A+K              TGKVPTKEQVDALSKEL++RS+VPG+VYKAIDALPVTAHP
Sbjct: 112  LPTAIKGGEPLPEGLLWLLLTGKVPTKEQVDALSKELVTRSSVPGHVYKAIDALPVTAHP 171

Query: 1084 MTQFTTGVMALQVDSEFQKAYDKGMPKTKFWEPTYEDCLNLIARLPQVASYVYRRIFKDG 1263
            MTQFTTGVMALQV+SEFQKAYDKGMPK+KFWEPTYEDCLNLIARLP VASYVYRRIFKDG
Sbjct: 172  MTQFTTGVMALQVESEFQKAYDKGMPKSKFWEPTYEDCLNLIARLPPVASYVYRRIFKDG 231

Query: 1264 KAIAADNTLDYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDP 1443
            K IAADN LDYAANFSHMLGFDDPKMLELMRLY+TIHTDHEGGNVSAHTGHLVGSALSDP
Sbjct: 232  KTIAADNALDYAANFSHMLGFDDPKMLELMRLYVTIHTDHEGGNVSAHTGHLVGSALSDP 291

Query: 1444 YLSFAAALNGLAGPLHGLANQEVLLWIKSVMEETGSNITTDQLKEYVWKTLKSGKVVPGY 1623
            YLSFAAALNGLAGPLHGLANQEVLLWIKSV+ ETGS++TTDQLKEYVWKTLKSGKVVPG+
Sbjct: 292  YLSFAAALNGLAGPLHGLANQEVLLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGF 351

Query: 1624 GHGVLRNTDPRYSCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHS 1803
            GHGVLR TDPRY+CQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHS
Sbjct: 352  GHGVLRKTDPRYTCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHS 411

Query: 1804 GVLLNHFGLTEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVA 1983
            GVLLNHFGL+EARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKK A
Sbjct: 412  GVLLNHFGLSEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKAA 471

Query: 1984 A 1986
            A
Sbjct: 472  A 472



 Score = 35.4 bits (80), Expect = 0.18
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +3

Query: 3  SASDLDLRSQLQEMIPEQQ 59
          S SDLDL+SQLQE+IPEQQ
Sbjct: 34 SPSDLDLKSQLQELIPEQQ 52
to top
>AF302906:Os02g0194100 |
          Length = 472

 Score =  787 bits (2033), Expect = 0.0
 Identities = 387/421 (91%), Positives = 399/421 (94%)
 Frame = +1

Query: 724  QDRLKKLKSEHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPEEGIRFRGLSIPECQKV 903
            QDRLKKLKSEHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDP+EGIRFRGLSIPECQKV
Sbjct: 52   QDRLKKLKSEHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPDEGIRFRGLSIPECQKV 111

Query: 904  LPAAVKDXXXXXXXXXXXXXTGKVPTKEQVDALSKELLSRSTVPGYVYKAIDALPVTAHP 1083
            LP AVKD             TGKVPTKEQVDALSKEL SRS+VPG+VY+AIDALPVTAHP
Sbjct: 112  LPTAVKDGEPLPEGLLWLLLTGKVPTKEQVDALSKELASRSSVPGHVYEAIDALPVTAHP 171

Query: 1084 MTQFTTGVMALQVDSEFQKAYDKGMPKTKFWEPTYEDCLNLIARLPQVASYVYRRIFKDG 1263
            MTQFTTGVMALQV+SEFQKAYDKGM K+KFWEPTYEDCLNLIARLP VASYVYRRIFK G
Sbjct: 172  MTQFTTGVMALQVESEFQKAYDKGMSKSKFWEPTYEDCLNLIARLPAVASYVYRRIFKGG 231

Query: 1264 KAIAADNTLDYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDP 1443
            K IAADN LDYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDP
Sbjct: 232  KTIAADNALDYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDP 291

Query: 1444 YLSFAAALNGLAGPLHGLANQEVLLWIKSVMEETGSNITTDQLKEYVWKTLKSGKVVPGY 1623
            YLSFAAALNGLAGPLHGLANQEVLLWIKSV+ ETGS++TTDQLKEYVWKTLKSGKVVPG+
Sbjct: 292  YLSFAAALNGLAGPLHGLANQEVLLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGF 351

Query: 1624 GHGVLRNTDPRYSCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHS 1803
            GHGVLR TDPRY+CQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHS
Sbjct: 352  GHGVLRKTDPRYTCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHS 411

Query: 1804 GVLLNHFGLTEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVA 1983
            GVLLNHFGL+EARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVA
Sbjct: 412  GVLLNHFGLSEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVA 471

Query: 1984 A 1986
            A
Sbjct: 472  A 472



 Score = 37.4 bits (85), Expect = 0.046
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 3  SASDLDLRSQLQEMIPEQQ 59
          SASDLDL+SQLQE+IPEQQ
Sbjct: 34 SASDLDLKSQLQELIPEQQ 52
to top
>AK120755:Os02g0232400 |
          Length = 539

 Score =  107 bits (267), Expect = 4e-23
 Identities = 97/390 (24%), Positives = 169/390 (43%), Gaps = 15/390 (3%)
 Frame = +1

Query: 844  LDPEEGI-RFRGLSIPECQKVLPAAVKDXXXXXXXXXXXXXTGKVPTKEQVDALSKELLS 1020
            +D +EGI R+RG  I E  +                      G +PT+ Q+      +  
Sbjct: 140  IDGDEGILRYRGYPIEELAE---------SSSFVEVAYLLMYGSLPTQSQLAGWEFAISQ 190

Query: 1021 RSTVPGYVYKAIDALPVTAHPMTQFTTGVMALQVDSEFQKAYDKGMPKTKFWEPTYEDCL 1200
             S VP  +   I A+P  AHPM    + +  L V         +G    K  +   +  +
Sbjct: 191  HSAVPQGLLDIIQAMPHDAHPMGALASAMSTLSVFHPDANPALRGQDLYKSKQVRDKQIV 250

Query: 1201 NLIARLPQVASYVYRRIFKDGKAIAADNTLDYAANFSHMLGF-------DDPKMLELMRL 1359
             ++ + P +A+  Y R+      I   N+L Y+ NF +ML          +P++  ++ +
Sbjct: 251  RVLGKAPTIAAAAYLRL-AGRPPILPTNSLSYSENFLYMLDSLGDKEYKPNPRLARVLDI 309

Query: 1360 YITIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVME 1539
               +H +HE    +A   HL  S + D + + + A+  L GPLHG AN+ VL     ++ 
Sbjct: 310  LFILHAEHEMNCSTAAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVL----KMLN 364

Query: 1540 ETGSNITTDQLKEYVWKTLKSGKVVPGYGHGVLRNTDPRYSCQREFA---LKYLPEDPLF 1710
            E GS    + + +++       + + G+GH V +N DPR    R+ A      +  DPL 
Sbjct: 365  EIGS---VENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLI 421

Query: 1711 QLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLTEARYYTVLFGVSRSIGIGS 1890
            ++   L +    +  +    +  +PNVD +SG++    G     ++ VLF + R  G  +
Sbjct: 422  EVAVALEKAA--LSDDYFVKRKLYPNVDFYSGLIYRAMGF-PTEFFPVLFAIPRMAGWLA 478

Query: 1891 QLIWDRALGLP---LERPKSV-TMEWLENH 1968
               W  +L  P   + RP+ V T  WL ++
Sbjct: 479  H--WKESLDDPDTKIMRPQQVYTGVWLRHY 506
to top
>AK058734:Os02g0232400 |
          Length = 284

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
 Frame = +1

Query: 1219 PQVASYVYRRIFKDGKAIAADNTLDYAANFSHMLGF-------DDPKMLELMRLYITIHT 1377
            P +A+  Y R+      I   N+L Y+ NF +ML          +P++  ++ +   +H 
Sbjct: 2    PTIAAAAYLRL-AGRPPILPTNSLSYSENFLYMLDSLGDKEYKPNPRLARVLDILFILHA 60

Query: 1378 DHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVMEETGSNI 1557
            +HE    +A   HL  S + D + + + A+  L GPLHG AN+ VL     ++ E GS  
Sbjct: 61   EHEMNCSTAAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVL----KMLNEIGS-- 113

Query: 1558 TTDQLKEYVWKTLKSGKVVPGYGHGVLRNTDPRYSCQREFA---LKYLPEDPLFQLVSKL 1728
              + + +++       + + G+GH V +N DPR    R+ A      +  DPL ++   L
Sbjct: 114  -VENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVAL 172

Query: 1729 YEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLTEARYYTVLFGVSRSIGIGSQLIWDR 1908
             +    +  +    +  +PNVD +SG++    G     ++ VLF + R  G  +   W  
Sbjct: 173  EKAA--LSDDYFVKRKLYPNVDFYSGLIYRAMGF-PTEFFPVLFAIPRMAGWLAH--WKE 227

Query: 1909 ALGLP---LERPKSV-TMEWLENH 1968
            +L  P   + RP+ V T  WL ++
Sbjct: 228  SLDDPDTKIMRPQQVYTGVWLRHY 251
to top
>AK110061: |
          Length = 1151

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 1573 KEYVWKTLKSGKVVPGYGHGVLRNTDPRYSCQ--REFALKYLP 1695
            +E+V    K  K++PG GH +   ++P Y  Q  +EF LK  P
Sbjct: 1001 REFVDSMRKGNKLIPGIGHKIKSVSNPDYRVQVVKEFVLKNFP 1043
to top
>Os04g0677700:Os04g0677700 |
          Length = 923

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = -3

Query: 1070 TGRASIAL*T*PGTVERLSNSFDRASTCSLVGTFPVKRSQRRPSGKGSPSLTAAGSTFWH 891
            TGR S++        +   ++     + +  G  PV   +   +G GS + T   STF  
Sbjct: 377  TGRLSVS--------QNSDSALKETKSTTSSGLVPVTPQR---AGNGSSTKTVGNSTFAS 425

Query: 890  SGIERPLNRIPSSGSSKDVSQS-IPVIPLIPPRTMS 786
            SG       + S+ SS   + S I V+P+I PRT S
Sbjct: 426  SGTNLKRGSLKSNNSSSLQNFSKIDVVPVIIPRTSS 461
to top
>AK106359:Os01g0201900 |
          Length = 641

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -3

Query: 932 GSPSLTAAGSTFWHSGIERPLNRIPSSGSSKDVSQSIPVIP 810
           GSPSLT+ GS      +    +R     SS   S S P++P
Sbjct: 460 GSPSLTSHGSAALRQNLPYVWSRYSDPSSSSTASPSAPILP 500
to top
>AK073519:Os01g0815700 |
          Length = 950

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 1811 NTPL*ASTLGHGFFTLPNSVRIGGTTSYNLETSWKSGSSGKYFNANSLW 1665
            N P   S+      T  N+      +SYN  ++W S SS   +N+NS W
Sbjct: 766  NNPYYNSSTWSSNSTYSNNAAWSSNSSYNSNSAWSSNSS---YNSNSAW 811


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 68,412,764
Number of extensions: 1601721
Number of successful extensions: 3875
Number of sequences better than 10.0: 8
Number of HSP's gapped: 3866
Number of HSP's successfully gapped: 10
Length of query: 769
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 661
Effective length of database: 11,075,427
Effective search space: 7320857247
Effective search space used: 7320857247
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top